>input_sequence_67590
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----------------------------ATGGGCAACTGCCTGAACAAGGCGTCTACGCAGCAGCAGCGCGAGATGCGGC
GGCGGCACGGCCACGGCGAGCGGGTGGCGCCGGAGGAGAGGGAGGAGGAGGAGGAGCAGCTCAGGAGCATCGGCCAGGTG
CTGCTGCAGGAGGAAGAGGAGGAGGAGGAGGAGGCG---------CCGGCGTCCGCGTCGCCGGCGGCCGGGATGAAGGT
GAAGGTGGTCCTGACGAGGGCGGAGCTGGAGTGGCTCATGGCGCAGCTCAAGAGCGGCGAGCAGCGCCTCGAGGACGTCC
TCCGCCAGATGGGCAACGCCCGCGCCGACGACTACAAGCCGCCGCGCGCCGACGCCTGGCGCCCGCGCCTCGAGTGCATC
CTCGAGTGCCCCGAGGCCGCCGACGCCACCTAGCTCCTCAACGTACACACGGCGCCCGTCCGTCCGCTCTCGATCGATCT
CCCCTCCCCGGTCACCGCGCGCGATCAGAGCTTGATCTCCTCCATGA----GCTAGTAGCTTTCTTGCTTAGATCCGTCC
GTCTCTGTGCATGGTCCATGGTGTGATCCATGGAGAGGCTTCTTGTTTTTCTGTTTCTCTCCAAAGGATCCATGA----A
GTGGT---GCTTGAGTTAGGATGAACACCAACTGTACTATGTAGCCTGTTAGAGCA---GTAGTAGCTTTTGATTTCTCA
CTGGTGA-------------------TGTACTCGTATCTGGGTTTTGCTCCGTCCGCTTGCTTTGG------------TT
TTGCCTTTCTGGTGTTGTTTGTAAATAGCGTGTGGCCAC-----------------------------------------
------------------------------------TTCGGTGGCGCAATCCACCCTTTTTAAACCTTGTATACATCCAC
ATTCGCTACTTACCATATTTCCCGCATATTAAA-----------------------------------------------
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>chr7D_1_TraesCS7D01G328700
TCCGCGTCCCTCCCCTACGGCCATGGGCCCTCTCCAGCACGCGAAGGCGTAGCACGCCACCGCCACGTACCACCTGCTGC
TGCTAGCGACCTGCATGTCGACGGAGGCGTCATCTTTGCC---GATATGATTGATATCATATGATCAGCGTCCAAATTAT
GTGGCTGCGG--GCCTGCGGC------GCGACGAAACATAAACCTTTACCACAAACCGTTGGCATCAAACGACAGTCCAG
TATCCAGATTTGATCGAACCTGCGGCCCTGGACGGTTGCGCGGACGTAGCGCGCGAGGGGCCCCGGCGTAGGCCCGTGCA
TTGGTGCATGATCGGTTGACG----ACAGCCCGGCAGATACGGTGCCGAT---------CCGGCCACGGTGCCGTGCACC
GATCTGTGGTCGCGGTCGAG----GCCGCGCATGCGTGCGTCGGAAG---------------CATGCCATGC--------
--ATGATGCCACCGGCACCGGGCGCGCGCGCACGCTCGCTGGCCGCATCATGCCGGTGGCCCAGCCCGGCAAGGGCACCG
CGAGCCCACATGCCCGGAGATCTCGTCACCAGTGACTGTCTGTCCCGCTCCCACGGAATAGCTTTGGCAAGCACGCACAC
A----TGCGACCGACCAAACCAGACCGAAAAGCAGAGAGGAGGAAGCAGCGGCAAAAGCGAAGGCAAAAGAGCCTCTGCC
TGCTGTTGAGGGGCCACGCACCGAACCACAGTACCACACCCACACACAGAGGCCGCACCACACCATGCCACACCTATCCC
GCGA-CCCCGGCCGGACCCCACCATGTGCATGCAGCATTCCTTGCCCTCCGCGGGCCCCACGGCTCCCGCACACCACGCA
CCAACCCAACGCTGGCTTCC------GAGCTAGAGCTGCTAGTGGCTGGCTACGGCCACCCTCGTGCCTGGTCGTTATAT
AACACCCCGCGCCTGCGCTCCTGCCACCTCTTAGCAAAAGCGAGGCACTCTACTTACCAAAGCTACTCTGCCCGCCCCCA
CCACCTTGTCGATCGGCGA----GCGCCATGGGCAACTGCCTGAACAAGGCGTCTACGCAGCAGCAGCGCGAGATGCGGC
GGCGGCACGGCCACGGCGAGCGGGTGGCGCCGGAGGAGAGGGAGGAGGAGGAGGAGCAGCTCAGGAGCATCGGCCAGGTG
