>input_sequence_67297
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------ATGGCCGT
GGGCGCGGCGAGCAGGCGGTACATCGGGCCCCTGCTGTGCATCAACCTCGTCATGCACGCGGCCGTCCTCGGCATCGCCG
GCTGGTCGCTCAACAAGTTCATCGACCGCGAGACGCACCGCCGTACGTA--------------------------CTACG
TCCTTGTGTGCGACATGATCGATCTGGTCTGGTTAACGACGTGAGTGACGCGGTGTGCAGATCTAGGAGGCAACACGGCG
ACGGGGTACCTGCTCGTCTTCTCGCTCATGGCCGGGGTGGTCGGCGCCTGCTCGGTGCTTCCCGCCCTACTCCACGTCAG
GGCGCCCTGGCACAGCGAGAGCCTCGCCGCCGCCGCCTCCACCGGGCTCGTCTCCTGGGCGCTCACCGCCCTCGCCTTCG
GGTTCTGCCCT------ACACTCGCACCGCCAGTAATGTAATCA------------CTCGCCATCTGCTAGTACGTA---
GTAACTCACAGTGCTGTGCCATCTTTCCTTGAACATCTGCAGCCTCGCGTGCAAGCACATCACTCTAGGGAACCGAGGAA
GGCGCCTGGTACGTCGTCAGC---CAATGCTAGTTCTGCACGCACCGGTGCATCTATCCTTGTATATTA-CTGCTTTTCC
TCTCGGTGGTTCTAGTTATGAATTATGTGCTCGTCTTGCTAGCAGAGGACGTTGGAGGCGTTCATCACGATCTCGACGCT
GACGCAGCTCTTCTACCTGCTTCTGCTCCACGCCGGCGCCTTGAGCAGCGTGCATGGAGTTGGACAGGCCTGCGGGAACC
ACGGCGAAGCCTGCTGCCGCGAGATCCCTCGGGGAGAGCTCGCCGCGGACCATAAGACGGCGGGAGGGGTTCCGTCCCCG
GATGCATGA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>chr6D_1_TraesCS6D01G273800
TCAAGCCGATCAGCTCGCCGTTCTACGTACTCCCCGAATACGCATTAGCGCCTCCTGTTCTGAAAGTACCTTGGCTTTCA
GGTCGTCGACGAGCTCGTCGCCGCTCGCGGCAGAGGTGTCATCGGAGGAGGCCTTCGCCCGGAGCAGAGAGAGCCGCGGT
GTATCTGGTTAAAAACATCGTGCTAATTGTTAAGGCGTCTACGTATCTGGGCATCGCCATTGCGGAATGAATGTAGCACG
CAGTATAGGTACCGTGCGCACCTTGGAGGCCAAGAGGGGAGAAGTTACGCCGTGGGAGGAGAACGGACCGCGGCGCGGCG
GCGGCGCGGACGGGGAGGCGCGCTCCTGCTCCACCCAGAAGCGCCGTAGAGCACGCCGTTGTGGCCATGTTCTCACCTGC
AAGCTCTTCTCTGGCTCTGGC-TATGCTGACACGCTCCTTAGTCCTGTGCGTCCCTGGGCCTCTCTTTCTCCTTGTGTCC
CGGGCCGA----ATTTGATTTGATGCTTTTGCGCGGTGATCGGCCACATGGCAGGATGGTGGGCTCTGATTGGCCGGCTG
CCTATCTTAGAAATCTGTGGCTGGCCCCCAGCGTTTGGTTGGCTGTCCTAGGAACAGAGGTCTCAGCTCACAGCTCCGTA
GTCCATACCAGACCACCACATTGTCCCGTAGGAGTACATCGGTGGGCTTACCTCGTCCATGCAAGCTGCAACGGCGGCCG
GCAGTCGCCCTCCGAAGCTGGCCCATGTTACTATGTACGCG-TGCCTTTGCGTGGCACACGGTTCTAGCGCGGGGCCCGT
CCTCCATGCTAGCTTCGCGTGCACAACAGCATTGCCGTTGCACGAAACTTCTAGTGCGCGTCATCACAAACGGCCCCGGC
CCCTCGGCTGGACGCTCGAACACTTCCAGTAG-------TAGTTACATAGCGACCAGAGTCACCAGATCAATTG-----T
GCACACACTCGAGACCGACGG--------------TAGCATTCGCGGCCGGGGAGCTAGCAGTAGTGGATCCATGGCCGT
GGGCGCGGCGAGCAGGCGGTACATCGGGCCCCTGCTGTGCATCAACCTCGTCATGCACGCGGCCGTCCTCGGCATCGCCG
GCTGGTCGCTCAACAAGTTCATCGACCGCGAGACGCACCGCCGTACGTA--------------------------CTACG
TCCTTGTGTGCGACATGATCGATCTGGTCTGGTTAACGACGTGAGTGACGCGGTGTGCAGATCTAGGAGGCAACACGGCG
ACGGGGTACCTGCTCGTCTTCTCGCTCATGGCCGGGGTGGTCGGCGCCTGCTCGGTGCTTCCCGCCCTACTCCACGTCAG
