>input_sequence_67242
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-------------------------------------------------------ATGTCTTCCAGCGAGGTCGCCTGCA
CCCTTGCCGCCCTCATCCTCCACGATGACGGGATCCCCATCACTGTAAGTTGTTTGTCTTGGTTCCTTC---TCTTTGCG
CGATTCCTGGTCTGTTTCGTTGTCTGAGTGTT-----------------GTTGCTTGGCCCAACGCAGTCCGAGAAGATC
GCGACGGTGGTGAAGGCTGCCGGAATCAAGGTTGAGGCCTACTGGCCCGCGCTCTTCGCCAAGCTCCTGGAGAAGAGGAG
CGTCGATGACCTCATCCTTTCTGTCGGATCTGGTAAATCTCTCCCGCTCTCACTGTGTTATAATCCTCTGTAGTTTGTCC
GAGGCTTTGATTCACCTGGCCCGTTGTCTACTTTGCAGTAGACATATCATATTTATG-------------------TAAC
GTACTTTGATCTGCTGCTTGGTTAGTCTGTGCAAGTAGAGAATCCATCGCTTCACTTCATGTTAGACGACTTATTATT-A
AATTGAAGGATGCTCTTCTA-----------GTAGATGTACCTCTTAGCTGTTATGTTTTCTGAATTTAATTTCATGTGT
AAATTTGTAGCCATCCCTGTTTGACCAATCTTCTGCATTGTAATAGCAGAAACCGAGTAT-GCTACTCTTGATGTTTGTA
ATTTACCATGAGCAGCAACAGCAGTCGTTCTATGCTTTACGTTTTTCTTTACT------TTTAATCTTGTCAATGTAGTA
ATGTATTTTATTTGTTTATAGGTGGAGGTGGTGCTCCAGCTGCTGCTGCTGCTGCCCCGGCTGCTGGTGGTGCTGCTGCC
GCTGAAGAGAAGAAGGAAGAAAAGAAAGAAGAGGCCAAGGAAGAGAGCGATGATGACATGGGCTTCAGCTTGTTCGACTA
A-------------------------------------------------------------------------------
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>chr7A_1_TraesCS7A01G316300
GTTTTTTTTTTCGTAAAAAAAAGTTTGTCAAAACCTATTAACATGAAATCTAGTTTTGAATATTTCAACGCGAGGAATCT
AATGATGAAAACAGTTTGAGATTTGGACACACGATTTTAAAAATAAAATATTTTAAATAAATGAATCT----AAAAAAGG
AAAACTCTCAAGTTGCAACAAATGACCTGTTATATGTGCGCCACTTATCGCGACCTGGAAAGTGAAGTGTTTTTACAAGT
ACTCGATTTCACAAAACGATTCGCGAACACA--GTCGTAGAAACAGTCGAACCATGGGCCGTCCTAGAAACAGGAATCCA
GTTAGGAGTTCCCATCTAAGAGGCCC----AGTTTTTTTACAGACCCG----ACACATGACGAAACAATGGGCCCATTTA
CCACATTGCACCGCATCCGCACAAAGGCCCATGCGACCGTTCAGTCCAGCCCAAACTTCTACCGCGAAACCCTAGTGCTC
GGCACGAACCACCTATAAATTCCCATCCCAC-CGCGCCTCCCCAAAGCCTAGAAGCCCCCTGCCTCCTGCGCCTCCACTT
CCATCGCCTCCCCAAGGTAAGAGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNCTTTACTCTTGCAGATCGCAGATCCGCTCCGGTGAGAATCCGTCGCCATGTCTTCCAGCGAGGTCGCCTGCA
CCCTTGCCGCCCTCATCCTCCACGATGACGGGATCCCCATCACTGTAAGTTGTTTGTCTTGGTTCCTTC---TCTTTGCG
CGATTCCTGGTCTGTTTCGTTGTCTGAGTGTT-----------------GTTGCTTGGCCCAACGCAGTCCGAGAAGATC
GCGACGGTGGTGAAGGCTGCCGGAATCAAGGTTGAGGCCTACTGGCCCGCGCTCTTCGCCAAGCTCCTGGAGAAGAGGAG
CGTCGATGACCTCATCCTTTCTGTCGGATCTGGTAAATCTCTCCCGCTCTCACTGTGTTATAATCCTCTGTAGTTTGTCC
GAGGCTTTGATTCACCTGGCCCGTTGTCTACTTTGCAGTAGACATATCATATTTATG-------------------TAAC
GTACTTTGATCTGCTGCTTGGTTAGTCTGTGCAAGTAGAGAATCCATCGCTTCACTTCATGTTAGACGACTTATTATT-A
AATTGAAGGATGCTCTTCTA-----------GTAGATGTACCTCTTAGCTGTTATGTTTTCTGAATTTAATTTCATGTGT