CTGCTGCAGGAGGAAGAGGAGGAGGAGGAGGAGGCG---------CCGGCGTCCGCGTCGCCGGCGGCCGGGATGAAGGT
GAAGGTGGTCCTGACGAGGGCGGAGCTGGAGTGGCTCATGGCGCAGCTCAAGAGCGGCGAGCAGCGCCTCGAGGACGTCC
TCCGCCAGATGGGCAACGCCCGCGCCGACGACTACAAGCCGCCGCGCGCCGACGCCTGGCGCCCGCGCCTCGAGTGCATC
CTCGAGTGCCCCGAGGCCGCCGACGCCACCTAGCTCCTCAACGTACACACGGCGCCCGTCCGTCCGCTCTCGATCGATCT
CCCCTCCCCGGTCACCGCGCGCGATCAGAGCTTGATCTCCTCCATGA----GCTAGTAGCTTTCTTGCTTAGATCCGTCC
GTCTCTGTGCATGGTCCATGGTGTGATCCATGGAGAGGCTTCTTGTTTTTCTGTTTCTCTCCAAAGGATCCATGA----A
GTGGT---GCTTGAGTTAGGATGAACACCAACTGTACTATGTAGCCTGTTAGAGCA---GTAGTAGCTTTTGATTTCTCA
CTGGTGA-------------------TGTACTCGTATCTGGGTTTTGCTCCGTCCGCTTGCTTTGG------------TT
TTGCCTTTCTGGTGTTGTTTGTAAATAGCGTGTGGCCAC-----------------------------------------
------------------------------------TTCGGTGGCGCAATCCACCCTTTTTAAACCTTGTATACATCCAC
ATTCGCTACTTACCATATTTCCCGCATATTAAATAC--------------------------------------------
--------------------------------------------------------------------------TGGCGC
ATGATTAAGTTTGTGAGTGGTGAAGCTCTAGC---CTACATTCCGACAGTGTATGCACAACCAGAACAACTTGGATCGAA
CGACCGGAGCAGGGTTAAAGTAGCGCC--AAAGTGT----TATTTCCCGCAACAAAAAAAGTGCACAAGAGTGCTATAGA
GCCGCTATATAGCTGTAGCATATTCTCAT-----GGAAGCAAA------AGCAGCAACCTTTGGTCAATTCTTGGCCCAG
GTTAATTT-----CCTCCCGCCGGTCGATGCATGGGTTAACA-----TACTAACAATCGAGGCGGTCAAACTTGTGCACA
TGCTTAAGCGTGATAACCTCGCATCATAGATG----------GCGTCCAAGAAAGCTGGTGGACGTGATGCTACGGCTCA
CCAGCTTTTTCAACCACGAGAGCGACGCCTCTTTGCGGGGTCGCCGCTCTGACTAATCGATCCACGTA-TGCCCGAACAA
AAACCACGCATTTCATCCATGCATCACCTATGTTTCCAACTAGTTTGCCCGTTAGATAAGTAA----AAAAACCAGTTTG
TCGCTTTCAACGAAACCACGCACGTTTGCCTGCTCGGGT-GGTCATGATCCGGGTAAAATACGGTCCAAATGTGTTTCCT
TCAAATTATAATCGTAAGTATGTACAAAAGCCGAGCCTTGAGCCATGAGCCCACCAGTCAAAGTAAATGGGGTGATAAAA
GAGGCAGCTGCGC----TGCGCACATGGTCGTCGACGGCTCGTGGTACAGTAC--GTACT---CTAGTCGTGGTTGTTGT
AGAGAAGCAGCGTACGATTCTACTACACCACTGTGCCACCGTGCAGCCAACGACCGAAGGAGGAAGAA----TACGTACG
CACGCACGTACGGTGCATCGCTCTCGGTGCCGCCTGCTACATTTCGAATTTTCGATCCGTTCCAGCAG------------
---GCCTGAATATATTTGAAACATTCCAAGTCGTTCCCCTCCGGCCGGGCGTGATGTTGGCTGCAGC----GCGAGCGCA
CTATTACCACGTGCA----CCCGTGCAGAATTC
>chr7B_1
TCGGCGTCCCTCCCCTACGGCCATGGGCCCTATCCA---------------GCACGCCACCGCCACGTACCA-------C
TGCTAGCGACCTGCATATCGACGGAGGCGTCATCCTTGCCTATGATATGAT------------ATCAGTGTCCAAATAAT
GTGGCTGCGG--GGCTGCGGC------GCGAGGAAACATAAACCTTTACCACAAACCGTTGGCATCAAACAACAGCCCAG
TATCCAGATTTGATCGAACCTGCTGCTCTGGACGGTTGCGCGGACGTAGCGCGCGAGGGGCCCCGGCGTAGGGCCGTGCA
