>input_sequence_67619
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-------------------------------AACCCGCAAAAGGCGAGGAGAGA--GCCATGGAGGACAGAGACCATGGC
CCCGCTGAGAACCTTCCTGAGTCTCCACACCGCATCGTCGACGGCGACGAGGAGGGAGACGAAGACGGAGACGGCTTCAC
CTTCCCCGTCCTACCGTTCGTGGCGGACGCGCACATCGTGCCCGTGTACCCCGTCTTCGGCCGGCCCCCGCCCCCGCCGC
CGGCGGCCTCGGTCGACGAGCAGGAGACGGCCACCGTGCGCGTGCCGCTGGGGCGGCTCCTGCTGGAGGAGCGCGACTTC
CGCGCGAGGCAGAGGGACGAAGAGGGCTCCGGGGCCGGCGAGCTGGAGGGCGTGGCGCCGGAGAGTTACTGCCTCTGGGC
CCCCGGGCAGTCCACTCCGGCGTCCCCGCGGCGGTGCCGGAAGAGCAGCTCCACGGGGTCGGTGCTCCGGTGGCGTCGCA
TCAGCGAGCGCCTCGTGGGGCGGAGCCACAGCGACGGCAAGGAGAAATTCGTCTTCTTGGACGCCACCTCAGGGCCTCCC
AAGCAGGGGGACGTGGTGGAAGGGGGCAGCAGGAGCGACGGCGGCGGTGGCGCCGATGCCCACGGATGGAGCTATTACAG
CAA---AGGAGGAGGAGGTGGAGGAGGAAGCGGCGGCGCTGGCCGGAGGAGATCTTACCTCCCGTACAAGCAAGAGCTTG
TCGGGTTGTTCGCCAACGTCAGTGGGTTACGGCGAAGCTATCCCCCGTTCTAATGCGTTTCTTGGCTTCTCTCTCTACCC
CGTCAATATTTTCTGCTTTTGTGTGCATAATAGTATC-GCATAACCTTGGTAGTGTTATTAGAAATAAA-----------
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>chr3D_1_TraesCS3D01G240500
GATCATGGCCTCATTCAGATAGTTGTCAGGTAGTTTCAAAATCCTTGCCCAGACCGCCACCTTGTCCAGTACCACGGACT
TAGGGTTTCGTGAACCCATCATATTCAACTAGGATAACCACTTGATTTCCAAAAAAGGGGGCCTTTCAACATCGCGGTGT
TCCAGTCACCCAAACACCCAAACTGAATGGTAAAGAACTTATCTTTGATCAGTTGCCAATGTGCTTCTTTCACTGGATTC
CATGCATACCTCATG------------GCCAGACTAAACCCCTTACTAGTGTGAACCCTAGTCCATGACCAACCACTTTG
CTTGAACTTTTGGCACAACCGGATCATCCTCCCAAAGGAAGTCCTCTCCATCATTCCCATGCAGATCAAGACGCTTGATC
AGATCTTCCACGTTTCCCGACTCATGTTTCCTGCCGCCACTTCCTCCACTCTTCATTGCCTGAACTAAATTGGAAATCCC
CCGTCGAACCTCCAAAACCTCGTCGGCCGAGGCGA---------------------------------------------
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-----------------------------------------------------------------------GGTAGAAGC
GTGAGGCTTCCCCTGGATCAACACGAGCCGCTAGATCCGCCGGAGGTAGACGAGTTAGCCGGAGGGGAGACCGACCTGAG
TAGACAAAACTCTCGACGTAGCCGCCGTTAGA-GGAGCCCTAAACCCTAGCTTGAGCGCTCACTCTTTTGGAAACTGAGC
GCTCCTTTGGCCCCATTTAGCTCCTTTTTGTCTTCATTTAGTTCGTGTTTTTTGGGA---CTTCTAGCCTGAGCAGCAAC
TTTACCA----------CGCACTGACACGTTTCTCACGCCGCAAACCAAACGCGCCAGGTTCAGGCG-------------
---TTCAGCTCCTGGGTACTGACCTGTGGTACCCAGAACGCAATAAGGCCCATCTGTCAGCTTGAAGGAGTTATCTTTCA
CACCGCTCTGTGTTCACTTGCCGCCGCCACCGGCTC--------------------------------------------
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-----------------------------AGGCCGAAAAAACGAACCCGACCCAGCCAAGCAAAAGGAAAGAAGCCACAC
ATAAAGGCAAGCGATCAAATATCTATCCTTCAACCCGCAAAAGGCGAGGAGAGA--GCCATGGAGGACAGAGACCATGGC
