>input_sequence_67577
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------------------------------------------ATGG----ATCCACCCGTGATGGCCGAAGTTAGTTCCA
CCAAAGAACACGTCGACCTGGAGAGGAACTCCAAGGACCTGACCATGGCTGCAGGCGACGTACAAGGTAACCCAACCAT-
-----------CTTTGAGCTGGAGATGATCGAGGCGCAAGAGGAAGAT------GCGGCGGCGGCGGCATACGACGAGAT
CGTCGCTCGATACAGGAGGAAACGCGCTGACCGTAAGGTTCGGATGACGGCT------TTAATTTAGGGTT---------
---CTTTATATATATATATATCA---------------------------------------------------------
--------------------------------------------------------------------------------
-------------GATTAATATAATTGCTAGACTATTTTGAATTTCATTACGGAATTCTAAAATAAAGCAAGTCCCCTTT
TACGCCAGGCTCGGATCGTCAAGGAGCTGGGCGAGGAGGCCTACCT------CGAGCTCGAGGGCGGGGACGACTGCCTG
GCCAACGACCCTGACTACGTGGATGAGATCAACCAGTGGATCAGGATACAAGATGAAAGGCATAAGGCGAATCTCAGGCG
T---GGCATACTTCCTGGCTACAAGAAACTTTCTGACTCCGACTTATACTTAGAAATATACTCATGCTTGCACCCGGACT
CGGAATCAGACTCGAACTCTGACTCAGAAGACAATGATGATGA------------------------TGGTGGTCATGAG
GATGAGGAGGCAGAGGAAAATTCTGACTCCA------AAGAAGAAGAAGAAGGTGAAGAAGAAGAGGGGGAG------TT
GGAGGCAGAGAAGTTTATATCTTTAGCGGAACGTAGGGCAGCGGCGGCGGAGGCAGCCCTCGGCGGGTTCGAATGGCGGA
CGGGGCCACTAGTTTTATCATGGCCATCAAAGGGAAAGAGCTGCCCGGCATTTAGGACCTGGACAACATGA---------
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-----------------------------------------------------------
>chr7A_1_TraesCS7A01G195300
GTTTACGAGAGTCCAAACCGCTCCGAAGCCCGTTTCTGACCGCCACGACCCACCAAAAACATGTGACCCGCCTCTCCCGT
GCTTTCCTTCTGATGCACACGCCGCTTACCCCACATTCATGCCGGCCTAGAGCACGCGCAGGCCAACATCGATGCCGCGA
TGTGTCTGGAGGGCGGGAGGGAAATACTGACCGACGCGACCTCTTGATAGCTGCCGCTTCCACGCGGACGCAAGTTCCCA
AGGAACCGACTCCGGCCGTTGCGCCGCATTGAAGCGGCTGACCGACCCTACGCATGGCCTGGCCGCAGCTATTTAAGCCG
CGCTCCGGCGCCGTCCACATCGCATCCTCCTCCCCCTCCCCGCCCATCACATTGCCGAAGCCGAGTGCCACACATATAGC
TTTCTGAGCCGGTGATTCATCATCGGGAGTTAAATATTTCTATCCCGAGTCCAATTAAATAAAAATTATTATTCAGGATA
AATAAAACAAAATATTTTTTGTGGGAAAAAACCCAAATATTTTCTTTGCAGCAAAGGAACAATTTTTGTGCAATATGAAT
ATTTCTATTAGATGAAGGGTAAACTTTTCGCCGTTTGAACTGATTCTAATATACAGTATATTTTTTACTTCCGTAAAGTC
AATTAGGTGAAAAACTATTTTCGGAATAAAAAAAATCGAATCAAAGCTATTGGGCCGGCTCATATATATAGGTGCACTGC
GCGCACAGGTTCTTCTTATTCGAGACTCAATGCGTACCTGCAGTTGGGCCTTGGAGCTTGAGAAGGTAGTAGCAACCTGA
CCGGACTCGATGGAGGCGTTGGTTCCGGCTCCGGCTCGTACTGCGCGTGGTTCTGGTTCCGATTCCGACCGCAGCAGAGG
AAGCCGACTCTGCTAACTAGGGTTCCCTTCCCCCTCCATCCTCTTTAAATCTGGAGGC--AGAGACTCAGGGTGAAGAAC
ACAGCTCAAATCCACAACCCGCATCGAGTCGAGACGAAGCTCATGG----ATCCACCCGTGATGGCCGAAGTTAGTTCCA
CCAAAGAACACGTCGACCTGGAGAGGAACTCCAAGGACCTGACCATGGCTGCAGGCGACGTACAAGGTAACCCAACCAT-
-----------CTTTGAGCTGGAGATGATCGAGGCGCAAGAGGAAGAT------GCGGCGGCGGCGGCATACGACGAGAT
CGTCGCTCGATACAGGAGGAAACGCGCTGACCGTAAGGTTCGGATGACGGCT------TTAATTTAGGGTT---------
---CTTTATATATATATATATCA---------------------------------------------------------
--------------------------------------------------------------------------------
-------------GATTAATATAATTGCTAGACTATTTTGAATTTCATTACGGAATTCTAAAATAAAGCAAGTCCCCTTT
TACGCCAGGCTCGGATCGTCAAGGAGCTGGGCGAGGAGGCCTACCT------CGAGCTCGAGGGCGGGGACGACTGCCTG
GCCAACGACCCTGACTACGTGGATGAGATCAACCAGTGGATCAGGATACAAGATGAAAGGCATAAGGCGAATCTCAGGCG
T---GGCATACTTCCTGGCTACAAGAAACTTTCTGACTCCGACTTATACTTAGAAATATACTCATGCTTGCACCCGGACT
CGGAATCAGACTCGAACTCTGACTCAGAAGACAATGATGATGA------------------------TGGTGGTCATGAG