AAATTTGTAGCCATCCCTGTTTGACCAATCTTCTGCATTGTAATAGCAGAAACCGAGTAT-GCTACTCTTGATGTTTGTA
ATTTACCATGAGCAGCAACAGCAGTCGTTCTATGCTTTACGTTTTTCTTTACT------TTTAATCTTGTCAATGTAGTA
ATGTATTTTATTTGTTTATAGGTGGAGGTGGTGCTCCAGCTGCTGCTGCTGCTGCCCCGGCTGCTGGTGGTGCTGCTGCC
GCTGAAGAGAAGAAGGAAGAAAAGAAAGAAGAGGCCAAGGAAGAGAGCGATGATGACATGGGCTTCAGCTTGTTCGACTA
AGCTGTTCAATTCCAGTTCTCCTGTGGGTTCTTCTATGCGAAAGACTTG---TCTTATGTGCTTTTAGGTCGAATTTTGA
AGATTTATTATGTTATGCTGTTTGAGACTAAGTATCTGTGCAATGAGTACTGCAAAACCTCCTTGGGATGGTCTTGTTAG
AATGAAAATGGTTCTACATTATGTTTATTGATCTTTTGGTGCATGTTTTCCTTTTTCTGGTCAGTTACTGATTATGTTGT
CACCAGTTTTCTATGCTCTGTGCTTGGATGACTGCCTGTAGCTTTTTTGAAATTGTGTCTCGTTGATTAATTATGGTGTT
GCAGCTGATTTGGTGGGGTGCACGTAGCTGCTCGTATTATGTGTGCCGATGGGTTTGTGTATTTCTGCTAAACATATATA
CTCCCTCCTTTCATCTATATAGGGGCCTAATGCGTTTTTCAAGATCGCGTTTTACTATTGACAAGATTAATACTACATGA
CATGAAAAACATATTAGGCCCTGACATGAAAAACATATTAGGCCCTGTACAGATGAAAGGAGGGAGTAATCTGTTTCTAA
TGGAAAGGTACTTCTTGCATGATAATTTGGCAGCTTGTTGTGCAACAAGCGCATACTTGAATATAACAGCAGGAGTTTGA
CAGTACAGTACATCTACCAATACTAGTTTTTCCAAAGAAAAATTTAGGCAGTTCTGTAGAAATTTGGCTAATTAGTTCCA
TGGACCCCTTGTGAATATAAAAATGGTTTTCATTGTTTCGCGAACTGAAAACTCAAAATTTCAGATTCAAATTTCAGATT
CTGATTTTACTAACTAAAAATCCATGAAATTGATACTAAACTTACGCCATGACTGACTCTTATTGGCCATATATATATAC
TTGTATCCATGGATGAGTTTAGAGGGGGCATGGATGAGTTTTGATGAGAATTTGATAATCCATGGATAACCCTAATTCCA
AACACTAGGTAAAAATAAAGAAAAAATGATGAGAATTTGATGGA
>chr7B_5
TTTTTTTCAT-----AAAAAAAGTTCGTCAAAACCTATCAATATGGGATCTAGTTTTGAAGATCTCGACGCGAGAAATCC
AAGG-TGAAAATGGTTCGAGATTTGGACGCACGGTTTAAAAAATAAAACATTTTGAATAAATGGATGTACGAAAAAAGGG
AAAACTCTCAGATTGTAACAAGCGGCGCACATACAGCGCGCCACTTAACAAGTTGGAGCGATTTTCGCAAGTCTTAATTT
CGGAAAAGAG--AAAACGATTCGCGAACACACAGTCGTAGAAACAGTAGAACCATGGGCCGTCGTAGAAACAGCCCACAG
AAGAAGCACCGCTTCTTTTAGGAGGCCCTTAGTTTTTTTACAGACCCA----ACACATGACGGAACAATGGGCCCATTTA
CCACATGCA----------CACAAAGGCCCATGAGACCGTTCAGTCCAGCCCAAACTTCTACCGCGAAACCCTAGTACTC
GGCACGAACCACTTATAAATTCCCAT-CCAG-CGGGCCTCCCCAAACCCTAGAAGCTCCCTGCCTCCTGCGCCTCCACTT
CCATCGCCTCCC-AAGGTAAGCGCCGCCGCCTCCCTTCTTTCCCACCTTGCCGCCGCCGCCGCAGCCTTCCCTTCCCCCC
TTTGACGCTGCATCTAATCCTAACGATTTTCTCCGTGT------------------------------------------
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--------CTTTACTCTTGGAGATCGCAGATCTGCTCCGGTGAGAATCCGTCGCCATGTCTTCCAGCGAGGTCGCCTGCA
CCCTTGCCGCCCTCATCCTCCACGATGACGGGATCCCCATCACTGTAAGTTGTTCGTTTTGGTTCTTTCTCTTCTTTGCG
CGATTCCTGGTCTGTTTCGTTGTCTGAGGGTTTTCGTTGTCTGAGGGTTGTTGCTCTTCCCAACGCAGTCTGAGAAGATC
GCGACGGTGGTGAAGGCTGCCGGAATCAAGGTTGAGGCCTACTGGCCCGCGCTCTTCGCCAAGCTCCTGGAGAAGAGGAG
