>input_sequence_67253
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-------------------------------CCTGGTTGTGCTTGGTGGGCGGCCATGGACGTGACCTTCGTGTGCTCGT
---CGTCGGGGGAGGCGCCGTTCAAGATGGAGGTGGGCTTCTTCGACACCGTCATGGACATCAAGCAGAAGCTCCAGGGG
CGCAACGGGTGGCCCGCCGCCGCGCTGTCCCTCTTCCACGACGGCGGCGCGCTCGTGGACGACGACGACGCCGGCGCCGC
CGGCGTCACCGAGCGGTACGGCGTCGTGGAGGGCTCCGTCATCCACGTCGCCCT------------CGACGGCGACGACA
GGCGGCCGCGTCAG---GAGAAGAAGAGTGGGGTCAGGAGGCCAAAGGCCCGGCGAGACGGCGTCGCCGCGCCGGCGCCG
GCGCCGCTGCGGGTGACGGTGGTGTCGCGGTGCGGCGCGGGGCGCGTGGAGGTGGCGGTGCGCGCGCGGGGGGCGGTGTC
GGCGCTGCGCGGGGAGCTGGAGCGGGGCGCGGCGTCCGGGTCCGGGTTCCCGCTGCCGCCGGGCGGCGGCTACTTCTTCA
TACACGGGCAGAGCGTGATGGACGAGGCGCGGTCGTTCGAGTGGCATGGCGTGGCCGCCGGCGACGAAGTCGTCGTCTTC
GAGGGCTCCGTCACCAGAGCGCCGGCGTGCTGAACGGGCGCCTGGACTGGACTGCAAATCTGTTAGCGCGGGAAGCTTTT
TTTTCAAACTAGAAGCTCTCTTGCATCAAACAACTTA--CCCAAGACGAAAAATCGTAACTTCAAACTACTGAGTAGGAG
TATGTCATTATTTTTTAGGATAATTTTTTGAATTTTGAATCTACCTTCTTCTTGCATGTTTTGTCCACCAAATTACACAA
TGAATTCATTTG-TAGCCG-------------------------------------------------------------
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>chr5A_1_TraesCS5A01G258000
GCTGCGGGCGGACAACCATGTCGACGAGTTCGTCTGGCACGAGATGGCGCTGCTGAAGGCAACGCTGCTCGAGACGAGGG
CGAAGCTGCTGGTGCGAGGCGGGTTGTTTGACAGCGCGGAGGAGCTGTGCAGGACCTGCGTCAGCATCAGGACGGTCATG
CTTGGCCACGACCATGCCCAGACATTGGCGGCTCAGGAGACGCTGGCGAAGGTGGTTAGGTACCGGAGTAAAATCTGAGA
CGACGCGGAACCGTGCGAGCTGTTCGACATAGGCAGTATCTAGATTTTGTATCTTGTTCTTTGCTGTGTCTGTGATTCAC
TACTCGACATTCCTTATCGCGACACTTTTTTTGTTAGATCACTGAGATAGCTAGTCTGATTATGATCTGAGATCATGTGT
AACTTGACAACT--TATTTAACCAACTTGCTGCGTACAGTCCAGTCTCCTAAATCTAGCTATGAATTTTGTTTGATGAAA
TTCTGAGCAAAT--TGGATGAATTCTCTAATGACACATGTGACCTGGAGATGTTATGTGCT-------------------
-----AGTAGAAACTAGTGTTTGTTTTTGCTGAACATTTTACTCCTAGAAGAGACTGTAACTCCAGTGAAGGATATTTAG
CAAGGGATCTGTGATTTGTGACCCCTTGTGCAACTGATTGATGCAATGCA-------GTCTTCCCTTGCAATTCCGATGC
TGAATTTAGTCTGTCATATCACCAGCAAAGTTCTCCTGCACAGAGTAGCAGACATG---ATGAACAATCAAGAGCAAAAA
CTGCTTCTTCCTTATCGCAAACGATCTAGCTGACACGCCGATTTTGTGAGATGGATGGGGAAACGAAGGCCGTTCTGCGT
GATTAGCAGCAAGTTGAGGAATCTTGATCATGCATCAAGTCTGAACT-------GCCCTCAGCTCTCTGCAG--------
-----------TCACTGGAAATTCATGCTGGTTGGCAACAGATCA----AATGC-TCACACGCAGTGCATTCTCAT--CC
ATGATATAAATGTCATGCCATGGCATGCTTGCCTGGTTGTGCTTGGTGGGCGGCCATGGACGTGACCTTCGTGTGCTCGT
---CGTCGGGGGAGGCGCCGTTCAAGATGGAGGTGGGCTTCTTCGACACCGTCATGGACATCAAGCAGAAGCTCCAGGGG
CGCAACGGGTGGCCCGCCGCCGCGCTGTCCCTCTTCCACGACGGCGGCGCGCTCGTGGACGACGACGACGCCGGCGCCGC
CGGCGTCACCGAGCGGTACGGCGTCGTGGAGGGCTCCGTCATCCACGTCGCCCT------------CGACGGCGACGACA
GGCGGCCGCGTCAG---GAGAAGAAGAGTGGGGTCAGGAGGCCAAAGGCCCGGCGAGACGGCGTCGCCGCGCCGGCGCCG
GCGCCGCTGCGGGTGACGGTGGTGTCGCGGTGCGGCGCGGGGCGCGTGGAGGTGGCGGTGCGCGCGCGGGGGGCGGTGTC
GGCGCTGCGCGGGGAGCTGGAGCGGGGCGCGGCGTCCGGGTCCGGGTTCCCGCTGCCGCCGGGCGGCGGCTACTTCTTCA
