>input_sequence_67136
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-----ATGGGCTCCAAGATGCTTCTGGTCACCGCTCTCTTGGTGGGCATAGCCTCTCAGAGCTATGCCACCAGGAGCCTT
GACGGAAACCACTTGGCTGATCAGAAGTGTATGTATTAGTTCCAGATCTCACAGTCCCGTGTGTTTACCTTGTTGCATAT
ATAATACTGCTGCCACGTACTTTTGCTGATCATGAGGCACGCCGTGTATCTGTCGATCTCAACAGACGGCGGCGGCGGCT
ACGGAGGTGGCGGTGGGGGCTCCGGAGGTGGTGGTGGCTACGGAGGAGGTGGCAGCGGCGGCGGGGGTGGCTATGGAGGA
GGCGGCGGCGG---TGGCTACGGAGGAGGAGGCGGCGGTTACACACCGATGCCAACACCGTCGACCCCCAGCCACAGCGG
ATCCTGCGAGTAAGGCAAACCTGCCGCTAGATAATAATCTGCTAAA-----TATCAATCAAAGGATCGCAGATTCAAAGC
TCAAAAAACAATCTGTTCTAAC---------TGTAACTCTGCATCTGGACGTGTGTGCGCAGCTACTGGAAGGGCCACCC
GGAGAAGATCATCGACTGCATCGGCAGCCTGGGCAGCATCCTGGGCTCCCTCGGAGAGGTGTGCCACTCCTTCTTCGGCA
GCAAGATCCATACCCTGCAGGACGCGCTGTGCAACACCCGGACCGACTGCTACGGCGACCTGCTGCGCGAGGGCGCCGCC
GCCTACATCAACGCCATCGCCGCCAAGAAGGAGAAGTTCGCCTACACCGCCTACCAGGTCAAGGAGTGCGTCGCCGTCGG
GCTCACCTCCGAGTTCGCCGCCGCCGCGCAGGCCGCCATGTTGAAGAAGGCCAACTACGCCTGCCACTACTAG-------
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>chr7D_1_TraesCS7D01G367600
TACAACTTGGCATTATGAAAGCATAATTGCGCAAAGAGCTTTCATTATTAAGATTACTGGCAGCTGCAGTGATCAAATCG
AACTAA-GTAGGCCGAAGATGAATCTTTTCACTGCAATCTGCAACAAACAGAAAACACGAGAGAAATTGATTCACTGCAT
AACAAGTCAGGTGAC----ACATATATAGTAAAATCAA--TCCATATTTTTGTTGTTATTAATTTTGTAGATCATGCAAT
CCATCTTAATTTCTGACTTATATTTCTAATATATCCGCTGGAGGACCATCCAACTTGGACCTGAAGGACAGCACATATAT
GATCTGAATGTCCACGTCCACGTACTGCGACGTCGCAACTTCCTAAGGACCAAAACATT-AAGGGCGCACTCCATGAAAT
AGCGGGAGAGTAGGTGGCAAGCGCCGAATCCAATTTAATCTGGTTGGAACGACACCCGTTTAGTGATGATAGTGGCATGT
CATCCTTTCTCACACGAAAGCTACGACCGATCTGCAGAC-TAACCTGCACCGAACAGTCGATGCACACCGCCTCTTCGGC
-AAGTCCATCTCCAACTGGCAACTAGAGTATCAATCCCTCAAAAAAAAAAAAGAACTAGCAGCTATCATACT--------
-----TGAGTTCCAATTAC-TTACGCATTTCTCCAGCCTCAAACCGTATAACGATATGCTAGCTATAGCTAGTATAAGAA
A---GTTTAAGCACACAATTAATCCA---TGGATTCAACACGTGCACTAGCCGTGAGGCCAGGCTAAGAGATCGCCATGG
CA----CTGAGCTGGATGGATGAACCGA----GGCATTGATGGCGGGTGGTGG-CTAACTACCCTCGACCCGTGGCTAGG
TCACACGGTCCATGCATGCTCACCGGCAAATCAACGGTAGGTGATGCGCGCTTGTGTATTTATACCTGCAGGTTC-AGTG
TCCAAAGGCACCCACT-----CAAGTACCACTGACACTGCCACAGTCCTCTTTGTCTCTACCACTTCGAGGAGTTCTTCG
