>input_sequence_67420
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------------ATGCAT---CCGTTTCGCGTCCCGGCGTCCGCCGCCGCCGCCGTGCTCTGCTCAGCCACGCTGCTGCT
AACAACCGTCCTTGCCACCGACGCCATAAACACCACCGCGCCGT------------------C-----------------
----GTCCTGCGACCCGGCGGCGTGCGGGGGCCTGCGCATCGCCTACCCGTTCTGGCTCGACGGCACGCACCTGCCGGAG
TGCGGCTACCGGGCCTACCAGGTCAGCTGCGACGGCAACGGCACGGCCTCCCTCAAGAACTCCCTCTGGACGTACCAGAT
CCGGGAGATCAATTACGGGGACGACAACGGCACCTTCCGGATCACCAACGCCCAGCTCACCGACGGCACCTGCGACATCG
AGCTGCGCGTGAACGCCTCCGCCGACCTCGGCCTCGCGCCGTTCAGCATCAGCGCGGCTAACCGGCAGCTCTTCTTCCTC
TACAACTGCACCGACCAGCAGGCGCGGCAGCCGCCGCCAACGTGGGCGCACGTGAACTGCGCCAACGGCTCGCGCAATG-
-----ACTCGTTCGCGTTGCTCGCCGGCGGGTACAAGCCCGAAGACAAATGGGGGCCGCTGCCGGGAAACTGCACGGTGT
CGATGATGCCAGTGCT----GGGCTACCCACGGGCGGCCGGAAAGGACTACCGGCGGCTGATGAAGGACGGCTTTCTTCT
GGAATACACGGTCGACGACTGTGCGGGGTGCGTGGACAGCGGAGGGCTTTGCCGGGTTAACACCGTCTACGACTCCTTGG
AGTGTCACTGCCCCGACGGCGTGTCCGACTTCATCATCTGCGGCGGTCAGTGTCAATTCATCTCGGTTTTACCTCTTTTT
AATCTCCGTAGACCTGCTAATTAG--------------------------------------------------------
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------------
>chr3D_1_TraesCS3D01G044900
CTAGCATACTCGAGGAGAGCGCCGGCACTGGCGCACAACAAGATACTAAATTAGAAAGACGTCTTGACCATCGACGTGTG
GAGAAATACGAGAAAGAGCTCATA---------------------------------------GGTTTGTAGATTAGTTA
ATTTGGTAGAGAGAAAATATATAATGAGATGAAATA----TACCACACATCAGTTACGGAATAGTTGGTAGTGAGCACGA
GTGATGGGGTG--GGTTGTAAAAAAAGGAGCGAAGGTGAAGGAGCCTTTGGGATGTTTTGTGAAGACAAAGGCTA-GCTC
CTTGCTTTATCATCTTCGTTCGTTCACTCGTAGTCAACCTTGCCGTGCCCGCGGCGGCGGCTGGAACGCCGTGGCGCCGC
CCCGTGTGGCGGCGCTCTAGATAGAAA---TAGAACCATGCGCTGATTTGGGTGGGTAGGCCCCACGTCGATGCATGCAT
GCATGCAGT---------GTAACGCGTCTTG------------------------------GTCAAGTCTACGTACGCAT
ACAGAGGCTCAACTTGCTCTCTCTCTCTTTTTTGCATCGATACAGAGGCTAGCTTAGCATGCAAGC------ACTCGTTT
AGT-----------------------------------------------------------------------------
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---------------------------------TTGCAACAAATTATTACA-----------------------------
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------------------------GCCCACAGCCACAGGACAAGGATACGGTAACGACCAGAGCACGCGGCCGTTTTACT
TTACTCGCTCGCGGAAAATGGTAGAGGCGGAAAGGTTGTTTTTCCGTGCAGTAGGTAAGGATGCGTTCAAA-CCCAGACC
CGGACCGACGACCTCCCTTC-TCCGGTCAATGACATGCGGGCCCGCGCCGCCGTGAGGACCCACATGGCGGGTGAGCTCC
CACTC--CCACTCGCCGG--------TGGTGTCCACTTCAGTCAGTCAAACTCCCTGACGACGAACGGTCAACACATCCG
GCAACCAT----GCATCCATGAATGTCCCGGTGCTTT-------------CCTTCTTCTCATCCTCAG--CATCCTTTCC
