>input_sequence_67186
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---------------------------------------------------------------ATGGCGCTTCGATCGTC
CTCGTGGCTGCTGATCTCCCTCCTCCTCGCCGTGACGCCAGCCCCTAGCACATGTGAGGATAGCGTCCGCATCGCGGACG
CAGGCGGCTTGCTGCAATGCTACCCGGCGCCGGCGCTCACCAACGCCACCAACGGCACGGCGTTTCGCGCCACCCTGCTC
CCGCTCCTCCGCTCTCTCCCCTCCGCCGCCGCGCACACGTGCTTCGCCTCCCTACGGTCCGTCACCCGCGGGGAGCGCGC
GTTCGCGCGGGGGCTCTGCTTCGGCAACACCACGGTGCCGTCCGAGTGCGCCCGGTGCCTGTCCGCCGCGGCTGGGAACC
TCACCGCTGGCTGCGGTGCCACCAGCCGGCGCGCTGGCATCTGGAGCGACCGGTGCTTCGTCGGCTACGCCGACACCAAT
GCATCCTCGCCAAGCGAGGACGC---------------------------------------------------------
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--------------CTTCCGCGCCCG------GGTCCTCTT---------C---------GACGCCGTCC------CTGC
CTCTAAGGTCAACACCAAATCCTTCTACTACGCCCACCTGCACAATGAGCTCGTCGCCATGGCGAAGGACGTGGCGCGGC
GCGCGGCCGCAAACATCTCCGGGCCGCGGATGCTGGCCACAGCGGAGGGGACCAACTCCGAGAGCGTGGTGAGCAGAACA
GTGCACGTTCTGGCGCAGTGCAGGAGGGACCGCACGGCGGCGGACTGCGTCCAGTGCCTGCAGGAGTCGGTGCAGGGCGT
GGACTGGGACCTCAACGTTGCCCGCGTCGACGGTGGCGTGGCGGCCGCGGTGGTGGGCTTCAACTGCTACCTACGGTTCG
AGGTCTCCACTGCAGTGAGTGACAACGATCTCAATACCGGTGAGTTCTCCTGA---------------------------
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-------------------------------------------------------------------------
>chr3D_1_TraesCS3D01G124900
TATAAAATGTCACATGCATTTCCTTATTATTATAAAATATTTTTGAATTAAGCATACATTTTAAAAAATGTCACGGATAT
TTTTTTAATGTCACGTAATTTTTTTGAATGGTAGAATGTGTTTTTTCGAAGTTACGAGAATAATTTTTTCATTATAGATT
TTTTTTCAAAAATGGTACAAACTGTTTTTT-AATACACGTAAAGATTTTAAAAATGTCATGTATATAT-TTTTTGAATGC
TATCAACAATTCTTCTGAAGGACGCAATAATAAGTACATTTTA-TTAAAAAAAATGAATGCGTGATGAACAATTTTCTGA
ATTGAACAAAAATAGTTTTCCAGTTTTAGAAATATAAATATAAATAATATAAAAAGTAAAAAAGAACGTGCTGGAGAGGC
AGTGCTCCTCCCATGCTGGGCCGGACCATTTAAGGGGCGCCACATGAATTCCTGTTGTTCCGTCATG-------------
-ATGTGATGTATGAAGAAAGGGTTTAAGGGGTTTACAACTCGTGGAAAGCAGACTACTCCTATAAAGGGTTTAAGACTAA
GCAGCAGTCAGTGGATGCCTACTTCAAATTGGTGCACAAGCATGCAAGCAATGTTGAAGTAGGCAAGGCTG------TGT
TTGGGATGAAGAACTTCATCATT--------GTTCATCGTGATTGTAATGTCGTTTTATTAGTGTGATTATATG------
---TAACGTGTAGTTGATAAGCTTGCCACATAAGAATAGGATACAAGGTAAGTAGACCCATAC-----------------
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-----------CATACGCGGTGCCAAGTTTGCGTATTTGCGAGCAGGCAGGCAGCAGTCATCTTTTTTAGGGAAAAGCAG
GCAG----CAGTCTTTTTTCGTGAAAGAATCCACCTTATTG---CCCAGTGCATCGT------------TTTT-CGACTA
GTCCTCGTCGTG-------GTTAACACCGCACCAACCAAGCTGAGGAGTT-GAAGTTCGAGACATTCTCCA-------CT
GCCGCCCCCTCTTCTACAGCTCCACTTCCAAGTTCCAAGTGCCAAAGCGGCTACGCCACAACAATGGCGCTTCGATCGTC
CTCGTGGCTGCTGATCTCCCTCCTCCTCGCCGTGACGCCAGCCCCTAGCACATGTGAGGATAGCGTCCGCATCGCGGACG
CAGGCGGCTTGCTGCAATGCTACCCGGCGCCGGCGCTCACCAACGCCACCAACGGCACGGCGTTTCGCGCCACCCTGCTC
CCGCTCCTCCGCTCTCTCCCCTCCGCCGCCGCGCACACGTGCTTCGCCTCCCTACGGTCCGTCACCCGCGGGGAGCGCGC
GTTCGCGCGGGGGCTCTGCTTCGGCAACACCACGGTGCCGTCCGAGTGCGCCCGGTGCCTGTCCGCCGCGGCTGGGAACC
TCACCGCTGGCTGCGGTGCCACCAGCCGGCGCGCTGGCATCTGGAGCGACCGGTGCTTCGTCGGCTACGCCGACACCAAT
GCATCCTCGCCAAGCGAGGACGC---------------------------------------------------------
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--------------CTTCCGCGCCCG------GGTCCTCTT---------C---------GACGCCGTCC------CTGC
CTCTAAGGTCAACACCAAATCCTTCTACTACGCCCACCTGCACAATGAGCTCGTCGCCATGGCGAAGGACGTGGCGCGGC
GCGCGGCCGCAAACATCTCCGGGCCGCGGATGCTGGCCACAGCGGAGGGGACCAACTCCGAGAGCGTGGTGAGCAGAACA
GTGCACGTTCTGGCGCAGTGCAGGAGGGACCGCACGGCGGCGGACTGCGTCCAGTGCCTGCAGGAGTCGGTGCAGGGCGT