CGTCGATGACCTCATCCTTTCCGTCGGATCTGGTAAACCTCTCCCGTTCTCACTGTGTTATATTCCTCTGTAGTTTATCG
AAGGCTTTGATTCACGTGGCCCGTTGTTTACTTAGCAGTAGAAATATCATATTGTTGCCACTGCCTCTAATTTATTTAAC
GAACTTCGATCTGCATCTTGGTTAGTCTGTGCAAGTAGAGAATCCATCGCTTCACTTCATGTTAGAAAACTTATTATTAA
AATTGAAGGATAATCTTCCTAGTCAAGACTTGTAGATGTACCTCTTAGCTGTTCTGTTTTCTGAATTTAATTTCACGTGT
AAAATTGTAGTCATCCCTGTTTGACCAATCTCGTGCATTTTTATAGTAGAGAATGAGTATTGCCATTCGGGATGATTTTA
GTTTATCATGAGCAGCAACAGCAATCGTTCTATGCTTTGCATTTATGTTTACTATCGCCTTTTATTTTGTCAATGTAGTA
ATGATTTTGATTCGTTTCCAGGTGGAGGTGGTGCTCCAGCTGCTGCTGCTGCTGCCCCGGCTGCTGGTGGTGCTGCTGCC
GCTGAAGAGAAGAAAGAAGAGAAAAAGGAGGAGGCTAAGGAAGAGAGCGATGATGACATGGGCTTCAGCTTGTTCGACTA
AGCAGTTCAATTCCAGTTCTCCTGTGGAATCTTTTATGCTAAGGATTACTTATCTTATGTGCTTTTAGGTCGAATTTTGC
GGATTTAATATGT-------TTGAGACCTAAGTATCTGTGCAATGAGTACTGCAAA-CCACCTTGGGATGGTCTTTTTAG
AATGAAAATGGTT-------------------------------------------------------------------
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>chr7D_318
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---AGGAGTTCCAATCAAAGAGGCCC----AGTTTTTCTACAGACCCAACACACATATGACGAAACAATGGGCCCATTTA
CCACATTGCACGGCATCCGCACAAAGGCCCATGCGACCGTTCAGTCCAGCCCAAACTTCTACCGCGAAACCCTAGTGCTC
GGCACGAACCACCTATAAATTCCCAT-CCCACCGGGCCTCCCCAAACCCTAGAAGCCCCCTGCCTCCTGCGCCTCCACTT
CCATCGCCTCCCCAAGGTAAGAGCCGCCCCCCC-----------------------------------TCCCCTCCCCCC
CCTGACGCTGCATCTAATCCCAATGCTTTTCTTCGTGT------------------------------------------
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--------CTTTACTCTTGCAGATCGCAGATCCGCTCCGGTGAGAATCCGTCGCCATGTCTTCCAGCGAGGTCGCCTGCA
CCCTTGCCGCCCTCATCCTCCACGATGACGGGATCCCCATCACTGTAAGTTGTTCGTCTTTGTTCCTTCTCTTCTTTGCG
CGATTCTTGGTCTGTTTCGTTGTCTGAGG-----------------GTTGTTGCTTGGCCCAACGCAGTCTGAGAAGATC
GCGACGGTGGTGAAGGCTGCCGGAATCAAGGTTGAGGCCTACTGGCCCGCGCTCTTCGCCAAGCTCCTGGAGAAGAGGAG
CGTCGATGACCTCATCCTTTCCGTCGGATCTGGTAAACCTCTCCCGCTCTCACTGTGTTATATTCCTCTGTAGTTTATCC
AAGGCTTTGATTCACGTGGCCCGTTGTGTACTTCACAGTAGACATATCATATTGTTGCCACTGCCTCTAATTTATGGAAC
GTACTTTGATCTGCTGCTTGGTTAGTCTGTGCAATAAGAGAATCCATCGCTTCACTTAATGTTAGACAACTTATTATT-A
AATTGAAGGATGA-CTTCCTAGGCAGGACTTGTAGATGTACCTA-----TGTTCTGTTTTCTGAATTTAATTTCACGTGT
AAATTTTTTGTCATCCCTGTTTGACCAATCTCGAGGAGTGTAATAGTAGAGAATGAGTAT-GCTATTCGGGTTGATTGTA
ACTTATCATGAGCAGCAACAGGAGTGGTTCTATGCTTTGCATTTACGTGTACTGCTGCCTTTTATTTTGTCAATGTAGTA
ACGAATTTGATTCGTTTCCAGGTGGAGGTGGTGCTCCAGCTGCTGCTGCTGCTGCCCCGGCTGCTGGTGGTGCTGCTGCC
GCTGAAGAGAAGAAAGAAGAGAAAAAGGAGGAGGCCAAGGAAGAGAGCGATGATGACATGGGCTTCAGCTTGTTTGACTA
AGCAGTTCAATTCCAGCTCTCCTGTGGAATCTGCTATGCTAAAGATTACCTATCTTATGTGCTTTTAGGTTGAATTTTGC