TCTCAACGTTACCCAAATCTCCTACGCCTTCCAGAGCATCCCGTAGCCGGCGGCCTCTCCCTTT----CGTTGCAACAAC
AAGATCGACGCGATGCAT---CCGTTTCGCGTCCCGGCGTCCGCCGCCGCCGCCGTGCTCTGCTCAGCCACGCTGCTGCT
AACAACCGTCCTTGCCACCGACGCCATAAACACCACCGCGCCGT------------------C-----------------
----GTCCTGCGACCCGGCGGCGTGCGGGGGCCTGCGCATCGCCTACCCGTTCTGGCTCGACGGCACGCACCTGCCGGAG
TGCGGCTACCGGGCCTACCAGGTCAGCTGCGACGGCAACGGCACGGCCTCCCTCAAGAACTCCCTCTGGACGTACCAGAT
CCGGGAGATCAATTACGGGGACGACAACGGCACCTTCCGGATCACCAACGCCCAGCTCACCGACGGCACCTGCGACATCG
AGCTGCGCGTGAACGCCTCCGCCGACCTCGGCCTCGCGCCGTTCAGCATCAGCGCGGCTAACCGGCAGCTCTTCTTCCTC
TACAACTGCACCGACCAGCAGGCGCGGCAGCCGCCGCCAACGTGGGCGCACGTGAACTGCGCCAACGGCTCGCGCAATG-
-----ACTCGTTCGCGTTGCTCGCCGGCGGGTACAAGCCCGAAGACAAATGGGGGCCGCTGCCGGGAAACTGCACGGTGT
CGATGATGCCAGTGCT----GGGCTACCCACGGGCGGCCGGAAAGGACTACCGGCGGCTGATGAAGGACGGCTTTCTTCT
GGAATACACGGTCGACGACTGTGCGGGGTGCGTGGACAGCGGAGGGCTTTGCCGGGTTAACACCGTCTACGACTCCTTGG
AGTGTCACTGCCCCGACGGCGTGTCCGACTTCATCATCTGCGGCGGTCAGTGTCAATTCATCTCGGTTTTACCTCTTTTT
AATCTCCGTAGACCTGCTAATTAGA-----TCTCAAGCTTCGGAA----ATTATCTCGCATGCCATTATTAGTATCAGTA
TTACCTCAAACGTGTTTGCAAATGTCT-AAGTGACTGCGAGAGCCAACGGACAGGCTATATGTATGTAG------CCCCA
GCCATGCCATGTGGTTAAACCAACGTTTAAAGG-----------------------------------------------
---------------------------------------------AACACATTTGTTATTTCTCATGCAACTGAAAATAA
ATTTCGGATCAGTTGATTCTCGATTTCCATTGACAATACGCTGTGGAGATCCAAGGTCCCGCATTAGATAGCAACCTGGC
AAGAGGTAGGAATGGCGCGGTGAGCCATGATGTCACGGGGGAAGGCAAGGAATG--------------------------
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-----------------------ACTTCGCCAAAGGTAGGAATGGTGCGGCGAGGCATGATGTCGCGGGTGAAGGCAAGG
AATGATCTCGCAGCTG------------------------------GAGGTAGGAATGGCGCGGCGAGCCATGATGTCAT
GGGTCAAGGCAGGG-AATGACTTCGCCATATGTAGGAATAGCGAGACGAGCCATGATGCCAGAGATAGTGTAAAAAATAA
AGCCTCTTCAAATTTTTCTGTCCGCTTTGATTGATAGAAATTTTGATCCAAAATAGTTTGCAATTGATCTTATGGAAATT
CCTGGATGGACTCGAATATTCGAGTGATTGAGGATTTGCGTCCCACAGAACTACCATTTTAAAAAAGTGACCGAAAACTA
CCAAGATTTTATAATTTTATGACTAAAAACTACCACTTTCAGATAAAGACCAGTTTAGACGATTTAAGCGTGTTGTCAAA
GTCAACGCTAACGTGGGTCATCTGTCAACACTAGCGGCTCAGTCGTGCTCGTTGCCTCCGTGCTGAACGCCACCAACGGC
CTCGTTGACGTTGAGGTCGGCTCGTTGAGCTCGTATGGGCCGCGGCCGCCGCCGGGCGTCGGCCTGAACGTCACCATCAC
GCCCAACCGGTCGTCGCCCGGCGCCGACACTAGTCACCTCACCGTGCGGATCGAGTACGACGACCCCGCGCACCGCCTCT
CGGTCTACGCCC
>chr3B_1
CTAGCATACTCGAGGAGAGCGCCGACACTGGCGCACAATAAGATACCAAATTAGAAAGACGTCTTG--------------
---------GAGAAAGAGCTTGAGAACATGTGGTATATAAAAGCAAGGAAATTATAGGGAAAGGGTGTGTAGATTAGTTA
