>input_sequence_67529
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---------------------------------------------------------ATGACTGAACCGGTGAAGCTCAT
CGGCGCCTTCGGCAGCCCGTTCGTCCACCGTGCGGAGGTGGCCCTGCGCCTCAAGGGAGTCGCCTACGAGCTCATCACGG
AAGACCTGTTCAACAAGAGCGAGCTGCTGCTCCGCCACAACCCCGTCCATCACAGGGTGCCCGTGCTCCTCCACGGCGAC
AAGGCCATCTGCGAGTCGCTGGTCATCCTCGAGTACATCGACGAGGCCTTTGATGGCCAGCCGCTCCTGCCAACCGACCC
CGGCGAGAGGGCCGAGGCCCGCTTCTGGGCCAAGTTCTTTGCGGAAAAGGT----TACCATGCATGCCTGAATATTACTC
CTATTTTTTACAATTCAAATTTGTTGTCGCAAAAAGTAGGATTGGCAAACAATTTCGAAATACATACTCAATTCTCATTA
TGC--C--GTGTGCGTGAATTGTTTGGTC---------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------AGTGCCTGATGTCGGTGTGGCTGGCGCTGTGGACG
GAGG---GCGAGACACAGAAGGTTCTCATGAAGGATGCTAAGGAACATCTGGCGATAGTGGAGACACAGCTCAAGGAGAA
GAGATTCTTCGGAGGCGTTGCCATCGGCCTCGCCGACATCGCCGGCGCCAGCGTGCTGTCCCACTGGGCTGGCGTGCTGC
AAGAGGTCGCTGGGATAACCATCATGAGCGATGACGAGTATCCTGCTATTCGCCGGTGGATGGAGGACTACAACGCCGAC
GAAGTTGTCACGGAGTGCCTGCCGGATCGGGACCAGCTTGTGTCCCACTTCACCTCTATCAGAGGGAAGTGCGTCGCCGC
GGCCAAGTCCATGCTACCCAATTATCTAGCCACCAAATAG----------------------------------------
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>chr3D_1_TraesCS3D01G483000
TCCTGCTCCGCCTTGTCCCCTACTGTCTCGTCTTGCTCCGGAGTGTCTGGAGGCAAGCCGCTGGCGATGCGAGCAGCACG
CCGTGCCTCGATCTCCACTAGGATCTCTGACCGGCGCTGCGGAGTGAGCATTTTGTAGGCTGTGATCTGCTGGCGGACCA
TGGTTGCCTGTGGATGATGATCTCGGAGCGGACTG-AATGGATTGGAGTGATGGTGAGTTCGGAGCTTGGGAGTGGCGGC
ACGGACGGGAGGGAAAGGTTGGAAATAGGATGAATAGGGTTGATGCTTGTTTTTCGGCTTAAAATAGCTAGATTTGGCCC
CTCGGGCTGTCCGCTAGAGCGACGGCATGAATGCATCCTCGCCGGATCGATGAGTTTTGGCATGTGTCCGCATGGGTCGT
CCCT----GTCTGATGTGGCGGACCCATCTGGGCGCGACCGGACCTTCTCATATCCGCTTCAAATATGAACTGAATATAT
GCGATGCCGATGAGCCCAAATCGTATAGGATCAATTTGAGGAGTCGGACACTCGGACTAGATCATGATTTTGTTCGGTTA
TTAACTGGGACGTCCGTTCGGATGAGCATTGAGGAGCCCATGCTCTAAGGATGCAGCGCACTGGAGTTTTGATGGGCCGA
GGCCT---CGTCGTCTGCGGCCGAGAAATCCCGCGCTTCCAGGTGCGGGGGGAGACGAGGCGAATTCGAAATTTGGCCGT
GCCGTTCGGCCGTTGCTGGTCATCATCACCATCGTCTCATATTCAGAGATGCTCTTGACCAAAATGCTTTCACACAGTGA
GAGATTGGAAAAAAGAAAAAAGTCTCGTGCCACCGCGGCGACGTGTGCTAGAAAACTAGTGTAGAAACGAAGCAACCAGC
AGTCTTCTT-CTATCCCAAAAGACAATTGCAAAATGACTTCCACTTTGACGAGCTGAGAGGAATTCCTACCACCT-----
-ATTTATACACGTACCAAC--CATACGCATCTTCCAGATCACGAAGAAGGAAGCAAGATGACTGAACCGGTGAAGCTCAT
CGGCGCCTTCGGCAGCCCGTTCGTCCACCGTGCGGAGGTGGCCCTGCGCCTCAAGGGAGTCGCCTACGAGCTCATCACGG
