>input_sequence_67444
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----------------------------------------------------ATGGCGCCCAGCTTCGGCCGCTCCATCT
CCTTCCCGCTCAGCCCGGCGCGCGTCTCCAGGGCCCGCGCCGCGGCCTACCACGTCCGCTCCGTGTCGCTCCCCTGCCAC
TCCCACCCGCTCCTCTCCCACCTCGCTACCCACATCTCCGCCGTCCGCGCCTGGATCGCCGCCCCCAGCGCGCCCTCCAC
GGGCCTCGCCCGCCTCGACGCGCTCCACGCCGCGCTCGCCGAGCTCCTGCTCCTCCCCGAGGCCCGCGCCGCGTTAGAAA
GCGGGTCCAACACCGCCGACTGCCTCCTCGACAGCTTCCTGAACCTCGCCGACGCCCACGGCGCCTTCCAGGAGTTGCTC
CTCGAGCTCCGCGCCCACTCCGCCGAGGCGCAGGCCGCGCTCCGTCGCCGCGACGACAACAGGCTGGCCTCCGCGGTCCG
GTCCCTGCGCCGCGCCGAGAAGGACCTGGCCCGCCTCGCCGCCTCCGTGCGCGTGGCGGCCAAGTTCCCCACGCCCTCCG
CGTCCACCAGCGCCGCGGAGGTCGAGGTGTCCGTGGTGCTCGCCGAGGCCGTGGCCACCGCGGCGTGCGCGTCCGCCGCC
GTGTTCTCGGCCGTCGAGGCCGTGTCCTCGGCCGCCACCTCCAAGAAGACCACCGCGGCGTCCTCGCTCAGGGCCCTCGT
CATGCGGGCCAAGGCCTCCTCCGACGAGGACAAGGAGGTGGCCGCCCTGGAGCGGCTGGAGGAGGTCGAGGCGTGCGCCG
CCGAGATCGAGAGCGGCAGCGACAAGGTGTTCCGCAGCATCCTGCACACCAGGGTCGCCCTCCTCAACATCCAGACCCAG
ACCTGCTGCTGA--------------------------------------------------------------------
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>chr7D_1_TraesCS7D01G532900
TGTTATTAGTAAATTATATGTACGCTTGTCACTCTAGTGCC------TATG-AAAAAATAATTCGATTGTCACTGTATTC
AGGTGTGCACAG--AGCCAGGCTTCGTTCATCGTGCTGTCGGTGATGCACGGCTCCTTTCCTTCCCTTCCTTTGTGAAGC
GATCGAAGA--------------------------------CGTACAAGCACAAAAGGAATATGCTTAGTACAGTGCTGG
AGTGATCTAAGCCGTCGTTGGATCGTACGGGTGGTGAGATTGACAATGCATGGCGTGTACACATCGGCTCGGGGCCGGCG
GCGTGAACAGGACGGGGGACACCGAGGCAGGCAGGGAGGGGGACAGGCCGGCGCCGCTCGTGGGGTGGCCACTACGGCAG
CA---CACCCTTTGGCTCCATCGCACGGGTGCGTGCCACCGGGACGGCAACGGCAGCCCGTCG---------TGCACGAG
GAAAGGGAACCGGGTCACATGGCGACCAAGCGGAACCGACC----------ACGCGCTCCAGGCGAGATCCATCGATCGG
GACACCGCAACGCCGGCGGCGCTTCCACCCGCGGATCGGCCGGGCAAA-GCATCCACGCGTATGGCCAGCGGCACGGCCA
CACCTACCCCTCGGCGCCCCGGGGAGTCGTGGCGCGCCACGGTCACCACAGCGCGTCCCCGCCGCATGTGAGGTGAGGTG
A-----GCCGCGGCACTGGAGCACGCGCTGCAGGTAGCTAGTACGTGGATCGAGCTCCAGCAGGCAGCACCTACAGGTCC
ACGCGTCCCCGCGCGCCCCCCGCGGATCCTGTCCCCCGGCA-CCACCAACCGCCCAGACGTGCACATGCACAGAGCCACG
GACGCGCCGCGATGCCATCGGCGCACGCGCTCTCCCCAGTCCCCACCCACCGTGT----CGCCCCATGGCCGGCGCC-GC
TCTCCCGCTTTATATACTCCTCTCCACCCCATCCCTCTCATCATTCATCACAGCAAAGCAAGCGCAAGCAGCAGCAGCAG
CAAGTCAACCGTCTAGGCTCC-------------CTCCGGCAGC----AGCAATGGCGCCCAGCTTCGGCCGCTCCATCT
CCTTCCCGCTCAGCCCGGCGCGCGTCTCCAGGGCCCGCGCCGCGGCCTACCACGTCCGCTCCGTGTCGCTCCCCTGCCAC
TCCCACCCGCTCCTCTCCCACCTCGCTACCCACATCTCCGCCGTCCGCGCCTGGATCGCCGCCCCCAGCGCGCCCTCCAC
GGGCCTCGCCCGCCTCGACGCGCTCCACGCCGCGCTCGCCGAGCTCCTGCTCCTCCCCGAGGCCCGCGCCGCGTTAGAAA