ATTTGGTAGAGAGAAAATATATAATGAGATGAAATAGACGTACCACACATCAGTTACAG-ATAGTTGGTAGTGAGTACGA
GAAGTGATGGAGTGGTTGTAAAAAAAGGAGCGAAGGTGAAGGAGCCTTTGGGATGTTTGGTGAAGACAAAGGCTAAGCTC
CTTGGTTTATCATCTTCGTTCGTTCACTCGTAGTCAACCTTGCCGTGCCAGCGACGGCGGCTGGAACGCCGTGGCGGCGT
CTCGTGTGGTGGCGCTCTAGATAGAAA---TAGAACCATAAACTAATTTGGGTGGATGGGCCCCACGTCGATGCATGCAT
GCGTGCAGTCATGCAGGCGTAACGCCTCTTGTCCGATTCGGAGGA---------CTCCTGAGTCAAGTCTACGTACGCAT
ACAGAGGCTTAACATGTAAGCTGGAGTACTAGCTACTGTATAATGTTCGCTCGTTTGCTCAAGAATCCGCCAATTCAGTT
AGAGCATCGTACGCTCGCCTCCTGCCGTCAGGGCGCCTTTCTCCGCCGCCGTCCTCCGGCGGCTCCTCTCCGC-------
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---------------------------------------------------------------TGATGACCTCGGTCGTC
AATGGTGAGGGGGATCGCCGGATCCAAGCGTGTGGATTGTTTTAGGCATTAGTTTTTTAGGATTTTGGGTTGTTCATCGT
CATGGCTTCGGCGCTGGCGATGGCGGCGTCGATTAATAAATCTTCAGATCCTTCCCCAACGAGGCGATCCGCTTTGGGGT
GGACTTGAAAACCAGACTGTTCAAGCCAGGATGGTGCGGCGGCGGCATCCTCGTGGTGGACCTGTGTCCTCGGGCTCCGC
CGTTGCGACGACGTTTGCTCCAGCGCCGGCGTGGAGCTTGGGAGGTAGTCCAGGAGCGGATGCAGATTGTGGTCTGCATC
GATGGCATCTGGAAGATGGTGGATTTCGGTTCGTGGTTCGTGGCAGGTAGGTATGGTTTTCTCCACCAACGTCTTAGTTG
GGCGGGGGAGCCAGATCTGAAGTTCGATGGCGTGTCCGGGGTGT------------------------------------
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-----------------------------------------------------------------------------TGC
CTCGGTCTGATTCGTTCAACGGCAATGGCTTCGCCTTTATTGGCGAGCCACCTTGGAGGTCCGCAAAGCTGCATATCAGC
GATGGAGCCGCGTCGAGCTTGGGTGTGGAGGCGATCCGTCAT--------------------------------------
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----------------------------------------------------------TTTCTCCTTTGGTGGCTGCTAT
GGTGGTGTCAGAGGCAGGTGACGGGCGTTGGCGTCAAGCTCAGAGGATTCTTTAGTCTTGTTTGTAATTTTACTTCTTGG
CTGGTGTTCCTGTGTGCAAAGGCTGGCGTTCTGCTGTCTTTTCAGATTTGTCAGGTCGGTATGTACGTGGCTTGTACTAT
GATCCTTGTGATATAAATGAGACACGTATTA-------------------------------------------------
------------------------------------------------------------CTATGAAAAAAAAATGTTCC
GCTCGTTTAC----------------------------------------------------------------------
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----------------------------------------AAACTACTGCAACGCGTTTGAGAAAATAAAGACA---GTC
CACGCGTATGAATGATACT------ACCTTCTCCCGTGAGGGCGGAAAGCCGAAAATATATGCATGATACGTTCTCCCCG
----GTCACTGTGCGTATTAGGGCATGGCCAATGCATAGCCCCAGGGTGATGCCTCACATGCCATGTAGGATCGGATGAC
AGAAAAAGTAGGTTCGGATGGGGAAGCAGGATCCTCTCCAGGAGGCGGGTGCTTGGAGAGAAAAGTGTGACCCGGAGCAT
AAAGTTGGAAAAAGTTGAAGTGAAGATGAGGGATGCATGTGTAGTGAGATTCACTTTTTATTTTTTGATGAGGCCCAGTA