AAGACCTGTTCAACAAGAGCGAGCTGCTGCTCCGCCACAACCCCGTCCATCACAGGGTGCCCGTGCTCCTCCACGGCGAC
AAGGCCATCTGCGAGTCGCTGGTCATCCTCGAGTACATCGACGAGGCCTTTGATGGCCAGCCGCTCCTGCCAACCGACCC
CGGCGAGAGGGCCGAGGCCCGCTTCTGGGCCAAGTTCTTTGCGGAAAAGGT----TACCATGCATGCCTGAATATTACTC
CTATTTTTTACAATTCAAATTTGTTGTCGCAAAAAGTAGGATTGGCAAACAATTTCGAAATACATACTCAATTCTCATTA
TGC--C--GTGTGCGTGAATTGTTTGGTC---------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------AGTGCCTGATGTCGGTGTGGCTGGCGCTGTGGACG
GAGG---GCGAGACACAGAAGGTTCTCATGAAGGATGCTAAGGAACATCTGGCGATAGTGGAGACACAGCTCAAGGAGAA
GAGATTCTTCGGAGGCGTTGCCATCGGCCTCGCCGACATCGCCGGCGCCAGCGTGCTGTCCCACTGGGCTGGCGTGCTGC
AAGAGGTCGCTGGGATAACCATCATGAGCGATGACGAGTATCCTGCTATTCGCCGGTGGATGGAGGACTACAACGCCGAC
GAAGTTGTCACGGAGTGCCTGCCGGATCGGGACCAGCTTGTGTCCCACTTCACCTCTATCAGAGGGAAGTGCGTCGCCGC
GGCCAAGTCCATGCTACCCAATTATCTAGCCACCAAATAGACCTAAGCGGCTAAGCTTGTGGTTAGTGTGATGCCTGTGG
GTTG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----AATTA-CACGAAGATCTGTCGTAAAATAAGACATAGGGGCAGTTGATGGAATGTTATTGTTCAATGCCACTGTGCT
CGGTTTGCT--TAGTTTGCCTATGCAGGAATAAGATATATATGCTCTCGGGAAGTACATGTTTGGTTGATAACTGAAACT
AGTCCTGGCCATGGGAAGCCCGGCCCGGCCCGAAAAAGCCTGACCCGGCCCGACGCTGCTCCTGGGCCGGGCTCGGGCCT
AGATTTTGATCCTGATGGCCGAGCCGGGCCAGGCCCGGGCCCATCGTTTTTGCGCTTTTCTGAAAAGGCCCGGCAGGCTT
TTACGCGTTCGGCCGAGCTTGGGCCCAAAAACTAGGCCCGATAGCCGGGTCGGGCCGGGCCCGGGCCTAGGTTTTTTGCC
TCGGGCTTGGCTAGCCCCGGCCCGGCCCGAGGTTTGGCCAGGTATAACTGAAACATCCATGAGTTCTTTTGGTCATAAAT
AACACTTGTTTCTATGCTTGCCGAAATTTTTGGAGGTTCCCCTGCTGTTCTGAGGTTAAAAAAAAAGGAAGTAGCGACCG
GGGCTATGCGTTGGGTACAAA------------------TAAGCATCAATTTGTTTTTGAAGCTCTTATATGCATCAAAT
AGGACATTCCGTGGACACACAGTGAGTTTATTTTTTGCGGACTGACATATAGTGAGTTTCTTAGAGGCTGTTATGGGTAT
GCCCAATGGGCTTTTCTCTTGGCCCACCGAACATTTATTCTCCGGCTCTGTCATCTCTGGCCATAA----------GGCA
TGTCACCTCCACACATGCACCTGGGGCTGGGGGCCCATCTGCAGCTAGTTTGGTTCATGTGCACACCTTTGTGCATTGAA
AGATTCGGTGCCTATTGTAAGCCTGAGATGGTTGTGTTTTTGGAGCTGCCTGCTACCTCGTAGGCTGACTATCATACAAG
AGTCAGCTCTGTAGCAGACCAGAAGAACACT-------------------------------------------------
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-------------------------
>chr3D_103
ATCCTA--------------------------------------------------------------------------
-----------------------------ACCGGCACTGCGGAGTGAGCATCTTGTAGGTGGTGATCTGCTGGCGGACCA
TGGTTGCTAGCGGATGATGATCTCAGAGCAGATTGAAATGGATTGGAGTGATGGTG------GAGCTTGGGAGTGGCGGT
GCAGACAGGATGGAGAGGGTGAAAATAGGATGAGTAGGGTTGAGGCTCGTTGTCTGGCTT-AAATAGCCTGATTTGGTCC