GGACTGGGACCTCAACGTTGCCCGCGTCGACGGTGGCGTGGCGGCCGCGGTGGTGGGCTTCAACTGCTACCTACGGTTCG
AGGTCTCCACTGCAGTGAGTGACAACGATCTCAATACCGGTGAGTTCTCCTGATCAATCTTTCAATTTCCTCTCACGGAC
AAAAATGGGTTGCATCTTTCATCCAAAACGTCTCACTGAGACAAAACTAAAGGCATCACCAAAGCAAACCCTCAAAGTGC
ATGATCATGTCGAGTCCGGACCACTTTTATCATCCAAGAGGAAGGCATGACCAACGCTGCACTCTGGGCGGTTGCTCCAG
CCCTTCACATCGGATTTGGTGGCCAGACTAAAAAAACGGTGTTGCTTGCAGAGTGGAACGAGCGCTTGCAGAGGAGGCTG
CCTCCTCCCTGACAAAAAGTCGCTTCAGCTCTCTCCTAGCCAATGTCATGGCAACCTCGGCTTGCTTTACAGCATCTCCA
GCCGCATCTCCAACAA--GC-CCTCCG---GGCCCTTTTTTATCGTCGGCATCGAAAAATCAGTCCAGTCGCGT--CCCA
GAAG-CCCACTTTTCGCCGGTTAAGGCCGAATTCGGCGTCGGCGAACCCGTGCCGGC----GCGCTGG---GGGGC----
------TCGCGG----------GGGG-----------AAACG--GTTTTGGCGCGGAAGCCTGGCGGGCCCGCCGAGTCA
GCGACCGGGCGTGCTCGTCGTCCTCATCGCCTCGGTTTCCCGCGGGGAATCAA--TGCCAAGGCGGCCGCGTTGCCGCGC
CGGTCAGCCTTCCATTGATGCCTCATGGGCGGCGCAGTGAAGGCGCCACGACACGCGTCCCGCCCGCTCCCGCCACGCGT
ACGCACGCATGCCGCCCGCTCACCGCCCCCGCCT--CTATAAAAGCCGGGCCCTCCCTCGCCGGTGAGCGCACGCCC---
-------------TCCATCGCCACAGAACCCTCTC---------------------CCCCTCTCGACCTCTC--------
-ACCGCCGACGCGCGT-----CTCTCC---TCT------------------------------TTCCCCCCGA-CGACGA
GCATGGCCGAACGCTACCCATGCGATGGTGCGGCGACCAACGGCTTCGGCCGCCGCCACCTGCACGAGGACGAGGCACGC
CTCCTATACGAGGCGGACTATCCGGCGCCGC-CGGACATGTGGGTGCCGGG-TTCCTGGAGGCTCAGCGCCGG
>chr3B_79
------------------------------------------------------------------------------AT
TTCTTTAATGTCATGTAAATTTATCGAATGGTAGAATGTATTTTTTCTAAGTTACGAGAATAATTTTTTCATTATACATT
TTTTTTCAAAAATGGTACGAACTGTTTTTTCAAAACACGTTAAGTTTTTCAAAATGGCATGCATATATATTTTTGAATGC
TATCAACA-TTTTTTTGAGGGACACAAAAATAACTACATTTTATTTAAAAAAAAGGAATGCATGATGAACCGTTTTCTAA
ATTGAACAAAAATATTTTTCCAAATTTAGAAATATAAATAAAAATAATAGAAAAAGTAAAAAAGAACGTGTTGGAGAGGC
AGCACTTCTCCCATGCTGGCCTGGACCATTTAAGGGGCGCCGCATGAATTCTTGTCGTTCTGTCATGCTAAGACAAGTGA
TATGTGGTGTATAAAGGGAGGGTTTCAGGGGTTTTGCT--------AAGCAGACCACTCCTACAAAGGGCTTAAGATTAG
GCAACAGGCAGTGGATGCTTACTCCAAGTTTGCGCACAAGTATGCAATCAATGTTGAAGTAGGCAAGGCTCCTTGACTGT
TTGGGATGAAGAACTTCATCATCATCGTCCAGTTCATCGTGATTGTAATGTCGTTTTATTGGTGTGATCGGTGTGATCGT
GTATAAAGTGTAGTTGATAAGCTTGCCACATTGGAACATGATACAAGGTAAGCAGACCACGCTACATGTATGTAACCAAA
CAGTGTGTCGTTGTAAGAGCCTAGCCAATGCAGGCAACCAAACACATGGGCCAGAAACGGTGCTATGACGCAGGGAAGCG
GTACGCAAACAACCAAATAGCGTGTAGATGTTTTTTCTGTCTTTATTTGCTTATAAGGAGACCCAAAAGTATGCAAAGGG
GGCAAGACGATGCTGGCAACCAAACGTGTCCAAAGAAGCAAGTGGCTTGTGGTTTTAGTGAGGCTGCAAGGTTGTGCCCG
AATCTCTTGGCAGAAACTTCGCCCCAACTCCAAGCGAAGTTCTTCGCGGCTTTGGCGTACCCATCACCCGGCCTAGCTGC
AAGTTTGCGTACATACGCGGTGCCAAGTTTGCGTATTTGCGAGCAGGCAGGCAGCAGTCAACTTTTCTAGGG-AAAGCAG
GCAG----CTGTCTTATTTGGTGAAAGAATCCACAG---TG---TCCATTGCATCGT------------TTTTGTGACTA
GTCCTCCTCGTGCTTAACAGTTAACACCGCACTAACCAAGTCGAGGAGTTCGAGGCTCGAGACATTGTCCA-------GT
GCCG-CCCCTCTTCCACAGCTCCACTTCCAAGTGCCAAAGCGGGT-CGCCGGTCGACACAGC-ATGGCGCTTCCAGCGAT
CTTGTGGCTGCTCATCTCCCTCCTCCTCGCCATGACG---GCCCCTAGCACCTGTGAGGAGAGCGTGCGCATCGCGGACG
CAGGCGGCTTGCTGCAGTCCTACCCGGCGCCGGCGCTCACCAACGCCACCAACGGCACGGCGTTTCGTGCCACCCTGCTC
CCGCTCCAACGCTCTCTCCCCTCCGCCGCCGCACGCACGGGCTTCGCCTCCCTACGGTCCGTCACTCGCGAGGAGCGCGC
GTTCGCGCGGGGGCTCTGCTTCGGCAACTCCACGGTGCCGTCCGAGTGCACACGGTGCCTGTCCGCCGCGGCTGGGAATC
TCACCACCGGCTGCGGCGCCACCAGCCGGCGTGCCGGCTTCTGGAGCGACCGCTGCTTCCTTGCCTACGCCGACACCAAC
ACATCCTCGCCAAGCGAGAACGCCTTCCCCTCGCGTCCGCCTCGCGTCGTAACCCCTCGCGTATCCGTCCGCCTCGCGTC
GTAACCCCTCGCGTCGCCTCCCCCCAGGCGGCGGTAGGGGCCCCAACCCTAGCGCCGCCAGCCCCTCCCTCCCACCCCCT
CCTGCCGCCGCTGCCGCCGGCATGGGCCGTGGTGGCGGTGGGCCCGGTGACAAAGCTCCTGGGCGGGTGGTTGCGACGGA