CCCGCTGAGAACCTTCCTGAGTCTCCACACCGCATCGTCGACGGCGACGAGGAGGGAGACGAAGACGGAGACGGCTTCAC
CTTCCCCGTCCTACCGTTCGTGGCGGACGCGCACATCGTGCCCGTGTACCCCGTCTTCGGCCGGCCCCCGCCCCCGCCGC
CGGCGGCCTCGGTCGACGAGCAGGAGACGGCCACCGTGCGCGTGCCGCTGGGGCGGCTCCTGCTGGAGGAGCGCGACTTC
CGCGCGAGGCAGAGGGACGAAGAGGGCTCCGGGGCCGGCGAGCTGGAGGGCGTGGCGCCGGAGAGTTACTGCCTCTGGGC
CCCCGGGCAGTCCACTCCGGCGTCCCCGCGGCGGTGCCGGAAGAGCAGCTCCACGGGGTCGGTGCTCCGGTGGCGTCGCA
TCAGCGAGCGCCTCGTGGGGCGGAGCCACAGCGACGGCAAGGAGAAATTCGTCTTCTTGGACGCCACCTCAGGGCCTCCC
AAGCAGGGGGACGTGGTGGAAGGGGGCAGCAGGAGCGACGGCGGCGGTGGCGCCGATGCCCACGGATGGAGCTATTACAG
CAA---AGGAGGAGGAGGTGGAGGAGGAAGCGGCGGCGCTGGCCGGAGGAGATCTTACCTCCCGTACAAGCAAGAGCTTG
TCGGGTTGTTCGCCAACGTCAGTGGGTTACGGCGAAGCTATCCCCCGTTCTAATGCGTTTCTTGGCTTCTCTCTCTACCC
CGTCAATATTTTCTGCTTTTGTGTGCATAATAGTATC-GCATAACCTTGGTAGTGTTATTAGAAATAAAATTGGTGTGCT
TATATAT-----TAAATTAGGATATGCTTGGCTAAGGTAAATGTAAAAACCACACCATCTCAACGATAGAGATCGGAGAA
GGATAG---ACTATTTTGTAGGTTCTCTGTTTGCTTGCACACTTCAGTCAGAAAGAACTGCTGTTCTTCTGTTAGTTCTG
ATCTTTTTGTTTTCATCAATCTCAGGGTAGGATAGAACTGCCCATTCTAATGATTGTACGGGAG-------AGAATTTTG
TATGTTGATTGGTAGTTTAGGTGAATTCATGTATGGTGTAACCTCTTTGTTTTGTTCGAGCGTGTCCTTTTGGGCAAAGC
TCTGGGTGGCGGCGTTATTAGTTGATTTTAATACTGTGACGTTGTACTAA------------------------------
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------------------------------------------------------------------------------TA
GTTTTCATACGCATACGTACAAAACAATTCATGCCTCG-TTGTCTTATTGGTCCTCCACTCCACATTGATGTCGCCAAAG
CAATCTGTACGTTAAGACGTCAGTACAGAGACTGTTCTATTTTTGTGCTTGGAACAAGATCCATAATTTCAATGATGTTC
ACTTAATCACGTAGAGTACAATATACTTTTGCAGAGCAGTCAAACAGTTCATGCTCGCA----TGTATACAAAATTGCAA
ACTTGGACTCTGATTCTGTCGATTATA-----------------------------------------------------
---------------------------------------------------------------------TACTACAACTA
AGTAC---------------------------------------------------------------------------
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---GAGTATATTGTAGTGGGCTCTTACGATAAGCAAGAATTTTGCTGATGTATACCCAGTTGCCAACTACGACATTTTCT
CCGTAGTGAGATGAATTGCATTTGTATATGTGTCCTCCAGATGCGGAGAGAGCATCTACAATTATGCAGGTCGTAACCAA
ATACACCAACTACTGGATGTGATGGGACCTGAATCCCCAAAACTTTACTCCTTGGAGCTCGCCTGCTTGGAGGTTCCCC-
-GTCAAGACGCCCATCCATCCATCCATCA----AGTAGGC--------------GACGGGTTCGACCGCGACAGCCGCTT
CGCGGGCCGAGCTGCTAACCAAAACCCACCGGCAACCACACTTCT--TTTTGCGATGAA
>chr3A_1
GATCATGGCCTCATTCAGATAGTTGTCCAGTAGTTTTAAAATCCTTACCCAGACCGCCACATTGTCCAGTACCATGGACT
TAGGGT-TCGTGAACCCATCATATTCAACTGGGATAACCACTTGATTTCCAAAAAAGGGG-CCTTTCAACATCGCGGTGT