GCGGGTCCAACACCGCCGACTGCCTCCTCGACAGCTTCCTGAACCTCGCCGACGCCCACGGCGCCTTCCAGGAGTTGCTC
CTCGAGCTCCGCGCCCACTCCGCCGAGGCGCAGGCCGCGCTCCGTCGCCGCGACGACAACAGGCTGGCCTCCGCGGTCCG
GTCCCTGCGCCGCGCCGAGAAGGACCTGGCCCGCCTCGCCGCCTCCGTGCGCGTGGCGGCCAAGTTCCCCACGCCCTCCG
CGTCCACCAGCGCCGCGGAGGTCGAGGTGTCCGTGGTGCTCGCCGAGGCCGTGGCCACCGCGGCGTGCGCGTCCGCCGCC
GTGTTCTCGGCCGTCGAGGCCGTGTCCTCGGCCGCCACCTCCAAGAAGACCACCGCGGCGTCCTCGCTCAGGGCCCTCGT
CATGCGGGCCAAGGCCTCCTCCGACGAGGACAAGGAGGTGGCCGCCCTGGAGCGGCTGGAGGAGGTCGAGGCGTGCGCCG
CCGAGATCGAGAGCGGCAGCGACAAGGTGTTCCGCAGCATCCTGCACACCAGGGTCGCCCTCCTCAACATCCAGACCCAG
ACCTGCTGCTGATCCAATC------CCTAGCTAAT---GTAGCCTAGTGTAGTCTTATTTTGGAGGATCATCCTGATCCT
GTCCAAACCCTCAAGTGTACATAC--CAGTCGATCAACGGATTAA-----AGCAAAGCAAAAGCTTTTGTTTGTTCCATT
TCCATAGCAGACTGTTGATGTCTCTT----TACTCTGACAAATCGTATATTTCGCTCGCGCA-------TGGAACACAAA
CACATGGTGAACTGTCATACCAAAGGCATGAAGGTTTCCCATATAGCTCTTGATCAAAGTGTAGATCGTAATCGTATCAG
GTGATTTTTGGATGCGGTTATCTTCCCTTGGGATACCTTGGGATTTCAATCCATGTTGGTCCTCTTCAACAAGATCGCGA
CACCCAAACGCGCCGCGCCGCCACACTGTCGTCTCTTCAGTCTTCACCCACATAAGAGTTCACTCACAGAAAGTGAAAGT
CAACTCCGAAGTGTGTGTGTGTTTGCGAACAACCTCGATGTGTCTGTGATCTGTCCCGTGATTAGCGCATGAGGGCCATT
AGGTTCCGCCGCTGCTCTCCTGCTGCCTCCTGCCCTCCCCAAAACTGCTTGCGA----------------CCCAGGTGCT
GCAACGGGGCGCGCTGCCCTCACCAATTCTCCACACTCCAATCAAAAGGTGAACACTATCCAGTAACCTGTC---TTTTT
CCTTTTCTTGCGTGGAGTAATCTATCTCAATTACTGTATAATAATCTCTCTCCGTTCTCATCCCTTTCGTGTCAAATTTA
TACATCAGATTCTAGTTTTGAGATTTGTAGCTCGACAGTTAATTATGAAGAGAAATCACGAGACACTGTAAACATCAATT
CATGCTTTTCAATCCTTGGACGTCCCATCTAGCTTCTGCGTGGCAGACTTTTTAGGGCATATGGCATCGCTTCGATCGTC
TCACTACCTCATACGTCATGCATGCCGCCATGCAAGCACATGCATGATCACTAGTACATAGCACGCAAATGAAGACGCTT
GCATGGTCGGCAAAAACG
>chr7A_2
-GTTATCAGTAAATTAA--GTACACTTGTCACTGTAGTAGTAGTACGTATGAAAAAATTAATACGATTGTCACTGTGTTC
AGGTGTGCGCAGAGAGACAGGCTTCGTTCATCGTGCTGTCGGTGATGCACGGCTCCT----TTCCTTTCCTTTGTGAAGC
GATCGAAAACGGTGCATGATGGACGTGGGAGATTAATTCGTCGTACAAGCACAGAAGCAATATGCTG-GTACTGTGCTGG
AGTGATCTAAGCCGTCGTTGGATCGTATGGGTGGTGAGATTGACAACGCATGGCGTGTACACCGGCTC---GGGCCGGCG
GCGTGAACAGGACGGGGGGCACCGGGGCAGGCAGGGAGGGGGACAGGCCGGCGCCGCTCGTGGGGTGGCCACTAGGGCAG
CA---CACCCTTTGGCTCCATCGCACGGGTGC----CACCCGGACGGCCACGGCAACGGCAACCGGCCGTCCTGCACGAG
GAAAGGGAACCGGGTCACATGGCGACCAAGCGGAGCCGACCGCATGGACGGACGCGCTCCAGTC---------CGATCGG
GACACCGCAACGCCGGCGGCGCTTCCACCCCCGGATCGGCCGGGGGGGCGCATCCACGCGTATGGCCAGCGGCACGGCCA
CACCTACCCCTCGGCGCCCCGGGGAGTCGTGGCGCGCCACGGTGACCACAGCGCGTCCCCGCCGCATGTGAGGTGAGGCG
ACCT-CGCCGCTGCACTGGAGCACGCGCTGCAGGT-----------GGATCGAGCTA----------------CAGGTCC
ACGCGTCCCCGCGCGCTCCCCGCGGATCCTGTCCCCCTCCCGCCACCAACCGCCCAAACGTGCACATGCACAGAGCCGCA
