>input_sequence_67159
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-----------------------------------------------------------------ATGGCGCCTGCTCGG
GAGCTCCAAGAAACCTCGTCGTCCTCGTCGTCATCGACGTCGTCGTATACGACCAGCTCCACGTCCATGTCGTGCTCGTC
CACCGTCACGGACTCCTCGTCGTGTCCCTCCTCGCCGGCGAGCGCCGCCAATGCCGTGAAGGCGGCGCCGCGCAAGCGGC
AGCTGGACGAGGGAGAGGGAGGGCAGGAGGAGACGGAGGAGGGGAAGACGACGACGACGGCGACGACGACGAAGAAGA--
-GCAAGCGTAGCAGCGACGGGAAGCACCCGGTGTACCGCGGCGTGCGGATGCGGGCGTGGGGCAAGTGGGTGTCGGAGAT
CCGCGAGCCACGCAAGAAGTCGCGCATCTGGCTCGGCACCTTCCCCACCGCCGAGATGGCCGCGCGCGCGCACGACGTCG
CCGCGCTCGCCATCAAGGGCGCCCGGTCCGCGCACCTCAACTTCCCGGAGCTCGCCGACGTCCTCCCGCGCGCCGCCTCG
CCGGCGCCCAAGGACGTGCAGGCCGCCGCCGCATTGGCCGCCGCGTTCACGTCTTCGCCGCCGCCCTTGTCCACGGATCA
GTCGGAGTCGGAAGAGGGCCTCATCCAAGAGGAGACCGTCAAGAACGACGCCGGCGCGGGCGCCACCGCGCCGCCGGAGT
CTGCCGCCACGGCTACGAGCTGCGGCGGCGCCGCTGAGCAGGCGGAGGAGGAGGAGCTGCGGCAGCTGTTCGACCTGCCG
GACCTGCTCATCGACATCGAGGACGGATTCGGATTCTCCACCATGTGGGCTCCGCTCCCCGACGTCGAGGAGGTCAATGC
AGACCTCCGGCTCGAGGAGCCGCTCCTTTGGGAGTAG-------------------------------------------
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>chr1A_1_TraesCS1A01G220000
CATATCGGACAACTACAGTTATCATGATTTTGG-AAAACTTTAAGAGTTGCCACCTACTAACACTAGACAGTTGTCATGT
AACGTTGCAAAACAGACGTGGCAACAATAACATGTT-CGGGT-AAAAAGAGAGTTGCTATATGCTTATAAGCATGCTAG-
GGTAGTTGCCATGTATCCTGCAAAACACATGGCAACTGATGGCTTTTGGTGTGTGGGAGAGGAGACGGGAGGGCAGTTGC
CATGTATCCTGCAAAACACATAGCAAACTGATGGCTTTTGGTGTGTGGAAGAGGAGACGGGAGGGCAGTTGTCATGTATC
CTGCAAAACACA--------------------------------------------------------------------
---TGGCAACTGATGGTTTTTGGTGTGTGGGAGAGGAGACGGG-CATGTGGGTGACGGTGGTATCTTTAGGAGTTGCCAC
CTACTAACACTGGACAGTTGCCATGTAGCACTAA-AAAACATGGCA------AAAAACATGTTACGGGTAAAAAGAGAGT
TGCCATCTGCTTACAATCACAAATAGGGCAGTTGCCATGTACCCTTCAAAAA-CATGGCAAA-TGACAGCTTAGGTGTGG
GAGAGTGGGTGAATGGCAGTCGTGAGAGATGTGAAATAGGAGTGGTGCGTGGCGTGCGGGCGCGACAGCAGTTCCACCGC
ACGCCCCGACTGGCGAACGTTGGCCGCGGAGAGAAAACAGGCGTGTGGGCGAACTCCCCCACATGCCACACACACGAGTG
GTCCTACGTGGCACATAAAATCAA-TCTTTTTATGCCAAGATTCGTGCAAAAGGCGTTGGACGGTGATGTAGGTGTGTGG
GCGAGTTGGCTAACATCCACACGTGTGGGCGTTAACATTTTCGTTCTTAATTAGCTTTTTCACCAGTAAACTTTTCTCCC
ACCTCCCTCTCTCTCATATAAA-CCCCCACTGCAGATACGAACAGACACACACCACCGCAAGTCCAAGGCGGAGCGGCAA
GCAAAGCCA------------------ATACTCCTTCCCTCGTCGTGCACCCACTGCACGCGACCATGGCGCCTGCTCGG
GAGCTCCAAGAAACCTCGTCGTCCTCGTCGTCATCGACGTCGTCGTATACGACCAGCTCCACGTCCATGTCGTGCTCGTC
CACCGTCACGGACTCCTCGTCGTGTCCCTCCTCGCCGGCGAGCGCCGCCAATGCCGTGAAGGCGGCGCCGCGCAAGCGGC
AGCTGGACGAGGGAGAGGGAGGGCAGGAGGAGACGGAGGAGGGGAAGACGACGACGACGGCGACGACGACGAAGAAGA--
-GCAAGCGTAGCAGCGACGGGAAGCACCCGGTGTACCGCGGCGTGCGGATGCGGGCGTGGGGCAAGTGGGTGTCGGAGAT
CCGCGAGCCACGCAAGAAGTCGCGCATCTGGCTCGGCACCTTCCCCACCGCCGAGATGGCCGCGCGCGCGCACGACGTCG
