>input_sequence_67655
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-------------------------------------ATGGAGGACTCGGTGGGCGAGGCGGAGAGGAGGGAGCAGGAGG
AGACCATGGCGCAGGGGAAGAAGCGCGGGCGAGAGGAAGAGCAGGAGGCCGGCGCTGGTCGTGTGGTGGAGGGGAAGGCG
GAGGTGGCGGTGGCTGAGGAGGGTGGGTTTCTCAGCAGCATGGCGTCCAAGATCGGCGTGGCCATGTCGGGTGCTACTAA
CGGCA------GCGGCGGCGCTGAGGACACCGGCGAAGGCAATGGCAACGGCAACGGGAGCGCGCTTGCTGTCTCTGACG
GCGACGAGGAGAAGGCGGCCGGCAATGGCATCTTCCACAAGCTCCTGTCCAGCTCGTCTCCTTCCCCACCGGTCACAGGT
AAGTTACTGCGCTTTTA-----ATCTTTGTCGCCCACTCTCTGAAACTTTACTGTAATTGACAGTCTTCCGTGGAACAGA
GGAAGAGAGAAGGGGAGGGAAAGACGAGGACGAAGGCGGCGAGCAGGCCGGGATACTAAGCGCCATGGCTTCCAAGATTG
GCATGGCCATGTCCGGCAATGGGACTCACGGCGGCAGCGGGGAAGATGTTGATCACAGTAAAGGTGAGGGTGAGGACAAG
G---AGGAGATGGGAGGCGACGAGCCGA------ACGGCGGTGGGATCGTTAAGCAGATCATGTCCAACCTCCCCACATC
AGGTGCACTGCCAATCTGCTATTTTCAGTTCCACCATATCCTCGTG-TGTCGCCTCGATTGTTTCAGCTGACAGGATTTG
TTCTTCTCTGT----TTTTTTTGCCTCACTGCAGACACTCGGGGGCCCGATGCTGAGGAGGCCTCCCTGCTCATCTCCAT
CATCGACGACTAG-------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------
>chr4D_1_TraesCS4D01G192300
CTAATCAAACGCTGTGTGTGAGGGTGGAGGGGCCGGGGGCTGTTTCAAATATTTTCACGAGTTGGACATGATGATTTTCA
CGACATCAGCGCCGCGGAATCGGTTTTCACCTGGGAGCTGGCGATGCGATCATATCGCAGGCGCCTCTGCTCATCGCTTT
TGTACGATCGTATTGACAGTTGCGTTGGCGCCGGAGATGTGATGCTTGACAGTT-GCAGTATTACGAGGAGAAA----AT
GCATGCTGTC--------------------------------TCAGCGTCTCGTGTTGGTTTCAGAGAAGAAGGGAGAAG
AAGCACC-------------------------------------------------------------------------
------------------------------------GAGCAT--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------TTTGTGGTTTGGCGTGTAACGTTTTGTACTACTGAGTCAGT
AAGCCACTTGGG--------------------------------------------------------------------
-------------------AAGATACGAAGTTAAATCCAGGAAAAGAAACAGCATCT-----------------------
--------------------------------------------------------------------------------
---------------------CTCGTGCGGTACTTGTCTTATG----CTTCCAACGCTGAGCACCGAGCAATGCCGCTTG
ACACACACTCTAGACTCCCAAAGCAGCATCTCTCCTGTGGATACACATGGCACCAGCAATACGAGCATCAGATGCAGCA-
------------------CACAGAGTTGCACTTCCCATCCCCGGGACACGTGAAGACCGACCGACCCCGACGCCCAGTT-
---CCCATGGAGTAAAGTACTACTACTACAGTTTGGACG-----CTCTCCGTCCCAGGCATTCCCACCGACAACCCCTGC
GATCCACCGGCCACCGCGCCGTGGGCACGTCGCTGCCTCCGGGCCCCGGCCGGAAATTCTACGTGCACAAAATCGAGAAG
CGGAAAAACAAAAGCGCAGCCCACAAAGCGACCTTAAAA-TATCGCGGCAACGGCCGGCCAATCACCGCGCGCCAGGCTA
CGCGGATCGAGGCCAAGCACGCGAGGGGCCGCCATGGTGGCCATCTCCACAGGACGCGTGTCCGCCAGC-------CGCC