TCCAGTCACCCAAACACCCAAATTGAATGGTAAACAAATTATCTTTTATCAGTCGCCAATGTGGTTCTTTCGCTGGATTC
CATGCATACCTCATGTCAGCATACACGACCGGACTAAACCCCTTACTAGTGTGAACCCTAGTCCATGGCCAACCACTTTG
CTTGAACTTTTGGCACAACCGGATCATCCTCCCAAGTGAAGTCCTCTCCATCATCCTCATGCAGATCAAGATGCTTGATC
ATATCTTCCATGTTTCCCAACTCATGCTTCCTGCCACCACTTCCTCCACTCTCCACTGCCTGAACTAAATTGGAAATCCC
CCGTCAAACCTCCAAAACCTCGTCGTCCAAGGCCA---------------------------------------------
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-----------------------------------------------------------------------GGAAGAAGC
GTGAGTCTTCCCTTGGATCAACACAGACCGCTTGAACCGTCGGAGGTAGAGGAGATAGCCGGAGGGGAGATCGACCTGAG
TAGACAAAACTCTCAACATAGCCGCCGTCAGA------------------------------------------------
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>chr3B_1
GATCATGGCCTCATTCAGATAGTTGCCAGGTAGTTTCAAAATCCTTTTCCAGACCGCCACCTTGTCCAGTACCACGGACT
TAGGGT-CTGTGAACCCATCATATTCAACTAGGATAACCACTTGAGTTCCAAAAAAGGT--CCTTTCAACATTGCGGTGT
TCCAGTTACCCAAACACCCAAACTGAATGGTAAACAAATTATTTTTGATCAGTCGCCAATGTGCTTCTTTCGCTGGATTC
CATGCATACCTCATGTCAGCATACATGGCCGGACTAAACCCCTTACTAGTGTGAACCCTACTCCATGGCCAACCACTTTG
CTTGAACTTTTGGCACAACCTGATCCTCCTCCCAAACGAAGTCCTCTCTGTCATCCTCATGCAGATCAAGATGCTTGATT
AGATCTTCCATGTTTCCCGGCTCATATTTCCTGCCGCCACTTCCTCCACTCTCCATTGCCTGAACTAAATTAGAAATCCC
CCGTCGAACCTCCAAAACTTCATCGGCCAAGGCTAGGTAGAAGCAATGGCGGAGACAGGGGGACCAGCAGGGGCCCTGCC
CCCCCCCCTAACAGCACCGATTTGGTACTAATATAGCTATGAACAGTGCAGAATTTAGAGAATAATACATGCATTAGTGT
AGTTTGGTTCCTATAATCCAAAGTATGTGTCATTTGCCCTCCCTAATTTTTAATTCCTGGCTCCGCCACTGGGTAGAAGC
GTGAGGCTTCCCCTGGATCAACACGAGCTC------------GAGGTAGAGGAGATAGCCGGAGGGGAAATCGACCTGAG
TAGATAAAACTCTCAATGTAGCCGTCATTCAGTGGGGCCCTAAACCCTAGCCTGAGCGCTCACTTTTTTGGGAACTGAGC
GCTCCTTTGGACCCATTTAGCTCCTTTTTGTCCTCATTTAGTTCGTGTTTTGGGGGACTTCTTCTAGCCTGAGCACCAAC
TCACGCACACTTTACCGCGCACTTACACGTTTCTCACGCCGGAAACCAAACGCGCCGGATCCAAGCTACGCCTCAACCAT
CACTTCAGCTCCTGGGTACTGACCTGTGGTACCCAGAACACAATAAGGCCCATCGATCAGCTTGAAGGAGTTATCTTTCA
CACCGCTCTGTGTTCACTTGCCGCCGGCACCGGCTCAGAGCATCTCCAACGGTTGTCCCAAACGACGCGCGCGCGATAAA
CCCAACTTTTAGCGCGCGCGGGGCGGTTTGCCGCACTCCAACGGTCGAGGGAAACAAGCGCGCGCGGGAACCGTTTGCGC
GCGCGAAAAGGCGCCATCTCGCGCGCAAGATTTAGCGCGCTGCTTCGCGCGCGCCTATAAAAGTGCTGCGCGCGCCACGC
GCCTTCTCCACGCTTCCTCTTCTTCTCTTCCTCTCCCTCTCTGCCACGCGCCGCGTCAGCGCCCCGCCACCGCCGCGCCA
CCATGCCGCCGCGCCGCCGAGGAGCGTCCGGCTACCGCGGCGTCCGCCTGCGCCCAACGATAGCTATTCCGCGGAGATAC
GCTCCGGCGAACTCCGGCTCGGCCTCGGCTCGTACGGGACGGCGCGCGAGGCCGCCCGCGCGTACGACGCGGCGGCGTGG
