>input_sequence_67277
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----------------------------------------------------------------ATGGCGGCCGCCGCAT
CCACCTCGCCCTCCGGCAGCGGCCGCCGCAACCCGGCGGCGGGAGCGGGCGCTTGCCCCATCTGCCTCGAAGCCATCGAA
GACGAGGCCTACCTCGACGCCTGCCTGCACTCGTTCTGCTACAGGTGCATAACGCAGTGGGTGAGCATCGTGGCGAGCAA
GCGGGAAGAACCCTTGTCCACGGCGAGGTGCCCCCTCTGCAAGACCGAGAGCGCGTCCATCATCCACGCCTTCGACGGCG
AGTCGTTCCAGCAGCATCACATCGAGCAGGAGCAGCACCGCCCGGGGAAGAAGAAGACGAGACACCTCTCAGACGCGCAC
GCGCTCATATCACAAATCTACAACACGAGAGAGGTCTCAGGCGACGAGCCGAGCATGCAGAAATACTGGAAGCAGCGGAA
GTACCTCCGGAGGAACGTGTGGCTCGAGCCATGGCTGAGGCGAGAGATCCAGGCCCTCACGCGGGACGAGGACGTCGACG
CCGTGGTCTACCACGTCCACGGCGTCATCGAGTTTGCCTT------------GAAACCGCACGCTTCCAAGGAGGCCTCG
CCGGAGCGCGCGAGGGAGGAGTTCGTGCGTTCGCTCTCCGACGCCGCGAGGCCGTTCCTCCATGGACGGACGGCGCGGTT
CGTCGCGGAGGCGGAGCTCTTCCTGGCCTCGCAGCTGAACATCGACGCGTACGGCAGGGCGCGCGCCCGGAGGTTCAGGG
AGTCCGCTTCGCATGTGACGAGGGAGCAGGGTGCGCTGCCGCGGGACCGTCCTCTCGAGGATCACTACTTCTACTTGTAC
TTTTTGAGTGACGAGGCAGATTACGTTGGCGGTGAGATGTAG--------------------------------------
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-------------------------------------------------------
>chr3D_1_TraesCS3D01G400900
GGTGATGGTGATATCCGGGCACCTTGTGCTCAAGATGTTATCAGTCACATGAGCCACCGCTCGGTTGATTTGGAGGAATT
CACGAAGACTGAAAACACGAGCTTTATCATGGCGGCCTGGAATGGAACCAGCACTTAGGAAGAGCTGTGAGAGCATAGCG
GGGAGCTTGAGCATTTGCCTGGATAGGACGCAGGCCCTTATAGCGTCGAGCGTGTCCACCCTCTCCAGAATGTTGAGCAG
AAGGTCATTGGGCAGCTTGCTAAGCCTGTCTCCGTCTCCATTGTCAG---------CGTTGCGAGTTTCTTCTTGCGTCG
GATTTAGCTGGAACGAACAACAAATAATCATCATTTTGAGGATGAACCTGACGTGTAGGACAAACATCAATCA-GTCAGG
CACAAAAGGAACAACACTTACATTGAGGCCGTTTTTGTCCTTCATGGCTGATCGGATCAACAAACTGACCTAATTTCGCC
CCGAACGCAGTCAGGCATAATAGCCGAAGCAGAGGTAGTGGCAACGAAGGAGAGCGATGGTCATGGTGGCCGGCGGCGGA
GGAGAGTGGTGGTGGCCGGAGCGGACGGCTAGGGAGGGTGCGGGCGGGGGAAGTCGCAGGGGACGACGGCAACCGAGGTT
AGTGTTGGCCGCAGCGGACGGCTGGCGTG--------TGGTGGGGTGTTACAGAAGGGATGGAGGCGGGGTACTGTGGTG
GCCGGCGGCGGAGACCGGGAGAGGCTGG--GAGACGGGACGGGTTGCCTTGCCGCAGGGGAAGGCGGCGCCTGCGAATTC
ACTGGATCGGCCTAGGGTGAATTATCAGCGGCAAGGATTAAAACTGGCCGATCAGTTCCCTTGTCGTGGTCGTATCGCAA
TCCGTGTCCGGCCTTCT----GTTTTTTCTCGCGTTGTGCACGCCTATATATGACTGCACTATCTACAAATCCATAGAAC
CGGGACGAGACAAGCCCCAAAACCGTAAGGCGGCGCCGACCCGTCTCGACTTCCAGTTCCAAGCATGGCGGCCGCCGCAT
CCACCTCGCCCTCCGGCAGCGGCCGCCGCAACCCGGCGGCGGGAGCGGGCGCTTGCCCCATCTGCCTCGAAGCCATCGAA
GACGAGGCCTACCTCGACGCCTGCCTGCACTCGTTCTGCTACAGGTGCATAACGCAGTGGGTGAGCATCGTGGCGAGCAA
GCGGGAAGAACCCTTGTCCACGGCGAGGTGCCCCCTCTGCAAGACCGAGAGCGCGTCCATCATCCACGCCTTCGACGGCG
AGTCGTTCCAGCAGCATCACATCGAGCAGGAGCAGCACCGCCCGGGGAAGAAGAAGACGAGACACCTCTCAGACGCGCAC
GCGCTCATATCACAAATCTACAACACGAGAGAGGTCTCAGGCGACGAGCCGAGCATGCAGAAATACTGGAAGCAGCGGAA
GTACCTCCGGAGGAACGTGTGGCTCGAGCCATGGCTGAGGCGAGAGATCCAGGCCCTCACGCGGGACGAGGACGTCGACG