TATATATCCCTCCTGCGGCACGGCTCCTGGAAGATAATACTAGTACTATCTGATCTGTTCCTGCCTTTCCTGCAGTGGTA
GCGCACACACTTTGGTGAGCTTAGTTCGTTC---GTGATGGAGGACTCGGTGGGCGAGGCGGAGAGGAGGGAGCAGGAGG
AGACCATGGCGCAGGGGAAGAAGCGCGGGCGAGAGGAAGAGCAGGAGGCCGGCGCTGGTCGTGTGGTGGAGGGGAAGGCG
GAGGTGGCGGTGGCTGAGGAGGGTGGGTTTCTCAGCAGCATGGCGTCCAAGATCGGCGTGGCCATGTCGGGTGCTACTAA
CGGCA------GCGGCGGCGCTGAGGACACCGGCGAAGGCAATGGCAACGGCAACGGGAGCGCGCTTGCTGTCTCTGACG
GCGACGAGGAGAAGGCGGCCGGCAATGGCATCTTCCACAAGCTCCTGTCCAGCTCGTCTCCTTCCCCACCGGTCACAGGT
AAGTTACTGCGCTTTTA-----ATCTTTGTCGCCCACTCTCTGAAACTTTACTGTAATTGACAGTCTTCCGTGGAACAGA
GGAAGAGAGAAGGGGAGGGAAAGACGAGGACGAAGGCGGCGAGCAGGCCGGGATACTAAGCGCCATGGCTTCCAAGATTG
GCATGGCCATGTCCGGCAATGGGACTCACGGCGGCAGCGGGGAAGATGTTGATCACAGTAAAGGTGAGGGTGAGGACAAG
G---AGGAGATGGGAGGCGACGAGCCGA------ACGGCGGTGGGATCGTTAAGCAGATCATGTCCAACCTCCCCACATC
AGGTGCACTGCCAATCTGCTATTTTCAGTTCCACCATATCCTCGTG-TGTCGCCTCGATTGTTTCAGCTGACAGGATTTG
TTCTTCTCTGT----TTTTTTTGCCTCACTGCAGACACTCGGGGGCCCGATGCTGAGGAGGCCTCCCTGCTCATCTCCAT
CATCGACGACTAGACTAGCAGTAGATAGATTTGGCACTTGTTATTCCTGGGTGTAGTTTTACATCGCCCAGCGTGCCCCC
TTCCTTGATGCTGATGTTGTAAC------------------------------------------------------ACA
TGTTTGCACCTTGATAAGTGTTCTGGCCTGTAACCGCATTGACT------GAGAACTGGTCCTCCTCGCTTATTATAGTT
GC---TACTCCTTGGAACGTGAACATGTGGTGGAAA--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------GAAGTGAAATAAGAATTATAATATGGAAA-------------------
--------------------------------------------------------------------------------
----------AACCAAGAAATTATA---TTTTTTTAGAAAAGAAGGATTACCAAGAAAATGAGATGAGCCTACTAAACCG
GAAAGG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------AGGAAATATAATAATGCTATTATTACTTTGTCAGCCTACTAGGCTACAAGACCGGACAGGTTTGAAGTCAC
TGCTGTGGTATGCAAACTGTAAGCACAAGTAAAAAGTCAAATAGAGTCCTCTGAAACCATTCCAAACAATGGACAACAGA
CACAGATACAAGACACATATGTTAAAGCGACTTCTCTGAAGCAAAGATATAAGATATACCGCTGCTAGTGACGGCACAGA
TGAAAACAGATGTTTTAATTTGCATTTGAACTACATATTTCCCTTACCGCAGTGCTGTCCCCAAAATCGTGTCGTCATGG
CATTTGGCAGAGCAAAATCCTGGGAGGAAGAAATGCAGCTAGCTACGAGATAGC--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------ATAAGTCAAAATGCGTATACCACATGCCATGACATCAAACAGGCTACAGACTGGAGAAACAATGTAGCTACTCA
GTGCGATGGA--------------------TAGGTCACACCATCTCTGAGTACAGACATGCCAACGACTGAATATTGCAA
AATAAACCAAAAGTTGTTCGGCCAATGCTGAATCCTGCTAATGCTTGCTAGAAAGACAGCATCACTCAATTTATAGGATG
CAACGTTTCCATCACCGAT-CAGTTATATCGCTCCATGAACTTCTCAATCGCCACAGAGAAGGCACCAAAACCCACACAC
CCGATACATGTAGCTTGAGGGCCACCTGCAAGAAAAATAC
>chr4B_1