TACACGGGCAGAGCGTGATGGACGAGGCGCGGTCGTTCGAGTGGCATGGCGTGGCCGCCGGCGACGAAGTCGTCGTCTTC
GAGGGCTCCGTCACCAGAGCGCCGGCGTGCTGAACGGGCGCCTGGACTGGACTGCAAATCTGTTAGCGCGGGAAGCTTTT
TTTTCAAACTAGAAGCTCTCTTGCATCAAACAACTTA--CCCAAGACGAAAAATCGTAACTTCAAACTACTGAGTAGGAG
TATGTCATTATTTTTTAGGATAATTTTTTGAATTTTGAATCTACCTTCTTCTTGCATGTTTTGTCCACCAAATTACACAA
TGAATTCATTTG-TAGCCGTCCACTTTATCAGATCGAACGGCCCACATTACCCGGATTCGCCACCCACCTATTCCCGCCA
AAGGCTGAGAACTCAGACGCCTCTTCTGGAAAACTCTACAACCCACGCTCGCCTTCAGCAAATCGATTCCC-TCCAAGGC
TCCAGCAAACCAATTCCCCGCCAAGGCGC-AACCTCGCTCACTTCACCACCACATACATATGCTCTGTATGAAATTTCTC
TAGCGTGTACGTCACACACCGCGATCTCCGTCAGTTCATACCCGCCGTCCACGCCC-CCAGTTCCTTCCAATCACGTCAA
CATCCAGATTGCAGCTCCGCCATCGTCTCCTTGCAAGCTTTGTCTTGGTTCGAATTTTCTTGCTGCCTGTTGAGTCCAGG
TTCATGAGAGCTGGACGTCCTACTACAACCAGCTGACTATAGTGCCACCGACGGATTGACCACAAGTGAGCTATTCCTTC
TCTAGGTGGCCCATCCTAATCTGTTCCTTTGGAATTCTGTGATGATTCTTTTGCGTGCGAATGTTACGCAAGTGATCCTT
CTTGCTATCAATT-ATATGAAATACATATTCACTGGTCTGACTGTAGCTGTTGA--TTTTTCTGCTTTTCTTGCACGCAA
GGTGTTTGTGCTTTTGTCCAAGCAGCTATCTGTTGGTAGACTATAAAA-GGCAGTGCTATTCTGAACATAAAGCACATGT
TCATTCTGTTCATGTCTCATATCCGTTGGCAAATTTGAGTATGCTTTAATTATTTTTCTCGGATTTGGCAAGCT-AA-AA
ATGGTCTAATGCTTATATACTGTAGGTTGTGGCTGAAAATACCTGGCTTATAACAATCAAGAATCAAAGTAATAACCGCT
AGCCGTCCAGTAAAACCCAATAGATGGAAGGCCGAGTTCCTTTCAGAGATATTACAAATGTTCACTCGACGACTTCACCA
AAAGGGAACCAACGTATGTTTTTTTAT-T--ACCGATATCTTCTTATTATTATCCTTATTGATCGCTTGCC
>chr5D_1
GCTGCGGACAGACAACCATGTCGACGAGTTCGTCTGGCATGAGATGGCACTGCTGAAAGCAACGCTGCTCGAGACGAGGG
CGAAGCTGCTTGTGCGAGGCGGGTTGTTTGACAGCGGGGAGGAGCTGTGCAGGACCTGCATCAGCATCAGGACGGTCATG
CTTGGCCACGACCATGCCCAGACATTGGCGGCTCAGGAGACGCTCGCAAAGGTGGTTCGATACAGGAGTAAAATCTGAGA
TGGCGCGGAACCGTGCGAGCTGTTCGACATAGGCAGTATCTAGATTTTGTATCTTGGTCTTTGCTGTGTCTGTGATTCAC
TACTCGACATTCCTTATCGCGACACTTTTTTTGTTAGATCACTGAGATAGCTAGTCTGATTATG-----AGATCATGTGT
AACTTGACAACT--TATTTAACCAACTTGCTGTGTACAGTCCGGTCTCCTAAATCTACCTATGAATTTTCTTTGATGAAA
TTCTGAGCATTTTATGGATGAATTATCTAATGACACATGTGACCTGGAGATGTTTTGTGCTACTCCATTGT---------
-----------------------TTTTTGCTGAAGATTTTACTCCTAGAAGATAATGTAACTCGAGTGAAGAATATTTAG
CAAGGGATCTGTGATTTGTGACCCCTTGTGCAACTGATTGATGCAATGCAGCCTTGAGTCTTCCCTTGCAATTCTGATGC
TGAATTTAGTCTGACATTTCACCAGCAAAGTTCTCCTGCACAGAGTAGCAGACATG---ATAAACAATTGAGAGCAAAAA
CTGCTTCTTCCTTATCGCAAACAATCTTGTCGGCATGCCGATTTTGTGAGATGGATGGGGAAACGAAGGTCGTTCTGCGT
GATTAGCAGCAAGTTGAGGAATCTTGATCATGCATCAAGTCTGAACT-------ACCCTCAGCTCTCTGCA---------
----------CTCACTGAAAATTCATGCTGGTTGGCAACAGACAGATCCAATGTTTCACACGCAGTGCATTCTCAT--CC
AAGGTATAAATGCCATGCCATGCCATGCTTGCCTGGTTGCGCTGGGTGGGCGGCCATGGACGTGACCTTCGTGTGCTCGT
---CG---GGCGAGGCGCCGTTCAAGATGGAGGTGGGCTTCTTCGACACCGTCCAGGACATCAAGCACAAGCTCCAGGAG
CGCAACGGCTGGCCCGCCGCCGCCCTGTCCCTCTTCCACGACGGCGACGCGCTCGTGGACGACGACGGCGCCGGCGCCGC