CCGTGGTCTACCACGTCCACGGCGTCATCGAGTTTGCCTT------------GAAACCGCACGCTTCCAAGGAGGCCTCG
CCGGAGCGCGCGAGGGAGGAGTTCGTGCGTTCGCTCTCCGACGCCGCGAGGCCGTTCCTCCATGGACGGACGGCGCGGTT
CGTCGCGGAGGCGGAGCTCTTCCTGGCCTCGCAGCTGAACATCGACGCGTACGGCAGGGCGCGCGCCCGGAGGTTCAGGG
AGTCCGCTTCGCATGTGACGAGGGAGCAGGGTGCGCTGCCGCGGGACCGTCCTCTCGAGGATCACTACTTCTACTTGTAC
TTTTTGAGTGACGAGGCAGATTACGTTGGCGGTGAGATGTAGGACGTGTTTGTTTCATGGTTTTGCGGCCGGTGTCTGAT
CGCAGCGGCATCCGAACCCGTTACTCTATGTACGACGGAACTAAATACCGCGCAATGAAATAAGGGGCTGTCGAGAACAA
ACGTCGCTCTGTTGGTTAGCCCTGTTTTTTTTTTCTTCTAAATAACCACATATATTTCATTTTTTTTGGCGAGT-ACACA
TATGTTTCATTAGACAAACATATTACAAAGAGTACACATGTGGTCATCGCAAGAGACATACATAGATGTCTTGCAATATT
GC--------------------GTCAAACTAGAATTTCACTTTGGCAGAATCTTGTGCCACGCCAAAACGTCGCCCACCA
TCGTCCTCCTCCGCTGCTGAGGCAACGTCGAAGAAAGAGGGGAACTTTCCTCATACCAAGATCTAGAGGAGCACC-ATTG
CATACAA-GGATGTTTTTCGAGTCGATGAAACGGACCGC----CGCAAGCGACGAGACCGAGACTTTGTGGCACGTC-GG
CGGGGTTCTTCTCCGTGTCCGCTAGATCTCAGCGCCGTCAACTTCATTCGATGAGATCGAAGAAGAGGAACGCCGCT---
-------------ACATCCCGCCATCCACGCACACCACTGCAAGACACCAAACACAACT-GCAACAGCCGACACCAACGC
TACCCGAGAGAGTGTTGAGCGCTGACCATCAGACACAAAACCTTACCGAATCTGAAGACCGGCAACAAGACCGAGCCACT
TGCTCCTCGACGCCACACATTAAAGCACCA-CCGAGATGGAGGAAGAGCGGAATCAAA--TTATTTCGACGCGGCGCTCA
CTCAAGCCG-----------------------------------------------------------------------
--------------CTAAAGCGGCAGACGGAGGCGGACGAGGACCCATCGTCGCCGGCGGTGTTGAGGAAAGCAAGAGAA
ATCGCCTCCTATATCGCCTCTCTGGAGCGATTCCAGGAGCGAACGGGGCGGGTCTCGAGTCTCGGCTCTGCCACCAGTGT
TTAGAGATTTTCTTCTATAAGAATATGGGCAGTGCTACGCGTCGGGCCGATAATT
>chr3A_1
GGTGATGGTGATATCCAGGAACCTTGTTCTCAAGATGTTATCAGTCACATGAGCCATGGCTCGGTTGGTTTGGAGGCATT
CACCAAGACTGAAAACACGAGCTTTATCATGGCGGCCTAGAATGGAGCCAGCACTTAGGAAGAGCTGTGAGAGCATGGCA
GGGAGCTTCAGCATTTCGTTGGATAGGACGCAGGCCCTTATAGCATTGAGTGTGTCCACCCTCTTCAGAATGTTGAGCAG
AAGGTAAATGGGCAGCTTGCTAAGCCTGTCTCC---TCCATTGCCAGCGGCGAATTCGTTGCGAGTTTCTTCTTGCGCTG
GATTTAGCTG----GAACAACAAATAATCATCATTTTGAGGATGAACCTGACATGTAGGACAAACATCAATCA-GTCAGG
CACAAAAGAAACAAGACTTACATTCAGGCCGTTTTTGTCCTTCATGGCTGATCGGTTCAACAAACTGACCTAATTTCGCC
CCGAACGCAGTCAGGCATAATAGCTGAAGTGGAGGTGGTGGCAAGGAAGGGGAGCG------ATGGTGGCCGGCGGCGGA
GGAGAGCGATGGTGGCC-GAGCGGACGGCTAGGG----TGTGGGCGGGGGCAGTCGCAGGGGACAACGGCAACCGAGGGT
AGTGTTGGCCGCAGCGGACGGCTGACGTGTGGTGGCCTGGTGGGGTGTTACAGAAGGGATGGAGGCGGCGTACTGTGGTG
GCCGGCGGCGGAGATCGGGAGAGCCGGGGCGAGACGGGACGGGTTGCCGCA------GGGAAGGCGGCGCCTGCGAATTC
ACTGGATCGGCTTAGGGCGAATTATCAGCGGCAAGGATTAAAACTGGCCGATCAGTTTCCATGTCGTGGTCGTATCATAG
TCCGTGTCCGGTCTTCTGTTGGTTTTTTCTCGCGTTGTGCACGCCTATATATGACTGCAGCATGTACGAATCCATAGAAC
CGGCACGAGGCAAGCCCCAAAACCGTAAGGCTCCGCCGACCCGTCTCGGCCTCCAGTTCCAAACATGGCGGCCGCCGCAT
CCGCCTCGCCCTCCGGCAGCGGCCGCAGCAACCTGCCCGCGACGGCGGGCGCTTGCCCCATCTGCCTCGAAGCCATCGAA