GATGAGGAGGCAGAGGAAAATTCTGACTCCA------AAGAAGAAGAAGAAGGTGAAGAAGAAGAGGGGGAG------TT
GGAGGCAGAGAAGTTTATATCTTTAGCGGAACGTAGGGCAGCGGCGGCGGAGGCAGCCCTCGGCGGGTTCGAATGGCGGA
CGGGGCCACTAGTTTTATCATGGCCATCAAAGGGAAAGAGCTGCCCGGCATTTAGGACCTGGACAACATGAGCCGCCATT
ACACGTCCAAGGGGATGGAGAGAGAAGCGGAGGCTGCACGAGAAGGTAGTGGTCATGTCCCACAAGATCGACGACGAGAT
AGAGGCGTGCCCGGAACCATAACAACTCTGTTAATGTGCACCCTGTTTTATTATCTTTATTATCTGCCACATGTATTATC
TCTTTCTAGAGATGTTTATCCATATATCTATCTCTGTTCCCTTCTGCTCTTTCTAGAAACATGTCTATTTCCATGATGTA
TCTACGGGCTATGGCTGGTTATCTTTTATTTCTAGGACGACGATAACTGCCACTTGTGTGGGCGTCAAGGGATCTGCCCA
CACGTTTTGTGTGGTGTCTAAAAAGATCAGCCCACACGCCTACGTGTGGGCAAA-CAATTAACGTCCACACG-CC---T-
CTTTTATTC--C-TTGCGGT--CCATCTCACACGCCTACGTGTGGGCAAAATGCAT-----------AACGTCCACACGA
CGTCTCTCA------------ACGGT-CCCGCGCGCCCAGCGTGACAGTCACCACGCGTCTCCGCAGTTGCCATGGTTCG
GATCCTCTTCAATGTCTGTTTACCTGCAGTTGTCATGTCGCTGAACTACAGTGTCATG----------------------
----GCTCAACTGCAGTTGCCATCTCAGGTCAAGTGTCAGATGCCATTTT-GGACAACTGCAGATGTTGCCATGTATGGT
CTGATTTACTATAGTTGCAATGATTTGAAAATTTTAGAGATTGCCACCTACTAACACTAAGCAGTTGCCATGTATGGTCT
GGTTTACTACAGTTGCCATGATTTA-AAAATCTTAGGAGTTGTCACCTACTAACACTAGGCAGTTGCCGTGTAGCGCTA-
-AAGAGACATGGCAAAACAACA--TGTTCGG---------------GTAAAAGAGAGAGTTGCCATCTGCTTACAAGCAC
ACTAG---------------------------------------------------------------------------
--GG-CAGTTGCTGTGTACCCTGCA-AAACATATGGCAACTGACATGTTCGGGT---AAAAAAAG-AGAGAG--TTGCTA
TCTGCTTACAAGCACACTAGGG-CAGTTGCCATGTACAC--------------------
>chr1B_851
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--------------------------------------------------TTCTGCTTCCGATTCCGACATCAACAGAG-
AAGCCGACTGCGCTAGGGTTCCTCT-------CCTCCCTCCTCTTTAAATCTGGAGGTGGAGAGATCCAGGCTGAAGAAC
AAGCCTCAAACCCACAACCCACGCCGAATCGAGGCAAAGCTGACGTACAAATCCACCCGTGATGGCCCAAGTTAATTCCA
CCACAGATCACGTCGACCTGGAGAGGAACTCCAAGGAGCTGAGCATGGCTGCAGGCGACGCACAAGGTAACTCAACCAAC
GATCTTGACGCCTTTAAGCTGGAGCTGATCGAGGCGGAAGAGGAAGTGGCGGCGGCGGCGGCAGGGGCCTACGACGAGAT
CGTCGCTCGCTACAGGAAGAAACGCGCTGACCGTAAGGTTCGGTTGACAGACTTCACATTAATTTAGAAAAATAAGCACG
CTACTTTATGTATATAATTTCAAAAAGTATAATCTTAAAGTTCTTATTTATTTTGTAGTACCCCTTCGATCCATTTTAAT
TATCGATGGCTTATTAGTACAATGTTACATAAAACAACAGAAACAACAAAGATAAGTTGTACCAAGTCAGCGGCAATTAA
TCTGGTTAGAAGGGAGTACTGTAACTGCTAAGCAGTTTAGGATTTCATCGTGGAACTGAAAAATAAAGGAAGTCCCTTTT
TATGCCAGGCTCGGATCATCAAGGAGCTGGGCGAGGAGGCCTACCT------CGAGGC------TGGCGACGACATACTG
GCCGACGACCCCGACTACGTGGATGAGATCAACGAGTGGACCGGGATTCAAGAGGAGAGGCATAAGGCGAACCTCAGGAG
GAACGCCATACTTCCTGGCTACAAGAAACTTTCTTACTCCGACGTATACTCAGAATTATACTCATGCTTGTACCCGGACT
CGGAATCAGACTCGAACTCTGACTCGGAGA---------------------------------------------ATGAG
GATGAGGATGA---------------------------------------------------------------------
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>chr6D_1255
TATATCGGA-----------------------------------------------------------------------
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--------------ATAAGTATAATTGGTAGACAGTTTTGGATTTCACTGAGGGATTCTAAAATAAAGCACGCCCCCTTT
TACGTCAGGCTCGGATTGTCAAGGAGCTGGGCGAGGAGGCCTACCCCGAGCGCGAGGC------CGGCGACGACTGCCTG
GCCAACGA-CCCGACAACGTGGACGAGATCAACGAGTGGATGAGGATACAAGGCGAAAGACATAAGGCAAATCTCAGGCG
T---GCCATACTTCCTGGCTACAAGAAACTAGCTGGCTCCAACTTATACTTGGAAATATACTCATGCTTGCACCCGGAC-
