>input_sequence_67259
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---------------------------------------------------------------ATGGCTCCCGCCACTTC
CACCTCGCCGCTATCCCGCCTCCTGCTCAGCCTCCCGAAGCCCAACGCCCAGCCGCCCCTGTGCGCCAAGCCGCCGAGCG
CGGACTCCGGCGCGGGCGCCACCAGCAAGAACCTCGTCCTCCGCCGGCGCGAGGCCGCGGCAGCCGTCCTATCCGCCGCT
CTCCTCACACGCGTCCTCCCCGCAGCGGCCGCGGCAGATGAGTGCGCGCTCGAGGCGACCCCCTCGGGCCTCGCCTTCTG
CGACCGCGTCGTCGGCACCGGCGCCGAGGCCGTCAAAGGCCAGCTCATCAAGGTCAGTCGAATTCGAGCCCAACCTCCGC
CACAGTGATTAATTAAGTTCTTGATGCACGCGCTGGCTTAGCGTAGTTCCGGTAGTAGTCGCGGGCTGCACGCTGACCGG
TTTCGTCGTGGTTTGGCCATGGCGTGGCGCGCGCACTGCAGGCGCACTACCGGGGGATGCTGGAGGACGGCACGGTGTTC
GACAGCAGCTACGGCCGCGGGAGGCCGCTGACCATCATGGTGGGCGTGGGGGAGGTGATCAAGGGGTGGGACCTGTGCCT
CGCCGGCGGCGAAGGGATCCCGCCGATGAGAGTCGGTACGCGACGCCTCAGCCGAGCTCACGTCGTTCTGCTCTGAACT-
-GAATTCCCCGGTGTGAGTCGGTGCTCTGGTGTGGTTTTTCAGGTGGGAAACGGAGCCTGAGGCTGCCGCCGGAGCTGGC
CTACGGGGAGAAGGGGGCCGGGTGCAGGGGGTGGGAGCCCACCTCGTGCGTCATCCCGCCCAACTCCACGCTCCTCTTCG
ACGTCGAGTACGTCGGCAGGGCATCCTCCTGA------------------------------------------------
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>chr7A_1_TraesCS7A01G485300
GGATGATATCCTGATGTTCTTCAAAGCTAGTGGTGATGGGGCAAGAGAGATATCAAACCTGTTAGAAAAGTACTGTCAAG
CTTCAGGTCAGAGAATTAACTCAAGCAAATCAGTTTTTTAGCAAAGGGTGCCCAACAAATATTAAGGAGGAGATCAAAGG
AGTTTTGAATGTCCCCAGTGAGTCTTTGAATGACAAGTAGCTAGGTATGCCATTTGATATAGGTACTTCCAAATATGGAG
CGTTCAAACATTTGAAGGACAGATTACGGAACAAGGTAAAATGTTGGATTGAGAAAAACATTTCCTATCAAGGTAAGGAA
GTTTTGGTTAAATCTGTAACTCAAGTAGTGTCAGTATTCTCAATGTCTTGTTTTAAGCTACCAAGAGGGTTATGTGAATA
TTTGAACAAGCTTACCAGGCAATTCTGATGGGGAAGCAAGGAAGGTAAACATAAACCAAGCTGGGTTTTCTGGAAGACTA
TGACTCAACCAAAGTTTATGGGCAAGGGAGCTCTCCACATGTGATATCATTTTTGAAGGCCGAGCCCTCAATTGGGAACT
CATAATTTAGCAAAAATTTCTAATTCTTTAGATGTTGGTCGCCATGTGTGGCTAGGGGCTCCCCATGATCACCTAATTAT
CCCTGTAAACCTTGAGGCAATCTAATAAAGTGTGGTTTACTGCTAAAGATTCT-------GTAATTTCACAACAAAAAAA
GCTGATATTTCTTTTTGCTACACAACACACACACAGTCTGGTGTATATTTCGCCCGCTAGGTTCTGAGGATGT-CTTCAA
GCAACCGAATGACGCTTGCAACTGGTATCTCTTCAGGACCATTGAATCTGGCACTGACGGCCCAGATGCGCATGGTCTGA
GAATCACAGGGCAGAGCGCAGTTGACAAACACGTGACCCTCCTTATCCATTAGTGA-------CGCGGCGCCTTCTCGTT
CGAGGGAGCTGCCGTGACCGGG--------AGGAAGCAAGGAGGCGAAGGAGCCACAGCAGCCATGGCTCCCGCCACTTC
CACCTCGCCGCTATCCCGCCTCCTGCTCAGCCTCCCGAAGCCCAACGCCCAGCCGCCCCTGTGCGCCAAGCCGCCGAGCG
CGGACTCCGGCGCGGGCGCCACCAGCAAGAACCTCGTCCTCCGCCGGCGCGAGGCCGCGGCAGCCGTCCTATCCGCCGCT
CTCCTCACACGCGTCCTCCCCGCAGCGGCCGCGGCAGATGAGTGCGCGCTCGAGGCGACCCCCTCGGGCCTCGCCTTCTG
CGACCGCGTCGTCGGCACCGGCGCCGAGGCCGTCAAAGGCCAGCTCATCAAGGTCAGTCGAATTCGAGCCCAACCTCCGC
CACAGTGATTAATTAAGTTCTTGATGCACGCGCTGGCTTAGCGTAGTTCCGGTAGTAGTCGCGGGCTGCACGCTGACCGG
