>input_sequence_67397
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-------------CTATATAAGTCCGCCCGCCCTTTCCTCCCCCCAATCTAGCCCGCACACG-----CCACGCCACACCC
ACACGTGAGCTAAG---CAAAAGCAAG----------------ACCACCATC----AAAGAT-CGGCCATGGGTCGGTCG
CCGTGCTGCGAGAAGGCGCACACCAACAAGGGCGCGTGGACGAGGGAGGAGGACGAGCGGCTGGTGGCCCACGTCCGGGC
GCACGGGGAGGGCTGCTGGCGCTCGCTGCCCGGCGCCGCCGGCCTGCTGCGCTGCGGCAAGAGCTGCCGCCTCAGGTGGA
TCAACTACCTCCGCCCCGACCTCAAGCGCGGCAACTTCACCCGCGACGAGGACGACCTCATCGTCAAGCTCCACAGCCTG
CTCGGCAACAAGTGGTCGCTCATCGCCGCGCGCCTCCCCGGGAGGACGGACAACGAGATCAAGAACTACTGGAACACGCA
CATCCGGAGGAAGCTGCTGGGCAGGGGGATCGACCCCGTCACGCACCGCCCCCTCACCCACGCCGCCAGCGCCACCACCG
TCTCCTTCCTCCATCCTGCGGAGCCGCCCAA---GACGCAGCCGGCGACGGAGTTGAGTAAGCCGCCCAGGTGCCCGGAC
CTCAACCTGGACCTCTGCATCAGCCTGCCCTTCCAACAGGAGGAGGAACGGCCGCCGGCGAGAGCGTGCGCCAAGCCGGT
GAAGATGGAGCAGCTGCAGCAGGGCGGCGGCGGCCTCTGCTTCCGCTGCAGCATCCTGAGAGTGAGAGGGGCGGCGACGG
AGTGCAGCTGCGGCAGCAACTTCCTGGGCCTCAGGGCCGGCATGCTCGACTTCAGAGGCCTCCGGATGAAATAGATGAAA
CTTAGGA-------------------------------------------------------------------------
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>chr7A_1_TraesCS7A01G272100
TTGTGGAGGGTGAGCTCTATGGAGGCCTCCAAACGCAAAATTCAAAATTCGTAAAAACCCATATTTTTACATTTCAAAAA
ATTCTGAAAAAAACAAAGATAGATGAAGGCATAGTGCACAAGTGTGTAAATTTTCGGGACAAAATACGTTCAAATGAGGG
CTGTGCAAAAAAAGACAAATTTGGAGTTTTTGAACACATGATACTGTTAATCCCCCAGAACACAAATTTATCTTTTTTGT
ACGGATCGCATTTCGATGTATTTCATCCTAAAATTTTACATACATACGCCTCACATCCTTGTTTATTTGTACCAAAAAAA
ATCAATTTTTTTCAAAAATGAAAATTTTGAAATTTGATTTTTTCAAAAAAATAGGCCTCCATGTAGGCCGAGAGCCAAAA
CGCCATTCTCACTTTAAGAGGCCAAATTATAAGGCCAATCTACGTTAAAAGACACCCAAGTTCGATGATAGTGGTAAGAT
TCAAATGAGGAAGAAGAAACTAT---------------------------------------------------------
--------------------------------------------------------CTGGATATTATTTGAGGACACGGT
GGCGGGAGAATC---GAGGGCGGGGGGCACGCAAATTGGGTTTGTGGATGCAGGCAACAAGGCAAAGTAGGCAGCCCATA
CCCATCACCGCCCGGCCGCCACATGTGTCAGCACCGCACACGCCGACGCCGACGCCACCGTTCACCGTTACGCACTCTCC
AGCAGCCTACCTTCCCCTTTAGTATACTAGTAGTAGTATAGTATAGATAGATAGAGTAACAGGGGTGCTTTCGCTTTGTA
CCTACCTCCTCTGCCGCCTTGCGTTGCATGCTCGCTCGCGCTCGGGCCGGCGTGGCA------------CGGCGAGAAAA
ATCCACTCGGCCCGGTCCGGTCGTGTCATGCCGTCACCCTAACCACCTCGACTCCCCTTCCACCAAACCAACCAACTCAT
CATCATC--CATCATCCTCTCTCCCTCTCTTTCTCTCCCGCGCGCGCCTACCTTCCCTTCC---CAAGAGAGCAAGCAGA
TGAGAGGGGCCGTCTATATAAGTCCGCCCGCCCTTTCCTCCCCCCAATCTAGCCCGCACACG-----CCACGCCACACCC
ACACGTGAGCTAAG---CAAAAGCAAG----------------ACCACCATC----AAAGAT-CGGCCATGGGTCGGTCG
CCGTGCTGCGAGAAGGCGCACACCAACAAGGGCGCGTGGACGAGGGAGGAGGACGAGCGGCTGGTGGCCCACGTCCGGGC
GCACGGGGAGGGCTGCTGGCGCTCGCTGCCCGGCGCCGCCGGCCTGCTGCGCTGCGGCAAGAGCTGCCGCCTCAGGTGGA
TCAACTACCTCCGCCCCGACCTCAAGCGCGGCAACTTCACCCGCGACGAGGACGACCTCATCGTCAAGCTCCACAGCCTG