CTCGGGCTGCGCACCGGAGCGACGGCGTGAATGCGTCCTCACCGGATCGATGAGTTTTAGCGTGTGTCCGCGTGGGTCCT
TTCAGTCAGTCTGAATTGGCGGACCCGTCCGGGCGAGACCGGACATCCTCATATCCGCCTCAGATATGAACTGAACATGG
GGGCGCTGGTGAG--CCCAAACGTATAGAACTGGTTTGAGGAGTCGGACTACAAGGTCATGATTTAGTGATCAGTCACTA
ACTGGGCTGCCCATTCG------GAGCATCGAGGAGCCCATGCTCTAAGGATGCAGTGCACTAGCGTTTTGATGGGTCGT
GGCCT---CGTCGTCTGCGGTCGAGAAAGCCCGCGCTTCCAGGTGCGGAGGGAGACGAGGCGAATTCGAAATTTGGGCGT
CCCGTTCTGCCGTTGTTGGTCATCATCAACATCGTCTCATGTTCGGAGATGCTCTTGACCAAAATGCTTTCACACGGTAA
GAGATTGAGAAAAAGAAAAA------------------------------------------------------------
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>chr3A_531
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------------------------------------------------------------------------------TA
ACTGGGCTGTCCATTCG------GAGCATCGAGGAGCCCATGCTCTAA-GATGCGGTGCACTAGCGTTTTGATGGGCCGT
GGCCT---CGTCGTCTGCAGCCGAGAAAGCCCGTGCTGCGAGGTGCGGAGGGAGACGAGGCGAATTCGAAATTTGGCCG-
CCCGTTCTGCCGTTGCTGGTCATCATCAACATCGTCTCATGTTCGGAGATGCTCTTGACCAAAATGCTTTCGCACGGAAA
GAGACTACG--AAAAAGAAAAGTCTCGTGCCACCGCGGCGACATGTGCTAG-AAACTACTGTAGAAACGAAGCAACCAGC
AGTCTTCTTATG-TCTCAAAAGACAAAGGCAAAATGACTTCCACTTTGACGACTCT-GAGGAATTCCTAGCACCTTATAT
TATATATATACGTACCAACACCATACGCATC-TCCAGATCACATAGAAGGAAGGAAGATGACTGAACCGGTGAAGCTCAT
CGGCGCCTTCGGCAGCCCGTTCGTCCACCGTGCGGAGGTGGCCCTGCGCCTCAAGGGAGTCGCTTACCAGCTCATCACAG
AAGACCTCTCCAACAAGAGCGAGCTGCTGCTCAGCCACAACCCCGTCCACCACAGGGTGCCGGTGCTCCTCCACGGCGAC
AAGGCCATCTGCGAGTCGCTGGTCATCCTCGAGTACATCTACCAGGCCATTGGCGGCCCGCCGCTCCTGCCAACCGACCC
CGGCGAGAGG-CCAAGGCCCGCTTCTGGGCCAAGTTCTTTGCCGAAAAGGT----TACCATGCATGCCGGAATATTA---
---TTTTTTAGAACTCAAATTCATCTTTGCAAAATGTAGGATTCGCCAACAAATTCCAAATAT-------AATCTCATTA
TGC--CATGTGTGCGTGAATTATTTGATCAGTGCCATAGTTTTAAATAGCCGGCTACTATAGCTCTGCTATAGCCCGCTA
TATAGCCTTTTCAGCAGGGTGCCGCTAAATGGCCGCCTTCACAAATAGCCAGCTATAGCTTCGCTCCGCTATAGCTAATT
TGAAGGCCCGTCGCTATTTTTCTTAGGCTGCTATTTAAAACATTTAGTGCCTGATGTTGGTGTGGCTGGCACTGTGGACG
GCGG---GCAAGACACGGAAGGTTCTCATGGAGGATGCTAAGGAACACTTGGCGATAGTGGAGACGCAGCTCAAGCAGAA
GAGATTCTTCGGAGGCGCTGCCATCGGCCTCGTCGACATTGCCGGCGCCAGCGTGCTGTCCCACTGGGCAGGCGTGCTGC
AAGAGGTCGCAGGGATAACTGTCATGAGGGATGACGA--------------------GGATGGAGGACTACAACGCCGAC
GAAGTTGTCACTAAGTGCCTGCTAGATAGGGACCAGGTTGTGACCCACTTCATCGTTATCAGAGGGAAGTGCGTCGCCGC
GGCCTAGTCCATGCTACCCAATTATCTAGCGAGCAAATAGAC-TAAGCTAGAGGTTCG-----------------TGTCG