TTTCGTCGTGGTTTGGCCATGGCGTGGCGCGCGCACTGCAGGCGCACTACCGGGGGATGCTGGAGGACGGCACGGTGTTC
GACAGCAGCTACGGCCGCGGGAGGCCGCTGACCATCATGGTGGGCGTGGGGGAGGTGATCAAGGGGTGGGACCTGTGCCT
CGCCGGCGGCGAAGGGATCCCGCCGATGAGAGTCGGTACGCGACGCCTCAGCCGAGCTCACGTCGTTCTGCTCTGAACT-
-GAATTCCCCGGTGTGAGTCGGTGCTCTGGTGTGGTTTTTCAGGTGGGAAACGGAGCCTGAGGCTGCCGCCGGAGCTGGC
CTACGGGGAGAAGGGGGCCGGGTGCAGGGGGTGGGAGCCCACCTCGTGCGTCATCCCGCCCAACTCCACGCTCCTCTTCG
ACGTCGAGTACGTCGGCAGGGCATCCTCCTGA-------TCGACCTATCCATCTATGAG----TCCATGATCAGGCCTTG
TATATGCCATCAGTTCGTACTAGAGGATTCATCGATTGATCGATCGACATTATATGTGGAGCGAGCAAAGACCGTGAATC
CTGAGATCAATATGTACAAC--------CTATTCTATTTCTATGATCCACGA----GTTTATGCATATACGAAACACTTT
ACCAGGTTTTCGCCAGGTAGTGCAACGAGCCGATACCGATTGCGGGTGCGCGCAGTGGGCTTTTTGGTAAT-CTGGATGG
TGCTCTTTCCCTTTTCCGCACCCTG---TATGTATGTAACGTTTTGCCAAACTGTTGTATTTTCGGTATGATAAGTAATG
AAAAGAGGGGGAGCCTTGTTCCACAAAAGGATT-----------------------------------------------
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------------------------------------------------------------------------ATACAACA
CTCTAAAGGGGACTATAATCAACCAGAGGCACATTTAGTGTCTCTCCTGAACTTAGCCTCTATGTTTCATCGCCTACTTG
GGCGAACGGCCATCCACTGCCTCCTTCTCCCATTCCGTCCGACCCATTTCCTCCCATCGCCAGCGGCGCCGGTGTTATGG
CGACGACAATGGTGCTGAGTTTGGTGGGTGAGAGGTATGGGTCTTATCTTGGTTATCAGTAGACAT----------GTGG
TGCCATACTAGTGACCGGAGCCACACCGATGCCCAGTAAATCTCGTTACATGGTTATTTGGGTTACTATCGCTACCGGAG
GCAGTGGATAGCGTCTGTGGTGGATCTCCTATTGATCTGTGGGCAAGCTCATGAAACACATCTAGTGGTGCATCTTGTTT
GCAAATCTAAAGATGTTCCTCAGAGTAATAGTTTTATTGAGAAAGAAATCTGTGTGAGCATTGTTAAACAGGTGGAATTT
GCTGCCGAGTATGTTTTTCCCTTCTCTTTATAGAACTTAATTTCTAAGGACGTAACACCCTTGAGCATAGGAAAAATTGA
CACTGTTATACAGCTTGCTGATAGATCCTAAGTGTACCCTGTTAGAATTCTGAAAGATGTTGAAGTCT
>chr7D_604
ATGTGC--------------------------------------------------------------------------
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-------------------------------------------------GGCTAGGGGCTTCCCATTATCACCTAATTAT
CCCTGTAAACCTTGAGACAATCTAATAAAGTGTGGTTTACTGCTAAAAATATAAAAAACGGTAATTTCACAA-AAAAAAA
ACTGAGATTTCTCTTTGCTACACAACACA--CACAGTCTGGTGTATATTTCGCCTGCTAGGTTCTGAGGATTT-CTTCAA
ACAACCGAATGACGCTTGCATCTGGTATCTCTTCACGACCATTGGATCTGGCACCGACGGCCCAGATGCGCATCGTCTGA
GAATCACACG-------GCAGTTGACAAACACATGACCCTCCTTATCCATTAGTGAGTAGTGACGCGGCGCCTTCTGGTT
CGAGTGAGCTGCCTTGACCGAG--------AGGAGGC---------AAGGAGCCACAGCAGCCATGGCTCCCGCCGCTTC
CACCTCGCCGCTCTCCCGCCTCCTGCTCAGCCTCCCGAAGCCCAACACCCGGCCGCCCCTCTGCGCCCAGGCGCCGAGCG
CGGACTCCGGCGCGGGAGCCAGCACCAAGAACGTCGTCCTCCGCCGGCGCGAGGCCGCGGCAGCCGTCCTGTCCGCCGCT
CTCCTCTCACGCGTCCTCCCCGCAGCGGCCGCCGCAGATGAGTGCGCGCTCGAGGCGACACCGTCCGGCCTCGCCTTCTG