CCGCGCTCGCCATCAAGGGCGCCCGGTCCGCGCACCTCAACTTCCCGGAGCTCGCCGACGTCCTCCCGCGCGCCGCCTCG
CCGGCGCCCAAGGACGTGCAGGCCGCCGCCGCATTGGCCGCCGCGTTCACGTCTTCGCCGCCGCCCTTGTCCACGGATCA
GTCGGAGTCGGAAGAGGGCCTCATCCAAGAGGAGACCGTCAAGAACGACGCCGGCGCGGGCGCCACCGCGCCGCCGGAGT
CTGCCGCCACGGCTACGAGCTGCGGCGGCGCCGCTGAGCAGGCGGAGGAGGAGGAGCTGCGGCAGCTGTTCGACCTGCCG
GACCTGCTCATCGACATCGAGGACGGATTCGGATTCTCCACCATGTGGGCTCCGCTCCCCGACGTCGAGGAGGTCAATGC
AGACCTCCGGCTCGAGGAGCCGCTCCTTTGGGAGTAGCAGATGCTTGCGAAGACTAGATGATCAAATATACTAGGAGTAC
TTAATCGCTAGTGTAATCTCTTCTTTGCCTTTCTTTTTTTTACT---------ACTAGCGTTTTTTTTAGTTTGCCTTTT
TTCTTTTACTTTGCTGGTTTA--ATAAGCACAAGGGAGTACGTAGTGATATACATATGC-AAAAAAAGTTTGCTACTACC
ACTACTACATGTTACCTGAGAGAGTTAATTATCAGTACTATTACCACATAGTAATGTGTGAATCCTAGTGGTTTGACCTT
GCCATCAGATTATTGGGTGATTGTACTGTAT------------TCGTTATGCTTGGAATACTCGTTGTACTGCATTGAGT
CTCCCCAGAAAAAAAGAGAGTATAAATTTGAGTGTCATGCCATGGAGACTGAGATGAGAAGAAGGAATAGAATGCCAGGA
AGCTCGAAGTTAAGAGGCCACTGAAGCTGACTTTGAAAACTTAATCTATTCCACTTCCACCCCTCACTTGTTTATCAGCA
AGTGATGTTGCTCAACAAGAGGTGCTTTGCCACTGCCAGCAATTTCATGTTTCTTTATCAGCATTCAGATCCTGTCGTAA
ACACCATGCTGAACTTTATTAGTTTGTTC----AGTGAAGTTGGGAGAAGAAGGAAGCTCTTTTACTATTCAAAAACAGC
AG-AAAAAAGGGTTAAAAATGTTGATTTGTGGATATGAGGTTGTCTGGCTAGTGTTGGTCTCCCCCATGATCAAGCAAGC
AGAGGCG-----GTGCAGACAAAAGGTGGCACTCCTCATGTGGCTCCAGTGCAGCATCTCATCATCATCAACTTCT---T
CTTCTTCTTCTTCCTCTGGCTTCCCCTGCTTTTTTCTC-CCTTTTGCCATCTGCTTTGGAAAGCTGCTGCTGATCAAGAC
GAGAGAATGAGATTCTTCTTCT---------TCTTTTCCTTGTGGGAGAGAGAGAGGAGTGAGGTTATTTTAAGCATGGC
CATCATTTCCAGTGGGAAAGCTAATGCTCCCACTTACCAAGCAT
>chr1A_1
CATATCGGACAACTACAGTTATCATGATTTTGG-AAAACTTTAAGAGTTGCCACCTACTAACATTGGACAGTTGCCATGT
AGCACTAAAAAACATGGC-A-----AAAAACATGTTGCGGGT-AAAAAGAGAGTTGCCATCTGCTTACAAGCATGCTAGA
GGTAGTTGCCATGTATCCTGCAAAACACATGGCAACTGATGGCTTTTGGTGTGTGGGAGAGGAGACGGGAGGGCAGTTGC
CATGTATCCTGCAAAACACATGGCAAACTGATGGCTTTTGGTGTGTGGGAGAGGAGACGAGAGGGCAGTTGTCATGTATC
CTGCAAAACACA--------------------------------------------------------------------
---TGGCAACTGATGGCTTTTGGTGTGTGGGAGAGGAGACGGG-CATGTGGGTGACGGTGGTATCTTTAGGAGTTGCCAC
CTACTAACACTAGACAGTTGCCATGTAACGCTGC-AAAACAGACGTGGCAACAATAACATGTT-CGGGTAAAAAGAGAGT
TGCCATATGCTTACAATCACAAATAGGGAAGTTGCCATGTACCCTTCAAAAA-CATGGCAAA-TGACAGCTTAGGTGTGG
GAGAGTGGGTGAATGGCAGTCGTGGGAGATGTGAAACAGGAGTGGTGCGTGGCGTGCGGGCGCGACAGCAGTTCCATCGC
ACGCCCCGACTGGCGAACGTTGGCCGCGGAGAGAAAACAGGCGTGTGGGCGAACTCCCCCACATGCCACACACACGAGTG
GTCCTACGTGGCACATAAAATCAA-CCTTTTTATGCCAAGATTCGTGCAAAAGGCGTTGGACGGTGATGTAGGCGTGTGG
GCGAGTTGCCTAACGCCCACACGTGTGGGCGTTAACATTTCCGTTCTT--------------------------------
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>chr5A_1
CATATCGGACAACTACAGTTATCATGATTTTGG-AAAACTTTAAGAGTTGCCACCTACTAACACTGGACAGTTGCCATGT
AGCACTAAAAAACATGAC-A-----AAAAACATGTTGCGGGT-AAAAAGAGAGTTGCCATCTACTTACAAGCACGCTAG-