GTAGTAGCCTGCATTGGAGAGAAAAAATCAACACATATGCCTCAAATTACTTTTTGTCATGAAGCATCTGTATCCATATG
ACATCATTGTACATGCCCTTATTCGCCCACAGCCACAGGACAAGGATACGGTAACGACCAGAGCACGCGGCTGTTTTACT
TTACCTGCTCGCAGAAAAGGGTAGAGGCGGAAAGGTTGTTTCTCCGTGCAGTAGGTAAGGATGCGTTCAAACCCCAGACC
CGGACCGACGACCTCCCTTCCTCCGGCCACTGGCAACCGGGCCAGCGCCGCCGTGAGGACCCACATGGCGGGTGAGCTCC
CACTCGGCCACTCGCCGG--------TGGTGTCCACTTCAGTCAGTCAAACTCCCTGACGACGAATGGTCAACACATCCG
GCAACCA----CGCATCCATGAATGTCCCGGTGCTTT-------------C-TTCTCATCATCCTCATATCATCCTTTCC
TCTCAACGT------------------CTACCACAGCATCCCGTAGCCGGCGGCCTCTCCCTCCCTTCCGTTGCAACAAC
AAGATCGACGCGATGCATACGCCGTTTCGTGT---------CGCCGCCGCCGCCGTGCTCTGTTCAGCCACGCTGCTGCT
AACAGCCGTCCTTGCCACCGACGCCATAAACACCACCGCGCCG------------------AC-----------------
----GTCCTGCGACCCGGCGGCGTGCGGGGCCCTGCGGATCGCCTACCCGTTCTGGCTCGCCGGCACGCACCTGCCGCAG
TGCGGCTACCGGGCCTTCCAGGTCAGCTGCGACGGCAACGGCACGGCCTCCCTCAAGAACTCCCTCTGGACGTACCAGAT
CCGGGAGATCAATTACGGGGACGACAACGGCACCTTCCGGATCACCAACGCCCAGCTCGCCGACGGCACCTGCGACATCG
AGCTCCGCGTGAACGCCTCCTCCGACCTCGGCCTCGCGCCATTCACCATCAGCGCGGCTAACCGGCAGCTCTTCTACCTC
TACAACTGCACCGACCAGCAGGCGCGGCCGCCACCGCCTACGTGGGCGCACGTGAACTGCGCCAACGGCCCGCTCAATG-
-----ACTCGTTCGCGTTCCTCGCCGACCGGTACATGCCCGAAGACAAATGGGGGGCGGTGCCGGGAAACTGCACGGTGT
CGACGATGCCGGTGCT----GGGCTACCCAGGGGCGGCCGGAAAGGACTACCGGCGGCTGATGAAGGAGGGGTTCCTTCT
GGAATACACGGTCGACGACTGTGCGGGGTGCGTGGACAGCGGAGGGCTTTGCCGGGTTAACACCGTCTACGACATGTTAG
AGTGTCACTGCCCCGACGGCGTGTCCGACTTCATCATCTGCGGCGGTCAGTGTCAATTCATCTCGGTTTTACCTCTTTTT
AATTTCCCTAGACCTGCTAATTACCATAGCTCTCAAGCTTCGGAAATTAATTATCTCGCATGCCATTATT------AGTA
TTACCTCAAACGTGTTTGCAAATGCCAAAAGTGACGGTGAGAGCCAACGGACAGGCTAGCTATATGTATGTAGCCCCCCA
ACCATGCCATGTGGTTAAAACCCACGTTAAGGAAACACATTTGTTTTGTTATGTAGCTCCCCGGCTCCATTACTAGAAAG
AAGCCTGACATCAGGTCTCAGGTGCAGATGTTTTACAGAAAGGAAAACACATTTGTTACTCCTCATGCAACTGAAAATAA
ATTTCGGATCAGTTGATTCTCGATTTTCATGGACAATGTGTTGTGGAGATGCCGACATAGGGCGGCGCCCTTGGCAGGGT
C--------------------GAGTCATGATGTCGCTGGTGAAGGCAAGGCCAAGACTAAAGGAGAGCTCGGAGAAGAAA
TCACATCCAAGGAAGAAGATGAACATTCATGTTGGGAGATGGAGACAGAAGAAAAGGAAGATATGTCCGCACATTTTTTT
TTATCCAACGGCTCAGAGCCATTCGTTCTAAAAACGACAGGAACTTAAAACTTTTCAAACAAAAACTCCTAGGCGGTGCC
TTGAAAAAAGAAACTAATGTAATACTTATCCAGAGGTAGGAATGGTGCGGCGAGCCATCATGTTGCGGGTGAAGGCAAGG
AATGAGCTCGCCGGAGGTAAGAATGGCACGGCGAGCCATGATGCCAGAGGTAGGAATGGCACGGCGAGCCATGGTGTCAT
GGGTGAAGGCAAGGAAATGACTTCACCATATGTAGGAATAGCGAGACGAGCCATGATGCTAGAGGTAG------------
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>chr3A_255