GGCGCCCTGGCACAGCGAGAGCCTCGCCGCCGCCGCCTCCACCGGGCTCGTCTCCTGGGCGCTCACCGCCCTCGCCTTCG
GGTTCTGCCCT------ACACTCGCACCGCCAGTAATGTAATCA------------CTCGCCATCTGCTAGTACGTA---
GTAACTCACAGTGCTGTGCCATCTTTCCTTGAACATCTGCAGCCTCGCGTGCAAGCACATCACTCTAGGGAACCGAGGAA
GGCGCCTGGTACGTCGTCAGC---CAATGCTAGTTCTGCACGCACCGGTGCATCTATCCTTGTATATTA-CTGCTTTTCC
TCTCGGTGGTTCTAGTTATGAATTATGTGCTCGTCTTGCTAGCAGAGGACGTTGGAGGCGTTCATCACGATCTCGACGCT
GACGCAGCTCTTCTACCTGCTTCTGCTCCACGCCGGCGCCTTGAGCAGCGTGCATGGAGTTGGACAGGCCTGCGGGAACC
ACGGCGAAGCCTGCTGCCGCGAGATCCCTCGGGGAGAGCTCGCCGCGGACCATAAGACGGCGGGAGGGGTTCCGTCCCCG
GATGCATGACCAAA---ACTACCGGGAACTCGAATTGTACTGAGTGCCAACAACTGTATCGGGTGCAGTTCATCGGGCAC
TCGGTATAGTGAGCAATTTACCAAGCGCGGGATGACACGCTCGTG--------TATTTCCGTAGGCACTTGGTAGACAAA
TAACACTCAGGACAATAGGGATACATGCCATCTGAGAC-CAGATGATGGAAATACAGACGGACTTTTTATCT-ACCAAGT
GGTTTAAATCTTAAGTGTTCGAAAAATAAACACTCGGTCCTCGATATAGTTTTTAGATCATGAGGCATTACCCTCCACAG
CGCCGCACGAGCCATCAAACGTCATGTCGGACAACCATGTTTCTCGCATCAACCTTGAATCCATGTAAACTAAGAGAATG
CCCGTGCGTTTGTACGGGCAAAAGCCGGATGATCATACATTGCCATGAAATAATAGAAATATGCACATTTATCATATTGT
TATTTTAATTCAGAAATACA-TGTTAAGCATGATGGCATATGGTTTCATCAAATAGTGACAAATTAAAACTCTCTTCGGC
TTCTTTCTTTCTCGGCAGTCTTGGTGTCTCCTAAACCAGAAAACCGCTCGCCACG------------TATACCATCCA--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------TTATTAAATAGTATCAATATCACTCAA-TTCACACGTCCATGCATATC
ACTATTACAAGGTACACAAAAACTGACAATTCCTTGTAATGAGCCTCTTAA-TTTGAGCAATAATAGCAC-AAAAAGAGA
GATCCAACTTCCGAGAGTGTTCTTTAACAATAGCATGTCCGTTCCATTCTTCATAGCAACAATCAGCCTGAAAAAA-CAC
TGTATATTGTTTAAGTTCATGTCCAATATTAGGCCCAAATTGTTAACTATGGCCATTGGTAAGTATATAAAGCAATAGGT
TTGTAGCCCA-TCTGGCATCGGTTTGTACTTAAAAAC---ATCTAAAACAAACTGAGAAAAGGTCCGCAGATAGGTACAA
AAGGAACCGATTGTCAC-AAAAATCAAGTAACTTTTGA
>chr6A_1
TCAAGCCGATCAGCTCGCCGTTCTACGTACTCCCCAAATACGTATTAGCGCCTCCTGTTCTGAGAGTACCTTGGCTTTCA
GGTCGTCGACGAGCTCGTCGCCGCTCGCGGCAGAGGTGTCACCGGAGGAGGCCTTCGCCCGGAGCAGAGAGAGCCGCGGC
GCATCTGGTT-AACACATCGTACTAATTGTTAAGGCGTCTACGTATCTGAGGTGACAAGATGA--------------ACG
CAGTATAGGTACCGTCCGCACCTTGGAGGCGACGAGGGGAGAAGTGACGCCGTGGGAGAAGAAAGGTTGGCGGCGCGCCG
GCGGGGAGGCGT---------GCTCCTGCTACACCCAGAAGCGCCGTAGAGCACGCCGTTGCGGCCATGTTCTCACCTGC
AAGCTCTTCTCTGGCTCTGGCCTACGCTGACACCCTCCT-AGTCCTGCGCGTCCCTGGGCCTCTCTTTCTCCTTGTGTCC
CGGGCGGA----ATTTGATTTGATGCTTTTGCGCGGTGATCGGCCACATGGCAGGATGGTGGGCTCTGATTGGCCGGCTG
CCTATCTTAGAAATCTGTGGCTGGCCCCCAGCGTTTGGTTGGCTGTCCTAGGTACAGAGGTCTCAGCTCACAGCTCCGTA
CTCCATACCAG---ACCACATTGTCCCGTAGGAGTACATCGGTGGGCTTACCTCGTCCATGCAAGCTGCAACGGCGGCCG