GGTAGTTGCCATGTATCCTGCAAAACACATGGCAACTGATGGCTTTTGGTGTGTGGGAGAGGAGACGGGAGGGCAGTTGC
CATGTATCCTGCAAAACACATGGCAAACTGATGGCTTTTGGTGTGTGGGAGAGGAGACGGGAGGG---------------
--------------------------------------------------------CAGTTGTCATGTATCCTGCAAAAC
AGATGGCAACTGATGGCTTTTGGTGTGTGAGAGAGGAGACGAG-CATGTGGGTGACGGTGGTATCTTTAGGAGTTGCCAC
CTACTAACACTAGACAGTTGCCATGTAACGCTGC-AAAACAGACGTGGCAACAATAACATGTT-CGGGTAAAAAGAGAGT
TGCCATATGTTTACAATCACAAATAGGGCAGTTGCCATATACCCTTCAAAAA-CATGGCAAA-TGACAGCTTAGGTGTGG
GAGAGTGGGTGAATGGCAGTCGTGGGAGATGTGAAACAGGAGTGGTGCGTGGCGTGCGGGCGCGACAGCAGTTCCATCGC
ACACCCCGACTGGTGAACGTTGGCCGCGGAGAGAAAACAGGCGTGTGGGCGAACTCCCCCACATGCCACACACACGAGTG
GTCCTACGTGGCACATAAAATCAA-CCTTTTTATGCCAAGATTCATGCAAAAGGCGTTGGACGGTGATGTAGGCGTGTGG
GCGAGTTGGCTATCGCCCACACGTATGGGCGTTAACATTT----------------------------------------
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>chr3A_1
CATGTCGGGCAACTACAATTATCATGGTTTTGGAAAAACTTTAAGAGTTGCCACCTACTAACACTGGACAATTGCCATGT
AACACTAAAAAACATGGCAA-----AAAAACATGTTGCGGGT-AAAAAGAGAGTTGCCATCTGCTTACAAGCACGCTAG-
GGTAGTTGCCATGTATCCTGCAAAACACATGGCAACTGATGGCTTTTGGTGTGTGGGAGAGGAGACGGG-----------
-------------------------------------------------------------AGGGCAGTTGCCATGTATC
CTGCAAAACACATGGCAACTAATGGCTTTTGGTGTGTGGGAGAGGAGACGGGAGGGCAGTTGCCATGTATCCTGCAAAAC
ACATGGCAACTGATGGCTTTTGGTGTGTGGGAGAGGAGACG-G-CATGTGGGTGACGGTGGTATCTTTAGGAGTTGCCAC
CTACTAACACTAGACAGTTGCTATGTAACGCTAC-AAAACAGACGTGACAACAATAACATGTT-CGGGTAAAAAAAGAGT
TGCCATATACTTACAATCACAAATAGGGCAGTTGCCATGTACCCTTCAAAAA-CATGGCAAA-TGACAATTTAGGTGTGG
GAGAGTGGGTGAATGACAGTCGTGGGAGATGGGGAACAGGAGTGGTGCGTGACGTGCGGGCGCGACAGCAGTTCCATCGC
ACGCCCCGACTGGCGAACGTTGGCCGCGGAGAGAAAACAGGCGTGTGGGCGAACTCCCCCACATACCACACACACGAGTA
GTCCTATGTGCCACATAAAATCAA-CCTTTTTATGCCAAGATTCGTGCAAAAAGCGTTGGACGGTGATGTAGGCGTGTGG
GCGAGTTGACTACCGTCCACACGTGTGGGCGTTAACATTT----------------------------------------
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>chr6A_1
CATGTCGGACAACTACAGTTATCATGATTTTGG-AAAACTTTAAGAGTTGCCACCTACTAACACTGGACAGTTGCCATGT
AGCACTAAA-AACATGGCAA-----AAAA-CATGTTGCGGGTAAAAAAGAGAGTTGCCATCTGCTTACAAGCACGCTAG-
GGTAGTTGCCATGTATCCTTCAAAACACATGGCAACTGATGGCTTTTGGTGTGTGGGAGAGGAGACGGG-----------
-------------------------------------------------------------AGGGCAGTTGCCATGTATC
CTGCAAAACACA--------------------------------------------------------------------
---TGGCAACTGATGGCTTTTGGTGTGTGGGAGAGGAGACG-GGCATGTGGGTGACGGTGGTATCTTTAGGAGTTGCCAC
CTACTAACACTAGACAGTTGCCATGTAACGCTAC-AAAAAGGACGTGGCAACAATAACATGTT-CGGATAAAAAGAGAGT
TATCATATGCTTACAATCACAAATAGGGCAGTTGCCATGTACCCTTCAAAAA-CATGGCAAA-TAACAGCTTAGGTGTGG
GAGAGTGGGTGAATGGCAGTCGTGGGAGATGGGGAACAGGAGTGGTGCATGGCGTGCGGGCGCGACAGCAGTTCCATCGC
ACGCCCCAACTGGCGAACGTTGGCCGCGGAGAGACAACAGGCGTGTGGGCGAACTCCCCCACATGCCACACACACGAGTG