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-----------------------------------------------------------GTGAAGACAAAGGCTA-GCTC
CCTGCTTTATCATCTTCGTTCCTTCACTCGTAGTCAACCATGCCGTGCCGGCGACGGCGGCTGGAACGCCGTGGCGCCGC
CCCGTGTGGTGGCGCTCTAGGAGTAGATGGTAGAACCATGCACTGATTTGGTCGGATAGGTCCCACGTCGATGCATG---
---------CATGCAGGCGTAACGCGTCTTGTCCGATACGGAGGGGGAGGACTCCTCCTGAGTCAAGTCTACGTACGTAT
ACAGAGGCTTAACTTGCTCTT--TCTTTTTTTGACATCGAT----------GCTTAACATGCAAGC------ATTCGTTT
AGAGCATCTCCAACAGGCGTCGGTCGTGCCGCGCGTAAAAAACACATATGCCACGCGCACATCGCCTGGTTTGGCGCGGC
GCGCAGCGCTGGCTCCAGTAGCCGCGCTAAAATGCAGCGCGCGCGACTCGCACAAACAACATATGCATTCAGAAACAAAA
GCAAAAAAGTCAAAAACAAACAAAAATAAATAGTTCAATTTCGTTTATTACAACTCAAACAAACAGTTAATCGTTCAATA
CAACAAATAGTGCAATTAAACACAATAAATAGTTCAACAATACAATAACGAACGCACAAATCATGATGCTCTTTGTCGTC
CATTCCATGCCCACCACTCCTCAATGAGATCCTTATGAAAATCATTATGCGCTGCAGGACGTCAAATGGCATGATAGGAG
GCAACAAAATGGACCACCCTTTCAGCCCTCCGTCGCACTCGCACGG----------------------------------
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-------------------------------------------GATATCCCAAGAGCTCATACTGAGAGTAGTCTACATC
TTGGCCACGCTCATTCTCGATGATCATGTTGTGCATGATCACACAAGCGTGCATTATGTACCAAAGCATCTTTTGATCCC
AAAATCTAGCCGGTCCTCTCACAATAGCAAATTGGGCTTGCAAAATCCCAAAAGCTCTCTCCACATCTTTTCTAGCTGTC
GCCTGAGCATTATGGAAATCAAGATTTTTCTTACCTTCTGGCTTTTTCAACGGCTTGACAAAGGTTTGCCACATTGGATA
GATGCCATCCGCTAGATAATAGCCATAGTTGTATGTACGGCCATTTGCTACAAACTGCACCGGTGACAACTCCCCATTTG
CAATCTTACTCATCAGTGGTGACCGGTTGACAACATTGATGTCACTCAAAGATCCAGGCATTCCAAAGAATGCATGCCAA
ATCCACGTCTCTTGATCGGCCACCGTTTCAAGGATTATAGTGGAACCCTTTTTTTGGCCGTGGAATTGCCCATGCCATGC
CTTTGGACAATTCTTCCAACTCCAATGCATGCAATCTATTGAGCCAAGCATGCCAGGAAAGCCGCGAGCTTTGTTCATCG
CCAAAAGCCTTGCGACGTCTTCAGCGTTGGGAGATCTCAAATACTCCTCGCCAAACACTTGCACAATTCCGACTGCGAAG
CGCTTGACACACATGATGGTTTGGCTCTCACCCATAGCCAAGTGATCATCAACTAGATCAGCCGGTATACCGTATGCCAA
CATACGCAAAGCGGTTGTCACCTTCTGAAAAGTGCTATGCCCGAGCTCTCCGGCGGCATTCCTCCTTTGCTGAAAAAAGC
GGTCATGGCTCGCTAGTTTCTCTGCAATGCGCCTGAACAACTCGGTGCTCATCCTAAATCAGCGACGAAAATATGACTCG
GGGTATGTGGGATTCTCCGCAAAATAATGCCTGATCAATCTGTTGTGGGCATCGATCCTATCCCTCCAAATTTTTTGCCG
ACCCATAACCGAACCACCATGTTTTGGTTTTTTATTAATATGCATAGCTAGGATCATTGCAAGATCCTCCTCCTCTTCCA
TATCAAATTCTTCTTCGGAAGAATCATACGAGGAACTCATCTATAATGTTGAATATTATGCTATAAATAAAAAATTACAA
TCAACATGCACGAAATTCATGGCTTTTGAGCAATACATACCTTCTAGGCGTTTTGTCGAACACCTAGCGGGCGCCGAGCG
GCAGCGAGCATGCGGGCGCTATTCGTCGGCGGACCAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNAGCGCCGGAACGGTCGCCGGGTGGCGCGGTCGGCGCGGCTGGAGGGGGGGTGGGAGGTGCGAGCGAGCGC