TCGCATCTGAGGCGGCGGGGGCGGCCCTTCTCATGAGATCCAACGGCGGCGGCCTGGACGGAGAATCCGGGCTGAGTGGC
GGGGGCCGGAGCACCATCGCCGGGGTCACGGCGGAGCGGCGGCCATGCATGGACGGCGGCGATGGCAGCGCCCCATCCGG
CGAGATGGCTGTCCTGCTCGTGATGGTGACGACGGCTACTGCGGATCCAACGCCCCGTTTGGATCCATCGCCGGGAGGCC
TTTCGCCGACTGGCGGCGCGTGGAGGGACCGGTGAGGAGATGCTGGATCTCCGCCGGAGTACCGACGGCAACATACGTCT
TCGTGGCGAGGTTCCGCTCAGTTCCAGCCAGCCACGAGATCGGGAAGACGTGGCTTCCGGTGAAAATCGCGCCAGACTGC
GGTCTTGGCAGACGATGGCGGCGTCTCCGACGTCGTTTCCTTCTGGAGGCATCGTCGTTGCAGGTCTCATCAACCTGATC
GGGAAGTTCCGGGGGAAACCCTAGATCTGGGTCTACCGGATCGGACGATGACGGTGCTATCGGTACCGTTCTCCCTCCTG
GGGGCATCGTTTTGGAGCGAGTGCTGGTTGGAGGGGACAAGAGGAGGAGCGGTGTTTCATCTGCTCCATTGATGACGGCG
GATCTCGGCGGCGTGGCGCAGTGGAGACTCGGCGCCTGATGAGCGGAGATGGACTCGCGCAGGAGGGTGACGCTGCCTGG
CGTCATGGTGGCGTCGGCGGCAGTTGGACCGGCCAAGGTTGATGCAGCAGTACAACTTTGAAGATGGGTTCGTGGCAGGT
GGCTGCGGCGGCCTCGTACCCGGCAGGGGTCCTGGTTGAGAAGCACGCCAGACTGGTGGATGCCCATACCCGGCAGGCGT
CCTGGGTGGGACCTCAAGTCTTTAGATGGTTAGGTTTGGCTGCGTGGTCTGTTTGGTATGAGGCCCAGACTTTCAACGCC
TCTACATCAACTGGATAGGGATAGCGACAGTTGTTGCTTAGTTTGGTGGCTTTAGACTTATTGTTGTATGACTCTGTACG
GTCTTGTGTCAATAATTAATAAAATGGCCGTATGCATCGTCCAGATGCAGAGACCGGGGGTCGTCCTCCTTTTCTAAAAA
AAAAGCGAGAACGCCTTCCGCGCGCG------CGTCCTCCT---------CCCGGGCGACGACGCCGTCCCTGTCCCTGC
CTCTAAGGCCAACACCAAATCCTTCTTCTACGCCCACCTGCACAATGAGCTCGTCGCCATGGCGAAGGACGTGGCGCGGC
GCGCGGCCGCAAACATCTCCGGGCCGCGGATGCTGGCCACAACGGAGGGGACCAACTCCGAGAGCGCGGTGAGCAGAACA
GTGCACGTTCTGGCGCAGTGCAGGAGGGACCGCACGGCGGCAGACTGC--------------------------------
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>chr3A_743
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--------------------------------------------------------------C-----------------
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-----------CATACGCGGTGCCAAGTTTGCGTATTTGCGAGCAGGCAGGCGGCAGTCATCTTTTTTAGGG-AAAGCAG
GCACCA---AGTCTTATTTCGTGAAAGAATCCACCTTATTG---CCCAGTGCATCGT------------TTTT-TGACTA
GTCCTCGTCGTG-------GTTAACACCGCACCAACCAAGCTGAGGAGTT-GAAGTTCGAGACATTCTCGACTGCCGGCT
GCCGCCCCCTCTTCTACGGCTCCACTTCCAAGTGCCAAAGCGGCCACGCCACAA-CCACAACAATGGCGCTTCCAGCGAC
CTCGTGGCTGCTCATCTCCCTCCTCCTCGCCGTGACGCCAGCCCCTAGCACCTGTGAGGAGAGCGTGCGCATCGCGGGCG
CAGGCGGCTTGCTGCAGTGCTACCCGGCGCCGGCGCTCACCAACGCCACTAACGGCACGGCGTTTCGCGCCACCCTGCTC
CCGCTCCTCGGCTCTCTCCCCTCCGCCGCCGCGCCCACGGGCTTCGCCTCCCTACGGTCCGTCACTCGCGGGGAGCGCGC
GTTGGCGCGGGGGCTCTGCTTCGGCAACTCCACGGTGCCGTCCGAGTGCGCCCGGTGCCTGTCCGCCGCGGCTGGGAACC
TCACAGCTGGCTGCGGCGCCACCAGCCGGCGCCCCGGCATCTGGAGCGACCGGTGCTTCGTCGGCTACGCCGACACCAAC
GCATCCTCGTCAAACGAGGACGG---------------------------------------------------------
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--------------CTTCCGCGCGCG------CGTCCTCCT---------CCCGGGCGACGACGCCGTCC------CTCG
CTCTGTGGCCAGCACCAAATCCTTCTACTACGCCCACCTGCACGATGTACTCGTCGCCATGGAGAAGGACGTGGCGCGGC
GCGCGGCCGCGAACATCTCCGGGCCGCGGATGCTGGCCACAGCGGAGGAGACCAACTCCGACAGCGCGGTGAGCAGAACA
GTGCACGTTCTGGCGCAGTGCGGGAGGGACCGCACGGCGGCGGCCTGCGTCCGGTGCCTACAGAACTCGGTGCAGGCCGT
GCACTGGGACCTCAACGCTGCCCGCGTCGACGGTGGCGTGGCGGCCGCGGTGGTGGGCTTCAACTGCTACATGCGGTTTG
AGGTCTCCACTGCAGTGGGTGGCGACACTATCACTGGCGGTGAGTTCTC-------------------------------
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>chr3A_808
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---------------------------------------------------------------------------AGCAG
GCAGCAGTCTTTCGTTTTTAGGGAAAGAATCCACATTATTGTCGTCCAGTGCATCGTTTTCCCTTTTTCTTTT-TGACTA
ATCCTCGT--------------------GCACCAACCAAGCCGAGGAGTT-CAAGTTCGATACATTGTCCA-------GT