CTAATCAAACGCTGTGTGTGAGGGTGGA-GGGCCGGGGGCTGTTTCAAATATTTTCACGAGTTGTACATGATGATTTTCA
CGACATCAGCGCCGCGGAATCGGTTTTCACCTGGGAGCTGGCGATGCGATCATATCGCAGGCGCCTCTGCTCATCGCGTT
TGTACGATCGTCTTGACAGTTGTGTTGGCGCCGCACATGTGATCCTTGACAGTTTGTAGTATTACGAGGAGAAAATGCAT
GCATGCTGTC--------------------------------TCAGCGTCTCGTGTTGGTTTTAGAGAAGAAGGAAGAAG
AAGCACC-------------------------------------------------------------------------
------------------------------------GAGCAAGCCATTCGGGCAGAGAGGGAAAAAAACGAAGCTCAATC
CAGG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------GAAAAGAAACAGATAGAAGTATCAAATCTAATCAAGAAAAATTCAAAAAAAT------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------AATCATATCAGAGCCAGGTTTCGATCCTGGGACCTGTGGGTTATGGGCCCACCACGCTTCCGCTGCGCCACTCT
GATTTTTGTGTCTAACGTAGACCCGTACGGTACTAGTAGTAGTTTCTCTTCCAACGCTAAGCATCGCAACCAACCTATCA
GGCTTCACACTGTACGCT----GCAGCTTCTCTCGTGTGGATAGACATGGCACCAGCATTACGAGCCTCAGATGCAGCAC
CCCCACCCGCCCGTTGCTCACAGAGTTGCACTTCCCATTCCCGGGACACGTGAAGACCGACCGACCCCGACGCTCAATT-
---CCCATGGAGTAAAGTAT---------AGTTTCGGCACTCG-----CCGTCCCGGGCATCCCCACAGACAACCCCTGC
GATCCACTGGCCACCGCGCCGTGGGCACGTCGCTGCCTCCGGGCCCCGCCCGGAAGTTTTGCGTGCACAAAATCGAGAAG
CGGAAAAACAAAAGCGCAATCCACAAAGCGACCTTAAAAATATCGCGGCAACGTCCAGCCAATCACCGCGCGCCAGGCTA
CGCGGAGCCAGGCCAAGCACGCGAGGGGCCGCCATGGTGGGCACCTCCGCAGGACGCGTGCCCGCCAGC-------CGCC
TATATATCCCTCCTGCGGCACGGCTCCTGGAAGATATTAC---------CTGATCTGTTCCTGCCTTTCCTGCAGCAGTA
GCACACGCACTTT---------------TTC---GTGATGGAGGATTCGGTGGGCGAGGCGGAGAGGAGGGAGCAGGA--
-------GGCGCAGGGGAAGAAGCGCGGACGAGAGGAAGAGCAGGAGGCCGGCGCTGGTCGTGCGGTGGAGGGGAAGGCA
GAGGTGGCGGTGGCTGAGGAGGGCGGGTTTCTCAGCAGCATGGCGTCCAAGATCGGCGTGGCCATGTCGGGTGCTACTAA
CGGCGGCGGCGGCGGCGGCGCTGAGGACACCGGCGAAGGCAATGGCAACGGCAACGGGAACGCGCTTGCTGTCTCTGACG
GCGACGCGGAGAAGGCGGCCGGCAATGGCATCTTCCACAAGCTGCTGTCCAGCTCGTCTCCTTCCCCGCCGGCCGCTGGT
AAGTCACTGCGCTTTTACTTTAGCCTTTGCCGCGCAGCCTCTGCAACTTTGG-----TTGACAGTCTTCCGTGGAGCAGA
GGAAGAGAGAAGGGAAGGGAAAGACGAGGACGAAGGCGGCGAGCAGGCCGGGATACTGAGCGCCATGGCTTCCAAGATCG
GCATGGCCATGTCTGGCAATGGAACCCACGGCGGCAGCGGGGAAGATGTTGATCACAGTAACGGTGAGGGCGAGGGCAAG
GAGAAGGAGATGGGAGGCGACGAGCCGAGCTCCAACGGCGGTGGGCTCGTTAAGCAGATCATGTCCAACCTCCCCACTTC
AGGTGCACTGCCAATCTGCCATTTTCAGTTCCGCCATATCCTTGTGTTGTTGCCTCGATTGTTTCAGCTGACAGGATTTG
CTCTCTCTCCCTCTGTTCTTTTGCCTCGCTGCAGACACTCGGGGGCCCGATGCTGAGGAGGCCTCCCTGCTCATCTCCAT
CATCGACGACTAGACTAGCAGGAGATAGATTTGGCACTTGTTATTTCTGGGTGTAGTTTTACATCGCCCAGCGTGCCCTC
TTTCTTGATGCTCATGTTGTAAC------------------------------------------------------ACA