CGGCGTCACCGAGCGGTACGGCGTCGTGGAGGGCTCCGTCATCCACGTCGCCCT------------CGACGGCGACGACA
GGCGGCCGCGTCAG---GAGAAGAAGAGTGGGATCAGGAGGCCAAAGGCCAGGCGGGACGGCGTCGTC------GCGCCG
GCGCCGCTGCGGGTGACGGTGGTGTCGCGGTGCGGCGCGGGGCGCGTGGAGGTGGCGGTGCGCGCGCGCGGCGCTGTGTC
GGCGCTGCGCCGGGAGCTGGAGCGGGGCGCGGCGTCCGGGTCCGGGTTCCCGCTGCCCGCGGACGGCGGCTACTTCTTCA
TACACGGGCAGAGCGTGATGGACGAGGCGCGGTCGTTCGAGTGGCACGGCGTGGCCGCCGGCGACGAGGTCGTCGTCTTC
GAAGGCTCCGTCACCAGGCCCCCGGCGTGCTGAACGGGCGCCCGC-CTGGACTGCAAATCTGTTAGCGCGGGAAGATTTT
TTCAAACTTTG------CTTTTGCATCAAACAACTTTACCCCAACACCAAAATTCGTAGCTTCAAACTACT---------
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>chr5B_1
GCTGCGGGCGGACAACCATGCCGACGAGTTCATCTGGCATGAGATGGCACTGCTGAAAGCAACGCTGCTCGAGACGAGGG
CGAAGCTGCTGGTGCGAGGCGGGTTGTTCGACAGCGGGGAGGAGCTGTGCAGGACCTGCATCAGCATCAGGACGGTCATG
CTTGGCCACGACCATGCCCAGACATTGGCGGCTCAGGAGACGCTCGCAAAGGTGGTTAGATACAGGAGCAAAATCTGAGA
TGACGCGGAACCGTGCGAGCTGTTCGACATAGGTAGCATCTAGATTTTGTATCTTGTTCTTTGCTGTGTCTGTGATTCAC
TACTCGACATTCCTTATCGCGACACTTTTTTTGCTAGATCACTGAGATAGCTAGTCTGATTATG-----AGATCATGTGT
AACTTGACAACTTATATTTAACCAACTTGCTGTGTACAGTCCAGTCTCCTAAATCTACCTATGGATTTTCTTTGATGAAA
TTCTGAGCAAAT--TGGATGAATTCTCTGATGACACATGTGACCTGGAGATGTTATGTAACGTTCTTATATTTCTTTACA
GAGGGAGTAGTAACTAGTGTTTGTTTTTGCTCAACACTTTACTCCTAGAAGATAATGTAACTCCAGTGAAGAATATTTAG
CAAGGGGTCTGTGATTTGTGACCCCTTGTGCAACTGATTGATGCAATGC-------AGTCTTCCCTTGCAATTTTGATGC
TGAATTTAGTCTGGCATTTCACCAGCAAAGTTCTCCTGCACAAAGTAGCAGACATGATAATAAACAATCAAGAGCAAAAA
CAGCTTCTTCCTTGTCACAAACAATCTAGTCGGCACGCCGATTTTGTGAGATGGGTGGGGAAACGAAGGTCGTTCTGCGT
GATTAGCAGCAAGTTGAGGAATCTTGATCATGCATCAAGTCTGAACTCTGAAGTACTCTCAGCCCTCTGCAGAAGGCTAA
TGGATGGATGCTCACTGAAAATTCATGCTGGTTGGCAACAGACAGATCGAATGC-TCACACGCAGTGCATTCTCTCAGCC
ATGATATAAATGCCATGCCATGCCATGGTTGCCTGGTTGTGCTGGGTGGGCGGCCATGGACGTGACCTTCGTGTGCTCGT
CGTCG---GGGGAGGCGCCGTTCAAGATGGAGGTGGGCTTCTTCGACACCGTCCTGGACATCAAGCACAAGCTCCAGGGC
CGCAACGGCTGGCCCGCCGCCGCCCTGTCCCTCTTCCACGACGGCGGCGCGCTCGTGGACGACGACGCCGCCGGCGCCG-
--GCGTCACCGAGCGGTACGGCGTCGTGGAGGGCTCCGTCATCCACGTCGCCCTCGACGGCGCCGGCGACGGCGACGACA
GGCGGCCGCGTCAGAAGGGGAAGAAGAACGGGACCAGGAGGCCGGGCAAGGGCATGCGG---------GCGCCGGCGCCG
GAGCCGCTGCGAGTGACGGTGGTGTCGCGGTGCGGCGCGGGGCGCGTGGAGGTGGCCGTGCGCGCGCGCGGCGCGGTGTC
GGCGCTGCGCCGGGAGCTGGAGGGGGGCGCGTCGTCGGGGTCCGGGTTCCCGCTGCCCGCGGACGGCGGGTACTTCTTCA
TACACGGGCAGAGCGTGATGGACGAGGCGCGGTCGTTCGAGTGGCACGGCGTGGCCGCCGGCGACGAGGTCGTCGTCTTC
GAGGGCTCCGTCACCAGGGCGCCGGCGTGCTAAACGGGCGCCCGC-CTGGACTGCAAATCTGTTAGCGCGGGAAGCT---
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>chr3D_1769
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-------------------ATAATTTTTTGAATTTTGAATCTACCTTCTTTTTGCATGTTTTGCCCACCAAATTACATAA
TGGATTCATCTT-TAGCCGTCCACTTTATCAGATCGAACGGCCCATATTACCCGGATTTGCCACCCACCTATTCCCGCCA