GTCCTACATGGCACATAAAATCAA-CTTTTTTATGCCAAGATTCATGCAAAAGGCGTTGGACGGTGATATAAGCGTGTGG
GCGAGTTGGCTAACGCCCACACGTGTGGGTGTTAACATTTTCG-------------------------------------
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>chrUn_1
CATGTCGGACAACTACAATTATCATGATTTTGG-AAA-CTTTAAGAGTTGCCACCTACTAACACTGGACAGTTGCCATGT
AGCACTAAAAAACATGGCAA-----AAAA-CATGTTGCGGGTAAAAAAGAGAGTTGTCATCTGCTTACAAGCACGCTAG-
GGTAGTTGCCATGTATCCTGCAAAACACATGGCAACTGATAGCTTTTATTGTGTGGGAGAGGAGACGGG-----------
-------------------------------------------------------------AGGGCAGTTGCCATGTATC
CTGCAAAACACA--------------------------------------------------------------------
---TGGCAACTGATGGCTTTTGGTGTGTGGGAGAGGAGACG-GGCATGTGGGTGACGGTGGTATCTTTAGGAGTTGCCAC
CTACTAACACTAGACAGTTGCCATGTAACGCTAC-AAAACAGACGTGGCAACAATAACATGTT-CGGGTAAAAAAAGAGT
TGCCATATGCTTACAATCACAAATAGGGCAGTTGCCATGTACCCTTCAAAAAACATGGC-AAATGACAGCTTATGTGTGG
GAGAGTGGGTGAATGACAGTCGTGGGAGATGGGTAACAGGAGTGGTGCGTGGCGTGCGGGCGCGACAGCAGTTCCATCGC
ACGCCCCGACTGGCGAACGTTGGCCGTGGAGAGAAAACAGGCGTGTGGGCGAACTCCCCCACATGCCACACACACGAGTG
GTCCTACGTGACACATAAAATCAA-C-TTTTTATGCCAAGATTCGTGCAAAAGACGTTGGACAATGATGTAGGCGTGTGG
GCGAGTTGGTTAACGCCCACACGTGTGGACGTTAATATTTCCGT------------------------------------
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>chr3B_1
CATGTCGGACAACTACAGTTATCATGATTTGGA-AAA-CTTTAAGAGTTGCCACCTACTAACAATGGACAGTTGCCATGT
AGCACTAAAAAACATGGCAA-----AAAAACATGTTGCGGGT-AAAAAGAGAGTTGTTATCTGCTTACAAGCACGCTAG-
GGCGGTTGCCATGTATCATGCAAAACACATAGCAACTGATGGCTTTTGGTGTGTGGGATAGGAGACGGG-----------
-------------------------------------------------------------AGGGCAGTTGCCATGTATC
CTGCAAAACACA--------------------------------------------------------------------
---TGGCAACTGATGGCTTTTGGTGTGTGGGAGAGGAGACG-GGCATGTGGGTGACGGTGGTATCTTTAGGAGTTGCCAC
CTACTAACACTAGACGGTTGCCATGTAACGCTACAAAAACAGACGTGGCAACAATAACATGTT-CGGATAAAAAGAGAGT
TGTCATATGATTACAATCACAAATAGGGCAGTTGCCATGCACCCTTCAAAAA-CATGGCAAAATGACAGCTTGGGTGTGG
GAGAGTGGGAGAATGGCAATCGTGGGAGATGGGGAACAGGAGTGGTGCGTGGCGTGCGGGCGCGACATCAGTTCCATCGC
ACGCCCCGACTAGCGAACGTTGGCCGTGGAGAGAAAACAGGCGTGTGGGCGAACTCCCCCACATGCCACACACACGAGTG
GTCCTACGTAGCACACAAAATCAGCC-TTTTTATGTCAAGATTCGTGCAAAAGGCGCTGGACAGTGATGGAGGCGTGTGG
GCGAGTTGGCTAACGCCCACACGTGTGGGCGTTAACATTT----------------------------------------
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>chr3B_1
CATGTCGGACAACTACAGTTATCATGATTTGGA-AAA-CTTTAAGAGTTGCCACCTACTAACACTGGACAGTTGCCATGT
AGCACTAAAAAACATGGCAA-----AAAG-CATGTTGCGGGT-AAAAAGAGAGTTGACATCTGCTTATAAGCATGCT---
--------------------------------------------------------------------------------
-------------------------------------------------------------AGGGCAGTTGCCATGTATC