GACGAGGCCTACCTCGACGCCTGCCTGCACTCGTTCTGCTACAGGTGCATAACGCAGTGGGTGAAGATCGTGGCGAGCAA
GCGCGAAGCACCCTTGTCCTCGGCGAGGTGCCCCCTCTGCAAGACCGACAGCGCGTCCATCGTCCACGCCTTCGACGGCG
AGTCGTTCCAGCAGCATCACATCGAGCACGAGCAGCACCGCCCGGGGA---------------ACCTCTCAGACGCGCAC
GCGCTCATATCACAAATCTACAACACGAGAGAGGTCTCAGGCGACAAGCCGAGCATGCAGAAATACTGGAAGCAGCGAAA
GTACCTCCGGAGGAACGTGTGGCTCGAGCCATGGCTGAGACGGGAGATCCAGGCCCTCACGCGGGACGAAGACGTCGACG
CCATAGTCTACCACATCCTCGGCATCATCGACTCCGCCACGAGAACGGCAGAGAAGCCGCACGCTTCCAAGGAGACCTCG
CCGGAGAAAGCAAGGGAAGAGTTCGTGCGTTCGCTGTCCGACGCCGCGAGGCCGTTCCTCCATGGACGGACGGCGCGGTT
CATCGCGGAGGTGGAGCTCTTCCTGGTCTCGCAGCTGAACATCGACGCGTACGGCAGGGCGCGCGCCTGGAGGTTCAGGG
AGTCCGCTTCGCATGTGACGAGAGAGCAGGGTGCGCTGCCGCGGGGCCGTCCTCTCGAGGATCACTACTTCTACTTGTAC
TTTTTGAGCGATCAGGCAGATTACGTTGGCGGTGAGATGTA---------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------
>chr3B_37
------------------------------------GTTGTCAGTTACATGAGCCACGGCTCGGTTGGTTTGGAGGAATT
CACCAAGACCGAAAACACAAGCTTTATCATGGTGGCCTAGAATGGAACCAGTACTTAGGAAGAGCTCTGAGAGCATGGAG
GGGAGCTTCAGCATTTGCTTGGATAGGAAGTAGGCCCTTATAGCATCGAGTGTGTCCACCCTCTCCAGAATGTTGAGCAA
AAGGTCATTGGGCAGCTTGCTAAGCCTGTCCCC---TCCATTGGCAGCGGCGACTTTGTTGAGAGTTTCTTCTCGCGTTG
GATTTAGCTG----GAACAACAAATAATCAA---TTTGAGGATGAACCTGACGTGTAGGACAAACATCAATCAAGTCAGG
CACAAATGAAACAACACTTACATTCAGACCATTTGTGTCTGTCATGGCTGATCGGATCAACAAATTGACCTTATTTCGCC
CCAAACGCAGTCAGGCATATTAGCCCAAGCGGAGGTGGTGGCAACCAAGGAGAGCG------ACGGTGGCCGGCGGCGGA
GGAGAGTGGTGGTGTCCGGAGCGGACGGCTAGCA----TGCGGGCGGGGGAAGTCGCAGGGGACGACGGCAACCGA----
--------------------------------------------------------------------------------
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-------------------------------------------------------
>chr4D_2023
ATTTT---------------------------------------------------------------------------
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----------------------------------------------------------------TTTTGGAATAACCACA
TACATTTCATTAGACAAACATATTACAAAGAGTACACATGTGGTCATCGCAAGCGACATACATAAATGTCTTGCAATATT
GCATC-AAAGACTTTGTAAGAAGTAAAACTAGAATTTCACTTGGGCAGAATCTTGTGCCACGCCAAAACATCACCCACCA
TCGTCCTCCTCCGTCGCTGAGGCAACGTCGAAGAAAGAG--------------TACCAAGATCTAGAGGAGCACCTTTTG
CATATAA-TGATGCTTTTCGAGCCAATGAAACGGACCGC----TGCAAGCAACGAGACCGAGACTTTGTGGCACGTCAGG
CGGGGTTCTTCCCCGTGTCCACTAGATCCCAGCATCGTTAACTTCATTCGACGAGATCAAAGAAGATGAACAGCGAT---
-------------GCATTCTGCCATCCACACACCCCACTGTAAAACACCAAACGGAACC-ACAACAGCCGACACCAACGC
CACCCGAGAGAGTGTTGCGCGCCGACCATCAGACACAAA-TCATACCGGATCTGAAGACCGGCAAGAAAACCAAGCCACC
TGCTCCTCGACGCCGCCCATTAGAGCGCCA-CTGAGATGGAGGACGAGTAGAAGCAAA--TTATTTCGACGCGGCGC---
--------------------------------------------------------------------------------