TGTTTGCACCTTGATAAGTGTACTGGCCTGTAATCGCATTGACT------GAGAACTGGTCCTCCTCGCTTATTATACTT
GCTAGTACTCCTTGGAGTGTGAACATGTGGTGGAAA--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------GAAGTGAAATAAGACTTATAATATGGAAA-------------------
--------------------------------------------------------------------------------
----------AACCAAGAAAATGAGACTTTTTTTTAGAAAAGGAGGATTACCAAGAAAATGAGATGAGCCTACTAAACCG
GAAAGG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------A----------------------------------------------------------------------
--------------------------------AAGGTCAAATAGAGTTCTCTGAAACCATTCAAAACAATGGACAACAGA
CACAGATACAAGACACATATGTTAAAGCGGCTTCTCTGAAGCAAAGATACAAGATACACCCCTGCTAGTGACGGCACAGA
TGAAAACAGATGTTTAAATTTGCATTTGAACTACATATTTCCCTTACCGCAGTGATGTCCCCAAAATCGTGTCGTCATGG
CATTTGGCAGAGCAAAATCATGGGAGGAAGAAATGCAGCTAGCTACGAGATTGCATAAGTCAAAATGCGTATACCACATG
CCATGACATCAAACTGGCTACAGACTGGAGAAACAATATAGCTACTCAGTGCGATGCATTTAGCAGAGCAAAATCATGGG
AGGAAGAAATGCAGCTAGCTACGAGATTGCATAAGTCAAAATGCGTATACCACATGCCATGACATCAAACTGGCTACAGA
CTGGAGAAACAATATAGCTACTCAGTGCGATGCATTTAGCAGAGCAAAATCATGGGAGGAAGAAATGCAGCTAGCTACGA
GATTGCATAAGTCAAAATGCGTATACCACATGCCATGACATCAAACTGGCTACAGACTGGAGAAACAATATAGCTACTCA
GTGCGATGGATAGCCGCGAGACGTAAAATTTAGGTCACGCCATCTCTGAGTACATACATGCCAACGACTGAATATTGCAA
AATAAACCAAAAGTTGTTCGGCCAATGCTGAATCCTGCTAATGCTTGCTAGAAAGACAGCATCACTCGATTTATAGGATG
CAACGTTTCCATCACCGATTCAGTTATATCGCTCCATGAACTTCTCAATCGCCACAGAGAACGCACCAAAACCCACGCAC
CCGATGCATGTAGCTTGAGGGCCACCTGCAAGGAAAATAC
>chr4A_1
CTAATCAAACGCCGTGTGTGAGGGTGGAGGGGCCGGGGGCTGTTTCAAATATTTTCACGAGTTGGACATGATGATTTTCA
CGACATCAGCGCCGCGGAATCGGTTTTCACCTGGGAGCTGGCGATGCGATCATATCACAGGCGCCTCTGCTCATCGCGTT
TGTACGATCGTCTTGACAGTTGTGTTGGCGCCGCACATGTGATCCTTAACAGTT-GTGGTATTACAAGGAGAAA----AT
GCATGCTGTTTTCAGCGTCTCGTGTTTTTTTTAATGCCTTTTTCAGCGTCTCGTGTTGGTTTCAGAGAAGAAGCACCGAG
CATTTCTGGTGTGGCGTTAACAGTTTGTACTACTTGTTCTTATGGTTCGTCAGGTAAAAAGCTTCGTGTAAAGGAAAGTG
TGTAGATGATCAATATTTGGAGGAGAACAGAAAGTAGAGTAAGCCATTCGCGAAGAGAAA-AAAGAAACGAAGTTCAATC
CAGGAAAATAAACAGATAGAAATATCAAATCCAAAAGAAAAATTCAAAAAATCATATCAGAGCCAGGTTTCGAGTTGTGG
TATTACAAGGAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCAGAG
CCAAGTTTCGATCCAGGAAAATAAACAGATAGAAATATCAAATCCAA--AAGAAAAATTCAAAAAATCATATCAGAGCCA
GGTTTCGAGTTGTGGTATTACAAGGAGAAAATGCATGCTGTTTTCAGCGTCTCGTGTTTTTTTTTTTGGAATGCCTTTTT
CAGCGTCTCGTGTTGGTTTCAGAGAAGAAGCACCGAGCATTTCTGGTGTGGCGT-TAACAGTTTGTACTACTTGTTCTTA
TAGTTCGTCAGGTAAAAAGCTTCATGTAAAGGAAAGTGTGTAGATGATCAATATTTGAAGGAGAACAGAAAGTAGAGTAA