GCGAGAGTCCAGCGCACAGGAGCGGGCGCAGCAAATAAGCGGCGCGTGATTGCGTTTCGGCCCGCGCGCTGGACTACGTA
TGCCGCGCGCGCGGTTTTCGCGCGCCTGCTGGAGCAGCTATTCCAGTTGCACGCGCGCTAAAAGAGGGATTTTGCGGCGC
GGCGCTAGTTTGACGCGCCTGTTAAAGATACTCTTACAATAAATTATTACAGCGCGTGTGAGAAAAATAAGACGGTCGTC
CACGCGTACGAATGATACCATTACCACCTTCTCCCGTGAACGCGGAAAGTCGGATCAAA----ATGATCCCTTCTCCCCC
GGCCGTCACTGTATGCATTATTCGCA------------------------------------------------------
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---------------------------CACAGCCACAGGAGAAGGATACGGTAACGACCAGAGCACGCGGCTGTTTTACT
TTACTTGCTCGCGGAAAAGGGTAGAAGAAGAAAGGTGGTTTTCCCGTGCAGTAGGTAGGGATGCGTTCAAA-CCCAGACC
CGGACCGACGACCT----TCCTCCGGCCACTGGCAACCGGGCCAGCGCCGCCGTGAGGACCCACGTGGCGGGTGAGCTCC
CACTCGGCCACTCGCCGGCGAGGTGGTGGCGTCCACTTCAGTC----AAACTCCGTGACCACGAATCGTCAACACAGCCG
GCAACCATGGCCGCATGCATGAATGTCCCGCTGCTTCTTCTCCTTCTCAAC-TTCTCATCATCACATCAACTGCTCGCCT
CCCTCT---------------CTGCGCCTTCGGGAGCCTCCCTTCTCCCTTCGGCCGCAACAAGACCA------------
------------ATGAAT---CCATTTCGTGTCCCGGCG------CCCGCCGGCGTGCTCTGCTCAGCCATACTACTGCT
GACTACCGTCCTTGCCACACACGCCACAAACACCACCACCTCG------------------ACGTTGTTGCCGTCGTCCT
CCTCCTCCTGCGGCCCGGTGATGTGCGGCGGCCTGCGCATCGAGTACCCGTTCTGGCTCGGCGGCACGC-----------
---GGCTACCGGGCCTTCCAGGTCACGTGCGACGGCAACGGCACGGCCTCCCTCAAGAACTCCATCTGGACGTACAAGAT
CCTGGACATCTCCTACGAGG------ACAGCTCGTTCCGGGTCACCAACGTCGAGCTCTCACACAGCACCTGCGACTCCG
AGCTCCAAGTCAACGTCTCCTCCGACCTCGGCCTCGCGCCCTTTAGCATCAGCGCCGCCAACCGGGAGCTCTTCTTCCTC
TACGACTGCATCGGCCTGCAGGCGGCGCAGCAGCCACCTACGTGGGCGCCCTTGAGCTGCGACAG---------------
---CAACTCGTTCGCGTGGCTTGCCGGGGGTTACAAGCTCGACGACAAATGGCCGCTGGTGCCGGGAAACTGCTCGGTGT
CGATGATGGCGCCGGTGATGGGGGTACCCCGGGGCGACCGCGGCTAACTACCACAAGCTGATGGAGCGCGGGTTTCGTCT
CGAGTACACGGCCGGCGAGTGCACAGCGTGCAGGGACACCGGTGGGCTTTGCCGGATCAACCCCACCTACGACATCTTCG
ATTGACAATGTCCCAGCGGCATGTCTGAC---------------------------------------------------
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>chr7D_1028
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------------------------------------GCG------GCCGCCGCCGTGCTCTGCTCAGCCACACTGCTGCT
AACTGCCGTCCTGGCCACCCACGCCCAAAACACCACCATGACGACGTTGCCGTCATCGTCCAC-----------------
----CTCCTGCGACCCGGCGATGTGTGGGGGCCTGCGCATCAAGTACCCGTTCTGGCTCGGCGGCACGCACCCGCCGGTC
TGCGGCTACCGCGCCTTCCAGGTCACGTGCGACCGCAACGGCACGGCCTCTCTCCGGAACTCCATCTGGACGTACCAGAT
CACGGAGATCTCTTACGGCAACGACAGCGGCACTTTCCGGGTCGCCAACACCGATCTCTCCGACGGCAGCTGCGACATCA
TACTCAAAGTGAACGCCTCCTCCGACCTCGGCTACGCACCCTTCGGCATCAGCGGCACCAACCAGAAGCTCTTCTTCCTC
TACAACTGCACCGACCTTGAGGCGCAGCCGCTGCCGCTTGCTTGGGCGCCCGTTAACTGCACGAATGCCAACGCGTCCAT