GACGCGCCGCGATGGCATCGGCGCACGCGCTCTCCCCAGTCCCCACCCACCGTGTCGCTCGCCCCATGGCCGGCGCC-GC
TCTCCCGCTTTATATACCCGACGCCACCACGTCCCTCTCATCATTCATCACAGCG-AGCAAGCGCA---AGCAGCAGCAG
CAAGTCAACCGTCTAGGCTCCTCCAGCTAGCTCGCTCCGGCAGCGGCAAGCAATGGCGCCCAGCTTCGGCCGCTCCATCT
CCTTCCCGCTCAGCCCGGCGCGCGCCTCCAGGGCCCGCGCCGCGGCCTACCACGTCCGCTCCGTCTCCCTCCCCTGCCAC
TCCCACCCGCTCCTCTCCCACCTCGCCACCCACATCTCCGCCGTCCGCGCCTGGATCGCCGCCCCCAGCGCGCCCTCCAC
GGGCCTCGCCCGCCTCGACGCGCTCCACGCCGCGCTCGCCGAGCTCCTGCTCCTCCCCGAGGCCCGCGCCGCGTTAGAGA
GCGGGTCCAACACCGCCGACTGCCTCCTCGACGGCTTCCTGAACCTCGCCGACGCCCACGGCGCGTTCCAGGAGTCGCTC
CTCGAGCTCCGCGCCCACGCCGCCGAGGCGCAGGCCGCGCTCCGGCGCCGCGACGACAACAGGCTGTCATCCGCAGTCCG
GTCCCTCCGCCGCGCCGAGAAGGAGCTGGCCCGCCTGGCCGCCTCCGTGCGCGTGGCGGCCAAGTTCCCCACGCCCTCCA
CGTCCACCAGCGCCGCGGAGATCGAGGTGTCCGGGGTGCTCGCCGAGGCCGTGGCCACCGCCGCGTGCGCGTCTGCCGCC
GTGTTCTCCTCCGTCGAGGCCGTGTCCGCCGCCGCCACCTCCAAGAAGACCACCGCGGCGTCCTCGCTCAGGGCCCTCGT
CATGCGGGCCAAGGCCGCCTCCGAGGAGGACAAGGAGGTGGCCGCCCTGGAGAGGCTGGAGGAGGTCGAGGCGTGCGCCG
CCGACATCGAGACCGGCAGCGACAAGGTGTTCCGGAGCATCCTGCACACCAGGGTCGCGCTCCTCAACATCCAGACCCAG
ACCTACTGCTGATCCAACTCAATGCCCTAGCTAGTGTAGTAGCGTAGTCTAGTCTTTTTTTGGAGGATCATTCTGATCCT
GTCCAAACCCTCAAGTGTACATACACCAATCGATCAACGGATTAATGCAAAGCAAAGCAAAGGCTTTTGTTCCATTTCCA
T--A--GCAGACTGCTGGTGTCTCTT----TACTCTCGCAAATCGTATATCTCGCTCGCGCATGGAAGATGGAACACAAA
CACACGATGAACTATCATAC------------------------------------AAGTGTAAATCGTAATCGTATCAG
GTGATTAC------------------------------------------------------------------------
-----------------------CACTGTCGTCTCTTCAATCTTCACCCACATGAGAGTTCACTCACGGAAAGTGAAAAT
CAACTCCCAAGTGTGTGTGTGTTTGCAAACAACCTCGATGTGTCTGTGATCTGTCCCGTGATTAGCGCATGAGGGCCATT
AGGTTCCGCCG------------------CTGCCCTCCTCAAAACTGCTTGCGATCAGATTTGATGGCGACCCAGGTGCT
GCAACAGGGCGCGCTGCACTCACCAATTCTCCACACTCCAATCAAAAGGTGAACACTATCCAGTAACCTGTCTTTTTTTT
TCTTTTCTTGCGTGGAGTAATCTATTTCAATTACTGTATAATAATCTCTCTCCGTTCTCTCA-------TGTCAAATTTA
TACAACAGATTCTAGTTTTGAGATTTGTATCTCGACAGTTAATTATGAAGAGAAATCACGAGACACTGTAAACATCAATT
CAGGCTTTTCAATCCTTGGACGTCCCATCTATCTTCTGCGTGGCAGTCTTTTTAGGGCATA-------------------
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>chr7B_3
--TTATTAGTAAATTATAAATACACTGGCCACTGTATTGCC------TATGAAAAAGATAATGCGATTGTCACTGTATTC
AGGTGTGCACC--GAGCCAGGCTTCGTTCATCGTGCTGTCGGTGA-----------------------------------
--------------------------------------------------------------------GTACAGTGCTGG
AGTGATCTAAGCCGTCGTTGGATCGTATGGGTGGTGAGATTGACAATGCATGGCGTGTACACACCGGATCGGGGCCGGCG
GCGTGAACAGGACAGGGGACACCGAGGCGGGCAGGGCGGGGGACAGGCCGGCGCCGCTCGTGGGGTGGCCACTACGGCAG