TTTG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----AATTAAGATGAAGATCTGTCGTAAAATAAGACATAGGGGCAGTTGGTGGAATGTTATTGTTCGATGCCACTGTGCT
CGGTTTGCC--TATGCAGGAAGCGGCCTCTAGG-----------------------------------------------
--------------------------------------------------------------------------------
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----------------------------GG------ATCTGTAGCCAGTTTGGTTCACGCGCACACCTCTGTGCAATGAA
AATTTTGGTGCCTATTGTAAGCCTGAGACGGTTGTGATTTTCGAGTTGGCTGATGCCTCGTAGTCTGACTATCAGACCCA
GGTCGGCTCTGTAGCAAACCAGGAGGACACTAATCCTATACGGCTCGTCGGTTGGTTCTCGCGCGATCTCTGGGCGAATA
TTGCTGAATTGACCAGTTGATCTCTCTTCTCTTGAGGAACCAGAGCCGAGAAAACTCAGAGATCCATGGTTCTACAAAAT
TCAGAGTGACTGAACTATATATAGTCCGGTTGCTAACGTCAACATGTGTAGCTAGTTCTAATGCATCTGGCAGATGGTTG
GTTGCCGTCGCTATTTGATGTTTGGTTGACATGTATGTCTATCCAAATGAATACAGTCATTCACTACCATGCCTTTGGGT
AGCTAGCTTCGTGCCAACTTTGATCAATTTCCATATTGAATAGACAATATGTACAAGTTTTGACCATTACCGTAACTACT
GTCCATTTATCTCTCAAATAGATAGATTGCTGAATGCCACCAAGTTTTCGAAACCATTTATACACATGCCGTATCGAAGT
ACTATATATTTGGTGATACTCACTCGTCTCTTTCCTTTTTGTAGCGTATACATAGTTATGTTGTTCAAAAAGTGTACCTA
TGCACAAGATATAGCATAACCTATATCCATGGTATAAAAGTTTAGAAGCTCAACCGTGCGACGTGCATTGTGGGCTGCAC
AAAATGTACTCTCTGTACCTGTATGAATAGATGGTGGTGGAACAGTACAAGTGCCCAAGCAAGTTAATGAAGTTACCGAC
AAACTAATTAGTGAAACTTCCGAGCATATCCGTTCTAATTTCTTTTACTATCTGCGTAACAGATGAAAACAAGAATTTGA
AGTTACTATATTTCATTGAATTCCCACAAATATGCTCGTGTCGGGATTGAGAATCAGCTGAATTTGCTTACCCTTGTATT
CTAATGTACTTCTTGAAATCTCTACATTTTTATAGTCTTAGTTTGAAGTTATCTTGTACTCCCTCCTCCAACCGGAATTA
CTTGTCGGAGAAATGGATATATCTAGACGGATTTTAATTGTAGATACATCCATTTTTATACATTTCGGCGATAAATAATT
CCGAACGGAGGGAGTATGAGAGAACCAATCGTAGTAGACTGTTCCCAGGATATGGACGCGTAGGTAATTGTATGTTCTGG
TAAGGCAAAACAGCTAAGCTAGTAAACATGTCCGTGTCATGCGTACAAGTGCGTTCATTAATCCATCAACATAGGGTCCG
TCTTCATTCCGTGTTTAGTTAGCTCCAGGTTAGTTCAAGCTGGACCTACACATGGTTTTCACTAGCACTAGTAGTTCATC
TCATCCAAGCTTGTTCTAGAGTACGTCTTCGCATAGAAGCCCAAAATTTTGTCATCATAATCATAAATATATCATACCAC
GGTAGAACTCAAGTCTTGTCTTGGACATCGACATTGGTCACGAACATACATTTCATGGTTACTTTTTATATGTACAATAA
ATTTCATCTTACAAATATGCCTTTTAATATTTCAACAGTTAAAGTGGTAAAATTTAGCAAATAATATATATTATTTAATA
TTTGAAAGTTGAAACTCGGGCTTTATTCATCATTGTGACTGCCGCTCTGGACATAAAGCGATGCACAAAAGGTCCTCATC
CAGTATGCGAAAGTGAACTCGACACTAGTGCAGACACATCTCATAAAGAAGTACTTCAGAGGCGCCACGTTTACCCTCGC
TGGTGTCAGCCTACTATCTTGCATGACGAGCATGATGCAAGAGGTCGCTGGGGCGAGCGTGATTTCAGACTATGAGTATC