CTTCTAGGCCGGCTGCGCGGCCAAATGAACTTCCAAGATGTGTACACGCTCCAGCAAGCGCTCAACTTCGCCCCTCTGCC
TCGTCTGAACACGGCGGAAGACCGTGCGGAGCACGCCGAGCGGCAACGCCGCCTCCTCGTCGTCCAGGAGGACGAGCGGG
TCATGGCGGAGTGGCGCCAGCGCCAACCGGAGGACGTCGCCTACGAGCAGTCCTACTGGGCAAGGCGCCGCGAGGAGAAC
ACGCGAAGGCGCCGCGCGACGCGGTTGGACAAGCGTCGGCGGAAGGCGTTGGCGAATGCGCAGTCCGACCTCATTGCAGC
AGGTGGGCAGTCGTTCTTCACGCCGAACGATGAGCGGTGGCTGGACATCTGGCTAACTACCTCAAACGACACCGCCGAAG
ATGATAGTGGTGATGATGATAGCGACTTAGAGTAGTTTTTTTAATGCAATCTATGTTTTTTATCGTTTGTCGTTTTTATT
TATGCAATCTATGTTTCGGATGTTTTGTATCGTTTAAAATCTATGCAATCTATCTAGTTTTTTTTAAAATTTCTGCTTTC
AATGCCTACATTTCTAGTTTATAGAACGAGCGTGTGCGCTGCATTTTTACGTACTGCTGGAACGACGCGCGTGCTGCATT
TTAGCGCGGCTGCTAGAGCGGACGCAGCGCGCCGCGCTAAACCAGACGACAGGTGCGCGCTAAAGCTGTTTTTTACGCGC
GGCGCGTTCGGGCGTCTGGAGATGCTCTCAGGCCGAAAACACCAACCCGACCCAGCCAAGCAAAAGGAAGGAAGCCACGC
ATAAAGGCAACCGATCAAATATCTATCCTTCAACCCGCAAAAGGCGAGGAGAGA--GCCATGGAGGACAGAGACCACGGC
CCCGCTGAGAACCTTCCTGAATCTCCACACCGCATCGTCGACGGCGACGAGGAGGGAGACGAAGACGGAGGCGGCTTCAC
CTTCCCCGTCCTACCGTTCGCTGCGGACGCGCTCATCGTGCCCGTGTACCCCATCTTCGGCCGCCCCCCGTCCCCGCCGC
CGGCGGCCTCGGTCGAGGAGCCGGAGACGGCCACCGTGCGAGTCCCGCTGGGGCGGCTCCTGCTGGAGGAGCGCGACTTC
CGCGCGAGGCAGAGGGACGAAGAGAGCTTCGGGGACGGCGAGCTGGAGGGCGTGGCGCCGGAGAGCTACTGCCTCTGGCC
CCCCGGGCAGTCCACTCCGGCGTCCCCCCGGCGGTGCCGAAAGAGCGGCTCGACGGGGTCGGTCCTCCGGTGGCGGCGCA
TCAGCGAGCGCCTCGTGGGGCGGAGCCACAGCGACGGCAAGGAGAAGTTCGTCTTCTTGAACGCCACCTCAGGGCCTCCC
AAGCAGGGGGACGCGGAGGAAGGAAGCAGCAAGAGCGACGGCGGCGGCGGCGCCGATGCCCACGGATGGAGCTATTACAG
CAA---AGGAGGAG------GAGGAGGAAGCGGCGGCGCTGGCCGTAGGAGATCTTACCTCCCGTACAAGCAAGAGCTTG
TCGGGTTGTTCGCCAACGTCAGTGGGTTACGGCGAAGTTATCCCCCGTTCTAATGCGTTTATTGGCTTCTCTCTCTACCC
CGTTAATATTTTGTG-TTTTGTGTGCATAATAGTATTTGCATAACCTTGGTAGTGTTATTAGAAATAAAATTGGTGTGCT
TATATAT-----TAAATTAGGATCTGCTTGGCTAAGGTAAATGTAAAAACTACACCGTCTCAACAATAGAGATCAGAGAA
GGACTA---ACTATTTTGTAGGTTCTCTGTTTGCTTGTATGCTTAAGTCAGAACTGCGTTCATTT----TGTTCGTTCCG
ATCATCTTGTTTTTCTCAATCTCAGAGTATGTTCCTCTTCTACATGTTCATGTTGATGCTTCTATATTGAAAGGATTTTG
TATGTTTGTTAGGAGTTTAGGTGAATTCATG--TGGTGTAACCTCTTTGTTTTGTTCGGGCGTGTCCTTTTGGGCAAAGC
TCTGGGTGGCGGCGTTATTAGTTGATTTTAATACTGTGACGTTGTACTAAGGCTGGTCATAGTGGGGAGTAACATAGACT
AGTAACATATGTAGTCTAAGTTACTACCTTCATAGTGGGTAGTGTCATAGGTGTGGTAACATAGTTGCCTTCATTTATTA
CTTTGTAGATTCATTATGCATTGGAAACCGCTATGTGATGGTAACATATTATGGTACTCTATTTGCCTCTCTCCTCATTA
ACTACTTGCCACATTATCATTTTTGCTTATGTGGCATCTATGTTACTACTTATGTTACTCCCACTATGACCAGCCTAATA
GTTTTGATACGCACACGTACAAAACAATTCATGCCCCCATTGTCTTACTGGTCCTCCAT-----ATTGATGTCGCCAAAG