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-------------------------------------------------------
>chr6B_2024
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-----------------------------------------------------------TTTTTTTTGGAAAAAAACACA
TATATTTTATTGGACAAATATATTACAAAGAGTACACATGTGATCATCAGAAAAGACATACATAGATGTCTTGCAATATT
GCATT-AAAGACTACGCAAGAAGTAAAAATAGAATTTCACTTCGGCAAAATCTTGTGCCACGCCAAAACGTCACCCACCA
TTGTCCTCGCCCGCCACTAAGGCAACGTCTAAGAAAGAGGGGAACTGCCTTCATATCAAGATCCTGAGGAGCACC-TTTG
CATACAAAGGATGCTTTTCGAGCCGATGAACAGGACCGCCGCATGCAAGCAATGAGACCGAGACTTTGTGGCACGTTGAC
TGAGGTTAGCTCCCATGTGCGCTATATCCCAGCGCCATCAACTTCATTAGATGAGATCGAAGAAGAGAAACATCACTGCA
CCCCACCATCCACGCACCCCACCATCCACGCACCCCACTGCAAGATAGTAAAAAAAACCCGCAACAACCGGCGCCAGCGC
CACCCGATAGAGTGATGAGCGTCGACTATCAGACACAAA-TCTTACCGGATTTGAAGACAGACAAGAAGACCGAGCCACC
TGCTCTCCGATGCCGCCCGTTAGAGCGCCA-TCGAGACGGATGAAGAGCAGAAGCAAAAATTATTTCGACAAGGCGC---
--------------------------------------------------------------------------------
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-------------------------------------------------------
>chr2B_2040
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----------------------------------------------------------------------------CACA
TATATTTCATTAGACAAACGTATAACAAAGAGTACATATGTGGTCATCACAGAAGACATACATAGATGTCATGCAATATT
GCATT-AAAGACTTA-----------------------ACTTCGGCGGAATCTTATGCCACGCCAAAACATCGCCCACCA
TCGTTCTCCACCGCTACTGAGGCAACGTGGAAGAAAGAGGGGAGCTGCCTTCATACCAAGATCTAGAGGAGCACC-TTTG
CATGCAA-GGATGCTTTTCAAGCCGATGAACCGGACCGC----CGCAAGCGACGAGACCGAGACTATGTGGCACGT-GGC
CGTGGTTCTTCCCCGTGTCGGTTAGATCCTAGCGCCATCAACTTCATTCGATGAGATCGAAGAAGAGGAACGCCACT---
-------------GCATTCTGCCATCCACGCAGCCCACTGCAAGACATCAAACACAACC-ACAGGAGCCGACACCAACGC
TATCTGAGAGAGTGTTGAGCGCCGACCATCAAACATAAG-CCTTACCGGATCTGAAGATCGGGAAGAAGACCGAGCCACC
TGCTCCTCGGTGCCGCCCATTAGAGCGCTA-CCGAGATGGAGGAAGAGCAGAAGCAAA--TTATTTCGACACGGCG----
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-------------------------------------------------------
>chr7B_2040
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----------------------------------------------------------------------------CACA
TATATTTCATTAGACAAACGTATTACAAGGAGTACATATGTGGTCATTACGGAAGAGATACATAGATGTCTTGCAATATT
GCATC-AAAGACTTCACAAGAAGTAAAACTAGAATTTTACTTCGGCAGAATCTTGTGCCATGTCCAAACGTCGCCCACCA
TCGTCCTCCTCCGCCGCTGAGGCAACGTCGAAGAAAGAGGGGAACCACATTCATACCAAGATCTAGAGGAGCACC-TTTG
CATACAA-TGATGCTTTTCGAGCCGATGAACCGGACCGC----CGCAAGCGACGAGACCGAGACTTTGTGGCACGTCAGC
CGGGGTTCTTCCCCGTGTCCGCTAGATCCCAGCATCGTCAACTTCATTCGACTAGGTCGAAGAAGAGGAACGCCGCT---
-------------GCATTCCGCCATCCACGTACCCCATTGCAAAACACCAAACACGACC-GCAACAGTTGGCACCAACAC
CACTCGAGAGAGTGTGAAGCGCCGACCATCAGACACAAA-TCTTACCAAATCTGAAGACCGGCAAGAAGACCGAGCCACC