CTTCTACCACCAGTGGACCGAGGAATACAACGTTGATGAAGCTGTCAAGGAGTGTCTGCTGAACAGGGTCCATCTCATCC
CCTACTTCACCATCATCAGGGCAAAGTGCTTCTCTGCGGCCTAGTCCATGTCACTCAGTTATCTAGGCAACAAATAATCC
AAGCTAGCAGTTTGTGTGATGTTTGTGGCATGAAATCAACACGAAGATCGCTTACAAATAAGAGACCTAGGCAGTTGGTG
GCCAGTCATTGTTCCATTTGAGTGCGCTTGGTTGCTCTTAGTTATTGCTTAATTACCTTCCGCCTTATATCCGCCTTAGA
TATGGATTGGTGCTAGTGAGTCCGAACGTATAGGGTAGGTTTGAGGAGTCAACTAGGTCATGATTTATGATGGGTCGCTA
ACTGGGCCGTCCATTCGGATAGATAGAGAGCGTTGAGGAGCCCATGCTTAAGGATGCAGCGCACTAGAGTTTTGATGGGC
CGAGGCCTCGTCGTCTCCCTCCGCGCATATATAAGGCGACGAGGTAGAGGAATCAATCAAGGGAGTCAAATTCGAAATTT
GGCCGTCCCATTCCGCCGTTGCAGGTCATCATCACCATCGGCTCATATTCGGAGACGCTCTTGACCAAAATGCTTTCACA
CTGAGAGAGATTGCGAAAAAGAAAA
>chr3A_609
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-----------------------------------------------------CAGCCCACTAGCGTTTTGACGGGCCAA
GGCCT---CGTCGTGTGCGGCCGAGAAAGCCCCCGCTGCCAGGTGCGTAGGGAGACGGGTCAAATTTGAAATTTGGGCGT
CCCGTTCTGCCGTTGCTGGTGTTCATCACCATTGTCTCATATTCCGAGATGCTCTTGACCAAAATGATTTTACACGGTGA
GAGAGATCG-----------AGTCTCGTGCCACCGCGGCAACGTGTGC-------------TAGAAACGAAACAACCAGC
AGTCTTCTT-CTATCCCAAAAGACAAAGGCAAAATGACTTCCACTTTGACGAGCTGAGAGGAATTCCTAGCAC-------
TATATATACACGTACCAAC--CATACCTATCTTCCAGATCACGAACAAGGAAGCAAAATGACGGAACCGGTGAAGCTCAT
CGGCGCCTTCGGCAGTCCGTTCGTCCACCGTGCCAAGGTCGCCCTGCACCTCAAGGGAGTCGCCTACGAGCTCATTACGG
AAGACCTCTCCAACAAGAGCGAGCTGCTGCTCCGCCACAACCCCGTCCACCACAGGGTGCCCGTGCTCCTCCACGGCGAC
AAGCCCATCTGCGAGTCGCTGGTCATCGTTGAGTACATCGACGAGGCCTTTGATGGCCCGCCGCTCCTGTCAGCAGACCC
CGGCGAGAGGGCCGAGGCCCGCTTCTGGGCCAAGTTCTTTGCGGAAAAGGTAGGTTATCATGCATGCCTGGAAACTA---
---TTTTTTACAACTCAAATTCGCTGTTCCAAAAAGGTTACATAGTG----------AAATAT-------ATTCTCATTA
TGT--T--GTGTGCGTGACTTGTTTGATC---------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------AGTGCCTGATGTCGGTGTGGCTGGCGCTGTGGACG
GAGG---GCGAGACACGGAAGCTTCTCATGGAAGATGCTAAGGAACACTTGATGATAGTGGAGACGCAACTCAAGGAGAA
GAGATTCTTCGGTGGCGCTGCTATCGGCCTCGCCGACATCGCCGGCGCCAGCGTTCTGTCCCACTGGGCGGGCGTGCTGC
AAGAGGTTGCTGGGATAACCGTCATGAGTGATGACGAGTATCCTGCTATCCACCGGTGGATGGAGGACTACAACGCCGAC
GAAGTTGTCATGGAGTGCCTGCCAGATCGGGAGCAGCTTGTGTCCCACTTCACTGCTATCAGAGGAAAGTGCATCGCCGC
GGGGAAGTCCATGCTACCCAATTATGTAGCCAGCAAATAGACCTAAGCTAGTGGTCCG-----------------TGTGA
TGCCTCCGGCTTGAGGCCCTATTTGGTTCCAAATAAGTCACCTGATTTATAAGTCAAGTGATTTTAAAATCAATAACTTA
TAAGTCATAACTGTTTGGTTGTCACCTGACTTATAAGTCACCTAACCACATCTTCTCATCTTGTTTTTTTATATAAAGGT