------------CGGAATCCGACTCGGAAGAAAATGATGATGGCGACGACAACGACAACGATGATGGTGGTGGTGATGAG
GATGAGGAGGCAGAGGAAGATTCTGACTCCAAAGAAGAAGAAGAAGAAGAAGGTGAAGAAGAAGAGGGGGAGGAGGAGTT
GGAGGCAGAGAAGTTTATATCTTTAATG----GTAGGGCAGCGGCGGCGGAGGCAGCCCTCGGCG---------------
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>chrUn_2105
TCTTTTGTCTTT--------------------------------------------------------------------
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----------------------------------GGACGACGATAACTGCCACATGTGTGGGCGTTAAGGGGTCTGCCCA
CACATTTTGTGTGGTGTCTAAGAGGAACAGCCCACACGCCTACCTGTGGGCAAAACAACTAGCGCCCACACA-CCTCTT-
TTTT--TC---C-TCGCGGT--CCCTCTCACACGCCTACGTGTGGGCAAAATGGAT-----------AACGCCCACACGA
CCTCTCTCAGCCACCTACTTCA-GGGGCCCGCACGCCCTGCGTGACAGTCACCACGCGTCCCCGCAGTTGCCATGGTCCG
GACCCTCTTCAATGTCCGTTTAACTGCAGTT----------------------GCCCTGTCGGACAACTACAGTTGCCAT
GGTTGCTCAACCGCAGTTGCCATCTCAGGTCAAGTGCCAACTGCCATTTT-CGACAACTGCAGCTGTTGCCATGTATGGT
CTGGTTTACTATAGTTGTCATGATTTGAAAATTTTAGGGGTTGCCACCTACTAATACTAGGCAATTGCCATGTATGGTCT
GGTTTACTACAGTTGTCATGATTTA-CAAACCTTAGGAGTTGCCAGCTACTAACACTAGGCAGTTGCCGTATAGCGCTAC
AAAGAGACATGGCAAAAAAAAACATGTTTCG---------------GGTAAACAGAGAGTTGCCATCTGCTTACAAGCAC
ACTAG---------------------------------------------------------------------------
--GG-CAGTTGCCGTGTACCCTGTA-AAACACATGGCAACTGACATGTTCGGGT---AAAAAAAG-AGAGAG--TTGCCA
TCTACTTACAAGCACACAAGGGATAGTTGCCATGTACAC--------------------
>chrUn_2105
TCTTTTGTCTTT--------------------------------------------------------------------
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----------------------------------GGACGACGATAACTGCCACATGTGTGGGCGTTAAGGGGTCTGCCCA
CACATTTTGTGTGGTGTCTAAGAGGAACAGCCCACACGCCTACCTGTGGGCAAAACAACTAGCGCCCACACA-CCTCTT-
TTTT--TC---C-TCGCGGT--CCCTCTCACACGCCTACGTGTGGGCAAAATGGAT-----------AACGCCCACACGA
CCTCTCTCAGCCACCTACTTCA-GGGGCCCGCACGCCCTGCGTGACAGTCACCACGCGTCCCCGCAGTTGCCATGGTCCG
GACCCTCTTCAATGTCCGTTTAACTGCAGTT----------------------GCCCTGTCGGACAACTACAGTTGCCAT
GGTTGCTCAACCGCAGTTGCCATCTCAGGTCAAGTGCCAACTGCCATTTT-CGACAACTGCAGCTGTTGCCATGTATGGT
CTGGTTTACTATAGTTGTCATGATTTGAAAATTTTAGGGGTTGCCACCTACTAATACTAGGCAATTGCCATGTATGGTCT
GGTTTACTACAGTTGTCATGATTTA-CAAACCTTAGGAGTTGCCAGCTACTAACACTAGGCAGTTGCCGTATAGCGCTAC
AAAGAGACATGGCAAAAAAAAACATGTTTCG---------------GGTAAACAGAGAGTTGCCATCTGCTTACAAGCAC
ACTAG---------------------------------------------------------------------------
--GG-CAGTTGCCGTGTACCCTATA-AAACACATGGCAACTGACATGTTCGGGT---AAAAAA-G-AGAGAG--TTGCCA
TCTACTTACAAGCACACAAGGGATAGTTGCCATGTACAC--------------------
>chr4D_2109
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-------------------------TTAGTTATAGGACGACGATAACTGCCACACGTGTGGGCGTTAAGCGGTCTGCCCA
CACGTTTTGTGTGGTGCCTAAGAGGACCAGCCCACACGCCTATGTGTGGGCAAAACAACTAGCGTCCACACG-CCTCTT-
TTTT--TCC--C-TTGCGGT--CCCTTTCACACGCCTACGTGTGGGCAAAATGCAT-----------AACGCCCACACGA
CCTCTCTCAACAACCTACCTCC-GGT-CCCGCACACCGAGCGTGACAGTCACCACGCGTCCCCGCAGTTGCCATGGTCCG
GACCCTCTTCAATGTCCGTTTACCTGCAGTTGCCATGTTGCTGAACTACAGTTGCCATGTCGGACAACTACAGTTGCCAT
GGTTGCTCAACTGCAGTTGCCATCTCTGGTCAAGTGCCAGATGCCATTTT-GGACAACTGCAGCTGTTGCCATGTATGGT
-TGGTTTACTATAGTTGTCATGATTTGAAAACTTTAGAGGTTGCCACCTACTAACACTAAGCAGTTGCCATGTA------
-------------------------------------------------------------------------GCGCTAC