AAGCCTGAGAACTCAGTCGCCCCTTCTGGAAAACTCCACAACCCACGCTCGCCTCCAGCAAATCGATTCCCCACCAAGGC
TCCAGCAAATCGATTCCCCGCCAAGGCGCCAGCCTCGCTGACTTCACCACCACATCCATATGCTCTGTATAAAATTTCTC
TAGCGTGTACGTCACGCACCATGATCTCCGTCAGTTCATAACCGCCGTCCATGCCC-C-AGATCCTTCGAATCACCTCAA
CATCCAGATTGCAGCTCCACCATCGTCTCCTTGCAAGCTCTGACTTGGTTCAAATTTTCTTGCCGCCTGGTGAGTCCAGG
TTCATGAGAGCTGGACATCCTACTACAACCAGCTCACCATAGTGCCATCGACGGACTGACCACAAGTGAGCTATTCCTTC
TCTAGGTGTCCCATCCTAATCTGTTCCTTTGGAATTCTGTGATGATTCTTTTGCATGCGAATGTTGCACAAGTGATCCTT
CTTGCTATAGATTTATATGAAATACATAGTCACTGGTCTG-CTGTAGTTGTTGA-CATTTTCTGCTTTTCTTGCACGCAA
GGTGTTTGTGCTTTTGTCCAAGTAGC--TCTGTTGGTAGACTATAAAA-GGCAGTGCTAT-CTGAATATAAAGCACATGT
TCATTCTGTTCATGTCTCATAGCTGTTTGCAAATTTGAGTATGCTTTAATTATTTTTCTCGGATTTGGCAACCTAAA-AA
ATGGTCTAATGCTTATATACTGTAGGTTGTGGCCGAAAACACCTGACTTATAACAATCAAGAATCAAAGTCATAACCGCG
AGCCGTCCAGTAAAACCCAAGAGATGGAAGGCCGAGCTCCTTTCAGAGATATTACAAATGTTCACTCCACGACTTCACCA
AAAGGGAAGCAACGTACGTTGTTTTTATTAAACCGATATCTTCTACTTATTATCCTTATTGATCGCTTGCC
>chr3D_1769
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-------------------ATAATTTTTTGAAATTTGAATCTACATTCTTCTTGCATGTTTCGCCCACCAACTTACATAA
TGGATTCATCTT-TAGCCGTCCACTTTATCAGATCGAACGGCCCACATTACTCGGATTCGCCTCCCACCTATTCCCGCCA
AAGCCTGAGAACTCAGTGGCCCCTTCTGGAAAACTCCACAACCCACGCTCGCCTCCAGCAAATCGATTCCCCACCAAGGC
TCCAGCAAATCGATTCCCCGCCAAGGCGCCAGCCTCGCTGATTTCACCACCACATCCATATGCTCTGTATAAAATTTCTC
TAGCGTGTACGTCACACACCATGATCTCCGCCAGTTCATAACCGCCGTCCACGCCC-C-AGATCCTTCGAATCACCTCAA
CATCCAGATTGCAGCTCCACCATCGTCTCCTTGCAAGCTCTGACTTAGTTCAAATTTTCTTGCCGCCTGGTGAGTCCAGG
TTCATGAGAGCTGGACATCCTACTACAACCAGCTCACCATAGTGCCATCGACGGACTGACCACAAGTGAGCTATTCCTTC
TCTAGGTGTCCCATCCTAATCTGTTCCTTTGGAATTATGTGATGATTCTTTTGCATGCGAATGTTGCGCAAGTGATCCTT
CTTGCTATAGATTTATATGAAATACATAGTCACTGATCTG-CTGTAGTTGTTGA-TTTTTTCTGCTTTTCTTGCCCGCAA
GGTGTTTGTGCTTTTGTCCAAGCAGC--TCTGTTGGTAGACTATAAAA-GGCAGTGCTAT-CTGAATATAAAGCACATGT
TCATTCTGTTCATGTCTCATAGCTGTTTGCAAATTTGAGTATGCTTTAATTATTTTTCTCGGATTTGGCAACCTAAA-AA
ATGGTCTAATGCTTATATACTGTAGGTTGTGGCCGAAAACACCTGACTTATAACAATCAAGAATCAAAGTCATAACCGCG
AGCCGTCCAGTAAAACCCAAGAGATGGAAGGCCGAGCTCCTTTCAGAGATATTACAAATGTTCACTCCACGACTTCACCA
AAAGGGAACCAACGTACGTTGTTTTTATTAAACCGATATCTTCTACTTATTATCCTTATTGATCGCTTGCC
>chr6A_1771
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---------------------AATTTTTTGAATTTTGAATCTACCTTTTTCTTGCATGTTTTGTCCATCAAATTACACAA
TGGATTCATTTG-TAGCCGTCCACTTTATCAGATCGAACGGCCCACATTACCCGGATTCGCCACCCACCTATTCCCGCCA
AAGGCTGAGAACTCAGACGCCTCTTCTGGAAAACTCTACAACCCACGCTCGCCTCCAGCAAATTGATT-CCCGCCAAGGC
TCCAGCAAATCAATTCCCCGCCAAGGCGC-AACCTCGCTCACTTCACCACCACATCCATATGCTCTGTATGAAATTTCTC
TAGCGTGTACGTCACACACCGCGATCTCCGTCAGCTCATACCCACCGTCCACGCCCCC-AGTTCCTTCCAATCACGTCAA
CATCCAGATTGCAGCTCCGCCATCGTCTCCTTGCAAGCTTTGTCTTGGTTCGAATTTTCTTGCTGCCTGTTGAGTCCAGG
TTCATGAGAGCTGGACATCCTACTACAACCAGCTGACCATAGTGCCACCGACGGATTAACCACAAGTGAGCTATTCCTTC