GGTGGGACCCATGCAAAAGGGATGACTTATAAATGTTAAGTTGGGATGAAGCAACTTATGACTTATGGTCTGTTTGGTTC
CAATAAGTCACCTGACTTATAAGTCAGGTGACTTAGAATCAATGACTTATAAGTCACGCCTGTACGGTTGTCATCTGACT
TATAAGTCACCTGACCACACCTTCCCACCTTGTTTTTCAATGTAAAGGTGATGGAACCCACGTAAAAGGGGGTGACTTAT
AAGTTTTAAGTTAGGGTGAAGCAACTTATGACTTATAAGTTGGGGTGACTTATAAGTTGGGTCCGTTTGGCAAAATAAGT
CATTTTTTGCACTTTTCGACTTATAAGTTGGTGACTTATTTAAAACCAAATAGGGCCTTATAAGTTGAGGTAACTTATAA
GTTGAGTCTGTTTGGTAAAATAAGTCACTTTTTTCATTTTTTGACTTATAAGTTGGTGACTTATTTGGAACCAAACAGGT
CCTAAACTA-CATGAATATCCGTCCTAAAATAAGACATA-GGGCAGTTGGTGGAATGTTATTGTTCGATGCCACTGTGCT
CGGTTTGCTTATAGTTTGCCTATGCAGGAATAAGATATATATGCTCTTGGGAAGTACATGTTTGGTTGATAATTGAA---
--------------------------------------------------------------------------------
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----------------------------------------------------ACATCCATGAGTTCTTTTGGTCATAAAT
AACACTTGTTTCGATGCTTGCCGACACTTTGAAGGCTTCCCTACTGTT-----------------------------CCG
GGGCTATGCATTGGGTAAATAAGAAATTATTTGGCGCCTTAAGCATCAATTTTTTTTAAGCTCCT---TAAGCATCAAAT
AGGACATTCCACGAATACAC------------------------------AGTGAGTTTCTTAAAGGCTGTTATGGTGTG
G-CCAATGGGCTTTTCTCTTGGCCCACCGAACATTTATTCTCCGGCTCTGTCATCTCCGGCCATGATAACATGTGTGGCA
TGTCACCTCCACACATGCACCTGGGAGCGG------ATCTGCATCTAGCTTGGTTCACGTGCACACCTCTGTGTATTGAA
AGATTCGGTGCCTATTGTAAGCCTGAGACGGTTGTGTTTTTT-AGCTGCTTGCTGCCTCGTAGGCTGACTATCAGACAGA
AGTCGGCTCTGTAGCA----------------------------------------------------------------
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>chr3B_623
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-------------------------------------------------------------------TTTGTTGGGCCGT
GGCCTCGTCGTCGTCTGCGGCCGAGAAAGCTCGCGCTGCCAGGTGCGGAAGGAGACGAGGCGATTTTGAAATTTGGGCGT
CCCGTTCTGCCGTTGCTGGTCATCATCACCATCGTCTCATATTCCAAGATGCTCTTGACCAAAATGCTTTCACACGGTGA
GA--TTGAGAAAAAGAAAAAAGTCTCGTGCCACGGCGGCGACGTGTGCTAGAAAACTACTGTAGAAACGAAGCAACCAGC
AGTCTTCTTTCTATTCCAAAAGACAAAGGCAAAATGACATCCACTTTGACGAGCTGAGAGGAATTCCTAGCAC-------
TATATATACACGTACCAAC--CATACCCATCTTCCAGATCACGAACAAGGAAGCAAGATGACTGAACCGGTGAAGCTCAT
CGGCGCCTTCGGCAGCCCGTTCGTCCACCGTGCGGAGGTGGCCCTGCGCCTCAAGGGAGTCGCCTACACGCTCATCACGG
AAGACCTCTCCAACAAGAGCGAGCTGCTGCTCCGCCACAACCCCGTCCACCACAGGGTGCCGGTGCTCCTCCACGGCGAC
AAGGCCATCTGCGAGTCGCTGGTCATCCTCGAGTACATCGACGAGGCCTTTGACGGCCCGCCGCTCCTTCCAACCGACCC
CGGCGAGAGGGCCGAGGCCCGCTTCTGGGCCAAGTTCTTTGCGGAAAAGGT----TAGTATGCATGCCTGAATATTA---
