>input_sequence_67553
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-------------------------------------------------------ATGAAGATTACCGTGATCGTCTTGT
CCGTCGTGGTAGCATTGTTTGGGGTCGCAAGTGCCGTCCTGGGGTTCATCGCCGAGGGCACCAAGCTCACGGTAAGCAT-
-------------------GTACACTGGTAGTGGCTCCGTCCATCTCAAGCAAACTGAACTGACCAGCGCGCTTGCGGTG
-CTCGTGGCGCGCAGCGGAATGACATTGAGGTG---TACAGCAACGAGTGCGTGTACCCTGACAACCCGGCATACGCGCT
GGGGTTACTGGCGGCCCTCCTGCTACTGTTGGCCCAGATCACCGCCTCGGCCGTCGGCGGTTGCTGCGGCCGCTGCATGC
CTCGGGGCGCCGGCTTCTCCAGGTCCAAGGCCGTTGCCAAGTCCAAGCGGGCCA------TTGGCGCCGCCCTCTGCGTC
CTCTCATGGTGAGCTGAGCTAAGCTTCCG---TGCTCATAGTCCATCCATTCCTGAC-----------------------
--AGGCATGTCGAGGGTTCGACCGA-----------GGTGACGGCCAATCCAACGGGCGATGAACATGCTGGCGTTGAGT
GTGTGCAGGATAATGGCGTTGATCGCGGAGCGGTTCTTCTTGGTAGGTGCGGCGGCGAACATCCCCATGACGCGCGAAAC
TAGCCAGGGCCGGGGGTGTCACGCCGTCAAGGACGGCGTCTTCATGATGGGGGCCATTCTCAGCATCGTCGCCACCGTGC
TCGGGATCGTATCTTACATCATGCTTTA------C---GCGGCGGCGGCTGGTGCTACTACTACC---------ATGGGG
GCCGTGGCGGGGCCGTCGTCGGCAGGCGAGATCAGGCTTGACGGGATCGCGATCGGCCACCCTGTTGCTGCTCAACAACA
CGCACAAGCTGTG----TAG------------------------------------------------------------
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>chr1D_1_TraesCS1D01G271600
CATGCGAGGCCGCGGAGGATGGCCGCGCGATCGTCCGGTGAGCACGGGATCGGAGAAGCATCGCACTTTGCGAAGTTGGT
GTGGAGGCCTGAGGCGACGCCATAGACCCGAAGAAGCTCACGGACCAC-GCGAGGTCGTGCTCGTCCGGATGGCAGAAGA
TGATGATGTCATCAGCATAAAGGGAGATGCTAGATGCCATGTGGCGCGGGGTAAGGCGGCGAAGAATGCCGTCGGCGACG
GCCCGCTCGAGCAGCCTGTCCAAGACGTCAATGACCAGTACGAAAAGCATGGG-GAAACAGGGTCACCCTGGCGAAGCCC
CTTGCGGTGCGCAACAGGAGGCCCAGCGCAGCCGTTGAGGAGGACCCGAGTGCTCGCCATGCCTAGGAGGATGAAGATCC
ACTCCCTTCAGCACGGGCCAAAACCCAAATGACGCAAAATGTCGAGGAGGAAGGGCCAAGAGACCGAGTCGAACGCGCGG
GCGATGTCTAGCTCGAGCCTGACGCGAGCCAGCTTGAGGTTGTGGAGGCGGCACGTCGTTTGTTGCACGAGTAGGAAATT
GCCGTGGATACACTTGCCGGTGATGAAAGCACTTTGGTTCGTCGAGATCATCTCGCCAAGGCTTCCAAAACGTGGGCTTC
CAAAACACTCGTAATCAGCGGGCAGCATCAATTTAACTTGGCAGATGCACACGTCCTGCGTTGCTAGATGTCTACGTAAT
CAGGCTTTGTCGTGAGATGATCCTTTTCGGATACGACTATGTACGATC--GTCAGCCTTAGCCTTGCGGTCATCGCCAGC
CGGTGCGAGACGATGCTTGCGGACAAGAGAGTA-G-TACGCGTGA--AGGCACCTTCGTGGAAAACCTAATA-GCC----
--TGGCCGACCTCATAAGCGTCCTCTATATAAGCATCAGAACATTTGATCATGGCTTTTATACCCATCCATCACCTCACG
CAGTCACTATCTCGGACGACGGACCAAAAAAGGAAGTCGTGAAGTTGTTAGAGAAATGAAGATTACCGTGATCGTCTTGT