GCCATTCGCGAAGAGAAAAAAGAAACGAAGTTTAATCCAAGAAAATAAAGAGATAGAAATATCAAATTCAAAAGAAAAAT
TCAAAAAATCAAATTAGAGCCAAGTTTCGATCCTGGGACCTATGGGTTATGGGCCCACCACACTTCCGCTGCGCCACTCT
GATTTT-GTGTTCAACTTACTTCCGTGCGTTACTTATCTTATG----CTTCCAACGCTGAGAACCGAGAAATGCTTCCAA
AGCAGC------TACGCT----GCAGCATCTCTCCTGTGGATACACATGGCATCAGCAATACGAGCATCAGATGCAGCAC
CA----------------CACAGAGTTGCACTTCCCATTCCCGGGACACGTGAAGACCGACCGACCCCGACGCCCAGTTC
CCTCCCATGGAGTAAAGTAT---------AGTTTGGACGCTCCACTCTCCGTCCCATGCATCCCAACCGACAGCCCCTGC
GATCCACCGGCCACCGCGCCCTGGGCACGTCGCTGCCTCCGGGCCCCGGCCGGAGGTTTCGCGTGCACAAAATCGAGAAG
CGGAAAAACAAAAGCGCAGCCCACAAAGCGACCTTAAAAATATCGCGGCAACGGCCGGCCAATCCCCGCGCGCCAGGCTA
CGCGTCCCCAGGCCGAGCACGCGAGGGGCCGCCATGGTGGCCGTCTCCGGAGGACGCGTGTGCGCCAGCCGCCAGCCGCC
TATATATCCCTCCTGCGGCACGGCTCCTGGAAGATAATAC---------CTGATCTGTTCCTGCCTTTCCTGCAGTAGTA
GCGCACACACTTTGGTGAGCTGAGTACTGAGTTGGTGATGGAGGATTCGGTGGGCGAGGCGGAGAGGAGGGAGCAGGAGG
AGGCCATGGCGCAGGGGAAGAAGCGCGGGCGAGAGGAAGAGCAGGAGGCCGGCGTTGGTCGCGCGGTGGAGGGGAAGGCG
GAGGTGGCGGTGGCTGAGGAGGGCGGGTTTCTCAGCAGCATGGCGTCCAAGATCGGCGTGGCCATGTCGGGTGCTA---A
CGGGA------GCGGCGGCGCTGGGGACACCGGCGAAGGCAATGGCAACGGCAACAGGAGCGCGCTTGCTGCCTCTGACG
GCAACGGGGAGAAGGCGGCCGGCAATGGCATCTTCCACAAGCTGCTGTCCAGCTCGTCTCCCTCCCCGCCGGCCACAGGT
AAGTTACCGCGCTTTAG--TTAACCTTTGCCGCGCAGCCTCTGCAACTTTGG-----TTGACAGTCTTCCGTGGAGCAGA
GGAGGAGAATAGGGGAGGGAAAGACGAGGACGAAGGCGGCGAGCAGGCCGGGATACTGAGCGCCATGGCTTCCAAGATCG
GCATGGCCATGTCTGGCAATGGGACCCACGGCGGCGGCGGGGAAGATGTTGATCACGGTATAGGTGAGGACGAGGACAAG
GAGAAGGAGACGGGAGGCGACGAGCCGAGCTCCAACGGCGGTGGGCTCGTTAAGCAGATCATGTCCAACCTCCCCACTTC
AGGTGCACTGCCGATCTGCTATTCTCAGTTCCGCCATATCCTTGTG-TGTTGCCTCCATTGTTTCAGCTGACAGGATTTG
TTCTTCTCTCT----GTTTTTGCCTTCACTGCAGAAACTAGGGGGCCCGATGCTGAGGAGGCCTCCCTGCTCATCTCCAT
CATCGACGACTAGACTAGCAGTAGATAGATTTGGCACTTGTCATTTCTGGGTGTGATTTTACATCGCCCAGCGTGCCCTC
TTTCTTGATGCTGATGTTGTAACCTCTAGGGTAGGGTTGCTGTTGGTAGACGTTTTCTTCTAGACACAAGTCACTGCACA
TGTTTGCAC-------AGTGTACTGGCCTGTAATCGCATTGACTCCTGGAGAGAACTGGTCCTCCTCGCTTATTATTTGC
TATAATAATGCTATAATATTACTTTGTCAGCCTATCAGGCTACAAGACCAGGCAGGTTTGAAGTCATTGCAAGACCAGGC
AGGTTTGAAGTCATTGCTGTGGTATGCAGACGGGAAGACTAGCCACAATGGGTAGTAACATAGACTAGTAACATGCATAT
GTTACTAGTTTATGTTATTATCTCTATAGTGCGGAGTAACATATGTATTGTAACATACAACACTTTATTTATGAGTCTAT
AGACTCATCTTGTCTTGATATGTGTGATGTTACTCATACTACTAGTAAGACTAGCTGCAGGGGGAGTAACTTCAGCAGAA
CATCAAGTCCAACTCAGCAATTTTG---TTTATGTGGCAATGAGTTAATGAAGAGAGAGATAGTTGCAGTAACTTAGCTA
ATTACTGTAACATCACATATCCCAATGCAATATGAGTCTATAACCTATAAATGAATCTTTGCACTATGAAGGTAGTAACA