TGCTCCCCAGCGCCACCAATTAGAGCGTCA-CCGAGATGGAGGAAGAGCATAAGCAAA--TTATTTCGACACG-------
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-------------------------------------------------------
>chr5A_2040
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----------------------------------------------------------------------------CACA
TATATTTCATCAGACAAACATATTACAAAGAGTACACATGTGGTCATTACAGAAGACATACTCAGATGTCTTGCAATATT
ACAAC-AAAGACTTCACAAGAAGTAAAACTAGAATTTCACTTCGGTAGAATCTTGTGCCACGCCCAAACATCGCCCACCA
TCGTCCTCCTCCGCTGTTGAGGCAACGTCGAAGAAAGAGGGGAACCGCCTTCATACCAAGATCTAGAGGAGCACC-TTTG
CAAACAA-CGATGCTTTTCGAGCCGATGAACCGGACCGC----CGCAAGCGATGAGACCGAGACTTTGTGGCACGTCGAC
CGGGGTTCTTCCCCGTGTCCACTAGATCCCATCATCGTCAACTTCATTCGACTAGGTCAAAGAAGAGGAACGCCGCT---
-------------GCATTCCGCCATCCACGTACCCCACAGCAAGACACCAAACACAACC-GCAACAGCCGGCACCAACGC
CACTCGAGAAAGTGTGAAGCACCGACCATCAAACACAAA-TCTTACCGGATTTGAAGACCGGCAAGAAGACCGCGCCACC
TGCTCCCCAGCATCGCCCATTAGAGCGCCA-CTGAGATGGAGGAAGAGCAAAAGCAAA--TTATTTTGACGCGGCGC---
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-------------------------------------------------------
>chr5A_2040
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----------------------------------------------------------------------------CACA
TATATTTCATTAGACAAACTTATTACAAAGAGTACACATGTGATCATTACAGAAGACATACATAGATATCTTGCAATATT
GCATC-AAAGACTTCACAAGAAGTAAAACTAATATTTCACGTGGGCATAATCTCGTGCCATGCCCAAACGTCGCCCACCA
TCGTCCTCCTCCGCCGTTGAGGCAACATCGAAGAAAGAGGGGAACCGCCTTCATACCAAGTTCTAGAGGAGCACC-TTTG
CATACAA-CGATGCTTTTCGAGCTGATGAATCGGACCGC----CGCAAGCGACGAGACCGAGACTTTGTGGCACATCGGT
CGGGGTTCTTCCCCGTGTCCGCTAGAACCCAGCGTCGTCAACTTCATTTGACTAGGTCGAAGAAGAGGAACGCCGCT---
-------------GCATTCCGCCATCCACGTACCCCACTTCAAGACACCAAACACAATC-GCAACAGCCGGCACAAACGC
CACCCGAGAGAGTGTGAAGTGCCGACCATCAGACACAAA-TCTTACCGGATCTAAAGTCCGGCAAGAAGACCGAACCACC
TACTCCCCAGCGCCGCCCATTAGAGCCCCA-CCGAGATGGAGGAATAGCAGAAGCAAA--TTATTTCGATGCGG------
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-------------------------------------------------------
>chr5D_2040
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----------------------------------------------------------------------------CACA
TATATTTCGTTAGACAAACTTATTATAAAGAGTACACATGTGGTCGTTACAGAAGACATACATAGATGTCTTGCAATATT
GCAAC-AAAGACTTCACAAGAAGTAAAACATGAATTTCACTTCGGCAGAATCTTGTGCCACGCCCAAACATCACGCACCA
TCGTCCTCCTCCGCCGCTGAGGCAACGCCGAACAAAGAGGGGAACTGCCTTCATACCAAGATCTAGAGGAGCACC-TTTG
CAAACAA-CGATGCTTTTCGAGCCGATGAACCAGACCGC----CGCAAGCGACGAGACCGAGACTTTGTGGCACGTCGGA
CGGGGTTCTTCCCCGTGTCCGCTAGATCCCAGCGTCATCTACTTCATTCGACTAGGTCGAAGAAGAGGAACACCGTT---
-------------GCATTCCGCCATCCACGTACCCCACTGCAAGACACCAAACACAACC-GCAACATCCGGCACCGACGC
CACCCGAGAGAGTGTGAAGCGCCGATCATCAGACACAAA-TCTTACCGGATCTGAAAACCGGCAAGAAGACCGAACCACC