CAATCTGTACGTTAAGACGTCAGTACAGAGACTGTTCTATTTTTATGGTTGGAATAAGATCCATAATTTCAATGATGTTC
ACTTAATCACGTAGAGTACAATATACTTCTGCAGAACAGTCAAACAGTT----CTCGCA----TGTATACAATATTGCAA
ACGAGGATTCTGATTCTGTCGATTATACTTCCTCCATCCGAAAATACTTGTCATCAAAATGGATAAAAGAAGATGTACCT
AAACGTATTTTAGTTCTAGATACATTTATTTTATTCATTTCGATGATAAGTATTTTCGGACGGAGGGAGTACTACAACTG
AACTACTCCCTCAGTTCCTAAATGTAAGTCTTTTTAGAGGTTTCAAATGAACTACAACATACGGATGTATATAGACATAT
TTAGAGTGTGGATTCACTTATTTTGCTACATTTGTAGTTCCTTGTTGAAATCTCTAAAAATATTTATATTTTGGAACGGG
AGGGAGTATATTGTAGTGGGCTCTTACGATAAGCAAGAATTTGGCTGATTTATACCCAGTTGCCAACTACAACATTTTCT
CCGTAGTTAGATGAACTGTATTTGTATATGTGTCCTCCAGATGTGGAGAGAGCATCTACAATTATGCAGGTCGTAACCGA
ATACACCAACTACTGGATGTGATGGGACCTCAATCCCCCAAC--TTACTCCTTGGAGTTCGCCTGCTTTGATGTTCCCCC
CGTCAAGACGCTCGTCCGTCCATCCGTCCGTCAAGTAGGCCACAAGCCCCACGGGACGGGCTCGACCGCGACAGCCGCTT
CGCGCGCTGAACTGCTAACCTGAATCCACCGGCAACCGCACTTCT--TTTTGCGATGAA
>chr3A_622
AGAGGGGCC-----------------------------------------------------------------------
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-----------------------------------------AAACCCTAGCCTGAGCGCTCACTTTTTTGGGAACTGAGC
GCTCCTTTGGCCCCATTTAGCTCCTTTTTGTCCTCATTTAGTTCGTGTTTCTTGGGA---CTTCTAGCCTGAGCAGCAAC
TCACGCACACTTTACCGCGCACTGACACGTTTCTCACGGCGCAAACCAAACGCGCCGGATCAAAGCTACGCCTGAACCAT
CACTTCAGCTCCTGGGCACTGACCTGTGGTACCCAGAACGCAATAAGGCCCATCTGTCAGCTTGAAGGAGTTATCTTTCA
CACCGCTCTGTGTTCACTTGCCGCCGCCACCGGCTC--------------------------------------------
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-----------------------------AGGCCGAAAAAAGGAACCCGACCCAGCCAAGCAAAAGGAAGGAAGCCACAC
ATAAAGGCAACCGATCAAATATCTATCCTTCAACCCGCAAAAGGCGAGGAGAGAGAGCCATGGAGGACAGAGACCACGGC
CCCGCTGAGAACCTTCCTGAATCTCCACACCGCATCGTCGACGCCGACGAGGAGGGAGACGAAGACGGAGGCGGCTTCAC
CTTCCCCGTCCTACCGTTCGCGGCGGACGCGCTCATCGTGCCCGTGTACCCCATCTTCGGCCGCCCCCCGTCCCCGCCGC
CGGCGGCCTCGGTCGACGAGCAGGAGACGGCCACCGTGCGAGTCCCGCTGGGGCAGCTCCTGCTGGAGGAGCGCGACTTC
CGCGCGAGGCAGAGGGACGAAGAGAGCTTCGGGGACGGCGAGCTGGAGGGCGTGGCGCCGGAGAGCTACTGCCTCTGGGC
CCCCGGACAGTCCACTCCGGCGTCCCCGCGGCGGTGCCGGAAGAGCGGCTCAACGGGGTCGGTCCTCCGGTGGCGGCGCA
TCAGTGAGCGCCTCGTGGGGCGGAGCCACAGCGACGGCAAGGAGAAGTTCGTCTTTTTGAACGCCACTTCAGGGCCTCCC
AAGCAGGGGGACGTGGAGGAAGGAAGCAGCAGGAGCGACGGCGGCGGCGCCGCCGATGCCCACGGATGGAGTTATTACAG
CAAAGGAGGAGGAG------GAGGAGGAAGCGGCGGCGCTGGCCGGAGGAGATCTTACCTCCCATACAAGCAAGAGCTTG
TCGGGTTGTTCGCCAACGTCAGTGGGTTACGGCGAAGTTATCCCCCATTCTAATGCGTTTCTTGGCCTCTCTCTCTACCC
CGTCAAT-TTTTCTGCTTTTGTGTGCATAATAGTATT-GCATAACCTTGGTAGTGTTATTAGAAATAAAATTGGTGTGCT