TAGTCTAGGGATATGTATATATTACTATCCATTGTGGCTAGTCTAACTAGCTATATTACCACTCCCCTCTTTTTTCCATT
TATTGTTTGCCACATCATCTATTTTATATAGATATGTGTGATATTACTATCTATGTTACTTCCATTGTGAGTAGTCTAAG
CACAAGTAAA----------------------------------------------------------------------
--------------------------------AAAGTCAAATAGAGTTCTCTGAAACCATTCAAAACAATGGACAACAGA
CACAGATACAAGCCACATATGTTAAAGCGACTTCTCTAAAGCAAAGATATAAGATACACCCCTGCTAGTGACGGCACAGA
TGAAAGCAGAAGTTTTAATTTGCATTTGAACTACATATTTCCCTTACCGCAGTGCTGTCCCCAAAATCGTATCGTCATGG
CATTTGGCAGAGCAAAATCCTGGGAGGAAGAAATGCAGCTAGCTACGAGATTGCATAAGTCAAAATGCGTA---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------TACCACATGCCATGAGATCAAACAGGCTACAGACTGGAGAAACAATATAGCTACTCA
GTATGATGGATAGTCGCAAGACGTAAAATTTAGGTCACACCATCTCTGAGTACATACATGCCAACGACTGAATATTGCAA
AATAAACTAAAAGTTCTTCAGCCAATGCTGAGTCCTGCTAATGCTTGCTAGAAAGAC-GCATCACTCAATTTATAGGATG
CAACGTTTCCATCACCGATTCAGTTATATCGCTCCATGAACTTCTCAATCGCCACAGAGAAGGCACCAAAACCCACGCAC
CCGATACATGTAGCTTGAGGGCCACCTGCAAGAAAAATAC
>SNPs
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
-----------S----------S----------S-S-------S------------S-----------------------
--------------------------------------------------------------------------S-----
--------------------------------------------------------------------------------
-----------------------------------------S--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S----S------S----SS-----------SSS--SSS
S--SSSS-SS----------------------------------------------------------------------
-----------------------S--------S------S-----S---S--SSSSS-----------------------
--------------------------------------------------------------------------------
----------------------S---------------------------------------------S------S--SS
-SSSS---S--SS--S-SSSSS----------------------------------------------------------
--------------------------------------S-----------------------------------------
-------------------SSSSSSSSSS--------------------------------S------------------
-------------------------------------------------------S--S-S-------------------
--------------------------------------------------------------------------------
------S-S---------------------------------------S-------------------------------
----------------------------------------SSSSSSSSS---------------------------S---
---------------------S---S-S-----------------S----------------------------------
--S------------------------------------------------------------S----------------
-----------------------S--------------------------------------------------------
--------------------------------------------------------------------------------
------S------------------------------------S-----------------------S----S-------
-----------------------S-----S---S--SS-----S------SSSSSSS------------------S----
---------------------------------------------------------S--------------------S-
-------------S-----------S--------------------------------------------S---------
---------------------------------------------S-------------------------------S--
--------------------------------S---------S-------S-----------------------------
---------S----------------------------------------------------------------------
---------------------------------------------S--------------------------------S-
--S-----------------------------------------------------------------------------
---------------------S-----------S-------------------------------------------S--
----------------SS--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S-S-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------S--------------S-----------------
--------------------------------------------------------S---S-------------------
--------------------------------------------------------------------------------
---------------------------------------------------S----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
----------------------------------------
>forward_1488
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------GCACCGAGCATTTTGTGGTT--------------------------------
--------------------------------------------------------------------------------
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----------------------------------------
>reverse_3171
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------CGCCTCGATTGTTTCAGCTG----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------
>forward_2844
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------CTTTGTCGCCCACTCTCTGA------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------
>reverse_4870
--------------------------------------------------------------------------------
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---------------------------------------------------------------------GTAGCTACTCA
GTGCGATGGA----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
