>input_sequence_67657
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-CCAAGCCGCACACGCCACGGGCCGCCGAGGAGAAACGATATTCCAGCCTTCCCCGCCCCGGCACACCATCGCGCCTC--
-------TCCGCATGGCCGCCGCACGCGACCTTGCCGGCAACCAGCCCGGATCCACCCGCGTCTGCGTCGGGGAAGACGT
CGCCTTGTCGGACGTCACAGGCGTCTACGACCGCGACGACTCCCTCAAGGAGAACACCAACCCTAAATGCATCATCGTCA
AGAACTGCCCTGGCCACAAGGCCGGCAACGGCGCGGCGCAGCGGTTCCCGGGCAACCTGAAGCCTACGGCGGCGCCCATC
ATCGGGATCTCCGGAAACCTCGGCCAGGGGTGTGCCCGGCGGCACCGCCCACCTGCGATGTTCCCAAAGAATGCCAAGAC
CGGCGGCGGCGGGCGCAACCCGAAGCCGGCGGTGCCGGAGCCGGGGTCGCCCAAGGTGTCCTGCATGGGGAAGGTTCTAT
CTGGACGAGAGCGCGACCGCTGCCGGGAGCTATCTGGACGAGAGCGCGACCGCTGCCGGGAGCTGATCTCCCCGGAGAAG
ATGAAGGGCGGCTGCTGCCCCTGGTTCGGTTTCCCGATCCGTCGCAGCCGCTCGAGGAAGA-------------------
--------------------------------------------------------------------------------
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--------GGATGGACGCTTGGCGAGATCTGGGCCGTTGTAGCGCGTGTAGGGCTGGTGATGGTGAATACTACTCGAAAA
CTTGCAGTAGATGACAGTCTGGTTCGTGGCTTTCTCTTGGTTGTTGCTATGCTTTCAGAGTAGGCGTGTAGATTTGCCAG
AAAAAAAAGCGTGTAAGATGAGGATTGAGTTTGAGGTACCATGTAGATAATG-AATTAGGACTCAGAGA-----------
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-----
>chr5A_1_TraesCS5A01G128000
ATCTTTTGCCTCCGTTTCAAAAAAAATGATTTTACATGTATATTTCATGTGGCGTGTGCTGTGATTTGAGTATGCGTTCA
TCCAAGATGGATTAGATGGGCAAAAGAGCAGATTGGTTCTAGGGTTTAAAGAGGGATTTAAAGGTCGTTCCTTTTCCATC
TAATTTTGCTGAAGACCGACAGGAGAAACATACGTACTGGTCAAATAGGGTGTGGAAATGTAAATTTAGTTGAAATGGAC
AACAATGTGTTAACTGATCCATCAAGTTAATGTTGATTTACCTTTGCATATAACTGAATGTATGGATTGCATGAGTAAAC
TGAATTTTTATCAGTTTACACATAACAGAATTTGTGGACAGATTTAGTTGATAGTTATTTATGGATTGATGATTTTCTGA
GATTCGTTATAAAGCTACAGGATTTATGCAAAAACCGCCACACGCCAACCGCTGACACTGGGCCCCACGAGTTAGGATTC
AGCGCCAGATGTGATTTGCACCGTATGTGCTCACAGAGACAAGTTTTGACATCACTTTTTCATATTTTGCAGTCAGACAT
CAAACTGCACATCCTAAGCAACTGC-------------GCATTTACCTCTATAAAAGAAGGGGCCAAAAAGCGTGTTTCG
AGATTGATTTTGTAAACCTGATGACCGTCGTCGATCTCAAGGTTGTTCGGCGCCAATAACAAGTTACCAACAGCTGCTTC
CATATAATAATTT-----TTAAATATCACCCGCAAAGAAAAATATCAACAACACC--TGGTAATATTATATATAATCGCT
TCGGAGTTCTGTCGTGGTTTACAACCTCGTCCTCTTATGGAACGAGGGTAATGAACTTATTTATGCCATGATTGAGAATA
ATTTGAAAAG----------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------GACAAACATAGAGGCCCAAAACTTTCGTCGCACGAAAATTGGGGTTGAA
CCACCTAAGGCAAAGAAAAGGAGAAAATGACACATACGCTCCTCGCGATCACAACAGCCCAACAGCACAAACTCCTGTAA
ACCAAGCCGCACACGCCACGGGCCGCCGAGGAGAAACGATATTCCAGCCTTCCCCGCCCCGGCACACCATCGCGCCTC--
-------TCCGCATGGCCGCCGCACGCGACCTTGCCGGCAACCAGCCCGGATCCACCCGCGTCTGCGTCGGGGAAGACGT
CGCCTTGTCGGACGTCACAGGCGTCTACGACCGCGACGACTCCCTCAAGGAGAACACCAACCCTAAATGCATCATCGTCA
AGAACTGCCCTGGCCACAAGGCCGGCAACGGCGCGGCGCAGCGGTTCCCGGGCAACCTGAAGCCTACGGCGGCGCCCATC