TCTAGGTGGCCCATCCTAATCTGTTCCTTTGGAATTCTGTGATGATTCTTTTGCGTGCGAATGTTACGCAAGTGATCCTT
CTTGCTATCAATT-ATATGAAATACATATTCACTGGTCTGACTGTAGCTGTTGA--TTTTTCTGCTTTTCTTGCACGCAA
GGTGTTTGTGCTTTTGTCCAAGCAGCTATCTGTTGGTAGACTATAAAA-GGCAGTGCTATTCTGAACATAAAGCACATGT
TCATTCTGTTCATGTCTCATATCCGTTTGCAAATTTGAGTATGCTTTAATTATTTTTCTCGGATTTGGCAAGCT-AA-AA
ATGGTCTAATGCTTATATACTGTAGGTTGTGGCTGAAAATACCTGGCTTATAACAATCAAGAATCAAAGTAATAACCGCT
AGCCGTCCAGTAAAACCCAATAGATGGAAGGCCGAGTTCCTTTCAGAGATATTACAAATGTTCACTCGACGACTTCACCA
AAAGGGAATCAACGTACGTTTTGTTAT-T--ACCGATATCTTCTACTTATTATCCTTATTGATCGCTTGCC
>chr2D_1771
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---------------------AATTTTTTGAATTTTGAATCTACCTTCTTCTTGCATGTTTTGCCCATCAACTTACATAA
TGGGTTCATCTGATAGCCGTCCACTTTATTAGATCGAACGGCCCACATTAACCGGATTCGTCACCCACCTAATCCCGCCA
AAGCCTGA--ACTCAGTCGCCCCTTCTGGAAGACTCCACAACCCACGCTCGCCTCCAGCAAATCGATTCCC-GCCAAGGC
TCCAGCAAATCGATTCCCCGCCAAGGCGC-AGCCTCGCTCACTTCACCACCACATCCATATGTTCTGTATGAAATTTCTC
TAGCGTGTACATCACACACCACGATCTCCGCCAGTTCATAACCGACGGCCACGCCC-CCAGCTCATTCCAATAACCTCAG
CGTCCAGATTGCAGCTTCACCACCATCTCCTTGCAAGCTCTGACTTGGTTCGATTTTTCTTGCCGCCTGGTGAGTCCAGG
TTCATGAGAGCTGGACATCCTCCGACAACCAGCTGACCATAGTGCCACCGACG----GACCACAAGTGAGCTATTCCTTC
TCTAGGTGTCCCATCCTAATCTGTTCCTTTGGAATTCTGTGATGATTCTTTTGCGTGCGAATGTTGCGCAAGTTATCCTT
CTTGCTATCGATT-ATATGAAATGCATATTCACTGGTCTGATTGTGGCTGTTGA-TTTTTTCTGCTTTTCTTGCACGCAA
GGTGTTTGTGCTTTTGTCCAAGAAGCTATCTGTTGGTAGACTATAAAA-GGCAGTGCTAT-CTGAACATAAAGCACATGT
TCATTCTGTTCATGTCTCATAGCTGTTTGCAAATTTGAGTATGCTTTAATTATTTTTCTCGGATTTGGCAACCT-AA-AA
ATGGTCTAATGCTCATATACTGTAGGTTGTGGCTGAAAACACCTGGCTTATAATAATCAAGAATCGAAGTCATAACCGCT
AGCTGTCCAGTAAAACCCAAGAGATGGAAGGCCGAATTCCTTTCAGAGATATTACAAATGTTCACTCGATCACTTCACCA
AAAGGGAACCAACGTACGTTTTTTTTAATATGTCGATATCTTCTACTTATTATCCTTATTGATCGCTTGCC
>chr3A_1771
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---------------------AATTTTTTGAATTTTGAATCTACCTTCTTCTTGCATGTTTTGCCCACCAACTTACATAA
TGGGTTCATCTG-TAGCCGTCCACTTTATCAGATCGAACGGCCCACATTACCCGGATTCGCCACCCACCTAATCCCGCCA
AAGCCTGA--ACTCAGTCGCCTCTTCTGGAAGACTCCACAACCCACGCTCGCCTCCAGCAAATCTATTCCC-GCCAAGGC
TCCAGCAATTCGATTCCCCGCCAAGGCGC-AGCCTCTCTCACTTCACCACCACATCCATATGCTCTGTGTGAAATTTCTC
TAGCGTGTACATCTCACACCACGATCTCCGCCAATTCATAACCGCCGGCCACGC-C-CCAGCTCCTTCCAATCACCTCAG
CGTACAGATTGCAGCTTCACCATCGTCTCCTTGCAAGCTCTGACTTGGTTCGATTTTTCTTGCCGCCTGGTGAGTCCAGG
TTCATGAGAGCTGGACATCCTCCTACAACCAGCTGACCATAGTGCCACCGACG----GACCACAAGTGAGCTATTCCTTC
TCTAGGTGTCCCATCCTAATCTGTTCCTTTGGAATTCTGTGATGATTCTTTTGCGTGCGAATGTTGCGCAAGTTATCCTT
CTTGCTATCGATT-ATATGAAATGCATATTCACTGGTCTGATTGTGGCTGTTGA-TTTTTTCTGCTTTTCTTGCACGCAA
GGTGTTTGTGCTTTTGTCCAAGAAGCTATCTGTTGGTAGACTATAAAA-GGCAGTGCTAT-CTGAACATAAAGCATATGT
TCATTCTGTTCATGTCTCATAGCTGTTTGCAAATTTGAGTATGCTTTAATTATTTTTCTCGGATTTGGCAACCT-AA-AA
