>input_sequence_67171
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----------------------------------------ATGCCGGGCCTCACCATCGGCGACACCGTCCCCAACCTGG
AGCTGGACTCCACCCATGGCAAGATCCGGATCCACGACTACGTCGGCAACGGCTACGTCATCCTCTTCTCACACCCCGGT
ATGTACATACTGCCTTCATGGCCATCTGCCTTGGGCCTGCTCGTAGTCCTTGTGTGATC---TTGTGGTGCTAATTGATT
GTCTGCGCTTCTGTACTGTTCAGGTGATTTCACCCCGGTGTGCACGACGGAGTTAGCGGCGATGGCCAACTACGCCAAGG
AGTTCGAGAAGCGGGGCGTGAAGCTGCTGGGCATCTCCTGCGACGACGTGCAGTCCCACAAGGAATGGACCAAGGACATC
GAGGCCTACAAGGTTG----------------------------------------------------------------
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---------------GACGATAATCTATGATTGATCTCGATCTGAAAATTCTTGGTTGCT--------------------
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---------------------------------GATTCGCCATGGCTGGCTAA------TCTCTGCCCTCGCGCGTGCAG
CCTGGGAGCAAGGTGACGTACCCGATCATGGCGGACCCGGACCGGTCGGCCATCAAGCAACTGAACATGGTCGACCCCGA
CGAGAAGGACGCGGAGGGGCAGCTGCCGTCCCGCACCTTGCACATCGTGGGGCCGGACAAGAAGGTGAAGCTGAGCTTCC
TGTACCCGTCGTGCACGGGGCGGAACATGGACGAGGTGGTGCGCGCCGTGGACTCGCTGCTGACGGCGGCCAAGCACAAG
GTGGCCACCCCGGCCAACTGGAATCCCGGGGAGTGCGTGGTGATCGCGCCCGGCGTCTCCGACGACGAGGCCAAGAAGAT
GTTCCCGCAGGGGTTCGAGACTGCCGACCTGCCCTCCAAGAAGGGGTACCTCCGCTTCACCAAGGTCTAG----------
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>chr2B_1_TraesCS2B01G174400
AAAAATGGTTGCGTAGTTTAAAAAAAGTTCAAATTGTATTTGAAATTTTTTGACCAGGTTTTTCAGTAAGTGTTCCAAAC
CACACCTTAAAGGAGAAATGTACATTATGCATTTAAAAAATGTTCAACATGTCTAAGAAAAATGGTTCACGTGTCCACTA
AAAATGTATATTCTGTACTGCAAAAGTAGACATGTGTTAAGAAAGAAAAAACAATAAAAAATAACAAAAAAAATCTACTA
TAAAGCTGGAAAGAAAAACTGGTAAACATTAAAAAAGGAAGAAAAAACTCAGTAAAAACACGAAAAGAAACAAACAAACT
CGATAAAAAAGGAAAACTGAAAAGGGAGAAAAATGAGTGACAAAAAAAGAGAAACATAATAACCGAGCCTAAACCAGTAC
AACCAAACAAAACCACAAGCTTGTCGATCGAAACCCAGCAAACAAAAGAACACGAAAAATGGACCACTCTAGTAGTTACA
CGCGGAAGAAATCCTTAAGATGAGCGGTCTCTACATTTTCTTTTAGACAATCCCTCGAAGCTTTATTGAACCATAACAGT
AATTACAATGTTTACAGAGAGGAAAGGAAGATCACCGAATTGCCAATCTATCAAAGCATACTTTAACACGGAATCTAGTA
TTATTCAGCTCACGAACGATGTTCTTCTCGAAAGAAAAAGGCTCACGAACGATGCCGCAGCTCGCACAGGTGGCCGTGAG
CTTCTGAGTGACTTGGCCACATGGCATATCCACTGCCCCGCTAGACGGTGCGGGTGAGTGGACAGGTCAAGCGCATTGAA
CAAGGTCTCCGGGCGGGCTGCCACGAGGCCAACTACGTGGCCCTCATGCAACGCACCTTGCTGCCACTTCTACACACACC
CTCGCCGGCCGACCGCTCCTATAAAAGGAGCTCCCCGGTGAATCCTCGCCGGCATCCATCGAGAGACGTTCGCAGCAGCA
AAGAGCACGCAGCAGCTAGCTTTGAGTTGTTTCATCCATCATGCCGGGCCTCACCATCGGCGACACCGTCCCCAACCTGG
AGCTGGACTCCACCCATGGCAAGATCCGGATCCACGACTACGTCGGCAACGGCTACGTCATCCTCTTCTCACACCCCGGT