ATCGGGATCTCCGGAAACCTCGGCCAGGGGTGTGCCCGGCGGCACCGCCCACCTGCGATGTTCCCAAAGAATGCCAAGAC
CGGCGGCGGCGGGCGCAACCCGAAGCCGGCGGTGCCGGAGCCGGGGTCGCCCAAGGTGTCCTGCATGGGGAAGGTTCTAT
CTGGACGAGAGCGCGACCGCTGCCGGGAGCTATCTGGACGAGAGCGCGACCGCTGCCGGGAGCTGATCTCCCCGGAGAAG
ATGAAGGGCGGCTGCTGCCCCTGGTTCGGTTTCCCGATCCGTCGCAGCCGCTCGAGGAAGA-------------------
--------------------------------------------------------------------------------
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--------GGATGGACGCTTGGCGAGATCTGGGCCGTTGTAGCGCGTGTAGGGCTGGTGATGGTGAATACTACTCGAAAA
CTTGCAGTAGATGACAGTCTGGTTCGTGGCTTTCTCTTGGTTGTTGCTATGCTTTCAGAGTAGGCGTGTAGATTTGCCAG
AAAAAAAAGCGTGTAAGATGAGGATTGAGTTTGAGGTACCATGTAGATAATG-AATTAGGACTCAGAGATA---------
--------------------------------------------------------------------------------
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----------TGTGACCTAGATTGGCAGATGATACAAATTTCAGCTTCGTCTACTCTATCCCGGAGATGTGTGAACATTC
AATTATATATTTTTCTCATCACTTTGTATCGGTTCAGCTATTTAAGCTTTATATATAAAGCTGAATGAAACGTGTTTAGA
GGATG--------------------------------------AGGGGTTAACTATACCATGACAGTCATATAC------
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--------GAGCTAGTGGTTTTGATGAAGATTTGAATTCTATCCAAGAGAAGACAACTCGATATGTTAATTTACTTTATG
AGAGTCGTACTTGGGTCGACAAACCCCCTATCCTTTTGTCAATTCTTTTATACTCCCTCCGTCCCAAAAAACAAAAAAGA
GAAACAAGCTTCCTTCAAAAAAGAACAAGAGAATCAATCTATGAAACTGAGAAAGAGAAAACGCAAGAGCCCCATGTGCA
GGGCGGCGAGCACCTTGTCTTTTTT--TTTTCTATAA-----ATTTTTTTT-AATAATTCGGGATTTCAGAAA-AAGTTG
CTAAATTGTTGAATTGTTCATGATTTGAAA-------------------AATGTTCAGGAAATGATAAATGCTCACAGAT
TCAAAAAA-TGTTTGCAATTTCAAAAATAATGTTTGTCTGGTCAGT-TTTTTTACAGTTTAAAAAATGTTCATGATTTTC
TAGGAAAATGTTCACAATATTAAAAGAA-TATTCGAG--------------------AATTTTGAAAAATGTTCACCAAA
TTCAGAAAAT----------GTTCACGTTTTCCAGAAAATGTACACAATTTCTAGGAATGTTC-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------GTGAATATGAAAACTGTTCATGATTCAGAATAATCTTCACG
AATTTAAAAAATGCCTAGGATTTTTC---AAAAAAGTTCACGATTTC-AGAAATATTCATGATTTTGAAAAGATGTTCAC
TTTTTCC--AAAAATGTTCACGAATTTCCTACA-ACTGTTCGTCAATGCAAAAAACATG-TTCCCGGATTTGT-AAAAAA
-TGTTCGGTGGTTTGAAAAATGTA------------------CACAATTTGAGAAAACTTGTTCGCAAATTTGAAACATG
GCTGA
>chr5A_27
--------------------------TGATTTTACATGTATGTTTCATGTGGTGTGTGATGTGATTTGAGTATGCGTTCA
TCCAAGATGGATTAGATGGGCAAAAGAGCATATTGGTTCTAGGGTTTAAAGAGGGGTTTAAAGGTGGTTCCTTTTCCATC
TGATTTTGCTGAAGACCGACAGGAGAAACAT-CGTACTGGTCAAATAGGGTGTGAAAATGTAAAGTTAGTTGAAATGGAC
AACAATGTGTTAACTGATCCATCAAGTTAATGTTGATTTACCTTTGCATATAACTGAATGTATGGATTGCATGAGTAAAC
TGAATTTTTATCAGTTTACACATAACCGAATTTGTGGACAGATTTAGTTGATAGTTATTTATGGATTGATGATTTTCTGA
GATTCGTTACAAAGCTACAGGGTTTATGCAAAAA-CGCCACACGCCAACCGCTGACACTGGGCCCCACGAGTTAGGATTC