AAAGAGACATGACAAAACAACA--TGTTCGG---------------GTAAAAGAGAGAGTTGCCATCTGCTTACAAGCAC
ACTAG---------------------------------------------------------------------------
--GGGCAGTTGCCGTGTACCCTGCA-AAACATATGGCAACTGACATGTTGGGGTTAAAAAAAA-G-AGAGAG--CTGCCA
TCTGCTTGCAAGCACACTAGGG-CAGTTGCCATGTACACTGCAAAACGCATGGCAACTG
>chr6D_2116
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--------------------------------TAGGACGACGATAAGTGCCACACGTGTGGGCGTTAAGGGGTCTGCCCA
CACGTTTTGTGTGGCGTCTAAGAGGACCAGCCCACACGCCTACGTGTGGGCAAAACAACTAGCGCCCACATG-CT---T-
CTTTTTTTC--CCTTGCGGTCCCTCTCTCACACACCTACGTGTGGGCAAAATGCAT-----------AACGCCCACACGA
CCTCTCTCAGCCACCTACCTCATGGT-CCCGCACACCCCGCGTGACAGTCACCACACGTCCCCGTAGTTGCCATGGTCCG
GACCCTCTTCAATGTCCGTTTAACTGCAGTT----------------------GCCATGTCGGACAACTACAGTTGCCAT
GGTTGCTCAACTGTAGTTGCCATCTCAGGTCAAGTGCCAGATGCCATTTT-GGACAACTGCAGCTGTTGCCATGTATGGT
CTGGTTTACTATAGTTGCCATGATTTGAAAACTTTAGAGGTTGCCACCTACTAACACTAAGCAGTTGCCATGTATGGTCT
AGTTTACTACAGTTGCCATGATTTG-AAAACCTTAGGAGTTGCCACCTACTAACACTAGGCAGTTGCCGTGCAGCGCTAC
AAAAAGACATGGCAAAACAACA--TGTTCGG---------------GTAAAAAAGAGAGTTGCCATCTGCTTACAAGCAC
ACTAG---------------------------------------------------------------------------
--GG-CAGTTGCCGTGTACCCTGCA-AAACACATGGCAACTGACATGTTCGGGT---AAAAAAAG-AGAGAG--TTGCCA
TCTGCTTAAAAGCACGCTAGGG-CAGTTGCCATGTACAC--------------------
>chr2D_2116
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--------------------------------TAGGACGACGATAACTGCCACACGTATGGGCGTTAAGGGGTCTGCCCA
CACGTTTTGTGTGGTGTCTAAGAGGACCAGCCCACACGCCTACGTGTGGGCAAAACAACTAGCGCCCACACG-CCTCTT-
TTTT--TCC--C-TTGCGGT--CCCTCTCACACGCCTACGTGTGGACAAAATGCAT-----------AACGCCCACACGA
CCTCTCTCAGCCACCTACCTCACGGT-CCCGCACGCCCAGCGTGACAGTCACCACGCGTCCCCGCAGTTGCCATGGTCCG
GACCCTCTTCAATGTCCGTTTACCTGCAGTTGCCATGTCGCTGAACTACAGTTGCCATGTCGGACAACTACAGTTGCCAT
GGTTGCTCAACTGCAGTTGCCATCTCAGGTCAAGTGCCAGATGCCATTTT-GGACAACTGCAGCTGTTGCCATGTATGGA
CTGGTTTACTATAGTTGCCATGATTTGAAAACTTTAGAGGTTGCCACATACTAACACTAAGCAGTTACCATGTATGGTCT
GGTTTACTAGAGTTGCCATGATTTG-AAAACCTTAGGAGTTGCCACCTACTAACACTAGGCAGTTGCCGTGTAGCGCTAC
AAAAAGT-------------CA--TGTTCGG---------------GTAAAAGAGAGAGTTGCCATCTGCTTACAAGCAC
ACTAG---------------------------------------------------------------------------
--GG-CAGTTGCCGTGTACCCTGCA-AAACATATGGCAACTGACATGTTCGGGT---AAAAAAAA-AGAG----TTGCCA
TCTGCTTACGAGCACACTAGGG-CAGTTGCCATGTACAC--------------------
>chr7D_2116
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--------------------------------TAGGACGACGATAACTGCCACACGTGTGGGCGTTAAAGGGTCTGCTCA
CACGTTTTGTGTGGTGCCTAAGAGGACCAGCCCACACGCCTATGTGTGGGCAAAACAATTAGCGCCCACACG-CC---T-
TTTT--TTC--C-TTGCGGT--CCCTCTCACACGCCTACGTGTGGGCAAAATGCAT-----------AACGCCCACACGA
CCTCTCTCAGCCACCTACCTCACAGC-CCCGCACGCCCCGCGTGACAGTCACCACGCGTCCCCGCAGTTGCCATGGTTCG
GACCCTCTTCAATGTCCGTTTACCTGCAGTTGCCATGTCGCTGAACTACAGTTGCCATGTCGGACAACTGCAGTTGCCAT
GTTTGCTCAACTGCAGTTGCCATCTCAGGTCAAGTGCCAGATGCCATTTT-GGACAACTGCAGCTGTTGCCATGTATGGT
CTGGTTTATTATAGTTGCCATGATTTGAAAACTTTAGAGGTTGCCACCTACTAACACTAAGCAGTTGTCATGTATGGTCT
GGTTTACTACAGTTGCCATGATTTG-AAAACCTTAGGAGTTGCCACCTACTATCAGTAGGCAGTTGCCGTGTAGCGCTAC
AAAGAGACATGGCAAAACAACA--TGTTCGG---------------GTAAAAGAGAGAGTTGCCATCTGCTTACAAGCAC
ACTAG---------------------------------------------------------------------------