GCAGTCGCCGTCCGAAGCTGGCCCATGTTACTATGTACGCG-TGCCTTTGCGTGGCACACGGTTCTAGCGCGGGGCCCGT
CCTCCATGCTAGCTTCGCGTGCACAACAGCATTGCCGTTGCACGAAGCTTTTAGTTCGCGTCATCACAAACACACCCCGC
AATAAAAGATTCATTTCATGCTTGCAGCTCCACTGACACTAGTAACATAGCGACCAGAGTCACCGGATCAATTTGCAGTT
GCAGACACTCGAGACCTGCGGCCTAGGCTAGGTACTAGCATTCGTGGCCGGGGAGGTAGCAGTGGTGGATCCATGGCCGT
GGGCGCGGCGAGCAGGCGGTACATCGGGCCCCTGCTGTGCATCAACCTCGTCATGCACGCGGCCGTCCTCGGCATCGCCG
GCTGGTCGCTCAACAAGTTCATCGACCGCGAGACGCACCGCCGTACGTA--------------------------GTACG
TCCTTGCGTGCGACATGATCGATCTGGTCTGGTTAACGACGTGA----CGCGGTGTGCAGATCTAGGAGGCAACACGGCG
ACGGGGTACCTGCTCGTCTTCTCGCTCATGGCCGGGGTGGTCGGCGCCTGCTCGGTGCTCCCCGCCCTGCTCCACGTCAG
GGCGCCCTGGCGCAGCGAGAGCCTCGCCGCCGCCGCCTCCACCGTGCTCGTCTCCTGGGCGCTCACCGCCCTCGCCTTCG
GGTTCTCTTCT------ACACTCTCACCGCCAGTT------TCA------------CTCGCCATCTGCTAGTGATAGTAC
GTAACTCACACTGCCGTGCCATCTTTTCTTGAACATCTGCAGCCTCGCGTGCAAGCACATCACTCTAGGGAACCGAGGAA
GGCGCCTGGTACGTCGTCGTCAGTCAATGCTAGTTCTACACGCACCGGTGCATCTATCCTTGTAAATTTTCTGCGTTTCC
TCTCGGTGATTCTACTTCTGAACTCTGTGTTGGTCTTGCTAGCAGAGGACGTTGGAGGCGTTCATCACGATCTCGACGCT
GACGCAGCTCTTCTACCTGCTTCTGCTCCACGCCGGCGCCTTGAGCGGGGTGCATGGAGTTGGACAGGCCTGCGGGAGCC
ACGGCGAAGCCTGCTGCCGCGAGATCCCTCGGGGAGAGCTCGCCGCGGACCATAAGACGGCGGGAGGGGTTCCGTCCCCG
GATGCATGACCAAGCGTACTACCAGAAACTTGAATTGTACTGAGTGTCAACAACTGTATCGAGTGCAGTTCATCGGCCAC
TCG-TATGGTAAGCAATTTGCCAGGCGCAGGATGACGTACTCGGATTTCTGATTATTTCCGTAGGCCCTTGGTAGAGAAA
TAACACTCAGGACAATAGGGATACATGTCATCTGAGACGCAGATGATGGAAATACAGACGGACTTTATCTACCACAAAGT
GGTTTGATCTTAT-GTGTTCGAAAAATAAACACTCGATCCTCGATATAGTTTTTAGAGCGTGACGTTGGCAAATCCGGCG
CCGAATGAT--CCATCAAACATCATGTCGGACAATCACGCTTCTCGCATCA-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------AAACCCT---
TGCAAATCCATG--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>chr6B_1
TCAAGCTGGTCAGCTCGCCGTTCTACCTAGCTTACCAAAGGTC----GCGCCTCCTGTTTCGAGAGTACCTTGGCTTTCA
GGTCGTCGACGAGCTCGTCGCCGCTCGCGGCAGAGGTGTCATCGGAGGCGGCCTTCGCCGGGAGCAGAGAGAGCCGCGGT
GCATCTGGTT-AACAGATCGTACTAATTGTTAATGTGTCTACTTATCTGGGCATCGCCATTGCG----GAATGTAGTACG
CAGTATAGGTACCGTGCGCGCCTTGGAGGCGAAGAGGGGAGAAGTTACGCCGTGGGAGAAGAACGGTTGGCGGCGCGCCG
GCGGGGAGGCGT---------GCTCCTGCTACACCCAGAAGCGCCGTAGAGCACGCCGTTGCGGCCATGTTCTCACCTGC
AAGCTCTTCTCTGGCTCTCGCCTATGCTGACACGCTTCT-AGTCCTGTGCGTCCCTGGGCCTCTCTTTCTTCTTGTGTCC
CAGACTCTAATCATTTGATTTGATGCTTTTGCGCGCTGATCGGCCACATGGCAGGATGGTGGGCTCTGATTGGCTGGCTG
CCTATCTTAGAAATCTGTGGCTGCCCCCACTGTC-TGGTTGGCTGTCCTAGGAACAGAGGTCTCAGCTCACAGCACCATA
CTCCATACCAG---ACCACATTGTCCCGTAGGAGTACATCGGTGGGCT---------------------------GGCCG