AGCGCCAGATGTGATTTGCACTGTATGTGCTTGCCGAGAAAAGTTTCGACACCACTTTTCCATATTTTGCAATCAGACAT
CAAACTGCACATCCTAAGCAACTACATATACCACCAGTGCATTTACCTCTATAAAAATACGGGCAT--AAGCCTGTTTCG
AGATTGATTTTGCAAACCTGATGACCGTCGTCGATCTCAAGGTTGTTCGGCGCCAATAACAAGTTACCAATAGCTGCTTC
CACATAATAATTT-----TTAAATATCACCCGCAAAGAAAAATATCAACAACACC--TGGTAATATTATATATAATTGCT
TTGGAGTTCTGTCGTGGTTTGCAATCTCGTCCTCGTATGGAACGAGGGTAATGAACTTATTTATGCCATGATTGAGAATA
ATTTGA--------------------------------------------------------------------------
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-----
>chr5B_307
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------------------------------------------------------------------TTGCATGAGTAAAC
TGATTTTTTATCAGTTTACACATAACAGAATTTGTGGACAGATTTAGTTGATAGTTATTTATGGATTAATGATTCTCTGA
TATTCGTTACAAAGCTGCGGGGTTTATGTAAAAA-CGCCACACACCAACCGCTGACACTGGGCCATGAATCAG-------
-------GACGTAATTTGCACCGTATGTGCTCGCAGAGACAAGTTTTGACACCATTTTTCTGTATTTTGCA-----ACAT
CAAACTGCACATCCTAAACAACG-CATGTACCATCAGTGCATTTACCTTTATAAAAAACGGCGC---AAAGCCTGTTTCG
AAATTGATTTTGTAAGCCTGATGACCGTCGTCGATCTCAAGGTTGTTCGGCGCCAATACCAAGTTACCAACAGCTGCTTC
CATATAATAACCT-----TAAAATATCACCGGCAAAGAAAAATATCTACAACACC--TAGTAATAT----TATAATCGCT
TCGGAGTTCTGTCGTCATTTACAACCTCGTCCTCGTATGGAACGAGGGTAATGAACTTAGTTATGCCATGATTGAGAATA
ATTTGAAAAACGAAATTGCTTCACACACGATACACATGAACGATCTGCGAACGATGCCTTCTCTACGAATCAGCTAAAAA
AACAAAACCAATCGCCTCCTGCGTTCACGGACGCGGTTGGAGCTGCCACATGGGATCGTCCATGAGTCGGCTGCTGGGTT
GTCGTGTGTATAGCAGCGCCGTTTGAAAAATGACAAGCATAGAGGCCAAAAACTTTCCTCGCACGAAAATTGGGGTTGAA
CCACCGAAGGCAAAGAAAAGGAGAAAATGACACATACGCTCCTCGCGATCACAACAGCCCAACAGCACAAACTC---TAA
ACCAAACCGCATACGCCACGGGCCGCCGAGGAGAAACAATATTCCAGCCTTCCCCGCCCCGGCACACCATCGCGCCTCTC
CACCCTCTCCCCATGGCCGCCGCACGCGACCTTGCCGGCAACCAGCCCGGATCCACCCGCGTCTGCATCGGAGAAGACGT
CGCCTGGTCGGACGTCACAGGCGTCTACGACCGCGACGACTCCCTCAAGGAGAACACCAACCCAAAATGCTTCAATGTCA
AGAACTACCCCGGCCACAAGGCCGGCAACGGCGCGGCGCAGCGGTTCTCGGGCAACCTGAAGCCTACGGCGGCGCCCATC
ATCGGGATCTCCGGAAACCTCGGCCAGGGGTGTGCCCGGCGGCACCGCCCACCTGCGATGTTCCCAAAGAACGCCAAGAC
CGGCGGCGGCGGGCGCAACCCGAAGCCGGCG-TGCCAGAGCCGGGATCGCCCAAGGTATCCTGCATGGGGAAGGTCCTAT
CG---------------------------------GGACGAGAGCGCGACCGCCGCCGGGAGCTGATCTCCCGGGAGAAG
ATGAAGGGCGGCTGCTGCCCCTGGTTCGGTTTCCCGATCCGTCCCAGCCGCTCGAGGAAGAGCGCCGTGGAGAGCGTCGA
CTGGTCTCCGCCTCCCAGGCTGCCTCTGGCCTATGTGGAGCGTAAGATGGAGGCGAAGGAGGTCAGCACGGATCAGGCAG
CGCCGCCCGCGCCGGCGCCGGCGCTGGCAGGGATGAGGCGGTTCGCGTCTGGTAGGCGCGTGGCGGATTGGGCGGCCGGG
ACGGAAGAGGATGGACGCTTGGCGAGATCTGGGCCGTTGTAGCGCGTGCAGGGC------TGCTGAATACTACTCGAGGA
CTTGTAGTAGATGACAGTCTGGTCCGTGGCTTTCTGTTGGTTGTTGCTATGCTTTCAGAGTAGGCGTGTAGATTTGCCAG