--GA-CAGTTGCCGTGTACCCTGCA-AAACACATGGCAACTGACATGTTCGAGT---AAAAAAAG-AGAGAGAGTTGCCA
TCTGCTTACAAGCGCACTAGGG-CAGTTGCCATGTACAC--------------------
>chr3A_2116
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--------------------------------TAGGACGACGATAACTGCCACACGTGTGGGCATTA--GGGTCTGCCCA
CAAATTTTGTGTGGTGTTTAAGAGGACCAACTCACACGCCTACGTGTGGGCAAAACAATTAGCGTTCGCACTTCT--CT-
TTTC--TTC--C-TTACGGT--CCTTCTCACACGCCTACGTGTGGGCAAAATGCAT-----------AACGCCCACACGA
CCTCTCTCAGTCACCTACCTCACGGT-CCCGCACGCCCCACGTGACAGTCACCACGCGTCCCCGCAGTTGCCATGGTCCG
GACCCTCTTCAATGTCCGTTTACTTGCAGTTGCCACGTCGTCG----------------------AACTACAGTTGCCAT
GGTTGCTCAACTGCAGTTGCCATCTCAGGTCAAGTGCCAGATGCTATTTT-GGACAACTGCAGTTGTTGCCATGTATGGT
CTGGTTTGCTATAGTTGCCATGATTTGAAAACTTTAGAGGTTGCCACCTACTAACACTAAGCAGTTGCCATGTATGGTCT
GGTTTACTACAGTTGCCATGATTTG-AAAAGATTAAGAGTTGTCACCTACTAACACTAGGCAGTTGTCGTGTAGCGCTAC
AAAGAGACATGGCAAAACAACA--TGTTCGG---------------GTAAAAGAGAGAGTTGCCATCTGCTTACAAGCAC
ACTAG---------------------------------------------------------------------------
--GG-CAGTTGCCGTGTACCCTGCA-AAACACATGTCAACTGACATGTTCGGGT---AAAAAAAA-AGAGAG--TTGCCA
TCTGCTTACAAGCACACTAGGG-CAGTTGCCATGTAC----------------------
>chr2A_2116
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--------------------------------TAGGACGACGATAACTACCACACCTGTGAGCGTTAAGGGATCTGCCCA
CATATTTTGTGTGGTGTCTAAGAGGACCAGCTCACACGTCTACGTGTGGGCAAAACAACTAGCACCCACACG-CC---T-
CTTTTTTTC--C-TAACGGT--TCCTCCCACACGCATACGTGTGGGCAAAATGCATAACGCCCACACA-----------A
CCTCTCTCAGCCACCTACCTCACGGT-CCCGCACGCCCAGCATGACAGTCACCACGCGTCCCCGCAGTTGCCATGGTTCG
GACTCTCTTCAATATCCGTTTACTTGCAGTTGCCATGTCGCTG----------------------AACTACAGTTGTCAT
GGTTGCGCAACTGCAGTTGTCATCTCAGGTCAAGTGCCAGATGCCATTTT-GGACAACTGCAGTTGTTGCCATGTATGGT
CTGGTTTTCTATAGTTTTCATGATTTGAAAACTTTAGAGGTTGCCACCTACTAACACTAAGCAGTTGCCATGTATGGTCT
GGTTTACTATAGTTGCCGTGATTTGAAAAC-CTTAGGAGTTGTCACCTACTAACATTAGGCAGTTGCCGTGTAGCGCTAC
AAAGAGACATGGCAAAACAACA--TGTTTGG---------------GTAAAAGAGAAAGTTGCCATCTGCTTACAAGAAC
ACTAG---------------------------------------------------------------------------
--GG-CAGTTGCCGTGTACCCTGCA-AAATATATGGCAACTGACATGTTCGGGT---AAATAAAA-AGAA----TTGCCA
CCTGCTTACAAGCACACTAGGG-CAGTTGCCATGTACAC--------------------
>chr5D_2116
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--------------------------------TAGGACGACGATAACTGTCACACGTGTGAGCGTTAAGGGGTCTGCGCA
CACGTTTTGTGTGGTGTCTAAGAGGAACAACCCACGCGCCTACGTGTGGGCAAAACAACTAGCGCCCACACA-CC---T-
TTTT--TCTCTC-TCGCGGT--CCCTCTCACACGTCTACGTGTGGGCAAAAAGGAT-----------A-----------A
CCTCTCTCAGCCACCTACCTCACGGT-CCCGCACACCCCACGTGACAGTCACCACGCGTCTCCGCAGTTGCCATGGTCTG
GACCCTCTTCAATGTCCGTTTAACTGCAGTTGCCATGTCGCTGAACTACAGTTGCCATGTCGGACAACTACAGTTACCAC
GGTTGCTCAACTGCAGTTGCCATCTCAGCTTAAGTGTCAGATGCCATTTT-GGACAACTGCAGTTGTTGCCATGTATGGT
CTGGTTTACTATAGTTGCCATGATTTGAAAACTTTAGGGGTTGCCACCTACTAACACTAGGCAGTTGCCATGTATGGTCT
GGTTTACTACAGTTGCCATGATTTG-AAAACCTTAGGATTTGCCACCTACTAACACTAGGCAGTTGTCATGTAGCGCTAC
AAAGAGACATGGCAAAATAAAA--TGTTTCG---------------GGTAAAGAGAGAGTTGACATCTGCTTACAAACAC
ACTAG---------------------------------------------------------------------------
--GG-CAGTTGCCGTGTACCCTGCA-AAACACATGGCAACTAACATGTTCGGGT---AAAAAAA----AGAG--TTGCCA
TCTGCTTACAAGCATACTAGGG-TAGTTGCCATGTACAC--------------------
>chr2B_2116