TGCTCCCTAGCGCCGCCCATTAGAGCGCCG-CCGAGATGGAGGAAGAGCAGAAGCAAA--TTATTTCAACGCGGCGC---
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-------------------------------------------------------
>chr7D_2040
CACATCATT-----------------------------------------------------------------------
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--TATTCCATTAGACAAATGTATTACAAAGAGTACACATGTGGTCATCACAATAGACATATATAGATGTCTTACAATATT
GCATCAAAAGACTTCGCAAGAAGTAAAACTAGAATTTCACTTCGGTAGAATCATGTGCCACGCCAGAACGTCGCCCACAA
TCGTCCTCCTCCACCGCTGAGGCAACGTTGAAGAAAGAGGGAAACTACCATTATGCCAAGATCTAGAGAAGCACA-TTTG
CATACAA-GAATGCTTTTCGAGCCGATGAACCGGACTGC----CGCAAGCGACGAGACCGAGACTTTGTGGCACGTCGGC
CGGGGTTCTTCCCCATGCCCGCTAGATCCCAACGCCGTCAACTTCATCCGACACGTTCGAAGAAGAAGAACACCGCT---
-------------GCATGCCGGCATCCACACACCCCACAGCAAGACACCAAACACAACC-GCAATGGCCGACACCAACGC
CACCCGAGAGAGAGTTGAACGTCGACCATCAGACACAAA-CCTTACTGGATCCGAAGACCGGCAAGAAAACCAAGACACT
TGCTCCTTGGTGTCGCCTATTAAAGCACCATCCGAGATGGAGGAAGAGCAGTAGCAAA--TTATTTCGACACGG------
--------------------------------------------------------------------------------
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-------------------------------------------------------
>chr5A_2042
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------CA
TATATTTCATTAGACAAACGTATTACAAAGAATACACATGTGGTCATTACAGAAGACATACATAGATGTCTTGCAATATT
GCAAC-AAAGACTTCACAAGAAGTAAAACCAGAATTTCACTTCGGCAGAATCTTGTGCCACGCCCAAACATCGCCCACCA
TCGTCCTCCTCCGCCGCTGAGGCAATGTCGAAGAAAGAGGGGAACCGCCTTCATACCAAGATCTAGAGGAGCACC-TTTG
CAAACAA-CGATGCTTTTCGAGCCGATGAATCGGACTGC----TACAAGCGACGAGATCGAGATTTTGTGGCACGTCGGC
CGGGGTTCTTCCATGTGTCTGCTAGATCCCAGCGTCGTCAACTTCATTCGACTAGGTCGAAGAAGAGGAACGCCGTT---
-------------GCATTCCTCCATCCACGTACCCCACTGCAAGACACTAAACACAACC-GCAACAGCCGACACCAACGC
CACCCGAGAAAGTGTGAAGCGCCGACCATCAGACACAAA-TCTTACCGGATCGAAAGACCGGCAAGAAGACCGAGCCACC
TGCTCCCCAGCGCCGCCCATTAGAGCGCCA-CCGAGATGGAGGAAGAGCAGAAGCAAA--TTATTTCGACG---------
--------------------------------------------------------------------------------
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-------------------------------------------------------
>chr7D_2044
--------------------------------------------------------------------------------
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TATATTTTATTGTACAAACGTACTAGAAAGAGTACACATGTAGTCATCACAGAAGACATACATAGATGTCTTGCAGTA--
GCATA-AACGACTTCAC---AAGTAAAACTAGAATTTCACTTCGACAGAATCTTGTTTCACGCCCAAATGTCGCCCACCA
TCGTCCTCCTCCACCGCCGAGGCAATGTCGAAGAAAGAGGGGAACCGCCTTCATACCAAGATCTAGAGGAGCACC-TTTG
CATACAA-C---GCTTTTCGAGCCGATGAACCGTACCGC----CGCAAGCGACGAGACCGAGACTTTGTGGCATGTCGGC
CGGGGTTCTTCCCCGTGTCCGCTAGATCCCAGCGTCGTCAACTTCATTTGATGAGATCAAAGAAGAGGAACGCCGCT---
-------------GCATTCCGCCATCCACGCGCCCCGTTGCAAGACACCAAACACAACC-GCAACAGCCCGCACCAACGA