CCGTCGTGGTAGCATTGTTTGGGGTCGCAAGTGCCGTCCTGGGGTTCATCGCCGAGGGCACCAAGCTCACGGTAAGCAT-
-------------------GTACACTGGTAGTGGCTCCGTCCATCTCAAGCAAACTGAACTGACCAGCGCGCTTGCGGTG
-CTCGTGGCGCGCAGCGGAATGACATTGAGGTG---TACAGCAACGAGTGCGTGTACCCTGACAACCCGGCATACGCGCT
GGGGTTACTGGCGGCCCTCCTGCTACTGTTGGCCCAGATCACCGCCTCGGCCGTCGGCGGTTGCTGCGGCCGCTGCATGC
CTCGGGGCGCCGGCTTCTCCAGGTCCAAGGCCGTTGCCAAGTCCAAGCGGGCCA------TTGGCGCCGCCCTCTGCGTC
CTCTCATGGTGAGCTGAGCTAAGCTTCCG---TGCTCATAGTCCATCCATTCCTGAC-----------------------
--AGGCATGTCGAGGGTTCGACCGA-----------GGTGACGGCCAATCCAACGGGCGATGAACATGCTGGCGTTGAGT
GTGTGCAGGATAATGGCGTTGATCGCGGAGCGGTTCTTCTTGGTAGGTGCGGCGGCGAACATCCCCATGACGCGCGAAAC
TAGCCAGGGCCGGGGGTGTCACGCCGTCAAGGACGGCGTCTTCATGATGGGGGCCATTCTCAGCATCGTCGCCACCGTGC
TCGGGATCGTATCTTACATCATGCTTTA------C---GCGGCGGCGGCTGGTGCTACTACTACC---------ATGGGG
GCCGTGGCGGGGCCGTCGTCGGCAGGCGAGATCAGGCTTGACGGGATCGCGATCGGCCACCCTGTTGCTGCTCAACAACA
CGCACAAGCTGTG----TAGAGGGCCTACTCTTGCTTCTACTCCCTCCGTCCGAAAATACTTGTCGAAAAAATAAATGAA
AATGGATGTATCTATAACTAAAATACGTCTAGATTCTCCGACAAGTATTTCCGGACGGAGGGAGTACCATCTAGACGGGT
GGTGAAGAATTGCAAGCCCAT-----------------------------------------------------------
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-GTTACATGGGGTGATGCCCCAAGTGATACCATTTTTT-CTGACCGTTATTTCAGTATGATTTTTAAACTTCGGCTGACT
GCATACAGTCAAAGGAAGACGACAGCCAACATGATTTTTGATGTAATATTAATTTTTGCTGGTCATTTTGTAGTTTGGTG
CCTTTCCATTGCATTGTTCACTGTCATCCT---TAATAATTTTCAATTATAAAAGGGATAAATGTGTTTTTCGTCCCTCA
ACTCTTTTGGAAGTGTAGCAATGGTCCCTCAACACCAAAACCAACAAAACTAGGGGCCACTTCTTAATAAGCTACCTCTC
CCCATCTTAAAAAATAAGTTGCTCCCTAAATTTGTTGAGACTTTTAAATTAGTTACCACATAATTAGTTCAGAAGCCCCA
ATGAACGAGGGATGCGGCTTATGGGGAAAGCTGGGGAGGAGGCGGCTTATTTTTTAAACCGTCAAAAGAACTGGCCCTAG
GTCTCTCAGCTTTTAAAACCAGATAAGTTTAGTCCCTCGGGCTGTTTCCCTCCGATGTGAACAGTAAACATATGAACAGT
AATTTGAAAACAAATAGCAACAAAAATCAAAAAATTCTGAAATTTTATGACATCGAAGATACTCAGGTGCGCAAGGTGTG
TGCAAAATTTAGTCGTGTTTGGACGTTCGAGGAGCTCGCGACAAAGAACCGAATGTGAATCTGCTCTATCATAAACAGTA
AATTAAAAAGTAGCAAACAAAATTAAAAAATGAAATCTGTTGAAATCCAAGATGCTTGGTTGAGCAATGTGCGTGCCAAT
TTTTGGGGTCAAATGATATCCAAGGCGCTCATGGAAAAATAAAC
>chr6D_1
CAGGCGAGGCCGCGAAGGATAGCGGCGCGATCCTCCGGAGAGCACTGGATCGGGGAAGCAGAGCACTTCGCAAAGTTCGT
GTGGAGGCCTGAGACAACGCCGTATACCCGAAGAAGCTCGCGGACCACGGCGAGGTCGTGCTCGTCCGGGTGGCAGAAGA