--AAAAAAGCGTGTAGGATGAGGATTGAGTTTGAGGTA------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------AGGGGTTAACTACACCATGACTGTCATATACTATCTT
TATCTTGGTTTACTGGTCCCCGTTGTAATCAGTGTCGAATTTTAATCATAAATTTAACTAGCAAAATGTTCATGCATGTT
ATAAAAAATTATATCATTGAAAACTACGTTCAAATACGAACCCAACGATATAATTTTTGTAAACATCCACTAACATTTTG
TCAGTTAAATCTTTGATTAAAATTTAGCACAAATTACAAAGGGG-CCAATAAACCAGGACGGAGGTATCTCTACTCCTAA
TGGAGCAGTTGGTGAATAGTCTCCACGGTTTATTTTCGATGGGTTTTTTTCTCTCTCCTCCCACCACCTCCTCCCATCCT
GGTCCATCGGTTTATTTTTCTCTCCACTCTTTATTACAACCAGGATTTTTCTAACGTATAACAAATCACGGATCTAACTT
TCTTAAATTATTCATATCAATCGATTCCTTTTATTAGTTCAATTTGTCTTAGAAAACAAATAACAAACTTTTAAGAAACA
AATAATAGATTTGAATCTAACTTATCTAAATCAATCGATTTCTCTCATTAGTGAAATTTATTTTAGGAAACAAATAATAG
ACACGTTACAAACTTTTCTCCCAATAAATAGTTTCTTAACATTTCTAAACTTTCCTAATCAGACACGTCACAAACGGGCA
GGTACTGATATCATGTTACCAAACAATAAAACCCCATTTGCATAGAAATCAGTTCAAAATCCTAACTTTCCTAAATTTTT
ACCTTTCCTTGATAACATCCAATATTTTCTATGTTTTCCACCTATTGAAGAAAATCACCCCTCCATCGATATTAGCATTT
TTTTAATGAGATCTCCGGGTTATGATTTTTCTGCGATTCTTTCCAATTGTGACCTCTCCTTTCGCTCCGGCTCCTTCTCG
CATAATCACCTCCACCACAGCCAGCTGACGCCACCCTAGACCTCTTGCCTCTCCACACCTTCTCCGCCACCTCCTCCTCG
TACTCCATTGACAATCCCTCCACCAGGTTTATCCACGGCGGTGTCGACGACATGGCGCAACAGCGTACCAGTGGTAGAGC
AGCGCATAGTAGCAGGAAGAAGCACGCAGCAGGCGAGGCGAGCGCCCGACGGTGGAGGGCAGAGATGCGGCCGGCGTGGC
TAAGGGGGCGGCCGGCAGAAGATGGCTGCGACAGGAGGCGGCGCGAGGCAGGGGCGCGACAGCGGTGCGAGCGAAGGGAT
AGGCGGCAGAAGACGGGGCGAGCGCAGCCAACGAGAATGTGACGCGCGGCCAGGGTGTGCGTCGCGCGGGGCATAGTGGT
GCGGTGGCTGTGGCGAGCGTGATGGCAACGGCGGGCGCGACAGACGCGGTGTGGCACATGCGTGGGCATGAAGAGCCAGA
GAGGGAGTGGCCCCGCGGGCGCGGAAGAAGAGCTGAAGGCTCGGGCATGGGCGCGCATAGGAGCGGGAATGTGCCACGGG
GTCAATCCGAAAATCTCAGTGGCTACCCCTGCAAAGGCCATGGCGGACAGCGGTTCTCGGCCACGGCGAAATACCTAACG
AGAGCAAACGAGAGGGGAAACTGGGGAAAGGCAAGAGGAGATCACGGCGGTGTCAATGGCACCCTAGGGGAAGACAGGGG
AGCCCGGGGCGGCGCGGATCGAACGGCAATGTCGCGGTGGCCGAAGGTTGAGGAAGACACCAACGACGTCGATCTGGGGG
AGCTGGACTTGATCTCGTTGGCGCAGACGAAGTAGCAGAGGCATTCGGAGCTCCTCGACAAGCTCCTAGCCAGCAGGGAG
GGCAGTGGCCGTGTGGTGGCTGTGGCATCTAACTTCGTCCAGATCACCGGGATCGAGCGAGCGAGGAGGATAAGTGGATC
TAGGAGGGGTGTCAAGGAGGAGTGAGGCCATGGGGGCAGGGGAGGCAGGGCGTCACCCTTATCCATTCCCCTTCGATGCC
GGTGAGGTGGTCGGGCGGGAGCCCGGCTCTGTAGCGACGGGCTCGGGGAACAGGAGAAGACGACCGTGCGGGGACTGGAC
CACTGGGCCGGTTCGGTGGCAAGGCCCGAGGTAGGAGGAATCCCCTTTTTCATCGTCCTTTTGGTTTTTAATGTATTCTA
ATCTGTTTCTCCTTTTTAACACCGTTTTCTATTTATTCTTATATAAACTAAACGGATTTTGTTAATTGTGAAATTATGCA
CACAATTCAAGCACAATATTTTTAGGTGGCACAAAAAGTTTGGGGCCAAAAGGAAATACATAAAATTAGGTTTATATTTA
ATTGGTTATTTTAACTTCTGTTGGACCTCTTATTAATTTGACAAGATTTAATTTTTGGGTCAAATAATGTTGGGCTCAAC
ATTTCAAAGATCAGTGGCATTTATAGAATATGGTGGACATTTTAGTTTTACTGTTTGACGAAATAATTTATTTGACTTTA
TTTTAAATTTGAATTGGGCTTTGATTTTTATCAAGTGGTAGCTTGGCTTAGCAAGCCTGATGACATGGCATCATTAGGGG