ATGTACATACTGCCTTCATGGCCATCTGCCTTGGGCCTGCTCGTAGTCCTTGTGTGATC---TTGTGGTGCTAATTGATT
GTCTGCGCTTCTGTACTGTTCAGGTGATTTCACCCCGGTGTGCACGACGGAGTTAGCGGCGATGGCCAACTACGCCAAGG
AGTTCGAGAAGCGGGGCGTGAAGCTGCTGGGCATCTCCTGCGACGACGTGCAGTCCCACAAGGAATGGACCAAGGACATC
GAGGCCTACAAGGTTG----------------------------------------------------------------
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---------------GACGATAATCTATGATTGATCTCGATCTGAAAATTCTTGGTTGCT--------------------
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---------------------------------GATTCGCCATGGCTGGCTAA------TCTCTGCCCTCGCGCGTGCAG
CCTGGGAGCAAGGTGACGTACCCGATCATGGCGGACCCGGACCGGTCGGCCATCAAGCAACTGAACATGGTCGACCCCGA
CGAGAAGGACGCGGAGGGGCAGCTGCCGTCCCGCACCTTGCACATCGTGGGGCCGGACAAGAAGGTGAAGCTGAGCTTCC
TGTACCCGTCGTGCACGGGGCGGAACATGGACGAGGTGGTGCGCGCCGTGGACTCGCTGCTGACGGCGGCCAAGCACAAG
GTGGCCACCCCGGCCAACTGGAATCCCGGGGAGTGCGTGGTGATCGCGCCCGGCGTCTCCGACGACGAGGCCAAGAAGAT
GTTCCCGCAGGGGTTCGAGACTGCCGACCTGCCCTCCAAGAAGGGGTACCTCCGCTTCACCAAGGTCTAGGCGTGCGTCC
GTGCTAGCTCGTCGGCGCCTGCTCGGTTACTC-----GTGGCGGTCTGTGTCGTTGTGGTCCGTGCGTACTTTTGTGGTG
GTACGTGTCGTTTCTTCTGTAAATCTACCAGCGTCTCCGAGCTATGTATGTGTACTGTGACTTTGTCTCTTTCATGTGTT
TTTTTTTTTTGCGGGGGTCTCATGTGTTCGATCGCCGGTATATCCATG-------------TGTTGGTCGCTTGCTGTAC
TGTTTGGAAAACTGCTTTGCAGTGTTTGGACTTGGACGTACGGCGACACGTATCAGCACGGCTGCTGCGCAATCCACGCT
GCCGCGCCGCTTGGTCGTGGCCTAAATGCGGGCTATGCAAGCCGGCTCCTCGGCCGTGCCTCCCTGCTCTGACGTGCCTC
CCTGGAAACTTGACTGTAGAATAAAAACAGGGGAAAAAAACGGTTAAAAGCACAGACAGGCACGTGTTTTTTTTTTGCGG
GGCAAACAGGTATTTTATTCCTCTTGTATAGTGTTACAGTCAGCTAACACAAAGCTTGAAACACTGTGTGGAACTCGGTG
CAACCAAC------------------------------------------------------------------------
--------------------------------------------AGTATGAGATATCCATGAA-----------------
---------------------------------------------------------TCTGACCTTTGAAAACTGAGAGA
TAGGCCCTCCAGTACGGCACTAATCTCAGCTTCTAATGCATCTTTGCAATGAAACAAGTACCTATACGCAGAGAAGATAA
CCGTTCCTTCTGAATCTCTCAGGAGCCTTCTGAATCTCTCAGGAGCATGCCTGTCCCTGCTAATCCTGTATCTTGAACAG
ATGGTTCATCAGTGGAAAGAGCAACCCACCCAACCGGTGGTTTTCCTTGCTGACAGTAGTTCCTTGCTGACAGTAGTTGT
TCTGAAGGGAAACTCCATCACTGGCATTTTTCCTTTAACAATATCTTTCACCGAGTACTTTTGCGCCTGGTTATAAGAGG
ATCGATAGCT---------GGTTTTAGATATTTCTGCAGGAGGAGCTAATGTACCATGTAGCACATCATTTCTTAGACTC
CAGATAC
>chr2D_675
AAAAAGAGTTGACGG-----------------------------------------------------------------
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------------------------------------------------ACGATGCCGCAGCTCGCACAGGTGGCCGTGAG