CGACGACAACATCAGCATAAATTGAAATGCTGGATGCCATGTGGCGCGGGGTAAGGCGGCGTAGGACGCCGTCGGTGACG
GCCCGCTGGAGGAGGCGATCCAGGACGTCGATGACCAGCACAAACAGCATGGGGGAAACAGGGTCGCCCTGACGGAGCCC
CTTGTGGTGCGCAATAGGGGGCCCGGCGCAGCCGTTGAGGAGGACCCGCGTGCTTGCCGTGTCGAGGAGGATGGAGATCC
ACTCCCTCCACCATGGGCCAAAACCCAGATGTCGCAGGATGTCGAGGAGGAAGGGCCAAGAGACTGAATCAAACGCGCGG
GCAATGTCCAGCTTGAGCATGACTCGGGACAGCTTGAGGTTATGGAGGCGGCGCGCCGTTTGTTGCACGAGGAGGAAGTT
ATCGTGGATGCATCTTCCGGAAATGAAGGCACTCTGGTTCGTCGAGATCATGTCGCCGAGG-------------------
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>chr2D_4
---GCGAGGCCGCGTAGGACGGCGGCGCGATCCAGCA---AGCACTGGATAGGAGAAGCAGAGCACTTCGCGATATTCGT
GTGGAGGCCTGAGGCGACGCCGTAGACCCGAAGAAGCTCGCGGACCACGGCGAGGTCGTGCTCGTCCGGATGGCAGAAGA
TGACAACAT-ATCAGCATAGAGGGAGATGCTAGATGCCATGTGACGCGGGGTAAGGCGG---AGGACGCCGTCGGCAACG
GCCCGCTAGAGCAGCCGGTCCAGGACGTCGATGACCAGCATGAAGAGCATGGGGGAAACAGGGTTGCCTTGGCGAAGCCC
CTTGCGGTGTGCAATAGGAGGCCCAGTGCAGCCGTTGAGAAGGACCCGTGTGCTTGCCGTGCCAAGGAGGATGGAGATCC
ACTCCCTCCAACGCAGGCCAAAGCCCAGATGGCGCAGAATGTCGAGGAGGAAGAGCCAAGAAACCGAGTTGAACGTGCGG
GCGATGTCGAACTTGAGCATGACACGAGACAACTTGAGATTGTGAAGCCGGCGCGCCGTTTGTTGCACGAGGAGGAAGTT
GTCGTGGATGCATCTGCCGATGATGAAAGCACTTTGGTTCATCGAGATCATCTCGCCAAGGC------------------
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>chr3D_4
---GCGAGGCCACGAAGGATGGCCGCGCGATCATCCGGTGAGCACTGGATCGGAGATGCCGAGCACTTCGCAAAGTTGGT
GTGGAGGCCCGAGGCAACTCCGTAGACCCGAAGAAGCTCACGCACCACGGTGAGGTCGTGCTCGTCCGGATGGCAGAAGA
TGACGACATCATCGGCATATAAGGAGATGCTAGATGCCATGTGCCGCGGGGTAAGGCGAC--------------------
----------GGAGCCGATCCAGGACGTCGATGACCAGCACGAAAAGCATGGGGGAAACAGGGTCACCTTGCCGAAGCCC
CTTGCGATGCGCAACAGGAGGCCCAGAGCAGCCGTTGAGGAGGACTCATGTGCTCGGCGTGCCTAGGAGGATGGAGATCC
ACTCCCTCCAGCGCGGGCCAAAACCCAAGTGGCGCAGAATGTCGAGGAGGAAGGGCCAAGAAACCGAGTCAAACGCGCGG
GAGATGTCGAGCTTGAGCATGACGCGAGCCAGCTTGAGGTTGTGGAGGCGGCGCGCCGTTTGTTGCACGAGGAGGAAATT
GTCGTGGATACATCTGCCGGTGATGAAAGCACTTTGGTTCGTCGAGATCATCTCGCCAAGGC------------------
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>chr1D_633
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--------------------------------------------------------------------------GGCTTC
CAAAACACTCGTAATCAGCGGGCAGCATCAATTTAACTTGGCAGATGCACACGTCCTGCGTTGCTAGATGTCTACGTAAT
CAGGCTTTGTCGTGAGATGATCCTTTTCGGATACGACTATGTACGATC--GTCAGCCTTAGCCTTGCGGTCATCGCCAGC