GAGGTCACTGTAGCTAACGACTTGAGGTGTTACATAATCTTTCTATTTCTGAAATTTCATTGTTAAATGATTGGGGAATA
TATCACACTATCCATTAGTTTTGTCAAGCTCACCACAAGTCCACACATTATTGCCAATTGAGTAAGTCTTATTGGCGGGG
AGAATAGGATGTGTGTGTTAGAGAGAGAGAGGGAGAGAGAGTGAGGAAAAGGGAGGGGGAGAGAGTGTGTGTGAGAATTT
GATAGTAAAAAAGGTCGCCAATGTTGTAATATTGAATTCTTAAAGTTAATGTGGCCCCGTTGCAACGCACGGGCGTTCTT
CTAGTTAAGAGCTAGTGCTTTCGATGAAAAATTGAATTCTATCCAAGGGAAGCCAACTCGATATGTTAATTTACTTTCTG
AGAATCGTACTTGGGTCGACAAACCCCCTATCCTTTTGTCAATTCTTTTA------------------------------
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>chr5D_620
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------------------------------------------------------------------------GTGTTTCG
AGATTGATTTTGTGAGCCTGATGACCGTCGTCGATCTCAAGGTTGTTCGGCGCCAATACCAAGTTACCAACAGATGCTTC
CATATAATAATCTTAAAATAAAATATCACCCGCAAAGAAAAATATCTACAACACCTATAGTAATAT----TATAATCGCT
TCGGAGTTCTGTCGTCGTTTACAACCTCGTCCTCGTATGGAACGAGGGTAATGAACTTATTTATGCCATGATTGAGAATA
ATTTGAAAAT----------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------GACAAACTCCTCT------AACTTTCCTCGCACGAAAATTGGGGTTGAA
CAACCGAAGGCAAAGAAACGGAGAAAATGACACATACGCTCCTCGCGATCACAACAGCCCAACAGCACAAACTCCTCTAA
ACCAAGCCGCACACGCCACGGGCCGCCGAGGAGAAACGATATTCCAGCCTTCCCCGCCCCGGCACACCATCGCGCCTCTC
CACCCTCTCCCCATGGCCGCCGCACGCGACCTTGCCGACAACCAGCCCGGATCCACCCGCGTCTGCACCGGAGAAGACGT
CGCCTGGTTGGACGTCACAGGCGTCTACGACCGCGACGATTCCCTCAAGGAGAACACCAACCCTAAATGCTTCATCGACA
AGAACTACCCCGGCCACAAGGCCGGCAACGGCGCGGCGCAGCGGTTCTCGGGCAACCTGAAGCCTACGGCGGCGCCCATC
ATCGGGATCTCCGGAAACCTCGGCCAGGGGTGTGCCCGGCGGCACCGCCCACCTGCGATGTTCCCAAAGAATGCCAAGAC
CGGCGGCGGCGGGCGCAACCCGAAGCCGGCGGTGCCGGAGCCGGGATCGCCCAAGGTGTCCTGCATGGGGAAGGTTCTAT
CG---------------------------------GGACGAGAGCGCGACCGCCGCCGGGAGCTGATCTCCCCGGAGAAG
ATGAATGGCGGCTGCTGCCCCTGGTTCGGTTTCCCGATCCGTCGCAGCCGCTCGAGGAAGAGCGCCGTGGAGAGCGTCGA
CTGGTCTCCGCCTCCCAGGCTGCCTCTGGCCTATGTGGAGCGTAAGATGGAGGCGAAGGAGGTAAGCACGGATCAGGCAG
CGCCGCCCGCGCCGGCGCCGGCGCTGGCAGGGATGAGGCGGTTCGCATCTGGTAGGCGCGTGGCGGATTGGGCGGCCGGG
ACGGAAGAGGATGGACGCTTGGCGAGATCTGGGCCGTTGTAGCGCGTGTAGGGC------TGGTGAATACTACTCGAAGA
CTTGTAGTAGATGACAGTCTGGTTCGTGGCTTTCTGTTGGTTGTTTCTATGCTTT----------GTGTAGATTTGCCAG
--AAAAAAGCGTGTAAGATGAGGATTGAGTTTGAGGTACCATGTAGATAATAAAATTAGGACTCAGAGATACTCCCTCCG
TTTCATAATGTAGTGCCTATAGATTTTTTGAAAAGTCAAATCTCACAAACTTTGACCAAGTTTGTGGAGAATTTTTTTTA
CATCTAGAGTATGAAACATATATCACTAGATTCATTGTAAGATGTAGTTTCACATTATATATTTTTGCTTTTGTAGATAT
AAATATTTTTCTCTACAAACTTGGTCAAAGTTTACAAAGTTTGACTTCTCAAAAAATCTATAGGCACTACATTATGAAAC
GGAGGGAGTATGTGACATAGATTGGCAGATGATACAAATTTCAGCTTCGTCTACGCTATCCCGAAGATGTGTGGCTGTTT
AATTATATA-TTTTCTCATCACTTTGTATCAGTTCAGCTGTTTAGGCTTTATATATAAAGCTGAACGAAACATGTTTCAA
GGATGATGGTATCTTGGCAAAGAAATCCTATCAGTCGGAGGTAAGGGGTTAACTATACCATGACTGTCATATACTATCTC