CACCCGAGAGAGTGTGGCGCGCCGACCATCAGACACAGA-TCTTACCAGATCTGAAGACCAGCAAGAAGAACAAGCCACA
TGCTCCCCTACGCCGTCCATTGGAGCGCCA-CCAGGATGGAGGAAGAGCAGAAGCAAA--TTATTCCGATGCGGCGC---
--------------------------------------------------------------------------------
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-------------------------------------------------------
>chr6B_2129
--------------------------------------------------------------------------------
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-------------------------AAACTAGAATTTCACTTCGGCAGAATCTTGTGCCCCGCCAAAACATCGCCCACCA
TTGTCCTCCACCGTCGCCGAGGCAACGTCGAAGAAAGAGGGGAACTGCCTTCATACCAAGATCTAGAGAAGCACC-TTTG
CATACGA-GGATACTTTTTGAGCCGATGAACCGGACCGC----CGCAAGCGACGAGGCCGAGACTTTGTGGCATGTCGGC
CGAAGTTCTTCCCCGTGTCCGCTAGATCTCAGCGCCATCTACTTCATTCGATGAGATCGAAGAAGTGAAACGCCACT---
-------------GCATTCTGCCATCCACGCACCCCATTGCAAGACACCAAACACAATC-ATAACAATCGACACCAACAC
CACCTGAGAAAGTGTTGAGCACCAACCATCAAACACAAA-TCTTACCGGATCTGAAGATCGGCAAGAAGACCGAGCCACC
TGCTCCCCAGCACCGACCATTAGAGCGCTA-CCGAGATGGAGGAAGAGCAGAAGCAAA--TTATTTCGACGCGGCGC---
--------------------------------------------------------------------------------
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-------------------------------------------------------
>chr3B_2134
--------------------------------------------------------------------------------
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------------------------------AGAATTTCACTTTGGCAGAATCTTGTGCCACGCCAAAACGTCGCCCATCA
TTGTCCTCCTCCGCTGTTGAGGCAACGTCGAAGAAAGAGGGGAACTTTCTTCATACCAAGAACTAGAGGAGCACC-TTTG
CATACGA-GGATGTTTTTCGAGCCGATGAAATGGACCGC----ATCAAGCGACAAGACCAAGACTTTGTGGCACATCGGC
CGGGGTTCTTCTCCATGTCTGCTAGATCCCAGCATCGTCAACTTCATTCGATGAGATCGAAGAATAGGAACGCCGCT---
-------------GCATCCCGCCATCCACGCACCCCACTGCAAGGCACCAAACACAACT-GGAACAGCCGACACCAATGC
TACCCGAGGGAGTTTTGAGCGCCGACCATCAGACACAAA-CCTTACCGAATCTGAAGACCGGCTAGAAGACCGAGCCACT
TTCTCCTCGACGCCGCCCATTAAAGCACCA-CCGAGATGGAGGAAGAGCAGAATCAAA--TTTTTTCGACGTGGCATCAT
CCCCACCATTGATGCAACACCTCTGAAAACCAACTATGCCTATCCTATACCTCTACCGGACGGAGACTGCCTGGGTCCCC
ACTCGCTCCCGCCACTAAAGCGGCAGACGGAGATGAACGAGGACCCAGCGTCACCGGCGGTGTTGAGGAAAGCAAGAGAA
ATCGCCTCCTATATCGCCTCTCTGGAGCGGTTCCAGGAGCGAACGGGGCAGGTCTCGAGTCTTGGCACTGCCACCGGTGT
TTAGAGATTTTTTTCTATAAGAATATGGGCAGCGCTACGTGTCGGCCG-------
>SNPs
----------------S--S-------S-----------------------------S---------S------------
---S----------------------------------S-------------------------------------S---
--------S---------S-------------------------S-----S-----------------------------
---------------------------------SSS-------S----------------------------------S-
----------SSSS------------------------------------------------------------------