CTCGGCAACAAGTGGTCGCTCATCGCCGCGCGCCTCCCCGGGAGGACGGACAACGAGATCAAGAACTACTGGAACACGCA
CATCCGGAGGAAGCTGCTGGGCAGGGGGATCGACCCCGTCACGCACCGCCCCCTCACCCACGCCGCCAGCGCCACCACCG
TCTCCTTCCTCCATCCTGCGGAGCCGCCCAA---GACGCAGCCGGCGACGGAGTTGAGTAAGCCGCCCAGGTGCCCGGAC
CTCAACCTGGACCTCTGCATCAGCCTGCCCTTCCAACAGGAGGAGGAACGGCCGCCGGCGAGAGCGTGCGCCAAGCCGGT
GAAGATGGAGCAGCTGCAGCAGGGCGGCGGCGGCCTCTGCTTCCGCTGCAGCATCCTGAGAGTGAGAGGGGCGGCGACGG
AGTGCAGCTGCGGCAGCAACTTCCTGGGCCTCAGGGCCGGCATGCTCGACTTCAGAGGCCTCCGGATGAAATAGATGAAA
CTTAGGAATAATTATTCCATCAAACTTTCTGCCTGCTGTAAATTGTTGCTCCCTTCTACTACCAAGTTTTTATTTAGCTT
TTAGGAAAAGAAATACT---ACTACTACAGTAGATGGTGAGGAGGAGACTA-----GTATTATTAGGTGAGGATTTGTAG
CCAGATCCTCCCTGCCCTCCTCGGTCTGCTCAGTTTCATGTAAATTATTACTACTGCTCCACCGATGAAATGGAATGGAA
CGGAATGAAATAA-----TA-GATACTAAATTCAGTGCGTTTCCCATGGTCTCATGTCCCTGTGAACATCTCCTCAAACT
TCCCTAGAAGAGAAGTGGCAAATGAAACACGTCCCAAACAAGAATATGAAAATGAGTACTAGACCTTGTCGTTAGTTCTC
AC------------TTCTAAAATAGAGCAGTTTTAACATGG---------------------TTCCAGTTCAAGATGTTC
TTGTGTTAGAGAGTCCGTTGTGCTGGTGGTG-----CAGATTGGTTGGAGCCACCAAGTTTGGTAGGTAGAGCTGTTTTG
CGCGGGCTGTTGCTTTCGTACGTCTTGCCCTGTTCTCTTCTGTTCTGTTTTGGGTA-GGGCGGCAGCAAGTTGAGATGCC
GCCCGCTGCAAAGGAAAGCAGCGGCCATCCCTCGTTTGGTCGTTGTTGGATCGGATCGGATTGGATTGGGGTTGGGGGCG
CCGCTTTGTGTTGTGTTGTGTTGTGTTGGTGCACTCCTGTCCTTGCTAGATTCT---------TTTGGGTTGCTTCGGAG
CCCGGACCAGTCTGAAAAGACTAACAAAAAGGCTGAATTTCCCCTTTTTTTTTCTTTTTACAACGAAAATGGAACCTGTT
TTCCTAGATATATATAAACAGGGAGAAATGGACCGATTTCTTAGCATATACTACTGTATTTTGATTAAAATATTATCTCC
TCC---ATCTGGGGCGCCACAAATGGACTCCGAAATCCCTGCTCTCGGAAAAGTCAGTCGTCAGTGGACGAGGATTATCG
GCCGTGGAAGGTGCAGACCGCCTGTGCACCAG
>chr7B_431
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------------------------------AAGGCCAATCTTCGTTGAAGGACACTTAAGTTCAA------TGGTAAGAT
TCAAATGAGGAAGAAGAAACTATATAATCCAAGTTTAAAAAAATCTACCCTACATTACATTGTGATAGGAAGGGAGTAGG
AACCATGTTCTAGCAAACTAGAGAAAGGAAGAAATATCATTTGAGTTCCTCCCTATCTGGA---TATTT--GGACACGGT
GGCGGCGGGAAAATGGAGGGCGAGGGGCACCCAAATTGGGTTTGTGGATGCAGG---CAAGGCAAAGTAGGCAGGCCATA
CCCATCACCGCCCGGCCGCCACATGTGTCAGCACCGCACACGCCGACGCC------ACCGTTCACCGTTACGCACTCTCC
AGCAGCCTACCTCCCCTATAGAGTATCGTA---TAGCATAGTATAGATAGATAGAGTAACA--GGTGCTTTCGCTTTGTA
CCTACCTCCTCTGCCGCCTTGC-----ATGCTCGCTCGCGCTCGGGCCGGCGTGGCAGCCGGTCGCGCACGGCCAGAAAA
ATCCACGAGGCCCGGTCCGGTCGTGTCATGCCGTCACCCTAACCACCTCGACTCCCCTTCCAACAAACCAACCAACTCAT
CATCATC---ATCATCCTCTCTTTCTCTC--CCG----CTCGCGCGCCTACCTTCCCTTCCTCCCAAGAGAGCAAGC---
--AGAGGAGCCGCCTATATAAATCCGCCCGCCCTTTCCTCCCCCCAATCTAGCCCGCACACGCTACGCCACGCCACACCA
ACACGTGAGCTAAGAAGCAAAAGCAAGGCGGATATACGTTTACACCACCATCAAAGAGCTTAGCGGCCATGGGTCGGTCG
CCGTGCTGCGAGAAGGCGCACACCAACAAGGGCGCGTGGACGAGGGAGGAGGACGAGAGGCTGGTGGCCCACGTCCGGGC