CGGTGCGAGACGATGCTTGCGGACAAGAGAGTA-G-TACGCGTGA--AGGCACCTTCGTGGAAAACCTAATA-GCC----
--TGGCCGACCTCATAAGCGTCCTCTATATAAGCATCAGAACATTTGATCATGGCTTTTATACCCATCCATCACCTCACG
CAGTCACTATCTCGGACGACGGACCAAAAAAGGAAGTCGTGAAGTTGTTAGAGAAATGAAGATTACCGTGATCGTCTTGT
CCGTCGTGGTAGCATTGTTTGGGGTCGCAAGTGCCGTCCTGGGGTTCATCGCCGAGGGCACCAAGCTCACGGTAAGCAT-
-------------------GTACACTGGTAGTGGCTCCGTCCATCTCAAGCAAACTGAACTGACCAGCGCGCTTGCGGTG
-CTCGTGGCGCGCAGCGGAATGACATTGAGGTG---TACAGCAACGAGTGCGTGTACCCTGACAACCCGGCATACGCGCT
GGGGTTACTGGCGGCCCTCCTGCTACTGTTGGCCCAGATCACCGTCTCGGCCGTCGGCGGTTGCTGCGGCCGCTGCATGC
CTCGGGGCGGCGGCTTCTCCAGGTCCAAGGCCGTTGCCAAGTCCAAGCGGGCCA------TTGGTGCCGCCCTCTGCGTC
CTTTCATGGCGAGCT-----------------------------------------------------------------
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>chr1B_633
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--------------------------------------------------------------------------GGCTTC
CAAAGCACTCGTAATCAGCGGCCAGCATCAATTTAACTTGGCAGATGCACACGTCCTGCGTTGCTAGATGTCTACGTAAT
CAGGCTT-GTCGTGAGTTGATCCTTTTCGGATACGACTATGTACGATCGCGTCAGCCTTAGCCTCGCGTTCCCCGCCAGC
CGGTGCCAGACGATGTTTGCGGACAAGAAGAGCGG-TACGCGTGA--AGGCACCTTCGTGGAAAACCTAATAAGCT----
--TGGCCGACCTGATCAGCGTCCTCTATATAAGCATCAGGACATTTGATCATGGCTTTTATACCCATCCATCACCTCACG
CAGTCACTATCTCGGAAGACGGACCAAAAAAGGAAGTAGT----TTGTTAGAGAAATGAAGATTACCGTGATCGTCTTGT
CTGTGGTGGTAGCATTGTTTGGGGTCGCAAGTGCCGTCCTGGGGTTCATCGCCGAGGGCACCAAGCTCACGGTACGTAT-
-------------------GTGCACTGGTAGTGGCTCCGTCCATCTCAAGCAAACTGAACTGACCCGCGCGCTTGCGATG
-CTCGTGGCGCGCAGCGGAATGACATTGAGGTG---TACAGCAACGAGTGCGTGTACCCTGACAACCCGGCGTACGCACT
GGGGTTAGTGGCGGCCCTCCTGCTGCTGGTGGCCCAGATCACCGCCTCGGCCGTCGGCGGTTGCTGCGGCCGCTGCATGC
CTCGGGGCGCCGGCTTCTCCGGGTCCAAGCCCGTTGCCAAGTCCAAGCGGGCCA------CCGGCGCCGCCCTCTGCGTC
CTCTCATGGTGAGCTAAGCTTCCGTGCTCAACTGCTCATAGCCCATCCATTCCTGAC-----------------------
--ATGCATGTCGAGGGTTCGATCGA-----------GGTGACGGCCAATCCAATGGGCGATGAACATGCTGCCGTTGAGT
GTGTGCAGGATAATGGCGTTGATCGCGGAGCGGTTCTTCTTGCTAGGTGCGGCGAGGAACATCCCCATGACGCGCGAAAC
TAGCCAGGGCCGGGGCTGTCACCCCGTCAAGGACGGCGTCTTCATGATGGGGGCCGTTCTTAGCATCGTCGCCACCGTGC
TCGGGATCATATCTTACATCATGCTTTA------C---GCGGCGGCGGCAGGTGCTAATACTACTACTAGTACAATGAGG
GCCGTGGCGGGCCCGTCGCCGGCAGGCGAGATCAACCATGACGGGATCGCGATCGGCCACCCTGTTGCCGCTCAACAACA