GCAGTCGCCGTCCGAAGCTGGCCCATGTTACTATGTAGTACCTGCCTTTGCGTGCAGACGGTACAAGCGGAC---CCCGT
CCTCCAGGCTAGCTTCGCGTGCACAACAGCATTGCCGTTGCACGAAACTTCTAGTGCGCGTCATCACAAACGGCC----C
CCCTCGGCTGGACGCTCGAACACTTCCAGTAG-------TAGTTACATAGCGACCAGAGTCACCAAATCAATTGCC----
---CACACTCGAGACCTGCGGCCTAGGCTAGGTACTAGCATTCCTGGCCGGGGAGCTAGCAGTGGTGGATCCATGGCCGT
GGGCGCGGCGAGCAGGCGGTACATCGGGCCCCTGCTGTGCATCAACCTCGTCATGCACGCCGCCGTCCTCGGCATCGCCG
GCTGGTCGCTCAACAAGTTCATCGACCGCGAGACGCACCGCCGTACGTTACGTAGTACTACGTCTTGCAGTGGTCGTACG
TCCTTGCGTGCGACAT----GATCTGGTCTGGTTAACGACGTGA----CGTGGTGTGCAGATCTAGGAGGTAACACGGCG
ACGGGGTATCTGCTCGTCTTCTCGCTCATGGCCGGGGTGGTCGGCGCCTGCTCGGTGCTCCCCGCCCTGCTCCACGTCAG
GGCGCCCTGGCACAGCGAGAGCCTCGCCGCCGCGGCCTCCACCGGGCTCGTCTCCTGGGCGCTCACCGCCCTCGCCTTCG
GGTTCTGCTCTACACTCACACTCGCACCGCCTGTT------TCAAAAATGTAATCCCTCTCTATCTGCTACTCC-AGTAC
GTAACTCACAGTGCTGTGCCATCTTTTCCTGAACATCTGCAGCCTCGCGTGCAAGCATATCACTCTGGGGAACCGAGGAA
GGCGCCTGGTACGTCGCTATCTGCTAGCAACTCATCAC------------------------------A-CTGCTTTTCC
TTTCGATGATTCAACTTATGAATTATGTGTTCGTCTTGCTGGCAGAGGACGTTGGAGGCGTTCATCACGATCTCGACGCT
GACGCAGCTGTTCTACCTGCTTCTGCTCCACGCCGGCGCCTTGAGCGGGGTGCTCGGAGTTGGACAGGCCTGCGGGAACC
ACGGCGAAACTTGCTGCCGCGAGATCCCTCGGGGAGAGCTCGCCGCGGACCATAAGACGGCGGGAGGGGCTCCGTCCCCG
GATGCATGACCAAA---ACTACCGGAAACTTGAATTGCACCGAGTACCAGCAACTGTATCGAGTGCAGTTCATCGGGCAC
TCG-TATGGTAAGCAATTTACCAAGCGCAGGATGACACCCTCGTG--------TATTTCCGTAGGCACTTGGTAGACAAA
TAACACTCAGGACAATAGGGATACATG-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>chr6B_2207
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------ATGTATACTAGGAGAATG
CCCGTGCGTTACTACGGGCAAAAGCCAGATGACCATGCATTGCCATGAAATAATAGAAACATGCACATTTATCAAATTGT
TATTTTAATTCAGAAATACA-TGTTAAGCATGATGGCATCTGGTTTCATCAAATAGCGACAAATTCAAACTCTCTTCGGC
TTCTTTCTTTCTCGGCAGTCTTGGTGTCTCCTAAACCAGAAAATCGCTCGCCACCAAAGAAC----ATATACCATCCATT
ATTAGATGGGTGTGTTTAGGGCACATCTAGATGTGCTCTAGTTATTGCACATCTAAGTGCTCAATCAAACTAGAAAGAAA
AAGAAAAAAAGACAAAAAGAAAATGCTTGCACGAATCTTAGTGTAAAATCAATGATATAAGAGTTAGATGTGCAATACTT
ATAGCATATCTAGATGTGCTTTAGCAAAACTGTTATTAAATAGTATCAATATCACACAA-TTCACACGTCCATGCGTGTC
ACTATTACAATGTACACAAGAACTGACAATTCCTTGTAAGGAGCCTCTTAA-TTTGAGCAATAACAGCAC-AAAAAGAGA
GATCCGACTTCCGAGAGTGTTCTTTATCAATAGCATGTCCGTTACATTCTTCATAGCAACAATCAGCCTGAAAAAAACAC
TGTAAATTGTTTAAGTTCGTGTCCAATATTAGGCCCAAATTGT-AACTACGGCCATTGGTAAGTATATAGAGCAATAGGT
TTGTAGCCCA-CCTGGCATCGGTTTATACTTAAAAAC---ATCTCTAACAAACTGAGAAAAGGACCGCAGATAGGCACAA
AAGGAACCGATTGTCGC-AAAAATCAAGTAACTTTTGA
>chr4D_2211