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--------------------------------TAGGACGCCTATAACGCCCACACGTGTGGGCGTTAAGGGGTCTGCCCA
CACTGTTTATGTGGTGTTTAAGAGGATCAGCCCACACGCCTACGTGTGGGCAAAACAAGTAATGCCCACATGCTT--TG-
TTTT--TTTT-T-CCGCGGT--CCCTCTCACATGCCTACGTGTGAGCAAAATAGAT-----------AACGCCCACACGC
CCGTACGTCAGGCCT----------C-CCCGCACGCCCCGCGTGACAGTCACTA-GCGTCCCCTGAGTTGCCATGATCTG
CACCCTCTTCCATGTTCATTTAACTGAAGTTGCCATGTCGCTGAACTATAGTTGCCATGTCGGACAACTACAGTTGCCAT
GGTTGCTCAACTGCAGTTGCCAT--------------------------------------------------GTATGGT
CTGGTCTACT--------------------------------------------------GCAGTTGCCATGTATGGTCT
GGTCTACTGTAGTTGCCATGATTTC-AAAA-CTTAGGAGTTGCCACCTACTAACACTAGGCAGTTG--------------
--AGAGAGTTGACATGTGCTCACAAGTACACTAGGGCAGTTGCCATGTAAAAAAAAGAGTTGTCATCTGCTTACGTGCAC
GCTAGGGCAGTTGCCATGTACCATGCAAAAACAGATGGTAACTCGGGTAAAAGAGAGTTGCCATATGCTTACGTGCACAC
TAGA-CAGTTGCCGTGTACCCTGCA-AAACACATGACAACTAACATGTTCGGGT---AAAGAAA----AGAG--TTGCCA
TCTGCTTACAAGCACACTAGGG-CAGTTGCCATGTACAC--------------------
>chr4D_2117
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---------------------------------AGGACAACGATAACGGCCACACGTGTGGGCGTTAAGAAGTCTGCCCA
CATGTTTTGTGTGGTGTCTAAGAGGACCAGCCCACATC--------TAGGCAAAACAACTAGCGTCCACACGTCT--CT-
TTTT--TCC--C-TTGCGGT--CCCTCTCACACGCCTACGTGTGGGCAAAATGCAT-----------AACGCCCACACGA
CCTTTCTCAGCCACCTACCTCACGGT-CCCGCGCTCCCAGCGTGACAGTCACCACGCGTCCCCGCAGTTCCCATGGTTCG
GACCCTCTTCAACGTCCGTTTACCTGCAGTTGCCATGTCGCTG----------------------AACTACAGTTGCCAT
GGTTGCTCAACTGCAGTTGCCATCTCAGGTCAAGTGCCAGATGCCATTTT-GGACAACTGCAGCTATTGCCATGTATGGT
CTGATTTACTATAGTTGCCATAATTTGAAGACTTTAGAGGTTGCCACCTAGTAACACTAAGCAGTTGCCATGTATGGTCT
GGTTTACTACAGTTGCCATGATTTG-AAAACCTTAGGAGTTGCCACCTACTAACACTAGGCAGTTGCCGTGTATCGCTAC
AAAGAGACATGGCAAAACAACA--TGTTCGG---------------ATAAAA-AGAGAGTTGCCATCTGCTTACAAGCAC
ACTAG---------------------------------------------------------------------------
--GG-CAGTTGCCGTGTACCCTGCA-AAACATATGGCAACTGACATGTTCGGGT---AAAAAAAAGAG------TTGCCA
CCTACTTACAAGCACACTAGGG-CAGTTGCCATGTACAC--------------------
>chr6D_2118
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----------------------------------GGACGACGATAACTGCCACACGTGTTGGTGTTAAGGGGTCTGCCCA
CACGTTTTGTGTGGTGTCTAGGAGGACCAACTCACACGCCTATGTGTGGGCAAAACAACTACCGCCCACACGTCT--TT-
TTTT--TCC----TTGCGGT--CTCTCTCACACGCCTACGTGTGGGCAAAATGCAT-----------AACACTCACACGA
CCTCTCTCAGCCACCTACCTCACGGT-CCCGCACGCCCTGCGTGAAAGTCACCACGCGTCCCCGCAGTTGCCATGGTCCG
AACCCTCTTCAATGTCCGTTTAACTGCAATTGCCATGTCGCTG----------------------AACTACAGTTGCCAT
GGTTGCTCAACTGCAGTTGCCATCTCAGGTCAAGTGCCAGATGCCATTTT-GGACAACTGCAACTGTTGCCATGTATGGT
CTGGTTTACTATAGTTGCCATGATTTGAAAATTTTAGAGGTTGCCACCTACTAACACTAAGCAGTTGCCATGTATTGTCT
GGTTTACAACAGTTGCCATGATTTGAAAAC-CTTAGGAGTTGCCACCTACTAACACTAGACAGTTGCCGTGTAGCGCTAC
AAAGAGACATGGCAAAACAACA--TGTTCGG---------------GTAAAAGAGAGAGTTGTCATCTGCTTACAAGCAC
ACTAG---------------------------------------------------------------------------
--GG-CAGTTGCCGTGTACCCTGCA-AAACACATGGCAACTGACATGTTCGGGT---AAAAAAAAGAGAGAG--TTGCCA
TCTGCTTACAAGCACACTAGGG-CAGTTGCCATGTACAC--------------------
>chr2D_2118
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----------------------------------GGACGACGATAACTGCCACACGTGTGGGCGTTAAGGGGTCTGCCCA
CACGTTTTGTATGGTGTCTAAGAGGACCAGCCCACATGCCTACGTGTGGGCAAAACAACTAGCGCCCACACGTCC---TC