CATCCTGGTTTATTGGTCCTCATTATAATCAGTGCTTAATTTTAACGATAAATTTAACTAATAAAATGTTCATGCATGTC
ATCAAAAATTATATCATTAAGAACAATGTCCAAATACAAAATCAGCAATATAATTTTTGTTGACATGCACCAACATTTTG
TCAGTTAAATCTTTGATAAAATTTTAGCATAAATTACAAAGGGAACCAATAAACCAGGGTGGAGGTAG------------
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-----TAACAGCTAGTGGTTTCGATGAAGATTTGAATTCTATCCATGGGAAGCCAACTCGATATGTTAATTTACTTTCTG
AGAGTCGTACTTGGGTCGACAAACCCCCTATCCTTTTGTCAATT------------------------------------
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>chr1D_2242
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----------------------------------------------------------------------CCCATGTGCG
GGGAGGGGAGCCCCTTGACTTTTTTCTGTTTTCATATTTTTTATTTTCTAAAAATAATTCGGGATTTCAGAAA-AAGTTG
CTAAATTGTTGAATTATTCGTGAGTTCAAAGATCGTTCGGGATTTGTAAAATGCTCAGAAAATGATAAATACTCACAGAT
TCATAAAA-TGTTTGTAATTT-AAAAATAATGTTCGTCTATTCAGT-TTCTTTACAATTTAAAAAATGTTCACGAATATT
TAGGAAAACGTTTACAATATTAAAA-AA-TGTTCCC---------------------AAATTTTAAAAATGTTCACCAAA
TTAAGAAAATTTAAAACAATGTTCACG-TTTCCAGAAAATGCACACAATTTCTAGGAATGTTC-----------------
--------------------------------------------------------------------------------
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---------------------------------------GTTAATAT-------------------GAAAAATGTTCATG
AATTTAAAAAATATGTAGGATTTCAAAAA----ATATTGACGATTTCATGAAATGTTCATGATTTTGAAAAGATGTTCAC
TTTTTCGA-A-AACCATTCACGAATTTCTGAAA-ACTGTTCATCAATTC------------------------AAAAAAA
-TGTTCGGAAATTTAAAAAATGTTC-------------------------------------------------------
-----
>chr1D_2242
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----------------------------------------------------------------------CCCATGTGCG
GGGCGTGGAGCACCTTGTCTTTTTT--GTTTTCATCTTTTTA--TTTTTTTAAATAATTTGGGATACCAAAAA-AAGTTG
CTAAATTGTTGAATTGTTCGTGATTTCAAA-------------------ATTGTTCAGGAAATGATAAAGGCTCACGGAT
TCAAAAAACTGTTCACAATTTCAAAAATAATG-TCGGCTATTCATT-TTTTTAACAATTTAAAAAGTGTTCATGAATTTC
TAGGAAAATATTCACAATATTAAAG-AA-TGTTAGAG--------------------AATTTTGAAACATGGTCACTAAA
TTCAGAAAATTTCAAAAAAAA-TCAGGTTTTCCAGAAAATATACATAATTTCTAGGAATTGTCAGCAGCTGGCCCAAGGT
GACCTACTGGGAAATGAAAAAACAATTGGTTCAATCGAGTACTTATATTGTTATGTTTACCTGGAATGCCATAAGCCTGC
TCTTAAGGAACAACTCAAATCACTGCTGACGCGGGACTTGCTTTCGCACGGGGAGTTGGATAAATTACCCTCTTGTGGGT
ATGGCGATAGATAGCAATAGCAACGGATTGATTATGGTTGTGAATATGAAAAAATTTCATGATTCAGAAAAATGTTCACG
AATTAAAAAAATGTCTAGGTTTTCAAAAAAAAAATGTTCATGATTTCCAGAAATGTTCATGATTTTGAAAAGATGTTCAC
TTTTTCC--A-AACTGTTCACGAATTTCCCATG-ACATTTCCACAATTCAAAAAGAAATATTCGCGGATTTGTAAAAAAA
-TGTTCGGCAGTTTAAAAAATGTA------------------CACAATTTGAGAAAAAATGTTCGCAAATTTGGAACATG
GC---
>chr4D_2287