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------AAACTAGGAGAATG
CCCGTGCGTTGCTACGGGCAAAAGCCGGATGATCGTGCATTGCCATGAAATAATGGAAATATATACATTTATCAAATTAT
TATTTTAATTCAGAAATACA-TGTTAAGCATGGTGGCATCTGGTTTCATCAAATAGCGACAAATTCAAACTCTGTTCGGC
TTCTTTCTTTCTCGGCAGTCTTGGTCTCTCCTAAACCAGAAAATCGCCTGTCACCAAAGAAC----ATATACCATCCA--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------TTATTAAATAGGATCAATATCACTCAACATCACACGTCCATGCGTGTC
ACTATTACAAGGTACACAAAACATGACAATTCCTTGTAATGAGCCTCTTGA-TTTGAGCAATAATAGCAC-AAGAGGAGA
GATCCAACTTCCGAGAGTGTTCTTTATCAATAGCATGACCCTTCCATTCTTCATAGCAACCATGAGCCTGAAAAAC-CAC
TGCAAATTGTTTAAGTTCATGTCAAATATTATGCTCAAATAGTTAACTGCGGCCATTGGTAAGTCTATAGTGCAACAGGT
TTGTAGTGCA-CCCGACATCGGTTCGTACTTAAAAAC---ATCTCAAACAAACCGAGAAAAGGCCTATAGATAGGCAGAA
AACAAACCGATTGTCAC-AAAAATCAAGTACCTTTTGA
>chr1D_2213
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------ACTAGGAGAATG
CCCGTGCGTTGCTACGGGCAAAAGTCGGATG--CATGCATTGCCATGAAATAATAGAAATATGCACATTTATCATATTGT
TATTTTAATTCAGAAATACA-TGTTAAGCATGATGGCATATGGTTTCATCAAATAGTGACGAACTAAAACTCTCTTCGGC
TTCTTTCTTTCTCGGCAGTCTTGGTGTCTCCTAAACCAGAAAACCGCTCGCCACG------------TATACCATCCA--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------TTATTAAATAGTATCAATATCACTCAA-TTCACACGTCCATGTGTGTC
ACTATTACAAGGTACACAAAAACTGACAATTCCTTGTAATGAGCCTCTTAA-TTTGAGCAATAATAGCAC-AAAAAGAGA
GATCCAACTTCTGAGAGTGTTCTTTAACAATAGCATGTCCGTTCCATTCTTCATAGCAACAATCAGCCTGAAAAAA-CAC
TGTAAATTGTTTAAGTTCATGTTCAATATTAGGCCCAAATTGTTAACTGCGGCCATTGGTGAGTATATAGAGCAATAGGT
TTGTAGCCCA-CCTGGCATCGGTTTGTACTTAAAAAC---ATCTAAAACAAACTGAGAAAAGGTCCGCAGATAGGCACAA
AAGGAATCGATTGTCAC-AAAAATCAAGTAACTTTTGA
>chr1D_2213
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------ACTAGGAGAATG
CCCGTGCGTTGCTATGGGCAAAAGCCGGATGACCGTCTATTGCCATGAAATAATAGAAATATACGCATGTATCAAATTAA
TATTGTAATTCAGAAATATA-TGTTAAGCATGGTGGCAGCTGGTTTCATCAAATAGCGACAAATTCAAACTCTCTTAGGC
ATCTTTCTTTCTCGGCAGTCTTGGTGTCTCCTAAACCAGATAATCGCTCACCACCAAAGAAC----TTATACCATCCA--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------TTATTAAATAGTATCAATATCACTCAACTTCACACGTCCATGCATGTC
ACTATTACAAGGTACACAAAACCTGACAATTCCTTGTAATGAGCCTCTTAA-TTC-AGCAATAATAGCAC-AAAAAGAGA
GATCCAACTTCCGATAGTGTTCTTTATCAATAGCATGACCATTCCATTCTTC-TATCAACAATCAGCCTGAAAAAA-CAT
TGCAAACTGTTT-AGTTCATGTCAAATATTAGGCCCAAATTGTTAACCATGGCCATTGGTAAGTATATAGTGCAACAGGT
TCGTAGTGCACCCGGACATCGGTTTGTACTTAAAAAAAATATTTCAAAC-AACCGAGAAAAGGTCCGCATATAGGCATAA
AACGAACCGATTGTCAT-GAAAATCAAGTACCTTTTGA
>chr7D_2213
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------ACTAGGAGAATG