TATATATAGTACTAAATTAGGATCTGCTTGGCTAAGGTAAATGTAAAAACCACACCATCTCAACAATAGAGATCGGAGAA
GATATACGTACTATTTTGTAGGTTCTCTGTTTGCTTGCACACT--AGTCAGAAAGAACTGCTGTTCTTCTGTTCGTTCTG
ATCTTTTTGTTTTCATCAATCTCAGGGTAGGATAGAACTGCCCATTTTAATGATTGTACGGGAG-------AGAATTTTG
TATGTTGATTGGTAGTTTTGGTGAATTCATGTATGGTGTAACCTCTTTGTTTTGTTCGAGCGTGTCCTTTTGGGCAAAGC
TCTGGATGGCGGCGTTATTAGTTGATTTTAATACTGTGACGTTGTA----------------------------------
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--------------------------------------------------------------------------CTAATA
GTATTGATACGCATACGTACAAAACAATTCATGCCTCA-TTGTCTC------------T-----ATTGATGTCGCCAAAG
CAATCTGTACGTTAAGACGTCAGTACAGAGACTGTTCTATTTTTACGGTTGGAATAAGATCCATAATTTCAATGATGTTC
ACTTAATCACGTAGAGTACAATATACTTGTGCGGAACAGTCAAACAGTT----CATCCTCGCGTGTATACAAAATTGCAA
ACGAGGATTCTGATTCTGTCGATTATACTACAACTATAC-----------------------------------------
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------TATATTGTAGTGGGCTC----GATAAGCAAGAATTTCGCTGATGTACACCCAGTTGCCAACTACGACATTTTCT
CCGTAGTTAGATGAATTGTATTTGTAT-------------ATGTGGAGAGAGCATCTACAATTATGCAGGTCCTCACCAA
TTACACCAACTACTGGATGTGATGGGACCTGAATCCCCCAAACTTTACTCCTTGGAGCTCGCCTGCTTTGATGTTCCCCC
CATCAAGACGCCCATCCATCCATCCATCA-TCAAGTAGGC--------------GACGGGTTCGACCGCGACAGCCGCTT
CGCGGGCCGAGCTCCTAACCAAAACCCACCGGCAACCACACTTCTCTTTTTGCGATGAA
>SNPs
----------------------------------------------S---------------------------------
------S-----------------------------------------------------S-------------------
----------------------------------S--S---------------S-----------------S--------
------------------------------S------------------------------------S------------
------------------------------------S-----------------S-S--------------S--------
----------S-----------------------------------------S---------------------------
----------------------------S----S----------------------------------------------
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--------------------------------S--S---S----------S---S---------------S---------
--------------S--------------------S---------------S------------S------S--------
--------------------------------S-----------------------------------------------
-SSSS---------------------------------------------------S-S-S--S--S-------------
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---------------------------------------------------------------------S----------
----------S-----------------------------------------------------------------S---
--------------------S-------------------------------------------------S---------
--------------------S-----------S-------------------S----------S------S---------
----------------------------------------S--S------------------------------------
------------------------S---S-----S------------------------------S--------------
----------------------------------------------S----S-----------S-----------S----
----------------------------------------------S------------S--------------------
----------------S------SS----------------------S--------------------------------
--------------SSSSSS------------------------------------------------------------
-------------------------------------S------------------------------------------
------------------------------------S-------------------------------------------
-----------------------S----------------------------------------S---------------
---SSS--------------------------------------S----------------------------S------
----------------------------------------------S---------------------------------
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-----S-------------------------------S---------S----------SSSSSS----------------
--------------------------------------------S--S------S-------------------------
----------------------------S------S-------------SSSS---------------------------
--SS---S------------------------------------------------------------------------
-------------------------------------------------------------------------------S
-SSSS---------------------------------------------------------------------------
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------------------------------------------S-------------------------------------
-------S----------S------------------------S------------------------------------
--------------------------------------S-----------------------------S--S--------
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>forward_852
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--------------------------------AGGAGCCCTAAACCCTAGCT----------------------------
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>reverse_3982
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-------------------------------------------------------------CACATTGATGTCGCCAAAG
CA------------------------------------------------------------------------------
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