TTGGTGCATGATCGATCGATG----ACAG-CCGGCAGATACGGTGCCGATACGGTCCACCCGGCCACGGTGCCGTGCGCC
GATCCGTGGTCGCGGTCGAGGCCCGCCGCGCACGCGTGCGTCGGAAG---------------CATGCCATGCCATGCCAT
GCATGATGCCACCG---------------GCACGCTCGCTGGCCGCATCATGCCGGTGGCCC-----GGCAAGGGCACCG
CGAGCCCACATGCCCGGAGATCTCGTCACCAGTGACTGTCTGTCCCGCTCC-------TAGCTTTGGCAAGCACGCACAC
A----TGCGACCGACCAAACCAGACCGAAAAGCAGAGAGGAGGAAGCAGCGGCAAAAGCGAAGGCAAAAGGGCCTCTGCC
TGCTGTTGAGGGGCCACGCACCGAACCCGAACCACAC-----CACACAGAGGCCGCACCACACCACACCACACCTATCCC
GTGACCCCGGCCCGGACCCCACCATGTGCATGCAGCTTTCGTTGCCCTTCGTGGGCCCCACGGTGCCCGCACACCACGCA
CCAACCCAATGCTTCCTTCCGAGCTAG---------------TGGCTGGCTACGGCCACCCTCGTGCCTGGTCGTTATAT
AACACCCCGCGCCTGCGCTCCTGCCACCTCTTAGCAAAAGCGAGCC-----ACTTACCAAAGCTACTCTGTCTGCCCC-A
CCACCTTGT---------------CGCCATGGGCAACTGCCTGAACAAGGCGTCTACGCAGCAGCAGCGCGAGATGCGGC
GGCGGCACGGCCACGGCGAGCGGGTGGCGCCGGAGGAGAGGGAGGAGCAGGAGG---AGCTCAGGAGCATCGGCCAGGTG
CTGCTGCAGGAGGAAGACGA---GGAGGAGGAGGAGGAGGAGGTCCCGGCGTCCGCGTCGCCGGCGGCCGGGATGAAGGT
GAAAGTGGTCCTGACGAGGGCGGAGCTGGAGTGGCTCATGGCGCAGCTCAAGAGCGGCGAGCAGCGCCTCGAGGACGTGC
TCCGCCAGATGGGCAACGCCCGGGCCGACGACGACAAGCCGCCGCGCGCCGACGCCTGGCGCCCGCGCCTCGAGTGCATC
CTCGAGTGCCCCGAGGCCGCCGACGCCACCTAGCTGA-CAACCTACACGCCGTCTGCTC--------------TCGATCT
CTCCTCCCCGGCCACCGT----GATCAGAGCTTGGTCTCCTCCATGCATGGGCTACTAGCTTTCTTGCTCAGATCCGTCC
GT-----------GTGCATCGTGTGATCCATGGAGAGGCTTCTTGTTTTTCTGTTTCTCTCCAAAGGATGGATCCATGGA
GTGGT---GCTTGAGTTAGGATGAACACCAACTGTACTATGTAGTAGCCTGTTAGAGCAGTAGTAGCTT--GATTTCTCA
CTGGTGA-------------------TGTACTCGTATCTGGGTTTTGCTCCGTCCGCTTGTTTTGG------------TT
TTTCCTTTCTGGTGTTGTTTGTAAATAGTGTGGCCTCAGATCAAATGGCAACGTACCGTCTGCTGCAGTTTTGAAC--CG
GATCGGATCGGATCAGCCGTGGCAATTTTAGCTCACTTTTTTTTGAACCTGATT--------AACCTTGTATACATCCAC
ATTCGCTAC----CATATTTCCCGCATACTAAATAC--------------------------------------------
--------------------------------------------------------------------------CGGTGC
ATGATTAAGTTTGTGAGTGGTGAAGCTCTACTAGTCTACATTCCGACAGTGTATGCACAACCAGAACAACTTGGATCGAA
CGACCGGAGCAGGGTTAAAGTAGCAACGCCAAAGTGCTAGTATTTCCGGCAACAAAAAAAGTGCACAAAAGTGCTATAGA
GCCGCTACATAGCTGTAGCATATTCTCATCCCATGGAAGCAAA------AGCAGCAACCTTCGGTCAATTCTTGGCC-AG
GTTAACTT-----GCTCCCGCCGGTCGATGCATGGTTAACATACTAGTACTAACAATGAAGGCGGTCAAACTTGTGCACA
TGCTTAAGCGTGATAACCTCGCATCATAGATG----------GCGTCCAAGAAAGCTGGTGGACGTGATGCTACGGCTCG
CCAGCTTTTTCAACCACGAGAGCGACGCCTCTTTGCGGGGTCGCTGCTCTGACTAACCGATCCACGTA-TGACCCGAACA
AAACCACGCATTTTCATC---CATCACCTACGTTTCCAACTAGTTTGCCCGTTAGATAAAAG---------ACCAGTTTG