ATTCAACTCGTTCGCGTTGCTCGCCGGCGGGGACAAGCCCGACAACAAATGGGAGCCGATACCGGGGAGCTGCACTGTGT
CGATGATGCCGGTGCT----GGGGTACCCTGGGGCGACCGGGGCGGACTACCGGCGGCTGATGAACAGCGGGTTTCTTGT
CGAGTACACGGCCGACGACTGCAGGGCGTGCGAGGAGAGTGGAGGGTTTTGCCGGATTAACACCACCTACGATATCTTCG
AGTGCCGCTGCTCTGACGGCATGTCTGACTCCATCATCTG----------------------------------------
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>chr3B_1112
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-----TCCTGCGACCCGGCGATGTGTGGGGGCCTGCGCATCGAGTACCCGTTCTGGCTCGGCGGCACGCACCCGCCAGAG
TGCGGCTACCGCGCCTTCCAGGTCACGTGCGACCGCAACGGCACAGCCTCCCTCAGGAACTCCTTCTGGACGAACCAGAT
CCTGGAGATCAATTACGGAGACAACAACGGCACCTTCCGGATCACCAACGCCCAGCTCGCCGACGGCACCTGCGACATCG
AGCTCCGCGTGAACGCCTCCTCCGACCTCAGCCTCGCGCCCTTCACCATCAGCGCTGCCAACCAGGCGATCTTCTTCCTC
TACAACTGCACAGACCTGCAGGCACAGCCGCCGCCGCTTGCTTGGGCGCCCATTAACTGCACGAATGCCAACACGTCCAC
ATTCAACTCGTTCGCGTTGCTCGCCGGCGGGTACAAGCCCGACGACAAATGGGAGCCGGTGCCGGGGAGCTGTACTGTGT
CGATGATGCCCGTGCT----GGGGTACCCTGGGGCGACCGGGGCGGACTACCGGCGGCTGATGAAGAGCGGGTTTCTTCT
CGAGTACACGGCTGACGATTGCAGGGCGTGCGAGGAGAGTGGAGGGCTTTGCCGGATTAACACCACCTACGATATCTTCG
GGTGCCTCTGCTCTGACGGCCTGTCTGACCTCATCATCTG----------------------------------------
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------------
>SNPs
------------------------S-------------S-------S-------------------SSSSSSSSSSSSSS
SSSSSSSSS-----------SSSS------------------------------------------S-------------
---------------------------------------------------------S-S---------------S----
-SSS--SS-SS-----------------------------------------------S---------------------
-------------------------------------------------S---S--------------------------
---------S-------------------------------S-------------S------------------------
--S-----------------------------------------------------------------------------
---------S------------S---S-----SS--------SS-SSSSSS----------------------S------
--S-----------------------------------------------------------------------------
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-----------------------------------S---S----------------------------------------
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-----------------------------------------------------------------------S--------
-----S------------S-------------------------------------------------------------
--------------------------S--S--S--SS------S------------------------------------