---TTCTTTACAACTCAATTTCGTTGTTGCAAAAAGTAGGATTCACCAACAAATTCGTAATAT-------ATTCTCATTA
TGCCGT--GTGTGCGTGAATTGTTTGATC---------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------AGTGCCTGATGTCGGTGTGGCTGGCGCTGTGGACG
GAGG---GCGAGACACAGAAAGTTCTCATGGAGGATGCTAAGGAATACCTGACGATTGTGGAGATGCAGCTGAAGGGGAA
GAGATTCTTCGGAGGCGCTGCCATCGGCCTCGCCGACATCGCCGGCGCGAGCGTGCTGTCCCACTGGGCAGGCGTGCTGC
AAGAGGTCGCTGGGATAACTGTCATGAGCGATGACGAGTATCCTGCTATCCACCGGTGGATGGAGGACTACAACGCTGAC
GAAGTTGTCACGGAGTGCCTGCCGGATCGGGACCAGCTTGTGACCCACTTCACCGCTATCAGAGGAAAGTGCGTTGCCGC
GGCCAAGTCCATGTTACCCAATTATCTAGCCACCAAATAGACCTAAGCTAGTGGTTAGCATGACCCAC--------GTGG
GTTG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----TATTA-CATGAATATCTGTCGTAAAATAAGACATAGGGGCAGTTGGTGGAATGTTATTGTTCGATCAAATTGTGCT
CGGTTTGCT--TAGTTTGCCTATGCAGGAATAGGATATATATGCTCTCGGGAAGTACATGTTTGGTTGATAACTGAA---
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----------------------------------------------------AC--------------------------
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>chr3B_1445
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---------------------------------------------AGTGCTTGATGTTGCTGTAGTTGGCATTGTGGACG
GAGGAGGGCGAGGATCAGAAGGTCTTTGTTATGGACGCAAAAGAGAATCTCGCCCTAGTGGAGGCGCAGCTGAGCCAGAA
GAGGTTCTTCGGAGGCGCCACAATTGGCCTCGCTGACATCGCTGGTGTCAGCCTACTATCCCGCTGGGCAAGCGTGATGC
AAGGGGTCGCTGGGGTGAGCGTGATGACAGACGATGAGTATGCTGCTATCCACCGGTGGATGGAGGACTACAACGCTGAC
GAAGCTTTAA-GGAGTGCTTGCCGGACAGAGACCATCTCATCTCCTACTTCACCACGATCAGGGGAAAGTGCGTCTCCGC
GGCCAAGTCCATGCTACCCAATTATCTAGCCAAGAAATAGT---------CTAATCTGGTAGGTTTTGTCATGATTGTGG
CTTG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----AATCAACATGAAGATAAGTTAAAAAGAGATA---AGGGGGAGCTGCTGGCAAGTTATTGCTCCATGTCACTGCGCT
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-------------------------
>SNPs
SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S---------------S-------SS-------------------
-------SS-S-------------S----S--S-----------------------SSSSSS-----------------S
S-S---S---S---S---S--S-----------S---------S---S---S-SS-----S-------SS-------S--
---------SS-S-SS----------S-------S-----S-----------------S--S---------S------S-
SS-S----------SS----------S--S-----S--------S-S-----------S---S------------S--SS
-S-SSSSS-SSSSSS--S--S-------S-SSSS---------------SSSSS-SSS-SSSSS-SS-SS-SSSSSSS--