TCGCTTTCAACGAAACCACGCACGTTTGCCTGCCCGGGT-GGTCATGATCCGGGTAAAATACGGTCCAAATGGGTTTCCT
TCAAATTATAATCGAAAGTATGTACAAAAGCCGAGCCTTGAGCCATGAGCCCACGAGTCAAAGTAAATGGGGTGATAAAA
GAGGCAGCTGCGCC---TGCGCACATGGTCGTCGACGGCTCTACTGGTACGTACAGTACTCTACTAGTCGTGGTTGTTGT
AGAAAAGCAGCGTACGATTCTACTACACCACTGTGCCACCGTGCCGCCAACGACCGAAGGAAGAAGAA--------TACG
CACGCACGTACGGTCCATCGCTCTCGGTGCCGCCTGCTACATTTCGAATTTTCGATCCGTTCCAGCAG------------
---GCCTGAATATATTTGAAACATTCCAAGTCGTTCCCCTCCGGCCGGGCATGATGTTGGCTGCAGC----GCGAGCGCA
CTATTACCACGTGCG----CCCGTGCAGAATTC
>chr7A_7
------TCCCTCCCCTACGTCCACGGGCCCTATCCAGCACGCGAAGGCGCGGCACGCCACCGCCACGTACGTACTACCGC
TGGTAGCGACCCGCATGTCGACGGAGGCGTCATCCTCGCC---GATATGAT------------ATCGGCGTCCAGATCAT
GTGGCTCTCAGCGCCTGCGGCGCAAGTGCGGGGAAACATAAACCTTTACCCCAAACTGTTGGCATCGGACGACAGGCCGG
TATCCAGATTTGATCGA--------CCCTGGACGGTTGCGCAGACGCAGCGCGA-------------GTAGGGCCGCGCA
TCGGTGCATGCTCGGTCGATGGATGACAG-CCGGCGTGAT-------------------------ACGGTGCCGTGCGCC
GATCCGTGGTCGCGGTCGAGGCCCGCCGCGCATGCGTGCGCCGGAAGCATGCCATGCCGTGCCATGCCATGC--------
--ATGATGCCACCGGCACCGGGCGCGCGCGCACGCTCGCTGGCCGCATCATGCCGGTGGCCC-----GGCAAGGGCACCG
CGAGCCCACATGCCCGGAGATCTCGTCACCAGTGACTGTCTGTCCCGCTCCCACGGAATAGCTTTGGCAAGCACGCACAC
ACACATGCGACCGACCGAACCAGACCGAAAAGCAGAGGGGAGGAAGCAGCGGCAAAAACCAAGGCAAAAGGGCCTCTGCC
TGCTGTTGAGGGGCCACGCACCGAACC----------------ACACAGAGGCCGCACCACACCATGCCACACCAATCCC
GCGA-CCCCGGCCGGGCCCCGCCATGTGCATGCAGCATTCGTTGGA------GGGCCCCACGGCGCCCGCACACCACGCA
CCAACCCAACGCCTCCTTCCGAGCTAGAGCTAGAGCTGCTAGTGGCTGGCTACGGCCACCCTCGTGCCCGGTCGTTATAT
AACACCCCGCGCCTGCGCTCCTGCCACCTCTTAGCAAAAGCGAGGCACTCTACTTACCGAAGCTACTCCGCCTGCCCCCA
CCACCTTGTCGATCGGCGAGCGAGCGCCATGGGCAACTGCCTGAACAAGGCGTCTACGCAGCAG---------------C
GGCGGCGCGGCCACGGCGAGAGGGTGGCGCCGGAGGTGAGGGAGGAGGAGGAGG---AGCTCAGGAGCATCGGCCAGGTG
CTGCTGCAGGAGGAAGAGGA---GGAGGAGGAGGTA---------CCGGCGTCCGCGTCGCAGGCGGCCGGGATGAAGGT
GAAGGTGGTCCTGACGAGGGCGGAGCTGGAGTGGCTCATGGCGCAGCTCAAGAGCGGCGAGCAGCGCCTCGAGGACGTCC
TCCGCCAGATGGGCAACGCCCGCGCCGACGACGACAAGCCGCCGCGCGCCGACGCCTGGCGCCCGCGCCTCGAGTGCATC
CTCGAGTGCCCCGAGCCTGCCGACGCCACCTAGCG---CAACCTACACACGGCGCCCAGCCGGCCGTTCTCTCTTCTATC
CG------------------GCGATCAGAGCTTGATCTCCTCCATGGTG----TACTAGCTTTCTTGCTCAGATCCGCCC
GT-----------GTGCATGCTGTGATCCATGGAGAGGCTTCTTGTTTTTGTGTTTCTCTCCAAAGGATGGATCCATGGA
TCGGAGTGGCTTGATCTAGGATGAACACCAACTGTACTATGTAGCCCGTTAGAGCAGTAGCAGTAGCTT--GATCTCTCA
CCTCTCACTGGTGTTTGTTGTGCACTTGTGCTCGTATGTGGGTTTTGCTCTGTCCGCTTGTTTTGGTTTTTCTTTTTCTT
TTTCCTTTTCTGTTTTGTTTGTAAATAGTGTGGCCTCAAACCAAATGGCAACGTACCGTCCGCTGCAGTTTTGCATCTCG