GGATTTGATATGTAATTCTGTTGAGACCTAAGTATCTGTGCAATGAGTACTGCAAA-CCACCTTGGGATGGTCTTTTTAG
AATGAAAATGGTTCTACATTATGT--------------------------------------------------------
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>SNPs
S------SS-SSSSS----------S------------S--S---SS-------------S--S--S-------S----S
--S-S------SS---S-----------S----S---S----------S-----S--------S--S----------S--
----------SS---S-----SS-S-SSSSSSSSS-S----------S-SS-SSSSS-SS-S-SSS-SSSS-S-SS-SS-
SSSSS-SSSSSS-----------------------------------S---------------S---------SSSS-SS
SSS---------S----------------------------------S--------------------------------
-----------S--------------------------------------------------------------------
--------------------------S---S---S-----------S---------------------------------
-------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS------------------------------------------------------------------------
------------------------------------------------------S-------------------------
----------------------------S-----------------------------------------S---------
--------------------------------------------------------------------------------
---------------------S---------------S------------------------S-------------S---
S--------------S-----------S-----S-------------------SS-------------------------
-------------------------------------------------------------------S------------
------------S-----SS---------------------------------S---------------------S----
----------S--------------------SS-------------S---S-SS-----------S--SS----S-----
-----S--------------------------------S-S---S-S---------------S--S--------------
---S----S---S----SS-------------------------------------------------------------
--------------S-----S--S--S--S--------------------------------------------------
---S-----------------------SS----------S-----S-SS------------------------------S
S------S-----S--S-----SSSSS-----------------------------S--S---------------S----
------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_220
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----------------------------------------CCACTTATCGCGACCTGGAA--------------------
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>reverse_2238
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-----------------------------------------------------------------------------GTT
GCAGCTGATTTGGTGGG---------------------------------------------------------------
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