CGCACAAGCTGTG----TAGAGGGCGTACTCTTGCTTCTAC---------------------------------------
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>chr1A_709
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----------------------------------------------------------------------TCTACGTAAC
CAGGCTT-GTCATGAGATGTTGTTTTTCGGATACGACTATGTACGATC--GTCAGCCTTAACCTCGCAGTTCTCGCCAGC
CGGTTCGAGACGCTGTTTGCGGACAAAATGAAACAATACGCGTGAAGAGGCACCTTCGTGGAAAAC-TAATA-GCCTGAC
CGTGACCGACCTGACCAGCGTCCTCTATATAAGCATCAGAACATTTGATCATGGCTTTCATACCCATCCAACACCTCACG
CAGTCACTATCTCGGACGACGGACCAAAAAAGGAAGTCGTGAGGTTGTTAGAGAAATGAAGATTACCGTGATCGTCTTGT
GTGTCGTGGTAGCGTTGTTTGGGGTCGCAAGTGCCGTCCTGGGGTCCATCGCCGAGGGCACCAAGCTCACGGTAAGTAT-
-------------------GTAGAATGGTAGTGGCTCCGTCCATCTCAAGCAAACTGAACTGATCCGCGCGCTTGCGATG
CTTCGTGGCGCGCAGCGGAATGACATTGAGGTG---TACAGCAACGAGTGCGTGTACCCTGACAACCCGGCATACGCACT
GGCGCTGCTGGCGGCCCTCCTGCTGCTGTTGGCCCAGATCACCGCCTCGACCGTCGGCGGTTGCTGCGGCCGCTGCAAGC
CCCGGGGCGCCGGCTTCTCCGGGTCCAAGCCCGTTGCCAAGTCCAAGCGGGCCA------CTGGCGCCGCCCTCTGCGTC
CTCTCATGGTGAGCT----------TCCG---TTCTCATAAG--------------------------------------
--AGGCATGTCGAGGATTCGATCGA-----------GCTGACGCCAATTCAAC--GGCGATGGATATGTTGCGAAT---T
GTGTGCAGGATAATGGCGTTGATCGCGGAGCGGTTCTTCTTGGTAGGTGCGGCGATGAACATCCCCATGACGCGCGAAAC
TAGCCAGGGCCGGGGGTGTCACGCCGTCAATGACGGCGTCTTCATGATGGGGGCTATTCTGAGCATCGTCGCCACCGTGT
TCGGGATCATATCTTATATCATGCTTTA------C---GCGGCGGCGGCTGGTGCTAATACTACC---------ATGGGG
GCCGTGGCGGGGCCGTCGTCGGCAGGCGAGATCAGGCTTGACGGGATCGCGATCGGCCACCCTGTTGCCGCTCAACAACA
CGCGCAAGCTGTG----TAGAGGGCGTACTCTTGCTTCTAC---------------------------------------
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>chr1D_995
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-------------------------------------------------AGAGAAATGAAGACGGGCGTGATCGTCTTGT
CCGTCGTGGTAGCGGTTTTTGGGGTAGCAAGCGCTGTGCTGGGGTTCATCGCCGAGGGCACCAAGCTCACGGTAAGTACA
CTAGC--------AGTCTGGTAATCTAGTAGTCGTAGGATCCATCTGAAGAAAACTAAAACGGACCG-------GCGACG
-CTTGTGGCGCGCAGCCGAATGACATCAAGATA---TCCAGGAACGAGTGCGTCTACCCTGACAACCCGGCATACGCACT
GGGGCTAGTGGCGGCCCTCCTGCTGCTGGTGGCCCAGATCACCGCCTCCGCCGTCGGCGGCTGCTGCGGCTGCTGCAAGC
CTCGGGGCGCCGGCTTCTCCGGGTCCAAGAGCT---CCAGGTCCAAGAAGATCATTGGCGTTGGCGCCCTCCTCTGCCTC
GTCTCATGGTGAGCT----------TCCG---TGCTCATAGTCCATGCATGAT---------------------------