GATCGGACATGATCAGATGTGACAATTTTAGCTCTTTTTGGTGGCGTAATCTACCCTTTTTTATT-TTGTATACATCCAC
ATTCGCTACT-ACCATATTTCCCGCATATTAAATACGTACTGGTGCACGAATCAATCTATGGTTGGATGGTTAAAAATAC
TGTGGTATCCTCAGTTCATCAGACGTTTCTGTCAACGACGAGATGTCTACGGTGACTTTATAAATTTTACGTACTGGTGC
ATGGTTAAGTATGTGAGTGCTGAAGCT---CTAGTCTACATTCCGACAGCGTATGCACAACCAGAGCAACTTGGATCGAA
TGACCGGAGCAGAGTTAAAGTAGCACGAAAAAGTGC----TATTTCCGCCGG---AAAAAAAGCACCGAAGTGCCATAGC
CTACTGTGGC-----TAGCATATTCTCG-----TGGAAGCAAAAGCCGGAGCAGCCACCTTTGGTCAACTTTTTGCC-CG
GTTAAGTTCGTCCCGTCTCGTTGATCGATGCACGGTTAACGTACTAC----AACAATGAAGGCGGTCAAACATTTGCACA
TGCTTAAGCGT---AACCTCGCATCAACTTATTGTGCGGTTTGCGTCCAGGAAAGCGGGTCGACGTGATGCTACGGCTCA
CCAGCTTTTTCAACCGCGAGAGCGACGCCTCTTCGCGGGGTCGCCGCTCTGACTAATCAATCCAAGTAATGACCCAAACG
AACCCACGCATTTT-------CATCGCCTACGTTTCCAACTAGTCCGTCTCTTGATCTGTTATAAATAAAAACCAGCTTG
TCGCTTTCAACGAAACCACGCACGTTTGCCTGCCCGGGGCGGTCGTGATCCGGGTAAAATACGGTCCAAATGGGTTTCAA
AT---TTATAATCGAAAGCATGCATCAAAGCAGAGCCTTGAGCCACGAGCCCACGAGTCAAAGTAAATGGGGTGCTAAAA
GAGGCAGCCGCGCTGCATGCGCACATGGTCGTCGACGGCTCATGGTGCAGTAC--GTATTCTACTAGTCGTGGTTGTTGT
AGAAAAGCAGTGCACGATTCTACTGCACCACTGTGCCACCGTGCCGCCGACGACCGAAGGAGGAAGAATACGTACGTACG
CACGCACGTACGGTCCGTCGCTCTCGGCGCCGCCTGCTGCATTTCGAATTTTCGATCCGTTCGATCCATTCCAACAGGCC
TGAGCCTGAATATATTTGAAACATTCCAAGTCGTTCCCCTCCGGCCGGGCGTGATGTTGGCTCCAGCGCGAGCGAGCGCA
CTATTACCACGTGCGGCGGCCTGTGCAGAATTC
>SNPs
--S----------------------------S-----------------SS---------------------S--S-S--
----------------------------------S----------------SSSSSSSSSSSS--------------S--
-------------------------------S-------------------------------------------S----
-----------------------S------------------------------------------------S-------
----------------S--S---------S-----------------------------------------------S--
----S---------------------------------------------------------------------------
--------------------------------------------------------------SSSSS-------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S---------
---------------------------SS-SSSS---SSSSS--------------------------------------
----------------------------------------S-------S--S------------S---------------
-------------SS-----------------------------------------------------------------
------------------------------------------------------------------------S-------
--------------------------------------------------------------------------------