GCACGGGGAGGGCTGCTGGCGCTCGCTGCCCAGCGCCGCCGGCCTGCTGCGCTGCGGCAAGAGCTGCCGCCTCAGGTGGA
TCAACTACCTCCGCCCCGATCTCAAGCGCGGCAACTTCAGCCGCGACGAGGACGAGCTCATCGTCAAGCTCCACAGCCTC
CTCGGCAACAAGTGGTCGCTCATCGCCGCGCGCCTCCCCGGGAGGACCGACAACGAGATCAAGAACTACTGGAACACGCA
CATCCGGAGGAAGCTGCTGGGCAGGGGGATCGACCCCGTCACGCACCGCCCCCTCACCGA---------CGCCACCACCG
TCTCCTTCGTCCATCCTGCAGAGGCGCCAAAGACG---CAGCCGGTGACGGAGGAGAGGAAGCCGCCCAGGTGCCCGGAC
CTCAACCTGGACCTCTGCATCAGCTTGCCGTTCCAACAGGAGGAGGAACGGCCGCCGGCGAGAGCATGCGCCAAGCCGGT
GAAGATGGAGCAGCTGCAGCAGGGCC------GCCTCTGCTTCCGCTGCAGCATCCTGAGAGTGAGAGGAGCGGCGACGG
AGTGCAGCTGCGGCAGCAACTTCCTGGGCCTCAGGGCCGGCATGCTCGACTTCAGAGGCCTCGAGATGAAATAGA---AA
TTTGGGAATAATTATTCGATCAAACTTT----CTGCTGTAAATTGTTGCTCCCTC---CTACCACGTTTTTATTTACTTC
TTAGGAAAAGAAATACT---ACAGTACTGGTAGATGGCGAGGAGGAGACTA-----GTATTATTAGGTGAGGATTTGTAG
CCAGATCCTCCCTGCCCTCCCCGATTTGCTCAGTTTCATGTAAATTATTACTGCTCCACTG--------ATGAAATGGAA
CGGAATGAAATAATACACTA-GATACTAAATTCAGTGCGTTTCCCATGGTCTCATGTC--TGTGTGAACAT-CTCAAACT
TCCCGAGAAGAGAAGTGGCAACTGAAACACGTCCCAAGCAAGTGTATG-AAATGAGTACTAGGTCTTGTCATTAGTTTGT
TACTACTCGCTCCGTTCTAAAATAAGTGTCGTAGTTTCAGTTAGACCGTGCTGGTGGGATTCTTCAATTTCAAGATGTTC
TTGTGCTGGAGAGTCCGTTGTGCTGGTGGTGCAGAACAGATTGGTTGGAGCGGGCAAGT----TAGGTAGAGCTGTTTTG
CGCGGGCTGTTGCTTTCGTACGTCTTGCC-----CTCTTCTCTTCTGTTTTGGGTAGGGGCGGCAGCAAGTTGAGATGCC
GCCCGCTGCAAAGGGAATCAGCGGCCATCCCCCGTTTGGTTGTTGTTGGATTGGATCGGATTGGATTGGGGTTGGAGGCG
CCGCTTTGTGTT----------GTGTTGGTGCACTCCTGTCTTCGCTAGATTCTATCGCCGCTTTTGGGTTGCTTTGGAG
TCCGGACCAGTCTGAAAAGACTAACCAAAAGGCTGAATTTCCTTTT--TTTTTCTTTTACCAACAAAAATGGACCTGTTT
TT-CTAG--ATACATAAACTGGGAGAAATCGGCCGATTTCTTAGCAT---------------------------------
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>chr7D_500
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-------------------CTAT---------------------------------------------------------
--------------------------------------------------------CTGGA---TATTTCAGGACACGGT
GGCGGGAAAACC---TAGGGCGAGGGGCACGCAAATTGGGTTTGTGGATGCAGG---CAAGGCAAAGTAGGCAGGCCATA
CCCATCACCGCCCG-----------------CACCGCACACGCCGACGCCAACGCCACCGTTCACCGTTACGCACTCTCC
AGCAGCCTACCTTCCCCTTTAGTT---------TAGTATAGTATAGATAGATAGAGTAACA--GGTGCTTTCGCTTTGTA
CCTACTTCCTCTGCCGCCTTGC-----ATGCTCGCTCGCGCTCGGGCTGGCGTGGCAGGCGGTCGCGCACGGCGAGAAAA
ATCCACGAGGCCCGGTCCGGTCGTGTCATGCCGTCACCCTAACCACCTCGACTCCCCTTCCACCAAACCAACCAACTCAT
CATCATCATCATCATCCTCTCTTTCTCTCTCCCG----CGCGCGCGCCTACCTTCCCTTCC---CAAGAGAGCAAGCAGA
GGAGAGGAGCCGCCTATATAAATCCGCCCGCCCTTTCCTCCGCCCAATCTAGCCCGCACACGCG-----ACGCCACACCC
ACACGTGAGCCAAG---CAAAAGCAAGGCGGACAGACGTTCACACCACCATCAAAGAAAGAT-CGGCCATGGGGAGATCG
CCGTGCTGCGAGAAGGCGCACACCAACAAGGGCGCGTGGACGAGGGAGGAGGACGAGCGGCTGGTGGCCCACGTCCGGGC