--------------------------------AGGTGACGACGATCAAATCAACGGGCGAT--ATATGTTGTGTAT--GC
GTGTGCAGGATAGCGGCGTTGATCGCGGAGTGGTTCTTCTTGCAAGGTGCGTTCGGGAATGCCCCCATGACGCGCAGAAC
TACACAGGGCCGGGGATGTACCTACCTCAAGGACGGCGTCTTCAGGATGGGGGCCATTCTGAGCATCGTCGCCACCGTGC
TCGGGATCATATCTTACATCGTGCTTTACGTGGCC---GCGGCGGCGGCGGGTGCTGGTACTACCGC---TACCCTGGGG
ACCGTGGCGGGACCGTCGGCGGCGGGCGAGACCAAGCACGACGGCATCGCGATCGGCCAGCCTGCTGCCGCTCCACAACA
CTCAGAAGCTGTG----T--AGGGCGTCCTCTTGCTTCTAC---------------------------------------
-------------------------------------------------------------------CTCTCCGTCC---
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>chr1B_995
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-------------------------------------------------AGAGAAATGAAAACTGGCGTGATCGTCTTGT
CCGTCGTGGTAGCGGTTTTTGGGGTGGCAAGCGCTGTGCTGGGGTTCATCGCCGAGGGCACCAAGCTCACGGTAACTACA
CTAGTTAACTAGTAGTCTGGTAATCTAGTATTGGT---ATCCATCTGAAGAAAACTAAAACGAACCG-------GCGGTG
-TTTGTGGCGCGCAGCCGAATGACATCAAGATAATATCCAGGAACGAGTGCGTGTACCCTGACAACCCGGCATACACACT
GGGGTTAGTAGCGGCCCTCCTGCTGCTGGTGGCCCAGATCACCGCCTCCGCCGTCGGCGGCTGCTGCGGCTGTTGCAAGC
CTCGGGGCGCCGGCTACTCCGGGTCCAAGAGCT---CCAGGTCCAAGAGGGTCATTGGCCTTGGCGCCGTCCTCTGCCTC
GTCTCATGGTGAGCT----------TCCG---TGCTCATAGTCCATGCATGAT---------------------------
--------------------------------AGGTGACGACGATCAAATCAACGGGCGAT--ATATGTTGTGTAT--GT
GTGTGCAGGATAGCGGCGTTGATCGCGGAGTGGTTCTTCTTGCAAGGTGCGTTCGGGAATGCCCCCATGACGCGCAGAAT
TCCACAGGGCCAGGGATGTACCTACCTCAAGGACGGCGTCTTCAGGATGGGGGCCATTCTGAGCATCCTCGCCACCGTGC
TCGGGATCATATCTTACATCGTGCTTTACGTGGCGATGGCGGCGGCGTCGGGTGCTGGTACTACCGC---TACCCTGGGG
GCCGTGGCGGGGCCGTCGGCGGCGGGCGAGACCAAGCACGACGGGATCGCGATCGGCCAGCCTGCTGCCGCTCAACAACC
CTCACAAGCTGTG----TAGAGGGCGTACTCTTGCTTCTAC---------------------------------------
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>chr1A_1165
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-------------------------------------------------------------------------------G
-CTTGTGGCGCGCAGCCGAATGACATCAAGATA---TCCAGAAACGAGTGCGTGTACCCTGACAACCCGGCATACGCACT
GGGGCTAGTGGCGGCCCTCCTGCTGCTGGTGGTCCAGATCACCGCCTCCGCCGTCGGCGGCTGCTGCGGCTGCTGCAAGC
CTCGGGGCGCCGGCTTCTCCGGGTCCAAGCGTT---CCAGGTCCAAGAGGGTCATTGGCCTTGGCGCCCTCCTCTGCCTC
GTCTCATGGTGAGCT----------TCCG---TGCTCATAGTCCATACATGATGCATGTGTGGCACAGTGGAAGCCACTG