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------------------------------------------ATTTTTTTAAAATAATTCGGGATTTCAGAAAGAAGTTG
CAAAATTGTTCAATTGTTCGTGATTT-------------------AAAAAATGTTCAGGAAATGATAAATGCTCACGGAT
TCAAAAAA-TGTTTGCAATTTCATAAACAATGTTCGGCTATTCAGTGTTTTTTACAATTTAAAATTTTTCTA--AATTAC
TAGGGAAATGTTCACAATATTAAAA-AAATGTTCGAGAATTTCGAAAAATGTTTAAAAAAATTAAAAAATGTTCACCAAA
TTCAAAAATTTCAAAAC---------------------ATCTACACAATTTCTAGGAATGTTC-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------GTGAGTAGGAAAAAAATTCAGGATTCAGAAAAATGTTCACT
AATTTAGGACATGTCTAGGATTTCAAAAGAAAAATGTTCACAATATCAAGAAATGTTCATGATTTTGAAAAGATGTTCAG
TTTTCG--AA-AAATATTCATGAATTTCTAAAA-ACTGTTCATCAATTC------------------------AAAAAAT
TTGTTCGGCAATTTGAGAAATGTTCCACTTTTGAAAAATGTTCACAATTTGAGAAAAATTGTTCGCAAATTTGACACATG
GC---
>chr2A_2296
--------------------------------------------------------------------------------
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----------------------------------------------------AATAATTCAGGATTTCAGAAA-AAGTTG
CTAAATTGTTGAATTATTCGTGAGTTCAAAGATTGCTCGTGATTCAAAAAATGTTCAGGAATTGATAAATGCCCACGGAT
TCAAAAAA-TGTTCTCAGTTTCAAAAATATTGTTCGGCTATTCAGT-TTTTTTACAATTTAAAAAATATTCATCGATTTA
TAC-AAAATGTTCACAATATTAAAA-AA-TGTTCGAG--------------------AATTCTACAAAATGTTCACCAAA
TTCAAAAAAATTCAAAAAATGTTCACGTTTTCCAGAAAATGTACGCAATTTCTAGGAATGTTC-----------------
--------------------------------------------------------------------------------
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---------------------------------------ATGAATATGAAAACTGTTCCTGATTCGGAAAAACGTTCACA
AATTTAAAAACTGTCTAGGATTTCAAAAACC-AATGTTCCCGATTTCAAGAAATGTTCACGATTTTGAAAATATGTTCAC
TTTTTCAAAA-AAATGTTCACGAATTTCCAAAACACTGTTCATCTATACAAAAATTATTA-TCGCGGATTTGT-AAAAAG
-CGTTCAGCAATTTGAAAAATGT---------------------------------------------------------
-----
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSS---------------S----------S-----S---------------------
------------------------------S------------------------S---------S--------------
-S-----------------------------S----------------------S---------S---------------
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---------S-----------S------------S---------------------------------------------
--------------------------------S------------------S-------S-----------S--------
-----------------------S--------------------------------S-------SSS-------------
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----------------------------------S---------------------------------------------
---------S----------------------------------------------------------------------