CTGCAAAACACA--------------------------------------------------------------------
---TGGCAACTGATGGCTTTTGGTGTGTGGGACAGGAGACG-GGCATGTGGGTGACGGTGGTATCTTTAGGAGTTGCCAC
CTACTAACACTAGACAGTTGCCATGTAATGCTAC-AAAACAGACGTGGCAACGATAACATGTT-CGGGTAACAAGAGAGT
TGCCATATGCTTACAATCACAAATAGGGCAGTTGCCATGTACCCTTCAAAAA-CATGGC-AAATGACAGCTTGGGTGTGG
GAGAGTGGGAGAATGACAGTCGTGGGAGATGGGGAACAGGAGTGGTGCGTGGCGTGCGGGCGCGACAGCAGTTCCATCGC
ACGCCCCGACTGGCGAACATTGGCTGCGGAGAGAAAACAGGCGTGTGGGCGAACTCCCCCACATGCCACACACACAAGTT
GTCCTACGTGGCACACAAAATCAGCC-TTTTTATGCCAAGATTCGTGCAAAAGACGCTGGACGGTGATGAAGGTGTGTGG
ACGAGTTGGCTAACGCCCACACGTGTGGGCGTTAACATTT----------------------------------------
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>chr3B_298
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-------------------------------------------------------------AGGGCAGTTGCCATGTATC
CTGCAAAACACA--------------------------------------------------------------------
---TGGCAACTGATGGCTTTTGGTGTGTGGGAGAGGAGACG-GGCATGTGGGTGACGGTGGTATCTTTAGGAGTTGCCAC
CTACTAACACTATACAGTTGCCATGTAACGCTAC-AAAACAGACGTGGCAACAATAACATGTT-CGGGTAAAAAGAGAGT
TGCCATATGCTTACAATCACAAATAGGGCAGTTGCCATGTACCCTTCAAAAA-CATGGCAAA-TGACAGCTTGGGTGTGG
GAGAGTGGGAGAATGACAGTCGTGGGAGATGGGGAACAGGAGTGGTGCGTGGCGTGCGGGCGCGATAGCAGTTCCATCGC
ACGCCCCGACTGGCGAACGTTGGCCGCGGAGAGAAAACAGGCGTGTGGGCGACCTCCCCCACATGCCACACACACGAGTT
GTCCTACGTGGCACACAAAATCAGCT-TTTTTATGCCAAGATTCGTGCAAAAGGCGCTGGATGGTGATGAAGGCGTGTGG
GCGAGTTGGCTAACGCCCACATGTGTGGGCGTTAACATTTTCGTTATTAATT----------------------------
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>chr3B_298
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-------------------------------------------------------------AGGGCAGTTGCCATGTATC
CTGCAAAACACA--------------------------------------------------------------------
---TGGCAACTGATGGCTTTTGGTGTGTGGGAGAGGAGACG-GGCATGTGGGTGACGGTGGTATCTTTAGGAGTTGCCAC
CTACTAACACTATACAGTTGCCATGTAACGCTAC-AAAACAGACGTGGCAACAATAACATGTT-CGGGTAAAAAGAGAGT
TGCCATATGCTTACAATCACAAATAGGGCAGTTGCCATGTACCCTTCAAAAA-CATGGCAAA-TGACAGCTTGGGTGTGG
GAGAGTGGGAGAATGGCAGTCGTGGGAGATGGGGAACAGGAGTGGTGCGTGGCGTGCGGGCGCGATAGCAGTTCCATCGC
ACGCCCCGACTGGCGAACGTTGGCCGCGGAGAGAAAACAGGCGTGTGGGCGACCTCCCCCACATGCCACACACACGAGTT
GTCCTACGTGGCACACAAAATCAGCT-TTTTTATGCCAAGATTCGTGCAAAAGGCGCTGGATGGTGATGAAGGCGTGTGG
GCGAGTTGGCTAACGCCCACATGTGTGGGCGTTAACATTTCCGTTATTAATT----------------------------
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>chr1B_838
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-------------------------------------------TTCTTAATTAGCTTTTTCACCAGTAAACTTTTCTCCC
ACC--TCGCTCTCTCATATAAA-CCCCCACTGCAGATACGAACAGACACACACCACCACAAGGCCAAGGCGGAGCAGCGA
GAGCTC--GCTTGCAGCAAGCAAAGCCATACTCCTTCCCTCGTCGTGCACCCACTGCACGCAGCCATGGCGCCTGCTCGG