CCCGTGCGTTGCTACGGGCAAAAGCCGGGTGA----------CCATGCATTAATAGAAGTATGCACATTTATCATATTGT
TATTTTAATTCAGAAATACA-TGTAAAGCATGATTGCATATGGTTTCATCAAATAGTGACAAATTAAAACTCTCTTCGGC
TTCTTTCTTTCTCGGCAGTCTTGGTGTCTCCTAAACCAGAAAACCGCTCGCCACG------------TATACCATCCA--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------TTATTAAATAGTACCAATATCACTCAA-TTCACACGTCCATGCGTGTC
ACTATTACAAGGTACACAGAAACTGACAATTCCTTGTAATGAGCCTCTTAA-TTTGAGCAATAATAGCAC-AAAAAGAGA
GATCCAACTTCCGAGAGTGTTCTTTAACAATACCATGTCCGTTCCATTCTTCATAGCAACAATCAGCCTGAAAAAA-CAC
TGTAAATTGTTTAAGTTCATGTCCAATATTAGGCCCAAATTGTTAACTGCGGCCATTGGTAAGTATATAGAGCAATAGGT
TTGTAGCCCA-CCTGGCATCGGTTTGTACTTAAAAAC---ATCTAAAACAAACTGAGAAAAGGTCCGCAGATAGGCACAA
AAGGAACCGATTGTCAC-AAAAATCAAGTAACTTTTGA
>chr2D_2213
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------ACTAGGAGTATG
CCCGTGCGTTGTTACGGGCAAAAGCTGGATGACCGTGTATTGCCATAAAATAATAAAAATATACACATGTATTAAATTAT
TATTTTAATTCAGAAATACG-TGTTAAGCATGGTGGCATCTGGTTTCATCAAATAGCGACAAATTCAAACTCTCTTAGGC
TTCTTTCTT----GGCAGTCTTGGTGTCTCCTAAACCAGATAATCGCTCGCCACCAAAGAAC----TTATACCATTCA--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------TTATTAAATAGTATCAATATCACTCAACTTCACACGTCCATGCGTGCC
ACTATTACAAGGTACAAGAAACCTGACAATTCCTTGTAATGAGCCTCTTAATTTC-AGCAATAATAGCACAAAAAAGAGA
TATCCAACTTTCGAGAGTGTTCTTTATCAATAGCATGACCATTCCATTTTTC-TATCAACAATCAGTCTGAAAACGT---
TGCAAATTGTTT-AGTTCATGTCAAATATTAGTCCCAAATTGTTAACTGCGG------GTAAGTATGTACTGCACTCGAC
ATC------------------GTTTGTATTTTAAAAC---ATTTCAAACAAACTGAGAAAAGGTCCGCAGATAGGCACAA
AACAAACTGATTGTCACAAAAAATCAAGTACCTTTTGA
>chr2D_2219
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------AGAATG
CCCGTGCGTTGCTACGGGCAAACACCAGATGACCATGCATTGCCATGAAATAATAGAAATATACACATTTATCAAATTGT
TATTTTAATTCAGAAATACGTTGTTAAGCATGATGGCATCTGGTTTCATCAAATAGCGACAAATTCAAACTCTCTCCGGC
TTCTTTCTTTCTTGGCGGTCTAGGTGTATCCTAAACCAGAAAATCGCTCGCCACCAAAGAAC----ATATACCATCCA--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------TTACTAAATAGTATCAATATCACTCAA-TTCACACCTCCATGCGTGTC
ACTATTACAAGGTACACAAAATCTGACAATTCCTTGTAATGAGCCTCTTAATTTC-AGCAATAATAGCAC-AAAAAGAGA
GATCCAACTTCCGAGAGTGTTCTCTATCAATAGCATGGCCATTCCATTCTTCATAGCAACAATCAGCCTTAAAAAA-CAC
TGTAAATTGTTTAAGTTCATGTCCAATATTAGGCCCAAATTGTTAACTGCGGCCATTGGTAAGTATGTAGAGCA------
--------------------------------------------------------------------------------
--------------------------------------
>chr5D_2219
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------AGAATG