-----------------------------------------------------------------S--------------
---------------------------------------------------S----SS---------S------------
---------SSSSSSSSSSSS--S--------------------------------------SS----------------
-----------------------------S---------SS---------------------------------------
-------------------------------------------S------------------------------------
------------------------------------------------------------S-------------------
----------------S---------------------------------------------------------------
----------------------------------------------------------S---------------------
----S---------------S-------------------S---------------------------------------
--------------------------------------S------------------------------S---S------
----------------------------------------------------------S---------------------
----------S-------------------S----------------------------------------S--------
-------------------------------------------------------------------------SS---S-
--------------------------------------------------------------------------------
---S---S---------------SS---------------------------------------------SSSSSS----
------------------------S-S--------S-S--------------------SS-S------S-----------
S------------------S-SSSSS----S-S-----------------------------------------------
----------------------------------------------------------S-S-------------------
--------------------------S---S------SS-S---------S-SSSSSSSS-SSSSS-SSSSSSS-SS--S
SSSSSSSSSSSSSSSSSSSSS---S---------S-S--S----------SSSS--------------------------
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---------------------------SS---S---------------------S---S----S----------------
-----S-----S-SS---------------------------------------------S------------S------
----S------S------------S----------------------------------S----S---SSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSS
>forward_3898
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--------------------------------------TCCCGGTGCTTTCCTTCTTC----------------------
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------------
>reverse_5674
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-------------------------------------------------------------------------ATGTCAT
GGGTCAAGGCAGG-------------------------------------------------------------------
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------------