GCCGCCCCCTCTTCCACAGCTCCACTTCCAAGTGCCAAAGCGGGG-CGCCACCG-CCACAGC-ATGGCGCTTCCAGCGAT
CTCGTGGCCGCTCATCTCCCTCCTCCTCGCCGTGACGCCAGCCCATAGCACCTGTGAGGAGAGCGTGCGCATCGCGGGCG
CAGGCGGCTTGCTGCAATGCTACCCGGCGCCGGCGCTCAGCAACGCCACGAACGGCACGGCGTTTCGTGCCACCCTGCTC
CCGCTCCTCCGCTCTCTCCCCTCCGCCGCCGCGCCCACGGGCTTCGCCTCCCTACGGTCCGTCACTCGCGGGGAGCGCGC
GTTCGCGCGGGGGCTCTGCCTCGGCAACTCCACGGTGCCGTCCGAGTGCGCCCGGTGCCTGTCCGCCGCGGCTGGGAACC
TCACCGCCGGCTGCGGCTCCACCAGCCGGCGCGCCGGCTTCTGGAGCGACCGGTGCTTCCTCGCCTACGCCGACACCAAC
ACATCCTCGCCTAGCGAGGACGC---------------------------------------------------------
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--------------CTTCCGCGCTCT------CGTCCTCCT---------C---------GACGCCGTCC------CTGC
CTCTAAGGTCAACACCAAATCCTTCTACTACGTCCACCTGCACGATGAGCTGGTCGCCATGGCGCAGCAGGTGGCGCGGC
GCGCGGCCGCGAACATCTCCGGGCCGCGGATGCTGGCCACAGCGGAGGAGAGCAACTCCGAGAGCGCGGTGAGCAGAACA
GTGCACGTTCTGGCGCAGTGCGGGAGGGACCGCACGGCGGCGGGCTGCGTCCGGTGCCTGCAAAACTCGGTGCACGCCGT
GGACTGGGACCTCAACGCTGCCCGCGTCGACGGTGGCGTGGCGGCCGCGGTGGTGGGCTTCAACTGCTACATGCGGTTTG
AGGTCTCCACTGCAGCGTGTGGCGACACTATCTGGGGCGGTGAGTTATCTTGATCAATCATTC-----------------
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>chr3D_992
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------------------------------------------------------GCCGCAACAATGGCGCTTTCACCTAC
CTCGTGGTTGCTCCTCTC---CCTCCTCGCCGCAACGCCGGCCCCTGGCACCTGCGAGGAGCGCGCACGCATCGCGGAAG
CGGGCGGCTTGCTCCACTGCTACCAGCCGCCGGCGCTCACCAACGCCACCAACGGCACGGCGTTTCGCGCCACCCTGCTC
CCGCTCCTCCGCTCTCTCCCCTCCACCGCCGCGCGCACGGGCTTCGCCTCCCTACATTCCGCCGCCCGCGGGGAGCGCGC
GTTCGCGCGGGGCCTCTGCTTCGGCAACTCCACGGCGCCGTCCGAGTGCGCCCGGTGCCTGTCCGCCGCGGCTGGGAACC
TCACCGCCGGCTGCGGCGCCACCAGCCTGCGCGCCGGCATCTGGAGCGACCGGTGCTTCGTCGGCTACGCCGACACCAAC
ACAACCTCGCCTAGAGAGGACGC---------------------------------------------------------
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--------------CTTCCGCGCGCG------CGTCCTCCT---------CCCGGGCAACGACGCCGTCC------CTCG
CTCTGTGGCCAGCACCAAATCCTTCTACTACGCCCACCAGCACGATGTACTCGTCGCCATGGCGAAGGACGTGGCGCGGC
GCGCGGCCGCAAACATCTCCGGGCCGCGGATGCTGGCCACAGCGGAGGAGACCAACTCCAACAGCGCGGTGAGCAGAACA
GTGCACGTTCTGGCGCAGTGCGGGAGGGACCGCACGGCGGCGGACTGCGTCCGGTGCTTGAAGGACTCGGTGCAGGCCGT
GCACTGGGACCTCGACGCTGCCCGCGGCGACGGTGGCGTGGCGGCCGCGGTGGTGGGCTTCGACTGCTACCTACGGTTCG
AGGTCTCCACTGCAGTGGGTGACAACTATGCCACTAATCGTGAGTTCTCTTGATCAATCTTTC-----------------
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>chr3B_992
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------------------------------------------------------GCCGCAACAATGGCGCTTCCAGTGAC
CGCGTGGCTGCTCCTCTCCTTCCTCCTCGCCGGGACGCCGGCCCCTGGCACCTGCGAGGAGCGT-----------GGACG
CGGGCGGGTTGCTCCAGTGCTACCCAGCGCCGGCGCCAACCAACGGCACCAACGGCACGGCGTTTCGCGCCACCCTGCTC
CCGCTCCTCCGCTCTCTCCCCTCCGCCGCCGCGCACACGGGCTTCGCCTCCCTACATTCCGCCGCCCGCGGGGAGCGCGT
TTTCGCGCGGGGGCTCTGCTTCGGCAACTCCACGGTCCCGTCCCAGTGCGCCCGGTGTCTGTCCGCCGCGGCTGGGAACC
TCACCGCCGGCTGCGGTGCCACCAGCCGGCGCGCCGGCATCTGGAGCGACCGGTGCTTCCTCTCCTACGCCGACACCAAC
ACATCCTCGCCTAGCGAGGACGC---------------------------------------------------------
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--------------CTTCCGCGCGCGCGTGCGCGTCCTCCTCCCGGGCGAC---------GACGCCGTCC------CTCG
ATCTGCGGCCAGCACCAAATCCTTCTACTACGCCCATCTGCACGATGTACTCGTCGCCATGGCGAAGGACGTGGCGCGGC
GCGCGGCCGCAAACATCTCCGGGCCGCGGATGCTGGCCACAGCGGAGGAGACCAACTCCGACAGCGCGGTGAGCAGAACA
GTGCACGTTCTGGCGCAGTGCGGGAGGGACCGCACGGCGGCGGACTGCGTCCGGTGCTTGCAGGACTCGGTGCAGGCCGT