--------S---------------S-------------------------------------------------------
------------------------------S-----S-------------------SSSSSS------------------
----------------------------------SSSS----------------------------------------S-
------------------------S-------------------------------------------S-----------
--------------S--------S-S----------------------SSSSSSSSS-----------------------
-----------S-----S---------------------------------------S--S---------------SS-S
-----------S-----------------------------------------------SS--S---S------------
---S-----S---------------------SS---------------S-S-----------S-----------------
--S-----------------------S------S-S-S---SSS------------------------------------
----------------------------------------------------------------SS--------------
---S----S----------S----------------------------S------------S------------------
----------------------------S-------------------SSSSSSSSSSSSSSS-----------------
---------------------------------------------S-------------------------------S--
---------------------------------------S--S--------------------------S----------
--S-S---------S---S----S-------S-SS---SS---------------S------------------S-----
------SSS--S-----S-----------------S--------------------------------------------
-S---------S--------------S----------------------------------------S------------
----------------------S----------------------S----------------------------------
--------S--SS----------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------SS-SS------
---S----------------------------------------------------------------------------
------------------------S-------------------------------------------------------
-------------------------------------------------S--------------------------S---
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
-------------S-------------------S----------------------------------------------
----------------------S----------------S-------------------------S--------------
----------------S--------------------------------S---------------------------SSS
-S-S-S-SS-----------------------------------------------------------------------
--------------------------------SS-S-----------S----S---------------------------
-----------------------------S-------------------S------------S---S--------S----
-----------S--------------------S------S-----S-SSSSSSSS
>forward_880
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------TTGTCGTGGTCGTATCGCAA
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>reverse_1968
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------CCGCGCAATGAAATAAGGGG-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