CCCGTGCGTTGCTACGGGCAAACACCAGATGACCATGCATTGCCATGAAATAATAGAAATATACACATTTATCAAATTGT
TATTTTAATTCAGAAATACGTTGTTAAGCATGATGGCATCTGGTTTCATCAAATAGCGACAAATTCAAACTCTCTCCGGC
TTCTTTCTTTCTTGGCGGTCTTGGTGTATCCTAAACCAGAAAATCGCTCACCACCAAAGAAC----ATATACCATCCA--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------TTACTAAATAGTATCAATATCACTCAA-TTCACACCTCCATGCGTGTC
ACTATTACAAGGTACACAAAATCTGACAATTCCTTGTAATGAGCCTCTTAATTTC-AGCAATAATAGCAC-AAAAAGAGA
GATCCAACTTCCGAGAGTGTTCTCTATCAATAGCATGGCCATTCCATTCTTCATAGCAACAATCAGCCTTAAAAAA-CAC
TGTAAATTGTTTAATTTCATGTCCAATATTAGGCCCAAATTGTTAACTGCGGCCATTGGTAAGTATGTAGAGCA------
--------------------------------------------------------------------------------
--------------------------------------
>chr3D_2219
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------AGAATG
CCCGTGCGTTGCTACGGGCAAACACCAGATGACCATGCATTGCCATGAAATAATAGAAATATACACATTTATCAAATTGT
TATTTAAATTCAGAAATACGTTGTTAAGCATGATGGCATCTGGTTTCATCAAATAGCGACAAATTCAAACTCTCTCCGGC
TTCTTTCTTTCTTGGCGGTCTTGGTGTATCCTAAACCAGAAAATCGCTCGCCACCAAAGAAC----ATATACCATCCA--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------TTACTAAATAGTATCAATATCACTCAA-TTCACACCTCCATGCGTGTC
ACTATTACAAGGTACACAAAATCTGACAATTCCTTGTAATGAGCCTCTTAATTTC-AGCAATAATAGCAC-AAAAAGAGA
GATCCAACTTCCGAGAGTGTTCTCTATCAATAGCATGGCCATTCCATTCTTCATAGCAACAATCAGCCTTAAAAAA-CAC
TATAAATTGTTTAAGTTCATGTCCAATATTAGGCCCAAATTGTTAACTGCGGCCATTGGTAAGTATGTAGAGCA------
--------------------------------------------------------------------------------
--------------------------------------
>chr3D_2337
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------TGGCATCTGGTTTCATCAAATAGCGACAAATTCAAAATCTCTTCGGC
TTCTTTCTTTCTCGTTAGTCTTGGTCTCTCCTAAACCAGAAAATCGCATGTCACCAAAGGACACATATATACCATCAA--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------TTATTAAATAGGATCAATATCACTCAACATCACACGCCCAGGCGTGTC
AATATTACAAGGTACACAAAACATGACAATTCCTTGTAATGAGCCTCTTGATTTC-CGCAATAATAGCAC-AAAAGGAGA
GATCCAACTTCCGAGAGTGTTCTTTATCAATAGCATGGCCATTCCATTCTTCGTAGGAACAATCAGCTTGAAAACC-CAC
TGCAAATTGTTTAAGT-CATGTCAAATATTACGCCCAATTTGTTAACTGCGGCCATTAGTAAGTATATAGTGCAATAGGT
TTGTAGTGCATA-CGACATCGGTTCGTGCTTAAAAAC---ATCTCAAACAAACTGAGAAAAGGTCTGTACATAGGCAGAA
AACAAACCGATTGTCAC-AAAAATCAAGTACCTTTTGA
>SNPs
-----------------------------------S---------------------------S----------------
--------------------------------------------------------------------------------
-S--------S--S-------S------------------------------------------SSSS--------S---