ATGGTCTAATGCTTATATACTGTAGGTTGTGGCTGAAAACACCTGGCTTCTAACAATCAAGAATCGAAGTCATAACCACT
AGCTGTCCAGTAAAACCCAAGAGATGGAAGGCCGAATTCCTTTCAGAGATATTACAAATGTTCACTCGATGACTTCACCA
AAAGGGAACCAACGTACGTTTTTTGTAATATGTCGATATCTTCTACTTATTATCCATATTGATCGCTTGCC
>chr6B_1771
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---------------------AATTTTTTGAATTTTGAATCTACCTTCTTCTTGCATGTTTTGCCCACCAACTTACATAA
TGGGTTCATCTG-TAGCCGTCCACTTTGTCAGATCGAATGGCCCACATTACCAGGATTCGCCACCCACCTAATCCCGCCA
AAGCCTGA--ACTCAGTCGCCCCTTCTGGAAGACTCCACAACCCACGTTCGCCTCCAGCAAATCGATTCCC-GCCAAGGC
TCCAGCAAATCGATTACCCGCCAAGGCGC-AGCCTCGCTCACTTCACCACCACATCCATATGCTCTGTATGAAATTTCTC
TAGCGTGTACATCACACACCACGATCTCCGCCAGTTCATAACCGCCGTCCATGCCC-CCAGCTCCTTCCAATCACCTCAG
CATCCAGATTGCAGCTTCACCATCGTCTCCTTGCAAGCTCTGACTTGGTTCGATTTTTCTTGCCGCCTGGTGAGTCCAGG
TTCATGAGAGCTGGACATCCTCCTACAACCAGCTGACCATAGTGCCACCGACG----GACCACAAGTGAGCTATTCCTTC
TCTAGGTGTCCCATCCTAATCTGTTCCTTTGGAATTCTGTGATGATTCTTTTGTGTGCGAATGTTGCGCAAGTTATCCTT
CTTTCTGTCGATT-ATATGAAATGCATATTCACTGGTCTGATTCTGGCTGTTGA-TTTTTTCGGCTTTTCTTGCACGCAA
GGTGTTTGTGCTTTTGTCCAAGAAGCTATCTGTTGGTAGACTATAAAA-GGCAGTGCTAT-CTGAACATAAAGCACATGT
TCATTCTGTTCATGTCTCATAGCTGTTTGCAAATTTGAGTATGCTTTAATTATTTTTCTCGGATTTGGCAACCT-AA-AA
ATGGTCTCATGCTTATATACTGTAGGTTGTGGCTGAAAACACCTGACTTATAACAATCAAGAATCGAAGTCATAACCGCT
AGCTGTCCAGTAAAACCCAAGAGATGGAAGGCTGAATTCCTTTCAAAGATATTACAAATGTTCACTCGATGACTTCACCA
AAAGGGAACCAACGTACGGTTTTTTTAATATGTCGATATCTTCTACTTATTATCCTTATTGATCGCTTGCC
>chr6B_1771
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---------------------AATTTTTTGAATTTTGAATCTACCTTCTTCTTGCATGTTTTGCCCACCAACTTACATAA
TGGGTTCATCTG-TAGCCGTCCACTTTATCAGATCGAACGGCCCACATTACCCAGATTTGCCACCCACCTAATCCCGCCA
AAGCCTGA--ACTCAGTCGCCTCTTCTGGAAGACTCCACAACCCACGCTCGCCTCCAGCAAATCTATTCCC-GCCAAGGC
TCCAGCAATTCGATTCCCCGCCAAGGCGC-AGCCTCGCTCACTTCACCACCATATCCATATGCTCTGTGTGAAATTTCTC
TAGCGTGTACATCTCACACCACGATCTCCGCCAGTTCATAACCGCCGGCCACGCCC-CCAGCTCCTTCCAATCACCTCAG
CGTACAGATTGCAACTTCACCATCGTCTCCTTGCAAGCTCTGACTTGGTTCGATTTTTTTTGCCGCCTGGTGAGTCCAGG
TTCATGAGAGCTGGACATCCTCCTACAACCAGCTGACCATAGTGCCACCGACG----GACCACAAGTGAGCTATTCCTTC
TCTAGGTGTCCCATCCTAATCTGTTCCTTTGGAATTCTGTGATGATTCTTTTGCGTGCGAATGTTGTGCAAGTTATCCTT
CTTGCTATCGATT-ATATGAAATGCATATTCACTGGTCTGATTGTGGCTGTTGA-TTTTTTCTGCTTTTCTTGCACGCAA
GGTGTTTGTGCTTTTGTCCAAGAAGCTATCTGTTGGTAGACTATAAAA-GGCAGTGCTAT-CTGAACATAAAGCATATGT
TCATTCTGTTCATGTCTCATAGCTGTTTGCAAATTTGAGTATGCTTTAATTATTTTTCTCGGATTTGGCAACCT-AA-AA
ATGGTCTAATGCTTATATAGTGTAGGTTGTGGCTGAAAACACCTGGCTTCTAACAATCAAGAATCGAAGTCATAACCGCT
AGCTGTCCAGTAAAACCCAAGAGATGGAAGGCCGAATTCCTTTCAGAGATATTACAAATGTTCACTCGATGACTTCACCA
AAAGGGAACCAACGTACGTTTTTTGTAATATGTCGATATCTTCTACTTATTATCCATATTGATCGCTTGCC
>chr3B_1771
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---------------------AATTTTTTGAATTTTGAATCTACCTTCTTCTTGCATGTTTTGCCCACCAACTTACATAA