CGACCGCGTCGTCGGCACCGGCGCCGAGGCCGTCAAAGGCCAGCTCATCAAGGTCAGTCGAATTCGCGCCCAACCTCCGC
CACAGTGATTAATTAAGTTCTTGATGCACGCGCTGGCTTAGCGTAGTTCCGATAGTAGTCGCGGGCTGCACGCTGACCGG
TTTCGTCGTGGTTTGGCCATGGCGTGGCGCGCGCACTGCAGGCGCACTACCGGGGGATGCTGGAGGACGGCACGGTGTTC
GACAGCAGCTACGGCCGCGGGAGGCCGCTGACCATCATGGTGGGCGTGGGGGAGGTGATCAAGGGGTGGGACCTGTGCCT
CGCCGGCGGCGAAGGGATCCCGCCGATGAGAGTCGGTACGCGACGCCTCAGCCGAGCTCACGTCGTTCTGCTCTGAACT-
-GAATTCCCCGGTGTGAGTCGGTGCTCTGGTGTGGTTTTTCAGGTGGGAAGCGGAGCCTGAGGCTGCCGCCGGAGCTGGC
CTACGGGGAGAAGGGGGCCGGGTGCAGGGGGTGGGAGCCCACCTCCTGCGTCATCCCGCCCAACTCCACGCTCCTCTTCG
ACGTCGAGTACGTCGGCAGGGCATCCTCCTGAGTCATGATCGACCTATGCATC----TATGTATCCATGATCAGGCCTTG
CATATGCCATCAGTTCGTCGTAGAGGATTCATCGAT----CGATCGACATTATATGTGGAGCGAGCAAAGACCGTGAATC
CTGAGATCAATATAAACAACTACTCCTACTAGTTTATTTCTATGAATCACTAGTACGTGTATGTATATACGAAACACTTT
ACCAGGTTTTCGCCACGTAGTGCACAAG-------CCGATTGCGAGTGTGCGCAGTGGGTTTTCTGGTAATACTGGAAGT
TGCTTTTTCCCTTTCCCGTCCCGCACCCTATGTAT-----GTTTTGCCAAACTGTTGTATTTCCATTATGATAAGTAATG
AAAAGTAGGGGAGCCTTGTTCGACGAAAAGATT-----------------------------------------------
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------------------------------------------------------------------------ATACAACA
CCCAAAAGGGGGCTATAATCAATCAGAGGCATATTTAGTGTCTCTCGTGAACTTAGCCGCTATGTTTCATC----ACTTG
GGCGAACGGCCATCCACTGCCTCCTTCTCCCATTCCGTCCGACCCATTTCCTCCCATCGCCAGCGGCCGCGGTGTTGTGG
CGACGACAATGGTGCGGAGTTTGGTGGGTCAGAGGTATGGGTCTTATCTTGGTTATCAGTAGATAT----------GTGG
CACCATACTAGTGACCGGAGAAGCGCTGATGCCCGTTAAATCTCGTTACATGGTTATTTGGGTTACTATCGCTACCGGAG
GCAGTGGACAGCGTTTGTGATGGATCTCCTACTGATCTGTGGGCAAGGTCATGAAACACATGTGGTGGTACATCTTGTTT
GCGAATTTAAAGATGTTCCTGAGAGTAATAGTTCTTCTGAGAAAGAAATCTGTGTGAGCATTGTTAAGCAGGTGGAATCT
GCTGCCGAGTA---------------------------------------------------------------------
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>chr7B_721
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-------TTTGTTTTTGCTACACAACACACACACAGTCTGGTGTATATTTCGCCCGCTAGATTCTGAGGATGTCCTTGAA
ACAACCGAATGACGCTTACATTTGGTAGCTCTTCCCAACCATTGGATCCGGAACCGACGGCCCCGGTGAGCATCGTCTGA
AAATCACACGGCAGAGTGCAGTTGAGAAACACGTGACCCTCCTTATCCATTAGTG-------ACGCGGCGCCTTCCGGTT
CGAGTGAGCTGCCGTGACCGAGAGGAACCAAGGAGGC---------AAGGAGCCACAGCAGCCATGGCTCCTGCCGCTTC
CACCTCGCCGCTCTCCCGCCTCCTGCTCAGCCTCCCGAAGCCCAACGCCCAGCCGCCCCTCTGCGCCCAGGCGCCGAGCG
CGGACTCCGGTGCGGGCGCCACCAGCAAGAACCTCGTCCTCCGCCGGCGCGAGGCCGCGGCCGCCGTCCTGTCCGCCGCT
CTCCTCTCACGCGTCCTCCCGGCAGCGGCCGCCGCAGATGAGTGCGCTCTCGAGGCGACCCCCTCCGGCCTCGCCTTCTG
CGACCGCGTCGTCGGCACCGGCGCCGAGGCCGTCAAAGGCCAGCTCATCAAGGTCAGTCGAATTCGCCCCCGACCTCCGT