------------------------------S---------------------------S-------SSS--------S--
----S-S--SSSSSSSSSSSS---------S------------------------------S------------------
---------------------------------------S----------------------------------------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
S----------SSS------------------------------------------------------------------
---------S----------------------------------------------------------------------
-----------------------------------------------------------------------------S--
--------------------------------------------------------------------------------
----------------SS--------------------------S------------------S----------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
------S-------------------------------------SSSS--------------------------------
-----------------------------------------------------------S--------S-----------
--------------------------------------------------------------------------------
--------S-------------------------SSSSSSS-------------------------------S-SSS---
--------------------------S-----------------------------------------------------
-------------------S-----------------S--------------------------S---------------
--------S-----S--------------S--------------------------------------------------
----------------------------------------------S-S-------------------------------
--------------------------------------------------------------------------------
-------------------------S----S------------------------------S------------------
---S---S--S-----------------S---------S-----------------------------------------
---------------------------S--------------------------------------S-S-SS---S----
-----S-SSS-SSS----------------------S--------------------S-S---S-SSSSSSSS---SSS-
-SSSSSSSSSS---------S-------------S--S-S-----------SSSSSSSSSSS----------S-------
----------SS------------------------S-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S----------------------------------------------------------------S----------
-----------S---------------------------------------------------------------S----
--------------------------------------
>forward_440
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------GCTATGCTGACACGCTCCTT----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>reverse_2251
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------GCCATCAAACGTCATGTCGG--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