GGGATTCATCTG-TAGCCGTCCACTTTATCAGATCGAATGGCCCACGTTACCCGGATTCGCCACCCACCTAATCCCGCCA
AAGCCTGAGAACTCAGCCGCCCCTTCTGGAAGAATCCACAACCCACGCTCGCTTCCAGCAAATCGATTCCC-GCCAAGGC
TCCAGCAAATCGATTCCCCGCCAAGGCGCTAGCCTCGCTCACTTCAACACCACATCCATATGCTCTATATGAAATTTCTC
TAGCGTGTACGTCACACACCACGATCTCCGCCAGTTCATAACCGCCGTCCACGCCC-CCAGCTCCTTCGAATCAGCTCAA
CATCCAGATTGCTGCTCCACCATCGTCTCCTTGCAAGCTCTGACTTGATTCGAATTTTCTTGTCGCCTGGTGAGTCCAGG
TTCATGAGAGCTGGATATCCTACTACAACCAGCTGACCATATTTCCACCGACGGACTGACCACAAGTGAGCTATTCCTTC
TCTAGGTGGCCCGTCCTAATTTGTTCCTTCGGAATTCTGTGTTGATACTTTTGCGTGTGAATGTTGCGCAAGTGATCCTT
CTTGCTATAGATTTATATGAAATACAGATTCACTGGTCGGACTGTAGTTGTTGATTTTTTTCTGCTTTTCTTGCATGCAA
GGTGTTTGTGCTTTTGTCCAAGCAGCTATCTGTCGGTAGATTATAAAAAGGCAGTGCTCT-CTGAATATAAAGCATATGT
TCATTCTGTTTATGTCTCATAGCTGTTTGCAAATTTGAGTATGCTTTAATTATTTTTCTCGGATTTGGCAACCT-AAAAA
ATGGTCTAATGCTTATATACTGTAGGTTGTGGCTGAAAACACCTTGCTTATAACAATCAAGAATCAAAGTCATAACCGCG
AGCCGTCCAGTAAAACCCAAGAGATGGAAGGCCGAGTTCCTTTCAGAGATATTACAAATGTTCACTCGACAACTTCACCA
AAAGGGAATCAACGTACGTTTTTTATTAT--ACCGACATCTTCTACTTATTATCCTTATTGATCGCTTGCC
>chr2D_1774
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------------------------TTTTTGAAATTTGAATCTACATTCTTCTTGCATGTTTTGCCCACCAACTTACATAA
TGGATTCATCTT-TAGCCGTCCACTTTATCAGATCGAACGGCCCACATTACTCGGATTCGCCTCCCACCTATTCCCGCCA
AAGCCTGAGAACTCAGTGGCCCCTTCTGGAAAACTCCACAACCCACGCTCGCCTCCAGCAAATCGATTCCCCACCAAGGC
TCCAGCAAATCGATTCCCCGCCAAGGCGCCAGCCTCGCTGATTTCACCACCACATCCATATGCTCTGTATAAAATTTCTC
TAGCGTGTACGTCACACACCATGATCTCCGCCAGTTCATAACCGCCGTCCACGCCC-C-AGATCCTTCGAATCACCTCAA
CATCCAGATTGCAGCTCCACCATCGTCTCCTTGCAAGCTCTGACTTAGTTCAAATTTTCTTGCCGCCTGGTGAGTCCAGG
TTCATGAGAGCTGGACATCCTACTACAACCAGCTCACCATAGTGCCATCGACGGACTGACCACAAGTGAGCTATTCCTTC
TCTAGGTGTCCCATCCTAATCTGTTCCTTTGGAATTCTGTGATGATTCTTTTGCATGCGAATGTTGCGCAAGTGATCCTT
CTTGCTATAGATTTATATGAAATACATAGTCACTGATCTG-CTGTAGTTGTTGA-TTTTTTTTGCTTTTCTTGCACGCAA
GGTGTTTGTGCTTTTGTCCAAGCAGC--TCTGTTGGTAGACTATAAAA-GGCAGTGCTAT-CTGAATATAAAGCACATGT
TGATTCTGTTCATGTCTCATAGCTGTTTGCAAATTTGAGTATGCTTTAATTATTTTTCTCGGATTTGGCAACCT-AAAAA
ATGGTCTAATGCTTATATACTGTAGGTTGTGGCCGAAAACACCTGACTTATAACAATCAAGAATCAAAGTCATAACCGCG
AGCCGTCCAGTAAAACCCAAGAGATGGAAGGCCGAGCTCCTTTCAGAGATATTACAAATGTTCACTCCACGACTTCACCA
AAAGGGAACCAACGTACGTTGTTTTTATTAAACCGATATCTTCTACTTATTATCCTTATTGATCGCTTGCC
>SNPs
---------------------------------------S--------S--------S----------------------
------------------------------------S----------------------S--------------------
--------------------------------------------S--S-----------S---S----------------
S-------------------------------------------------------------------------------
----------------------------------------------------------------SSSSS-----------