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-----------------------------------------------S---------S----------------------
-----S----------------------------------------------------------------------S---
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----------S-------------------------------------------------------S----S--------
-----S----------------------------------------------------------------S---------
------S---S------------------------------------S--------------------------------
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---------------------------------------------S----------------------------------
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------S--------------------------
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------------------------------------------------------SSSSSS------------------S-
----S------------------------------S--------------------------------------------
SS-------------------------------------------------S----------------------------
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----------------S-------------------------------------S--------S---------SSSS--S
---------S--------------------S--------S----S--------------------S-----S-----SS-
----------------------------------------------------------------S---------------
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---------------------S-------------------------S----S------------------------S--
--------------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------S
------S--------------------S---SS---S-------------------------------------------
-------------------S------S-----------------------------------------------------
----------------------------------S----SS---------------S------------------S----
-------------------------S----S-------------------------------------------------
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---------------------------------------------------------------------S---S------
-------------S---------SSS--------S-------------------S-------------------------
----------S------------------S-S---------S-----S------SS--S----S----------------
--------SS-----------------------------------------------S----------------------
--SSS
>forward_1197
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---------------------------------------------------------CCCAACAGCACAAACTCCTG---
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>reverse_5737
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--------------------------------------------------------GAAAACGCAAGAGCCCCATG----
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