GTAGGCATGTCGAGGGTTCGTTCGATCGATGGAGGTGACGACGATCAAATCAACGGGTGATGAATATGTTGTGTAT--GT
GTGTGCAGGATAGCAGCGTTGATCGCGGAGTGGTTCTTCTTGCAAGGTGCGTTCGGGAATGCCCCCATGACCCGCAGAAC
TCCACAGGGCCAGGGATGTACCTACCTCAAGGACGGCGTCTTCAGGATGGGCGCCATTCTGAGCATCCTCGCCACCGTGC
TCGGGATCATATCTTACATCGTGCTTTACGTGGCGATGGCGGCGGCGGCGGGTGCTGGTACTACCGC---TACCCTGGGC
GCCGTGGCGGGGCCGTCGTCGGCGGGCGAGACCAAGCACGACGGCATCGCGATCGGCCAGCCTGCTGTCGCTCAACAGCA
GTCGCAAGCGGTG----TAGAAGGCGTACTCTTGCTTCTAC---------------------------------------
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>chr1D_1421
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-------------------------TCCG---TACTCATAGTGCATGCATTTCTGAC-----------------------
--AGGCATGTCGAGGGTTCGCTCAA-----------GGTGACGGCCAATCCAACGGGCGATGAACATGCTGGCGTTGAGT
GTGTGCAGGATAACGGCGTTGATCGCGGAGCGGTTCTTCTTGGTAGGCGCGGCGGCGAACATCCCCATGACGCGCCAAAC
TAGCCAGGGTCGGGGGTGTCACTCCATCAAGGACGGCGTCTTCATGATGGGGGCCATTCTGAGCATCGTCGCCACCGTGC
TGGGGATCATATCTTACATCATGCTTTA------C---GCGGCGGCGGCTGGTGCTACTACTACC---------ATGGGG
GCCGTGGCGGGGCCGTCGTTGGCAGGCGAGATCAGACTTGACGAGATCGCGATCGGCCACCCTGTTGCCGCACAACAACA
CGGACAAGCTGTGTAGCTAGAGGGCGTACTCTTGCTTCTAC---------------------------------------
-------------------------------------------------------------------CATCTAGACGGGT
GATGAAGAATTGCAAGCCTCCTTCCCGGGAGAAATCCCTTGTCTTGCTTAGACTGGACGGCAACGGCGCGGTGCGTCGCC
TCCTTCTTGAAGGTGCCGTCTTGGGCAAGGTGGGAGCGTGCAGTGGGGCATCGTGGTGGCTGCGTCTTTGGCGAGGGAGA
TGGAACGTGGTGCTTTGTTTCTGAATTAGTGCAGCTCGACATTCCTTGATTTGTTCAGTTGCAGGTCAGCTTCTGCTTGA
CTGGCGTCATTGCCTTGGGCAGGGAGGGGATAGGGGTCCTCACTAGCAACTGCGCGACGCAATGACACGAACATGGCTGA
TTTCTGTGGGCTTGAGCTAATTCCAATTGTGGTGCTCCATCTCTTTTCGCTGTATGTTTGTTCAGTGACAGCTCCTTTGT
GCAGTTTTTCCTCTTCGTGCTTGTATCAGTGAGCCTCGGTGTGGATATCCTCGGTTTCCTTCGTGCAGCGACAGGTCGGG
CTGAGTATCCCCCTTGGTGGCCGGAACCGTGTCCGTTCTTTGCTCTAGGGTGAGCAATTCTATCTTCCAGCGGTCCGGCG
CCTTTCGAGCCAAGGCGAGCGGCAGGGGTCCCCTCCGGATTTGGAGAACTGCGACATGTTTTCGGTGTCCACCGTCCTGG
GTTGATGACGGCGCGGTCCTTTGTCGTTGGGCACTGGTGCCGTTTGATGTTCCTCTCTGTTCGCTCTTCTGGGTCAAGTG
CACTTGGAGGACTCCGTCGACTACAAGCTAGAGCTTATTTAGGATTTTGTGTAGGGCTTGTAGTCTTTGGTGCTTGTAAG
CTGCTGGGCAACACTCTGTATCCGCTGTAGCTTTTCCTTTCTGTTCCGTGTTGGTTGTATTGGTGGCCTTGTGTAATCCC
TGGCCCGTTGATGGCTTCGTTAATTCAAAGCCGGGCTCCTCTGGAGCCTTCGTTCCAAAAAAAAAAGAATTGCAAGCCGA
CGTTACATGGGGTGATGCCCCAAGTGATACCATTTTTTTCTTACCACTATTTCAGTGTGATTTTTAAACTTCGGCTGACT