GAGCTCCAAGAAACCTCGTCGTCTTCGTCGTCATCGACGTCGTCGTATACGACCAGTTCCACGTCCATGTCGTGCTCGTC
CACCGTCACGGACTCTTCGTCGTGTCCCTCCTCGCCGGCGAGCGCCGCCAATGCCGTGAAGGCGGTGCCGCGCAAGCGGC
AGCTGGACGAGGAAGAGGGAGGGCGGGAGGAGACGGAGGAGGGGAAGACGA------------AGACGACGAAGAAGA--
-GCAAGCGGAGCAGCGACGGGAAGCACCCGGTGTACCGCGGCGTGCGGATGCGGGCGTGGGGCAAGTGGGTGTCGGAGAT
CCGCGAGCCGCGCAAGAAGTCGCGCATCTGGCTCGGCACCTTCCCCACCGCCGAGATGGCCGCGCGCGCGCACGACGTCG
CCGCGCTCGCCATCAAGGGCGCCCGGTCCGCGCACCTCAACTTCCCGGAGCTCGCCGACGTCCTCCCGCGCGCCGCCTCG
CCGGCGCCCAAGGACGTGCAGGCCGCGGCCGCATTGGCCGCCGCGTTCACGTCTTCACCGCCGCCCTTGTCCACGGATCA
GTCGGAGGAGGAGGAGGGCCTCATCCAAGAGGAGACCGTCAAGAACGACGCCGGCGCAGACGCTACCACGCCGCCGGAGT
CTGCCGCCACGGCTACGAGCTGCGGCGC---CGCTGAGCAGGC---GGAGGAGGAGCT---GCAGCTGTTCGACCTGCCG
GACCTGCTCCTGGACATCGAGGACGGGTTCGGGTTCTCCACCATGTGGGCTCCGCTCCCCGACGTCGAGGAGGTCAATGC
GGACCTCCGGCTCGAGGAGCCACTCCTTTGGGAGTAGCAGATGCTTGCGAAGACTAGATGATCAAATATACTAGGAGTAC
TTAATCGCTAGTGTAATCTCTTCTTTGCCTTTTTTTCT-TTCCTTTTTTTACTACTAGTGTTTTTTTAGTTTGCC---TT
TTTTTTTACTTTGTTGGTTTATAATAAGCATAAGGGAGTACGTAGTGATATACATATGC-AAAAAAAGTTTGCTACTACC
---ACTACATGTTACCTGAGAGAGTTAATTAT---TACTATTACCACATAGTAATGTGTGAATCCTAGTGGTTTGACCTT
GATAGATTTTAGGCGA-----TGTACTGTAT------------TCGTTATGCTTGGAATACTCTTTGTACTGCATTGAGT
TTCCCCAGAAAAAAAAATA-TGTACATTTGAGTTCCATGCCATGGAGACTGAGATGAGAAGAAGGAATAGAATGCCAAGA
AGCTCGAAGTTAAGAGGTCACTAAAGCTGACTTTGAAAACTTAATCTATTCCAC------CCCTCACTTGTTTATCATCA
AGTGATGTTGCTCAACAAGAGGTGCTTTGCTACTGCCAGCAATTTCATGTTTCTTTATCAGCA-TCAGATCCTGTCGTAA
ACATCATGTTGAACTTTATTAGTTTGCTC----AGTGAAGTTGGGAGAAGAAG----CTCTTTTACTGTTCAACAGCAGA
GAAAAAAAAGGGTTAAAAATGTCAATTTGTGGATATGAGGTTGTTTGGCTAGTGTTGGTCTCCTCCATGATCAAGCAAGC
AGAGGCAGTGCAGTGCAGACAAAAGGCGGCACTCCTCATGTGGCTCCAGTGCAGCATCTCATCATC---------T---T
CTTCTTCTTCTTCCTCTGGCTTCCCCTGCTTTTTTTCTTCCTTTTGCCATCTGCTTTGGAAAGCTGCTGCTGATCAAGAT
GAGGGAATGAGATTCTTCTTCTGCT------TCTTTTCCTTGTGGTAGAGAGAGATGAGGGAGGTTATTTTAAGCATGGC
CATCATTTCCAGTGAGAAAGCTAATGCTCCCACTTACCAAGCAT
>chr1D_838
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-------------------------------------------TTCTTAATTAGCTTTTTCACCAGTAACCTTTTTTCCC
ACCTCTCTCTCTCTCATATAAACCCCCCACTGCAGATACGAACAGACACACACCACCGCAAGTCCAAGGCGGAGCGGCAA
GAGCTCACGCTTGCAGCGAAACCATACT--CTCCATCCCTCTTCGTGCGCCCACTGCACGCGGCCATGGCGCCCGCTCGG
GAGCTCCAAGAAACCTCGTCGTCCTCGTCGTCATCGACGTCGTCGTATACGACCAGCTCCACGTCCATGTCGTGCTCGTC
CACCGTCACGGACTCTTCGTCGTGCCCCTCCTCGCCGGCGAGCGCAGCCAATGCCGTGAAGGAGGCGCCGCGCAAGCGGC
AGCTGGACGAGGGAGAGGGAGGGCGTGAGGAGACGGAGGAGGGGAAGGCGA------------CGACGACGAAGAAGAAG
AGCAAGCGGAGCAGCGACGGGAAGCACCCGGTGTACCGCGGTGTGCGGATGCGGGCGTGGGGCAAGTGGGTGTCGGAGAT
CCGCGAGCCGCGCAAGAAGTCGCGCATCTGGCTCGGCACCTTCCCCACCGCCGAGATGGCCGCGCGCGCGCACGACGTCG
CCGCGCTCGCCATCAAGGGCGCCCGGTCCGCGCACCTCAACTTCCCGGAGCTCGCCGACGTCCTCCCGCGCGCCGCCTCG