CACACCACCCTTTGGCTCCATTGCACGGGTGC----CACCGGGGCGGCCACGGCAACGGCAACGGGCCATGATGCACGAG
GAAAGGGAACCGGGTCACATGGCGAGCAAGCGGAGGCGACCACATGGACGGACGCGCTCCGGTC---------CGATCGG
GACACCGCAACGCCGCCGGCGCTTCCACCTCCGGATCGGCCGGGGCACCACATCCACGCGTATGGCCAGCGGCGCGGCCA
CACCCACCCCTCGGCGCCCCGGGGAGTCGTGGCGCGCCACGGTCACCACAGCGCGTCCCCGCCGCATGTGCGGTGAGATG
AGCTCCGCCGCGGCACCGGAGCACGCGCTGCAGGT-----------GGATCGAGCCC----------------CAGGTCC
ACGCGTCCCCGCCCGCTCCCCGCGGATCCTGTCCCCCGGCA-CCACCAACCGCCCAAACGTGCACATGCACAGAGCCACA
GACGCGCCGCGATGCCATCGGCGCACGCGCTCTCCCCAGTCCCCACCCACCGTGTCGCTCGCTCCATGGCCGGCGCCCGC
GCTCCCCCCTTATATACCCCTCGCTACCCCATCCCTCTCATCATTCATCACAGCG-AGCAAGCGCA---AGCAGCAGCAC
CAAGTCAACCGTCTAGGCTCCTCCAGCTAGCTAGCTCCGGCAGC----AGCAATGGCGCCCAGCTTTGGCCGCTCCATCT
CCTTCCCGCTCAGCCCGGCGCGCGCCTCCAGGGCCCGCGCCGCGGCCTACCACGTCCGCTCCGTCTCCCTCCCCTGCCAC
TCCCACCCGCTCCTCTCCCACCTCGCCGCCCAAATCTCCGCCGTCCGCGCCTGGATCGCCGCCCCCGGCGCGCCCTCCAC
GGGCCTCGCCCGCCTCGACGCGCTCCACGCCGCGCTCGCCGAGCTCCTGCTCCTCCCGGAGGCCCGCGCCGCGCTGCACA
GCGGGTCCAACACCGCCGACTGCCTCCTCGACGGCTTCCTGAACCTCGCCGACGCGCACGGCGCGTTCCAGGAGTCGCTC
CTCGAGCTCCGCGCCCACGCCGCCGAGGCGCAGGCCGCGCTCCGTCGCCGCGACGACAGCAGGCTGGCCTCCGCGGTCCG
GTCCCTGCGCCGCGCCGAGAAGGAGCTGGCCCGCCTCGCCGCCTCCGTGCGCGTCGCGGCCAAGTTCCCCACGCCCTCCG
CGTCCACCAGCGCGGCGGAGGTCGAGGTGTCCGGGGTGCTCGCCGAGGCCGTGGCCACCGCGGCGTGCGCGTCCGCCGCC
GTCTTCTCCGCCGTCGAGGCCGTGTCCTCCGCCGCCACATCCAAGAAGACCACCGCGGCGTCCTCCCTCCGGGCCCTCGT
CATGCGGGCCAAGGCCTCCTCCGACGAGGACAGGGAGGTGGCCGCCCTGGAGAGGCTGGAGGAGGTGGAGGCGTGCGCCG
CCGAGATCGAGAGCGGCAGCGACAAGGTGTTCCGCAGCATCCTGCACACCAGGGTCGCGCTCCTCAACATCCAGACCCAG
ACCTGCTGCTGATCCAATCCGATGCCCTCGCTAGT---GCAGTGTAGTGTAGTC-TTTTTTGGAGGATCATTCTGATCCT
GTC-AAACACCCAAGTGTACAT--ACCAATCGATCAACGGATTAA-----AGAAAAGCAAAAGCTTTTGTTCCATTTCCA
T--ATAGCATACTGCTGACGTCTCTTAATTTACTCTCACAAATC------------------------------------
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>SNPs
S-----------------S----S---------S----------------------------S-----------------
---------------------------------------------------------SSSS----S--------------
-------S---------------------------------------------S---S--------SS------------
---------------------------S-----------------------------------S----------------
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--------------------------------SSSS------------S------S-SSSSSS-----------------
----------------------------------S---------------------------S-SSSSSSSSS-------
------------------------------S-------------SS-S--------------------------------
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-----------------------------------SSSSSSSSSSS-----------SSSSSSSSSSSSSSSS-------