CTTCTGAATGGCTTCGCCACACGGCATGCCCACTGCCCCGCTGGACGGTGTGCGTCGGTGGGCAGGTCAAGCGCATTGAA
CAAGGTCACCCGGCGGGCTGCCACGAGGCCAAGTACGTGGCCCTCATGCAACGCGCCTTGCTGCCACTTCTACACACACC
CTCGCCGGCCTACCGCTCCTATAAAAGCAGCTCCCCGGTGCGCCCTCGCCGTCATCCATCGAGAGCAGTTTGCAGCATCA
AAGAGCACGCAGTAGCTAGCTTTCAGTTC-TTCATCCATCATGCCGGGCCTCACCATCGGCGACACCGTCCCCAACCTGG
AGCTGGACTCCACCCATGGCAAGATCCGCATCCACGACTACGTCGGCAACGGCTACGTCATCCTCTTCTCCCACCCCGGT
ACGTGTGTAC-GCCTTCACGGCCTGCTCGA----------TCGTAATCCTTGTGAAGTTCTGTTCTGGTGCTGATTGGTT
GTCTGCGGCTCTGTACTGTTCAGGTGATTTCACCCCGGTGTGCACGACGGAGCTGGCGGCCATGGCCAACTACGCCAAGG
AGTTCGAGAAGCGGGGCGTGAAGCTGCTCGGCATCTCCTGCGACGACGTGCAGTCCCACAAGGAGTGGACCAAGGACATC
GAGGCCTACAAGGTTTGTTAGCACTAATCTTGACGTGTGTGATTCTGTTAGCAGCCGAGTCCCGCGGATGTTACGAGCGG
GGCGTCCGGTGGAGTTGCCCAGTCCTGGAGTGCATGGATAAGGTAGTTATCTAGTTGCATGCATGTAGCTAGTGGGTTAG
TGGCCCGGTCATGTGGTAGTGGCCGGTGTGGTGCATGCGTGCTGTAGTTAGTGCTTGGGGTTAGTGGCCGATCTGGGCGG
CTGGGCTGGGCGTAAGTCTGTGTATTAAAAGGGCCCCGGTGCTGTTGTGTAGAGGAGCCGTGAGAGCTGGCAGAAAAGAT
GTAGCACTTGTGTGACCCAGGAGGAGAGCCTCTTGGCAAAGCTAGTTGGCTTCCTTCCCTGGTGTGTGTGTGCGTGTGTT
TTTTCTGGGTTTCTTCCATGGTGTGTGTTCTTGAGAGAACCAAGAGGAAGGGAGAGTTGTGTGAGGAAGAAGAAGCGGCG
TTCCGAGGAGCGGCGGCGCCAACATTTGGTATCATGAGCTTGGTGTCTTGGGCGTGCTTGCCGTGCCGGAGGCGTGGCAG
CGATGGTGGCGCTCGCCGGCGGCTGCGCGATGGAGCTCCGGGCCGTGTGTCGGCCCATGGAGGTGGGCGGCGCTGTGGCT
CTCATGGCGCGTGGCGGATGCGGCGGGCGGTGACGTCGTGCGTGCGGCGACCACGGAGGCCGCCGAGGCGCTGCGTGGTG
GCGCGGCGGCGCAGCACGGCATGGCGGCATGGAGGCCGCAGCGGTGCAGGGCAATAAGACGTGGCGGCGAGCCGGACGCG
ACCGGTGCGTGTTATGGGCGCGCACTGGACGTGTCGAGCGCGTCGGGACCGCGGGAGTGGACCGCGTCGAGGCGCTGGAC
CTGGTTGCGCAGACCGCGTACGTGCGCGGCGGGAGCGCGGGCTGGGAGCGCGGGGACGTGGGGAGTGTGCGCGAAGGGCA
CGGCGGTCGCGGAGACGAGGAGGTCGCGAAAGACCTTCGTGGTGGCGCAAAGGTCGCGACGGCTCGGGGCGACAACCGTG
GAAGGTGCGTGGCACGGAGGCGCGGCGTGGCGGCTGCCATGGCGGACGCGGAGGCGACACGCGGTGAGCGTCTGGTGCTG
TCGGGTTCGTCGGGCACGTCGGATGCGTGCGGGACGTGCGGGACGCAGAGGGATGCCAGGCGTGTGTCGCTGGTGGAGAT
GGAGCTCGGCGTGTGTCGCCGGAGTCGTGACGGAGCACGGTGCGACCGGCGTCGTTGCGCCAGGTCGGGTCCGCAAGCTG
GGTCACGCTCGTGACGACGATAACGACGGCAGCTGCAACAACTTCGACGACGGCAAGGCGTGTCAAGATTAAGGGGGGGA
ATGTTAGCACTAATCTTGACGTGTGTGATTCTGTTAGCAGCCGAGTCCCGCGGATGTTACGAGCGGGGCGTCCGGTGGAG
TTGCCCAGTCCTGGAGTGCATGGATAAGGTAGTTATCTAGTTGCATGCATGTAGCTAGTGGGTTAGTGGCCCGGTCATGT
GGTAGTGGCCGGTGTGGTGCATGCGTGCTGTAGTTAGTGCTTGGGGTTAGTGGCCGATCTGGGCGGCTGGGCTGGGCGTA
AGTCTGTGTATTAAAAGGGCCCCGGTGCTGTTGTGTAGAGGAGCCGTGAGAGCTGGCAGAAAAGATGTAGCACTTGTGTG