SSSSSSSS-S-SSSSSSSSSSSS------S--------------------------------S-S---------------
----------------------------S-------------------S-------------------------------
S------S------------------------------------S------------------------------S----
-------SS-------------------------------------------------S---------------------
--------------------------SS-----------------------------------------S----------
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------S-S---------------------------------------S------------------------------
----------------------------------------------------------S---------------------
-----------------------------------------------------------------------------SSS
SSS----------S-------S-----S---------------S--S-----S---------SSSSSSSS----------
--------------------------S-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S--------------
-----------------S---------------------------------------------------S----------
--------------------S----------------------------S-S----------------------------
------------------------------------------------------S-------------------------
------------------------------------------------SS----S--S--S-S-SS---S---SS-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------S------------------------------------S----------------S-------------
-----------------------------------------------------------------------------SSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------
------------S-----------S-S---SSSS-S-----SSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSS---
---------S-------S-S--------------------------------S----SSSSS-SSSSS--S---------
----------SS-S-S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------S------------SSSS
-S-------------------------------------------------------S------S---------------
-------------------------SSS--SSSSSS---------------------S----------S-----------
----------------------------S------------S------------S-------------------S---SS
----S-----------S-----S--S------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>forward_580
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
TTAACTGGGACGTCCGTTCG------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>reverse_3011
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------TGCGCTTTTCTGAAAAGGCC----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