GCATACAGTCAAAGGAAGAAGACGGTCAACACTATTTTTTATGTAATTTTAATTTTTCCTAATCGTCTTGTAGTTTGGTG
TCATTCCATTACATTGTTCACTGTTATCCTTGATAATATTTTTCAACTATAAA---------------------------
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>SNPs
--S-----------S-----------------S------------S--------------SS------S-----------
---------------------S----------------------------------------------------------
---S--SS-----------------------------------------------------S--S-S-------------
-------S--------S-----S------S--------S-----------------------------------------
------------------------------------------------S---------S--------------S------
-------S-----------------------S----S-------------------------------------------
--------S----S----S---------------------------------S--S---------------S--------
-S----------SS------------------------------------------------SSSSSSSSSSSS------
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---------------S----SSSS--------------------------------------------------------
---------------------S----------------------------------------------------------
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------------------------------------------------------------S-------------------
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------S-----------
-------------------------S---------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------
-S----------------SSS-----------------------------------------------------------
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-----------------------------------------S---SS---------S-----------------------
-------------------S---S-S-----SS------S-------S---------S--SS--S-S-------------
S-S-------S-------------S-------------S-------S------SSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_69
-------------------------------------------------TCGGAGAAGCATCGCACTTT-----------
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--------------------------------------------
>reverse_2044
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-------------------------------------------AGTATTTCCGGACGGAGGGA-----------------
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--------------------------------------------