CCGGCACCCAAGGACGTGCAGGCCGCCGCCGCATTGGCCGCCGCGTTCACGTCTTCGCCGCCGCCCATGTCCACGGATCA
GTCGGAGGAGGAGGAGGGCCTCATCCAAGAGGAGACCGTCAAGAACGACGCCGGCGCGGACGCTACCGCGCCGCCGGAGT
CTGCCGCCACGGCTACGAGCTGCGGCGCCGCCGCTGAGCAGGCGGAGGAGGAGGAGCT---GCAGCTGTTCGACCTGCCG
GACCTGCTCCTGGACATCGAGGACGGGTTCGGGTTCTCCACCATGTGGGCTCCGCTCCCCGACGTCGAGGAGGTCAATGC
AGACCTCCGGCTCGAGGAGCCACTCCTTTGGGAGTAGTAGATGCTTGCGAAGACTAGATGATCAAATATACTAGGAGTAC
TTAATTGCTAGTGTAATCTCTTCTTTGCCTTTTTTTCTTTTCCTTCTTTTACTACTAGTGTTTTTTTTAGTTTGCCTTTT
TTTTTTTACTTTGTTGGTTTA--ATAAGCACAAGGGAGTACGTAGTGATATACATATGCAAAAAAAAGTTTGCTACTACC
---ACTACATGTTACCTGAGAGAGTTAATTAT---TACTATTACCACATAGTAATGTGTGGATCCTAGTGGTTTGACCTT
GATAGATTTTAGGCGA-----TGTACTCTTTGTAATGTGTGGATCGTTATGCTTGGAATACTCTTTGTACTGCATTGAGT
TTCCCCAG-AAAAATAATA-TATACATTTGAGTGTGATGCCATGGAGACTGAGATGAGAAGAAGGAATAGAATGCCGAGA
AGCTCGAAGTTAAGAGGCCACTGAAGCTGACTTTGGAAACTTGATCTATTCCAC------CCCTCACTTGTTTATCATCA
AGCGATGTTGCTCAACAAGAGGTGCTTTGCTACTGCCAGCGATTTCATGTTTCTTTATCAGCATTCAGATCCTGTCGTAA
ACACCATGTTGAACTTTATTAGTTAGTTTGCCAAGTGAAGTTGGGAGAAGAAG----CTCTTTTACTGTTCAACAGC--A
GAAAAAAAAGGGGTTAAAATGTCAATTTGTGGATATGAGATTGTTTGGCTAGTGTTGGTCTCCTCCATGATCAAGCAAGC
AAGCAGAG-GCAGTGCAGACAAAAGGTGGCACTCCTCATGTGGCTCCAGTGCAGCATCTCATCATC---------TTCAT
CTTCTTCTTCTTCCTCTGGCTTCCCCTGCTTTTTTCTC-CCTTTTGCCATCTGCTTTGGAAAGCTGCTGCTGATCAAGAT
GAGGGAATGAGATTCTTCTTCTGCTGCTGCTTCTTTTCCTTGTGGTAGAGAGAGATGAGGGAGGTTATTTTAAGCGTGGC
CATCATTTCCAGTGAGAAAGCTAATGCTCCCACTTACCAAGCAT
>SNPs
-----------------------------------------------------------------S--------S-----
---SS-SS------SSSSSSSSSSS--S--------------------------------S-------------------
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---------------------S--------------------------S-------------------------------
--------------------------------------------------------------------------------
----------------S---------------------------------------------------------------
-----------S---------------S-S---S-------SSSSS--------S--------S----------------
------S-------------------------------------------------------------------------
------------------------S-----------S---------------------------------------S---
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--------------S-----------------------------------------------------------------
-----S--------------------------------------------------------------------------
-SSSSSS-S-----------------------------------------------------S-----------------
--------------------------------------------------------------------------------
---------------S----------------------------------------------------------------
------------------------S--------------------------SSSSSSSSSSSS-----------------