GCACGGGGAGGGCTGCTGGCGCTCGCTGCCCAGCGCCGCCGGCCTGCTGCGCTGCGGCAAGAGCTGCCGCCTCAGGTGGA
TCAACTACCTCCGCCCCGACCTCAAGCGCGGCAACTTCAGCCGCGACGAGGACGAGCTCATCGTCAAGCTCCATAGCCTC
CTCGGCAACAAGTGGTCGCTCATCGCCGCGCGCCTGCCCGGGAGGACGGACAACGAGATCAAGAACTACTGGAACACGCA
CATCCGGAGGAAGCTGCTGGGCAGGGGGATCGACCCGGTCACGCACCGCCCCCTCACCGA---------CGCCGCCACCG
TCTCCTTCGTCCATCCTGCAGAGGCGACCAA---G---CAACAGGCGACGGAGGAGAGGAAGCCGCCCAGATGCCCGGAC
CTCAACCTGGACCTCTGCATCAGCCTGCCGTTCCAACAGGAGGAGGAACGGCCGCCGGCGAGAGCGTGCGCCAAGCCGGT
GAAGATGGAGCAGCTGCAGCAGGGCGGCA------TCTGCTTCCGCTGCAGCATCCTCAGAGTGAGAGGAGCGGCGACGG
AGTGCAGCTGCGGCAGCAACTTCCTGGGCCTCAGGGCCGGCATGCTCGACTTCAGAGGCCTCGAGATGAAATAGA---AA
TTTGGGAATAATTATTCGATCAAACTTT----CTGCTGTAAATTGTTGCTCCCTC---CTACCAAGTTTTTATTTAGCTC
TTAGGAAAAGAAATACTCCTACAGTACTAGTAGATGGTGAGGAGGAGACTGGTATGGTATTATTAGGTGAGGATTTGTAG
CGATATCCTCCCTGCCCTCCTCGATCTGCTCAGTTTCTTGTAAATTATTACTGCTCCACTG--------ATGAAATGGAA
CGGAATGAAATAATACAGTACGATACTTAATTCAGTGCGTTTCCCATGGTCTCATGTC--TGTGAACATCTCCTCAAACT
TCCCAAGAAGAGAAGTGGCAACTGAAACACGTCCCAAGCAAGAGTATG-AAATGAGTACTAGGGCTTGTCATTAGTTCGT
TACTACTCGCTCTGTTCTAAAGTAAGTGTCGTAGTTTCAGTTAGACGGTGCTCGTGGGATTCTTCAATTTCAAGATGTTC
TTGTGCTGGAGAGTCCGTTGTGCTGGTGGTG-----CAGATTGGTTGGAGCTGGCAAGT----TAGGTAGAGCTGTTTTG
CGCGGGCTGTTGCTTTCGTACGTCTTGCC-----CTCTTCTGTTCTGTTTTGGGTA-GGGCGGCAGCGAGTTGAGATGCC
GCCCGCTGCAAAGGAAAGCAGCGGCCATCCCCCGTTTGGTTGTTGTTGGATTGGATCGGATTGTATTGGGGTTGGAGGCG
CCGCTTTGTGTT----------GTGTTGGTGCATTCCTGTCCTTGCTAGATTCTATCGCCGCTTTTGGGTTGCTTCGGAG
TCTGGACCGGTCTGAAAAGACTAACCAAAAGGCTGAATTTCCTCTT--CTTTTTTTTTACCAACGAAAATGGACCTATTT
TTTCTAG--ATATATAAACAGGGAGAAATGGGCCGATTCCTTAGCATA--------TATTTTGATTAAAATATCATCTCC
TCCTCCATCAGGGGCGCCACAAATGGACTCTGAAATTCCCGCTCTCAGAAAAGTCAGTCGTCAGTGGACGAGGATTATCG
GCCGTGGAAGGTGCAGATCGCCTGTGCACCA-
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------S----S--S-----SS------S-SSSSSS---------
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-------------------------------------------------------------SSS-----S----------
----------S-----------S-------------------------------SSS-----------------S-----
--------------------------------------------------S-----------------------------
-----------------------SSS-SSSSSS----------------------------SS-----------------
----------------------SSSSS-----------------------------------------------------
------SS------------------------------------------------------------------------
----------------------SS------SS-SSSSS------------------------------------------
S------S----S--------S----------------------------------------------------------
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-------------------------------S------------------------------------------------