ACCCAGGAGGAGAGCCTCTTGGCAAAGCTAGTTGGCTTCCTTCCCTGGTGTGTGTGTGCGTGTGTTTTTTCTGGGTTTCT
TCCATGGTGTGTGTTCTTGAGAGAACCAAGAGGAAGGGAGAGTTGTGTGAGGAAGAAGAAGCGGCGTTCCGAGGAGCGGC
GGCGCCAACAAGGTTCGCCCATAATCCGTGTTCGATTAGCCATGCATGGTTGGTTAATTTCTCTGTTGTCGCGCGTGCAG
CCTGGGAGCAGGGTGACGTACCCGATCATGGCGGACCCGGACCGCTCCGCCATCAAGCAGCTCAACATGGTCGACCCGGA
CGAGAAGGACGGCCAGGGGCAGCTGCCGTCCCGCACCCTGCACATCGTGGGGCCGGACAAGGTGGTGAAGCTGAGCTTCC
TGTACCCGTCGTGCACGGGGCGGAACATGGACGAGGTGGTGCGGGCCGTGGACTCGCTGCTGACGGCGGCCAAGCACAAG
GTGGCCACCCCGGCCAACTGGAAGCCCGGGGAGTGCGTGGTGATCGCGCCCGGCGTCTCCGACGAGGAGGCCAAGAAGAT
GTTCCCGCAGGGGTTCGAGACCGCCGACCTGCCCTCCAAGAAGGGGTACCTCCGCTTCACCAAGGTCTAGGCGTGCGCCC
GTGCTAGCTCGTCCGCGCTTGCTCGGTTACTTCACTTGTGGCGGTCTGTGTCATCGTGGTGCGTGCGTACTTTTGTGGTG
CTTTATCTCGTTTCTTCTGTAAATCTACTAGCGTCGCCGAGCTATGTATGTGTACTGTGACTTTGTCTCTTTCATG----
------------------------TGTTCGATCGCCGGTATACATGGGTGTGTGTTGGGACTGTTGGTTGCTTGGTGTCT
CGTTTGGAAAACCGTTTTGCAGTGTTCTTGATGG-----ACGGCGACACGTATCAGCACGGCTGCTGCG-----------
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>chr7A_2309
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-------------------------------------------------------------------TTTTTTTTTGCGG
GGCAAACGGGTATTTTATTCCTCTTGTATAGTGTTACAGTCCGCTGATACAAAGCTTGAAACACTGTCTGGAACACGGTG
CAACCAACAGGCGGTGCTACCTCCAGTACGACCTATATTAGCTAGACAATGAGCAACACTATTTTGATTACGATCTATTT
TCTGCGGAATAAAACAACGCGTCTCCAGGAGCTTCTTAATTTCCAGTATGAGATGTCTATGAGCAGATTTGTCCAAAGAT
TCATCAGTCAATGCAGCAATCAATATAGAGCAGTTAGATTGAATCATAACCGGTGATTCTGACCTTTGAAAACTGAGAGA
TAAGCCCTCTAGTACGGCACTAATCTCAGCTTCTAATGCATCTTTGCAATGAAACAAGTGCCTGTACGCACAGAAGATAA
CCGTTCCTTCTGAATCTCTCAGGAC--------------------CATGCCTGTCCCAGCTAATCCTGTATCTTGAACAA
ATAATCCATCAGTGGAAAGAGCAACCCACCCAACCGGTGGTTTGGGCCATGGTAGAAT-TTCCTTGCTGACAGTAGTTGT
TCTGACGGGAAACTCCACCACTGGCATTTTTCCTTTAACAATATCTTCAACCGAGTACTTTTGCGCCTGGTTATAAGAGG
ATGGATAGCTGCGCAAAAAGGTTTTAGATATTTCTGCAGGAGGAGCTAATGTACCATGTAGCACATCATTTCTAAGACTC
CAGATAC
>SNPs
-----SS----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------------
-------S--S---S------S-----SS-------------S-------S-S--SS----S------------------
-------S--S---------------------S---------------------S-------------------------
----------S----------------S------------SSS--------S-------------SS---S------S--
------------S----------S----SS--------------------------------------------------
----------------------------S-----------------------------------------S---------
-S--SSS---S-------S----SS--SSSSSSSSSSSSS-----S--------SSS-S-----S-------S----S--