TTTT--TTTC-C-TTGCGGC--CCCTCTCACACACCTACGTGTGGGCAAAATGCAT-----------AACGCCCACATGA
CCTCTCTCAACCACCTACCTCACGGT-CCCGCACACTCAGCGTGACAGTCACCACGCGTCCCCGCAGTTGCCATGGTCCG
GACCCTCTTCAATGTCCGTTTACCTGCAGTTGCCATGTCGCTG----------------------AACTACAGTTGCCAT
GGTTGCTCAACTGCAGTTGCCATCTGAGGTCAAGTGCCAGATGCCATTTT-GGACAACTACAGCTACTGCCATGTATGGT
CTGGTTTACTATAGTTGCCATGGCATGAAAATTTTAGAGGTTGCCACCTACTAACACTAAGCAGTTGCCATGTATGGTCT
AGTTTACTACAGTTGCCATGATTTGAAAAC-CTTAGGAGTTGCCACCTACTAACACTAGGAAGTTGCCGTGTAGCGCTAC
AAAGAGACATGGCAAAACAACA--TGTTTGG---------------GTAAAAGAGAGAGTTGCCATCTGCTTACAAGCAC
ACTAG---------------------------------------------------------------------------
--GG-CAGTTGCTGTGTACCCCTGACAAACATATGGCAACTGACATGTTCGGGT---AAAAAAAAGAGA--G--TTGTCA
TCTGCTTACAAGCACACTAGGGGCAGTTGCCATGTAC----------------------
>chr7D_2118
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----------------------------------GGACGACGATAACTGCCACACGTTTGGGCGTTAAGGGGTCTGCCCA
CACGTTTTGTGTGGTGTCTAAGAGGACCAGCCCACATGCCTATGTGTGGGAAAAACAACTAGCGCCCACACG-CC---TC
TTTT--TTC--C-TTGCGGT--CCCTCTCACACGCCTACGTGTGGGCAAAATGCAT-----------AACGCCCACACGA
CCTCTCTCAGCCACCTACCTCACGGC-CCTGCACGCTCCGCGTGACAGTCACCACGCGCCCCCGCAGTTGCCATGGTCCG
AACCCTCTTCAATGTCCGTTTAACTGCAGTTGCCATGTCG----------------------GACAACTACAGTTGCCAT
GGTTGCTCAACTGCAGTTGCCATCTCAGGTCAAGTGCCAGATGCCATTTT-GGACAACTGCAGCTGTTGCCATGTATGGT
CTGGTTTACTATAGTTGCCATGATTTGAAAACTTTAGAGGTTGCCACTTACTAACACTAAGCAATTGCCATGTATGGTCT
GGTTTACTACAGTTGCCATGATTTGAAAAC-CTTAGGAGTTGCCACCTACTAACACTAGGTAGTTGCCATGTAGCGCTAC
AAAGAGACATGGCAAAACAACA--TATTCGG---------------GTAAAAGAGAGAGTTGCCATCTGCTTACAAGGAC
ACTAG---------------------------------------------------------------------------
--GG-CAGTTGCCGTGTACCCTGCA-AAACACATGGCAACTGACATGTTCGGGT---AAAAAAAAGAGAGAG--TTGCCA
TCTGCTTACAAGCACACTAGGG-CAGTTGCCATCTACAC--------------------
>chr5D_2118
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----------------------------------GGACGCCGATAACGCCCACACGTATGGGCGTTAAGGGCTCTGCCCA
TACATTTTGTATGGTGTCTAAGAGGATCAGG-----------CGTGTGGGCAAAACAACTAGCGCCCACGCG-CC---TC
TTTT--TTCC-C-TTACGGT--CCTTCTCACACGCCTATGTGTGGGAGAAATGCAT-----------AACGCCCACAGGA
CCTCTCTCAGCCACCTACCTCACGGT-CCCGCACGCCCAACGTGATAGTCACCACGCGTCCCCGCAGTTGCCATGGTCCG
GACCCTCTTCAATGTCCGTTTACCTGCAGTTGCCATGTCGTTG----------------------AACTACAGTTGCCAT
GGTTGCTCAACTGCAGTTGCCATTTCAGGTCAAGTGCCAGATGCCATTTTTGGACAACTGCATCTGTTGCCATGTATGGT
CTGGTTTACTATAGTTGCCATGATTTGAAAACTTTAGGGGTTGCCACCTACTAACACTAAGCAGTTGCCATGTATGATCT
GGTTTACTACAGTTGCCATGGTATGAAAAT-CTTAGGAGTTGCCACCTACTAACACTAGGCAGTTACCGTGTAGCACTAC
AAAGAGACATGGCAAATCAACA--TGTTCGA---------------GTAAAAGAGAGAGTTGCCATCTGCTTACAAGCAC
ACTAG---------------------------------------------------------------------------
--GT-CAGTTGCCGTGTACCCTGCA-AAACATATGGCAACTGACGTGGTCGGGT---AAAAAAAA-ATAGAG--TTGTCA
TCTGCTTACAAGCACACTAGGG-CAGTTGCCGTGTACAC--------------------
>chr3D_2228
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-----------------------------------------------------------------CCACACG-CC---TC
TTTT--TTCC-G-TTGCGGT--CCCTCTCATATGCCTACGTGTGGGCAAAATGCAT-----------AACGCCCACACGA
CCTCTCTCAGCCACCTACCTCACGGC-CCCGCACGCCCAGCGTGACAGTCACCACGCGTCCCCGCAGTTGTCATGGTCCG
GACCCTCTTCAATGTCCGTTTACCTACAGTTGCCATGTTGCTG----------------------AACTACAGTTGCCAT