GGACTGGGACCTCCACGCTGCTCACAGCGACGGTGGCGTGGCGGCCGCGGTGATGGGCTTCGACTGCTACCTACGGTTCG
AGGTCTCCACTGCAGTGGGTGACAACTATGGCAGTAATTGTGAGTTCTCTTGATCAATTTTTC-----------------
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-------------------------------------------------------------------------
>chr2D_2179
TGCTT---------------------------------------------------------------------------
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--------------------------------------------------------------------AGAGCATCTCCG
GCCGCGCTCCTAACAA--GC-CCCCCCTAAAG-CCTTTTTTATCGCCGGCATCGAAAAATCGGCTAAGTCACGT--CCCA
GAAG-CCCACTTTTCGCCGGTTATGGCCAAATTTGGCGCCGGCGAACCCAGGCCGGACCCGGCGCGCT---GGGGG----
------GCTCCT----------GGGGCTT--CGGGGGAAACA--GATTTGGCGCAAAAGCCTGGCGGGCCCGCCGAGTCA
GCGACCAGGCGCGTTCGTCATCCTCATCGCCTCGGTTTCCCATGGAGAATCAA--TGCCAAGTCTGTCGCGCTGCCGCGC
CGGTCAGCCTTCCATTGATGCCTCACGCGCGGCGCAGTGAAGGCGCGGCGACGCGCGTCCCGCCCACTCCCGCCATGCGT
ACACACGGCGGCTACCCTCTCGCCGCCCACGCACGGCTATAAAAGCCG-CCCC---CTCACTGGTGAGAACATA--C---
-------------TCCATCGCCACAGAACCCTCTC---------------------CCCATCTCGACCTCTC--------
-ACCGCCGACGCACGT-----CTCTCC---TCTC-----------------------------TTCCCCC-GA-CGATGA
GCATGGCCGAGCGCTACCCAGGCGATGGTGCGATGGCCAACGGCTTCGGCCGTCGCCACCTACACGAGGACGAGGCACGC
CTCCTCTACGAGGCCGATTACCCGGCGCCGC-CGGACATGCGGGTGCCGGG-CTCTTGGAGGCTCAGCGTCGG
>chr2D_2183
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------------------------------------------------------------------TTAGAGCATCTTCA
GCCGCGTCCCCAACAT--GC-CCCC---AAGGTCCTTTTTCGGCGCCGGCACAGAAAATTCAGCCCAGTCACGCC-CCCA
GAAG-CCCAATTTTCGCCGGTTAGGGCCGAATTTGGTGCCGGCGGACCCAC-CTGAACACGGCGCGCT---AGGGG----
------GCGCCC----------GGGGGCG--CCGGGGGAAATGTTTTTTGCCATGAAAAGA-AGTGGGTCCGGCGAGTCA
GCGACTTGCCGCCTTCATCGTCCTTGTCGCCCCAGTTCCCGC--GGGAATCAA--TGCCAAGGCTGCCGCGCTGCCACGC
CGGTCAGCTTTCCATTGATGCCTCATGGGCGGCGCAGCGAAGGCGCGTTGACGCTCGTCCTGCCCGCTCCCGCCACGCGG
-CACACGGCGGCAGCTCTCCCACCGCCCATCCGCGGCTATAAAAGTCG-T-CCTCCCTCACCGGTGAATGCACA--A---
-------------GCTCTCGCCACCGACG---CC----------------------CTTCTCTCCACCTCTC--------
-GCCGCCGACGCCCCT-----CTCTCCCACTCTC-------------------------------TCCCC-GC-CGACGG
CAATGGCCGAGCGCTTCCCAGGCGACGGCGCGGCGGCGGACGGTTTCAGCCGCCACCATCTACACGACGACGAGGCGCGC
CTCCTTTACGAGGCCGACTACCCGGCGGC-CT-GGACATGCGGGTGCCGGG-CACCTGGAGGCTCAGCGCCGG
>chr1A_2183
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------------------------------------------------------------------TTAGAGCATCTCCA
GCCGCGCCCCCAATAG--GC-CCCC---AAGGCCCTTTTTTATCACGGGCGT-GAAAAAACAGCCCAGTCGCGCC-CTGA
GAAG-CCCAATTTTCACTGATTAGGGGCGGATTTGGCGCCGGCAGATCCAGGTCAAACTCGACGCGCT---GGGGG----
------TCGCCC----------GGGGGGTGCCGGGGGAAACA--GTTTTGGCGTGAAAGCCCGGCGGGCCCGCCGAGTCA
GTGACTAGACGTGTTCGTCGTCCTCATCACCCCGGTTTCCCGCGGGGAATCGA--TGCCAATGCTTCTGCACTGCCTCGC
CGGTCAGCCTTCCATTGATGCCTCATGGGCGGCGCAGTGAAGGCACG---ACGCGTGTCCCGCGCACTCCCGTCACGTGT
ACACACAGAGGCCGCCCTCTTGCCGCCCACCCGCGGCTATAAACGCCG-CGCCTCCCTCGCCGGTGAACGTACA--C---
-------------TCCTTCGCATCAGAACCCTCT----------------------CCCCTCTTGACCTCTC--------
-ACCGCCGACGCATGT-----CTCTCC---TCT------------------------------CTCCCCC-GC-CAACGA
CCATGGCCAAGCATTACCCAGGCGATGGTGCGGCGGCCAACGGCTTCGGCTGCCGCCACCTGCACGAGGACAAGGCACGC
CTCCTCTACGGGGCCGACTACCCGGCTCCGCT-GGACATGCGGGTGCCGGG-CTCGTAGAGGCTGAGCGCCGG
>chr1B_2183
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------------------------------------------------------------------TTAGAGCATCTCCA
GCCGTGCCCCCAACAAA-CC-CCCC---AAGGCCATTTTGCATCGCCAGCACCAAAAAATGGGCCCAACCGCGCC-CACA