CACAGTAATTAATTAGGTTCTTGATGCACGAGCAGGATTAGCGTAGTACAGGTAGTAGTCGC-GGCTGCACGCTGACCGG
TTTCG---TGGTTTGGCCATGGC-----------ACTGCAGGCGCACTACCGGGGGATGCTGGAGGACGGCACGGTGTTC
GACAGCAGCTACGGCCGCGGGAGGCCGCTGACCATCATGGTGGGCGTGGGGGAGGTGATCAAGGGGTGGGACCTGTGCAT
CGCCGGCGGCGAGGGGATCCCGCCGATGAGAGTCGGTACGCGACGCCTCAGCCGAGCTCACGTCGTTCTGCTCTGAACTG
TGAATTCCCCGGTGTGAGTCGGTGCTCTGGTGTGGTTTTTCAGGTGGGAAGCGGAGCCTGAGGCTGCCGCCGGAGCTGGC
CTACGGGGAGAAGGGGGCCGGGTGCAGGGGGTGGGAGCCCACCTCCTGCGTCATCCCGCCCAACTCCACGCTCCTCTTCG
ACGTCGAGTATGTCGGCAGGGCATCCTCCTGA-------TCGACCTATCCATCTATATATGTATCCATGATCAGGCCTTG
CGTATGCCATCAGTTCCTCGTAGAGGATTCATCGAT----CGATCGACATTATATGTGGAGCTAGCAAAGACGGTGAATC
CTGAGATCAATATGTACAAGTT---------GTTTATTTCTATGATCCACTA----GTGTATGCATATACGAAACACTTT
ACCAGGTTCTCGCCGCGTAGTGCACGAG-------CTGATTGCGGGTGCGCGCAGTGGGCTTTTTGGTAATACTGGAAGG
TTCTCTTTCCCTTTCCCGCACCCTG---TATGTAT-----GTTTTGCATAATTGTTGTATTTCCATTATGATAAGTAATG
AAAAGTAGGGAAGCCTTGTTCGACCAAAAGATTATGGGAAATGTTTGTGGCCGGTGTGCCGGCCGAAGATTGGGCCGGTC
ACACGCGGCACGTACGATGAAAGAGAGATCGAGTGGTCCCTGGTACTCTTGCGACGACGTGTTCTGTGGGACCCGTGCAC
CGCTCGCTCTCCCTTTCTTATCCATCCACGCTCTGCCTCGACTGTTTCTCTCCCCCTCAATCTCCCCTCTTCCTCTCTGT
CTCTTCTCCCGTGCAGCAGCCATGAACTTGTCTGCTCCATCCCGTGTGAGTTCGCTGCCGCGGAACAGCTCGGAGGCCGT
TGCCACGAGCACCTCCACAGCGACCACAAGAAACCGAGGCGGCTGCAACTCCGACGACCCTCCTCCTCTCCCCCTCCCCC
GGTACCCCGCACAGCAGCCATGGCGGAAGAAGATCTGCCCGATTTTTTGCGCCAACCGGTTGTAGCTTTTTGAATAGCCG
GTTGTAGCTTCTGCTAAACTGGTTGCATTCTTTTGGAATCATTTCGTACAAACATTTTTCTTCAACTCCAGATTTTTGCT
TCCATGTTTGTTTTTGCTGGAACCAGTGTACTAATTTGTTACCACCGTCTTCGTTTTTTGCTGGAACTAACCAAAATTTG
CTGCCATCTTTTTTTGCTGGAATCATTTTGCTACAACCATTTTGTGGTTTGATGCAACCAGTGTCATTTTTTGCTACCAT
CGGCTTCTTGATTTTTCTGGAACCAGTGCTTGATTTTTTCATTTTTGCTACCATTAGCGTTTCGATTTCCTGGAACAAGC
TTTAATTTTTGCTACCATCAGATTTTTGGTTTGTTGGAACGGCGTCGATTTTTTCCAATTTTGCTGCCAATGTTTTATTG
GTTTTTGCTGGAACCGTCAAGAATTTTTGCTACGACCGGTGGAATTTTTTTGCTTCGACCGGCAAATTAAGGACGAGGAA
CAACATGAGCTCCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNCCGGAGGTGCGCCGCGGGGGCCTTGCTAGGCTGCGCGGTGCTGCGAGACACGGGGGATCTCGCC
GGAGATGCGCCACGGGGGGCCGAGGAAGAAGAAGCTGGGGCAATTTTTTTTGGTCCAGATCCAACCGCCCGCGCGGCTCG
CATCGAGCGGCTATGGCTGGACCGGCCGAAAGTTTCGGCCGGTGCGCCGGTGCCTAGCGGTGCCCAAAGATTATACAGCA
CCCTAAAGAGGGCTATAATCAATCAGACG-------AGTGTCTCTCCTGAACTTAGCCTCTATGTTTCATCGGCTACTTG
GGCGAACGGCCATCCACTGCCTCCTTCTCCCATACCGTCCCACCCATTTCCTCCCATCGCCAGCGGCGGCGGTGTTGCGG
CGACGACAATGGTGCTGAGTCTGGTGGGTGAGAGGTATGGGTCTTATCTTGGTTATTATCAGTAGACAGGTGGGCGGTGG
CGCCATACTAGTGACCGGAGCTGCACATATGCCCGGTAAATCTCGTTACATGGTTATTTGGGTTATTATCGCTACAGGAG
GCAGTGGACAGCGTTTGTGATGGATCTCCTATTGATATGTGGGCAAGCTCATAAAACACATGTCGTGGT-----------