GGTTTCTCAACAACAGTTGCCATCTCAGGTCAAGTGCCAGATGCCATTTT-GGACAACTGCAGCTATTGCCATGTATGGT
CTGGTTTACTATAGTTGCCATGATTTGAAGACTTTAGAGGTTGCCACCTACTAACACTAAACAGTTGCCATGTATGGTCT
GGTTTACTACAGTTGCCATGGTTTGAAAAC-CTTAGGAGTTGCCACCTACTAACACTAGACAGTTGCCGTGTCGCACTAC
AAAGAGACATGGCAAAACAACA--TGTTCGG---------------GTAAAA-AGAGAGTTGCCATCTACTTACAAGCGC
ACTAG---------------------------------------------------------------------------
--GG-CAGTTGCCGTGTACCCTACA-AAACATATGGCAACTGGCATGTTTGGGT----AAAAAAAGAGAGAG--TTGCCA
TCTGCTTACAAGCACACTAGGG-CAGTTGCCGTGTACAC--------------------
>SNPs
SS--S--SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S-------------SS--S-----S
---------SS----SSSSSSS-SSSSSSSSS-----S-------------------S-------SS----S--------
-SSS------S---------S-SS---S-----S-S-----S-S-S---------------------S------S-----
---S---S-----------------------------S----S-----------------S----------S------S-
---------------S--------S-----------S---------SS--------------S-S---S-----------
---------S-------S-------------------------S----S-SS---------------SSSS---------
---------S------SS-SSS----------------------------------------------------------
--------------------------------------------------------------------------------
------------------S--------------SS-----S--------SS-----------------------------
--------------------------------------------------------SSSSSSSS---S------------
-----------S---------------------S-------------------S--------------------------
-----S--------------------------------------------------------------------------
-------------------------S-----S----------S-------------------------------S-----
------------------S-------------------------------------------------------------
-------------------------SS-SSSS---------------------------------SSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSS---S--S---------------------S-----------S--------------
---------------------S-S--------------------------------------------------------
-----S------------------S----------------------------------------------S--------
-S------------------------------------------------------------------------------
--S-------------S---------------S-------------------SS-SSS----------------------
---------------------------------------------------------------S----------------
------------------S--------------------S----------------------------------------
------------------------------S-------------------------------------------------
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------------------------------------------------------------------------------S-
-----------------------------------------------------------
>forward_705
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---------------------------------------------GCTATTGGGCCGGCTCATAT---------------
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>reverse_2150
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---------------------------------------------------------------------GACGACGAGAT
AGAGGCGTG-----------------------------------------------------------------------
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-----------------------------------------------------------