--------S-----------------------------------------------------------------------
---------S----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------SS---S----------------------------------------------S---S----------------
---------------------------S------------------------------SSS-------------------
---------S-S--------------S-----S-----------------------------------------------
---------------------S----------------------------------------------------------
--------------------------------S---S----S----------------S---------------------
--S----------S------------------------------------------------------------------
SSS-----------------------------SSS---------------------------------------------
-SS-SSSSS-SSSS-SSSSSS------------------------------------------S----------------
S--------------S-S-S----S----------------------------------------------------S--
------------------------------------------------------SSSSSS-----------------S--
------------------------------S-------------------------------------------------
--------S--------------------------------------------SSSS----------S-----S-S---S
SS--------------------SS--------------------S------------------S----------------
------S-----------------------------------------------------------SSSSSSSSS-----
-------------------------------------------------------------------------------S
---S-----------------------------------------S---------S---S--------------------
--------------S-----------------------------
>forward_101
--------------------------------------------------------------------------------
-ACGTTGCAAAACAGACGTGG-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>reverse_1342
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------GACGACGACGAAGAAGAGC
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>forward_103
--------------------------------------------------------------------------------
---GTTGCAAAACAGACGTGGCA---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>reverse_1343
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------ACGACGACGAAGAAGAGC
AA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>forward_510
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------TGGACAGTTGCCATGTAGCA--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>reverse_1852
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------CGACATCGAGGACGGATTCG-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>forward_1688
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------TCCACGGATCA
GTCGGAGT------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>reverse_2727
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------GGTGCAGACAAAAGGTGGC-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