----------------S---------------------------------------S----------------------S
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-----------------S----S-------------------------------SS----------SSS-----------
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------------------------S---------------------------------------S--S------------
--------------------------S-----------------------------------------------------
------------------------------------------------------------------------------S-
--------------------------------S-------------------------------S----------S----
------------------S-------------------------------------------------------------
------------------------S-------------------------------------------------------
---------------------------------S----------------------------------------------
--------S--------------------S--------------------------------------------------
----------------------------------------------------S---------------------------
----------------------------------------------------------S---------------------
---------------------------------S---------S------------S--------------S--------
----------------------------S------------------------------------------SSS-SSSSS
-SS-----------S---------------------S-------------S-----------------------------
----S-S------S------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S----------------
------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSS----------------S-------------S-------------S----------S-
-------S------------------S-----------------------------------------------------
-----------SSSSSSSSSSSSSSSSSS---------S-----------------------------------------
-----S-----------S--------------------------------------------------------------
S------------------------S---------------------------------SSSSSSSSSS-----------
----S------------------------S--------------------------------------------------
--S----------------------------S--------------S--------------SSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS
>forward_780
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----------------------------------------GTACGTGGATCGAGCTCCAG--------------------
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>reverse_2340
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-------------------GCCACACTGTCGTCTCTTCA-----------------------------------------
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