GAAG-CCAACTTTTCATCGGTTAGGGCTGAATTTGGCGCCGACAGACCCAGGCCGAACCCGGTGCGCT---GGAGG----
------GCGCCT----------GGGGC--GCCGGGGGAAACA--GTTTTGGCACGAGAGCCTGGCGGGCCCGCCCAGTCA
GCGACCCGGCGCG-TCGTCGTCCTCATCGCCTCGGTTTCCCGCGGGAAATCAAAATGCGAAGGCTGCCGCACTGCCGCGC
CAGTCAGCCTTCCATTGATGCCTCACGGGCAGGGCAGTGAAGGCGCGGCGATGCACATCCCGCCCGCTCTCGCCACGCGT
ACGCACGGTGGCCGCCCTCTCACCGCCCACGCCCCGCTATAAAAGTCG-TCCCTCCCTCGCCGGTGAGAGCACA--C---
-------------TCCATCGCTACAGAAACTCTCTCTCCCCCTCTCAGCGCCGACGCCCCTCTCGACCTCTC--------
-ACC----ACGCGTGTCTCTCCTCTCC---TCTC-------------------------------TCCCC-GC-CGACGA
GCATGGCCGAGCAATACCCAGGCGATAGTGCGGCGGCCAACGGCTTCGGCCGCCGCCACCTGCATGAGGACGAGGCACGC
CTCCTCTACGAGGCTGACTACCCGGCGCAGC-CGGACATGCGGGTGCTGAG-CACGTGGAAGTTGAGCGCCGG
>chr7B_2183
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------------------------------------------------------------------TTAGAGCATCTCTA
GCCGCGCCCCCCAACAA-GC-CACC---AAGG-CCGTTTTTGTCGCTGGCGCCAAAAATTCTGCCCAGTCGCG-CCCCCA
GAAG-CACAATTTTCGCCGGTTAGGGCCGGATTTGGCGCCGGCGAACCCAAGCCGAGCCCGGCGTGCT---GGGGG----
------ACGCCCTGAGGCACTAGGGG-----------AAACG--TTTTTGGCGTGAAAAGA-AGTGGGCCCGCCGGGTCA
GCAACTCGCCGCCTTCGTCGTCCTCATGGCCTCGGTTCCCGC--GGGAATCAA--TGCCAAGGCTGCCATGTTGCCGCGC
CGGTCAGCCTTCCATTGATGCCTCACGGGCATCGCAGTGAAGGCGCGGCGATGCGCGTCCCGCCCGCTCCCGCCATGCGG
-CACACGGCGGCAGCCCTCCCACCGCCCATCCGCGGCTATAAAAGCCG-C-CCTCCCTCGCCGGTGAATGCACA--C---
-------------GCCCTCGCCATCGACA---CC----------------------CT-CTCTACCCCTCTTGCCACCGA
TGCCTCCGACGCCCCT-----CTCTCCCACTCTC-------------------------------TTCCCCTATCGTTGG
CAATGGCCGAGTGGTTCCCAGGTGACAGTGCAGCGGCGAACGGCTCCGGCCGCCGCCATCTGCACGAGGACAAGGCGCGA
CTCCTATACAAGGCCGACTACCCGGCGCC-CCCGAACATGTGGGTGCGGGG-CACCTGGAGGCTTAGCGCCG-
>chr3B_2187
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----------------------------------------------------------------------AGCATCTCCA
GCCGCGCCCCCAACGA--GG-CCCC---AAGGCATTTTTTTATCATCGGCGCCGAAAAATCGGTCCAGTCGCGTC-CCCA
GAAG-CCCACTTTTTACCGGTAAAGACTGGATTTGGCGCCGGCGGAACTAGGCCAAACCCGGGGCGTT---GGGGA----
------A-------------------------------AATA--ATTTTGCCGTGAAAGCCTAGCGGGCCCGCCGAGTCA
GCGACCGGGCGCGTTCGTCGTCCTCGTCGCCTCGGTTTCCCGCGGAGAATCAA--TGTCAAGGCTGTTGCGCTGCTGCCC
CGGTCAGCCTCCCATTGATGCCTCACAGCCGGCGCAGTGAAGGCGCGGCGACGTGCGTCCCGCCCGCTCCTGCCACGCGT
AGACACGGTGGCCACCCTCCCGCGGCCCACGCACGGCTATAAAAAGCC-GCCCTCCCTCGTCGGTGAGCGCACT--C---
-------------TCCATCGCCACAAAACCCTCC----------------------CCCCTCTCGACCTCTC--------
--CCGTCGACGCGCGT-----CTCTCC---TCTT-------------------------CCCCCTCCCCC-GA-CGATGA
GCATGGCCGAGCGCTACCCAGAGGATGGTGCGGCGGCCAACGGCTTCGGCCGCCGCCACCTGCGCAAGGACGAGGCACGC
CTCCTACACGAGGCCGACTACCCGGCGCC-GCCGGACATGCGGGTGCCGGG-CAATTGGAGGCTCAGCGC---
>chr5B_2187
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----------------------------------------------------------------------AGCATCTCCA
GCTGCATCCCCCAACAA-GCATCCC---AAGGTCTTTTTTTATCGTCGGCGCCGAAAAATCGGCCCAGTCGCG-C-CCCA
GAAA-CCCACTTTTTGCCGGTTAGGGCCGAATTTGGCATCGGCGAACCCACGCCGAACCCGGCGCGTT---GGGGA----
------ACGCCG----------GTGG-----------AACAG--TTGTTGACGCGAAAACA-AGCGGGTCCGCCGAGTTA
GCGACTCGGCGCCTTCGTGGTCCTCATCGCCTCGGTTCCCGC--AGGAATCAA--TGCGAAGGCTGCCGTGCTGCCTCGC
CGGTCAGCCTTCCATTGATGCCTCACGGGCGGCGCGGTG------------------TCCGGCCCGCTTCCGCCACGCGT
ACACACGGCGGCCGCCCTCTCGCCACCCACCCACGGCTATAAAAAGCC-GCCCTCCCTCGCCAGTGAACGCATG--C---
-------------TCCTTCGCCTCAGAACCCTCT----------------------CCCCTCTCGACCTCTC--------
-ACTGTCGACGCGTGT-----CTCTCC---TCT------------------------------TTCCCCC-GC-CGACGA