---------------------------------------S---------------S-----------------------S
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----------------------------------------------------------S-SSSSSSSSS-----------
--------S----------S---S-----------SSS---------------SS---S---------------------
-----------------------------S--------------------------------------------------
----------------------------SSSS-------------------------------------S----------
--------------------------------------------------------------SS-----------SSS--
S--S-------------S----------SSSS----------------------SSSS---------------------S
----------------------SSSSSS----------------------------------------------------
-----------------------S----------------------------S--S-S-SSSSSSSSSS---S-------
----------------------------------------------------------SS--------------------
----S----------------S---------------S-----S----S-------------SS------S-------SS
SS----------------------SSSSSSS-SSSSSSS-S------------------------S-S------------
-----S-S-------------------------------------------SSS-----SSSS-----------------
-----------------------------SSSSS----------------------------------------------
-------------------------------S--------S----------S-----------------------S----
------------SSSSSSSSSS----------------------------------------------------------
S------------------------S----------------S---SS----------SS-------------S-SSS--
--S----SS----------------------S----------------SSSSSSSS-----------------S------
---------S--------------------S-----S--S------S---------------------------------
-----------------S-------------S
>forward_166
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------------------------------------------------------------------CGTTCAAATGAGGG
CTGTGC--------------------------------------------------------------------------
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>reverse_1496
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-------------------------------------------------------CCTCATCGTCAAGCTCCACA-----
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>forward_408
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--------------------------------------------------------------------CGAGAGCCAAAA
CGCCATTC------------------------------------------------------------------------
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>reverse_2488
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-------AGAGAGTCCGTTGTGCTGGT-----------------------------------------------------
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