-------SS-------------------------------------------S-S-----S-------------------
----------------------------S-----------------------------------S---------------
---------------S----------------------------------------------------------------
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-----------------------SSSSS-SSSSSS-SSS-S--SSS-SSS-SSSSSS--S--------------------
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-------------------------------------S------SS---S-SS------------SSS------------
----------S---------------------------------S--S-----------S--S--------------S--
-----------SSS-----------------------S-----------------------SS-----------------
-------------------------------------------S------------------------------------
-----------------------S-----------------------------------------S--------------
---------------------S-------------------------------------------------------S--
-------------S----S------------S--------------------S-S-----S-------------------
S-SSS-S---------------------S------S----------------------------------------SSSS
SSSSSSSSSSSSSSSSSSSSSSSS------------------SSSSS---------------------S-----S---SS
S-----------S-S-----------SSSSS-S-SSSSS------------------------------SSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------
-------S---------------------------------S---S-S-------------------S------S-----
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------------------------------------------------------S--S----S-----------------
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--S------S-------------------------------------------------S---S------S---------
------------------------SSSSSSSSSSSSSSSSSSSSS------------S---------------------S
--SS-S-------------------------------------SSSSSSSS-SSSSSSS---------------------
-----S-----------S-----------------------------SS-------------------------------
--S----------------------------------------------------------------------S------
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>forward_440
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--------------------TTGTCGATCGAAACCCAGCA----------------------------------------
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>reverse_3741
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------------------------------------------------------------CCGTGCGTACTTTTGTGGTG
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