CCATGG----ACGCTACCCAGCCGACGGTGCGGCGGCCAACGGCTTCAGCCGCCGCCACCTGCACGAGTACGAGGCACGC
CTCCTCTACGAGGCCGACTACCCGGCTCC-GCCGGACATGCGGGTGCCGAG-TTCGTGGAGGCTGAGCACC--
>chr4A_2206
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---------CCAACAAGCCC-TCCC---AAGGCCCTTTTTTATCGCTGGCGCCGAAAAATCGACCCACTCGCG-C-CCCG
GAAAGCCCACTTTTTCCC-ATTAGGGCAGAATTTGGGGCCGGCGAACCCAGGCCGAACCTGGTGCACTAGAGGGGGCGCC
CGGAGG-CGCCG----------GGGG-----------AAACA--GTTTAGGCAAGAAAACCTGGCAGGCCCGCCGCGTCA
GCGACCGGGCGCGTTCGTCGTCCTCATCTCCTCGGTTTCCTGCGGAGAATCAA--TGCCAAGGCCGCCGA---GCTGCGC
AGGTCAGCCTTCCATTGATGCCTCATGGGAGTCGCGGTGAAGGCGCCGCAACGCGTGTCCCGCCCGCTCCTGCCACGCGT
ACGCACGGCGACCGCCCTCTCGCCGCCCACGCACGGCTATAAAAACCG-CCCCTCCCTCGTCGGTCAGCGCACA--C---
-------------TCCATCGCCACAGAACCCTCTC---------------------CCCCTCTCGACCTCTC--------
-ACTGCCGGCGTGCGT-----CTCTCC---TCTC-------------------------------TCCCC-GG-CGACGA
GCATGGCCGAGCGCTACCTAGGCGATGGTGTAGCGGCCAACGGCTTCGGCCGCCGCCACCTGCAGGAGGACGAGGCACGT
CTCCTCTACGAGGCCGACTACCCGGCACC-GCCGGACATGCGTGTGCCGGGGCACCAGTAGGCTCAGCACCG-
>chr5A_2224
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---------------------------------CCTTTTTTATTGCCGGCGCCGAAAAATTGGTTCAGTCGCG-C-CTCA
GAAG-CCTGATTTTCGGTGGTTAGGGTCGAATTTGGCGCCGGCAGACCCAGGCCGAAAGCGGCGCGCT---GGGGGCGTC
CGGAGGGCACCG----------AGGG-----------AAACT--GTTTTGGCGCGAAAGCCTGGCGGGCCCGTCGAGTCA
GCGACCAGGCGCGCTTGTCGTCCTCATCGCCCCGGTTTCCCGTGGGGAATCAA--TACCAAGGCTGTCGTGTTGCCACGT
CGGTCAGTCTCCCATTGATGCCTCACAGGCGGCA-----------CCGCGACGCGTGTCCCACTCGCTCCCGTCACGCAT
ACGCACGCATGCCGCCCGCTCGTCGCCCCT--GCCGCTATAAATGCCG-CCCCTCCTTCGCTGGTGAGCGCACG--CCCT
CCTTCACCAACCGTCT-----------------C----------------------CCCCTCTCAACCTTTC--------
-ACCGCCGACGTGCGC-----CT---C---TCTC-------------------------------CCCCC-GA-CGACAA
GCATGGTCGAACGCTACCCAGGCGATGGTGCAACGGCCAACGGCTTAGGCCGCCGCCACCTGCACGAGGACGACGCACGC
CTCCTCTACGAGGCTGACTACCAGACGCC-GCCGGACATGCGGGTGCCGGG-TTCCTGGAGGCTCAGCGCC--
>chr4D_2225
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----------------------------------CTTTTTTATCGCCGGCGTCGAAAAATTGGTGCAGTTGCGT--TCTA
AAAA-TTTATTTTTTGCCGGTTAGGATC-AAATTGGCGCCGGCGGACCCAGGCCGAACCCGGCGCGCT---GGGG-----
-------------------------------------AAACC--GTTTTGGTGCGAAAGCCTGGCGAGCCCGCCGAGTCA
GCGACCGGGCGCGCTCGTCGTCCTCATCGCCTCGGTTTCCCGCGGGGAATCAA--TACCAAGGCTGCCGTGCTGCCGCGC
CGGTCAGCCTTTCATTGATGCCTCACGGGCGACA---TGAAGGCGCGGCGACGCGCGTCCCACCCGCTCCCGCCACGCGT
ACGCACGGCGGCCGCCCTCTCGTCGCCCGCGCAGA-CTATAAAAGCCG-C-CCTCCCTCGACGGTGAGCGCACA--C---
-------------TCT-----------------T----------------------CCCCTCTCAACCTCTC--------
-ACCGCCGACGCGCGT-----CTCTCC---TCTC-----------------------------TTCCCCC-GA-CGACGA
GCATGGCTGAGTACTACCCAGGCGATGGTGCGGCGGCCAACGGTTTTGGCCGCCGCCACCTGCACAAGGACGAGGCACGC
CTCCTGTACGAGGCCGACTACCCGGCGCC-GCCGGACATGCGGGTGTCGGG-ATTCTGGAGGCTCAGCGTCGG
>chr2D_2270
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-AAG-CCCAATTTTCGCCGGTTAGGGCCGAATTTGACGCCGGCGGACCCAGGCCGAACCCGGCGCGCT---GGGGG----
------GCGCCG----------GGGG-----------AAACA--TTTTTGGCGCGAAAAGG-AGTGGGTCCGGCGAGTCA
GCGACTCGCCGCCTTCGTCGTCCTCGTCGCCTCGGTTCCTAC--AGGAATCAA--TGCCAAGGCTGCCGCGCTGCCACGC
CGGTCAGCCTTCCATTGATGCCTCACGGGCGGCGCAGTGAAGGCGCGGCGACACGCGTCCCGCCAGCTCCCGCCATGCGG
-CACACGGCGGCAGCTCTCCCATCGCCCATCCGCGGCTATAAAAGCTG-T-CCTCCCTCGCCGGTGAACGCACA------
-----------------------------------------------------------------AGCTCTC--------
-ACCGCCGACGCCCTT-----CTCTCC---ACCTCTCGCACCGATGCCCCTCTCTCCCACTCTCTCTCCC-GC-TGACGG