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>SNPs
SSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------S-----S-------------
----------------S------------------------------S--SSS-------------------S-------
S----S--------------------------------------------------------------------------
S-------------------S--------------S--------S---------S------------------S------
--------S-------S-----------------------------------------------------------S---
----S---------------S-------------S--SSSSSSSSS-----------------------------S----
------------S-----------------------------------------------S------S--S---------
----------------------------------------------------------------------S---------
------S-------------------------S--------------------------------S--------------
------------------------------------------------------------------S-------------
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--------------------------------------------------S-----------------------------
---------------------------------------------S----------------------------------
--------------------------------------------------------SSS---------------------
S-----------------SS----------------SSSS----------------------------------------
-------------------------------S-S----------------S-------S---------------------
---------------S--------SSSSSSSSSSS------------------------------------------S--
--------------S--------------------SSSSS----------------------S-SS--------------
-----SS--------------S--S---S---------------------------------------------------
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-S---------S----------S--------S----------------------------------------S-------
--------------------------------------------------------------------S-------S---
---------------------------------------------------------------S----------------
S--------------------SS---S-------S---------------------------------------------
--------S-----S----S-----------------------------------------S-S-----S----------
--S---S-------------S------------S-SS------------------------------S----------S-
-----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_433
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-------------ACCAGGCAATTCTGATGGGG-----------------------------------------------
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>reverse_2096
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---------------GGTAGTGCAACGAGCCGATA---------------------------------------------
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