--------------------------------S------------------------S-----------S----------
--------------------------------------------------------------------------------
----------S-----------------------------------------S-S----------------S--------
--------------------------------------------------------------------------S-----
-------------S---S-------------------------------------------S------------------
----------------------S------SS-S------------------------------------S----------
------------------------------------------------------S-------------------------
-----------------S------------------------SSS-----------------------------------
------------S---------S--------------------S------------------------------------
-----SSS---------------------------------------------S-------------S------------
--------S--------------S-------------------------------------------S------------
--------------------------------------------------------------------------------
--------------------------------S-----------------S----S----------S-------------
--------------------------------------------------------------------S--S--------
----------S----------------------------------------------SS---S-----------------
----------------------------------------------S--------------------S------------
-----------------S------------------------S-SS----------------------------------
--SSS-SSS-SSSSSSS--S----------------S-------S--S----S-----S------------SSSSSSSSS
SSSSSSSSSSSSSSSSSSS-------------------------------------------------------------
--S-----------------------------------------------------------------------------
------------------------------------------------------S-----------------S-------
---------S---------------------------------------------S------------------------
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----------------S--------------------S------------------------------------------
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---------------------------S----------------------------------------------------
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----------------S---------------------------SS-------------------------
>forward_978
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------------------------------------------------------------------------------CA
GCTCTCTGCAGTCACTGG--------------------------------------------------------------
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>reverse_2358
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-------------------------------------TATAGTGCCACCGACGGATTG----------------------
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-----------------------------------------------------------------------