CAATGGCCGAGCGCTTCCCAGGCGACGGCGCGGCGGCGAACGGCTTCGGCCGCCGCCATATGCACGAGGACGAGGCACGC
CTCCTCTACGAGGCCGACTACCCGGCGCC-CCCGGACATGCGGGTGCCGGG-CACCTGGAGTCTCAGCGCCGG
>SNPs
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--
--S----------S----S---S-S--------------S-------S----------------------------S---
------------------S--------------S------S---S----S------S----S------------------
--------S--S--S---S----S---S-----S--------------------S------S--------SS------S-
--------------S-------SS----------------S--------S--------------------S---------
--SS--S------------S-S-------------------S---------S---S----S-------------------
------S-----S---SS-------S--------SSSSSSSSSSSS--------S-------S------S------S--S
---S---S----------S----S---S--S-S-------S------S----------------------S---------
----------------------S-------------------------------------S-------SSSSSS------
------S------------------------SS---S-S-------------S-----SSSS------------------
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------------------------------------------------------------------------S-------
--------------------------------------------------------------------------S-----
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---------------------------------S----SSSSSSS-SSSSSS---------------------S-S--S-
------------S--------------------------------------S--------S-----S-------------
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---------------------------------------S----------------------------------------
----------------------------S---------------------------------------------------
----------------------------------S--------------------------------------------S
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-----------------------S--------S------S----------------------------------------
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------------------------------------------------------------------S-------------
----------------------------------------------------S------------S----------S---
-----------------S--------------------------------------------------------------
-----------------S--------S--S---S--S------------S-------------SSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S----------
--------S--------------S--S-----------------------------------------------------
---------------------------------S---------------SS-----S--------SSS-------S----
----------S--------------------------------------------S------------------------
----------------------------------------------------------------S---------------
-----------------------------------------------S--------------------------------
---------------------------------S--------------S-------------------------SS----
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--------------------S--------------S--------------------------------------------
--------------S-----S----------------------------------------------------
>forward_1409
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-----------------------------AAGTTCCAAGTGCCAAAGCG-------------------------------
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>reverse_3763
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--GATCATGTCGAGTCCGGACC----------------------------------------------------------
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-------------------------------------------------------------------------