------------------------------------------------------SSS-----------------------
--------------------SSS-----------S---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S-----------------------------------------------
-----------------------------------SSS----S--------------SS---S---S----SS-------
-S---------S-----SSS--------------------------S--------S-------------S----------
--SSSSSSSSSSS--S-----------------------------------------------------SS--SS-----
----------------------------------------------S----------------------SS---------
------------------------------------------------------------S-------------------
--S-------------------------S---SSSS--S-----------------------------------------
--------------------------------------S-------S----S---------S------------------
----------S---------------------------------------------------------------------
-----------------------------------------------------------------------------S--
------------------------------SS------------------------------------------------
------------------------S----------S-----------S--------------------S-----------
-------S---------------------------------------------------------------------S--
-----S-----------------------------S-S-SSS---------------SS---------------------
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-----------------------------------------------------------------------S--S--SS-
-------------SSSS-SSS---------S----------------------------S--S-----------------
---------------------------------S--------------------------------------S-------
--------------S---------------------------------------S-------------------------
-----------------------------------------S----S---------------------------------
---S----------------------------------------S-----------------------------------
--------------S-----------------------------------------------------------------
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--------------S------------------
>forward_758
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------------------CACCGAACCACAGTACCACA------------------------------------------
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>reverse_2632
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-----------------------------------------------------------------------CCCGAACAA
AAACCACGCAT---------------------------------------------------------------------
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