GAAGGATGGGCTCCAAGATGCTTCTGGTCACCGCTCTCTTGGTGGGCATAGCCTCTCAGAGCTATGCCACCAGGAGCCTT
GACGGAAACCACTTGGCTGATCAGAAGTGTATGTATTAGTTCCAGATCTCACAGTCCCGTGTGTTTACCTTGTTGCATAT
ATAATACTGCTGCCACGTACTTTTGCTGATCATGAGGCACGCCGTGTATCTGTCGATCTCAACAGACGGCGGCGGCGGCT
ACGGAGGTGGCGGTGGGGGCTCCGGAGGTGGTGGTGGCTACGGAGGAGGTGGCAGCGGCGGCGGGGGTGGCTATGGAGGA
GGCGGCGGCGG---TGGCTACGGAGGAGGAGGCGGCGGTTACACACCGATGCCAACACCGTCGACCCCCAGCCACAGCGG
ATCCTGCGAGTAAGGCAAACCTGCCGCTAGATAATAATCTGCTAAA-----TATCAATCAAAGGATCGCAGATTCAAAGC
TCAAAAAACAATCTGTTCTAAC---------TGTAACTCTGCATCTGGACGTGTGTGCGCAGCTACTGGAAGGGCCACCC
GGAGAAGATCATCGACTGCATCGGCAGCCTGGGCAGCATCCTGGGCTCCCTCGGAGAGGTGTGCCACTCCTTCTTCGGCA
GCAAGATCCATACCCTGCAGGACGCGCTGTGCAACACCCGGACCGACTGCTACGGCGACCTGCTGCGCGAGGGCGCCGCC
GCCTACATCAACGCCATCGCCGCCAAGAAGGAGAAGTTCGCCTACACCGCCTACCAGGTCAAGGAGTGCGTCGCCGTCGG
GCTCACCTCCGAGTTCGCCGCCGCCGCGCAGGCCGCCATGTTGAAGAAGGCCAACTACGCCTGCCACTACTAGGAGGCTA
GGCTACCGGCCGGCCGCCCCAGCTGGTGGTCGTC-----GGTGGCTAAATAAGTCCATATATGCATGCACGTGTCGTGCA
TGT-------TTTCATGCAGTTTCCCGGATGCGCGCGCGCGTGTCCTCCGCTATGCCTTTATGTGTTTGCTTGCCGTTTG
ATGATGCATGCCATGCCGTCTCATATATACGTAGTGATGCTTAATGCTTTGCTTGCTTTTCTTATCTTCGTTGGTGATGT
AAGAATAATTTGATTGA-GGAGTTATTAGTGAAAGACATAGTATGCATGATCGCTACCTTTGTTCAGTCTTTGTTTTTTT
TTCTTGCGGGGATCTTTGTTCAGTACTTCAGTTATAAAAGACACGAAAAGATCTTATTGACTAGGAAGTGTCCAAGTAAG
ACTATGTACCCATGCATCACAAGATCATTTGATCTTGGGTTGGGTGGCGCTATCGTTGTGTCATTGCGCATCAACCTAGG
CCAATATTCCACCTTTCCTGGTATTCCATCCGTAAAGAAATAAGAGATCATTTAGATCACTATATTAGTGATCTAAACGA
TCAAGGGAGTACCTTTTAGTTAAAACATCTTTATTATGTTGAGTTTAATATTTTCATTCTACTAGACTAGATCGCTTGGG
GATGGGAACTTGGTGCTCTCGGGTACCCTCGCACCCTATGTGCGCCAAAAAAATTAGTAATTCAAAAAAATAGAATCTTT
TTTAAAGCAAACATGATCAGGTATTGTGCTCCTATTAAATGTTTGGACAAGAAATTATTCCTTATTGACTTCGGGGTAAA
AATGACAAATTTATGACAACAATATAGTGTGTACAGTACTTGTATATAGCTTTTTTTTTAATCTTTGAGCTAGGATGCAA
TGAAAGTCATTCTCTGACAAAAGTTTTTATACGAGTACAATACATGATCATGTTTGATTCCAAAAAAAATTGAATTTTTT
TGAATTTTTGAATTACTATGTTTTTTGCATATATATGGTGCGCTGG
>chr7B_1
TACAACTTGGCATTATGAAAGCATAATTGCGCAAAGAGCTTTCATTATTAAGATTACTGGCAGCTGCAGTGATCAAATCG
AACT-AAGTAGGTCAAAGATGAATCTTTCCACTGCAATCTGCAACAAGCAGAAAACACGAGAGAAATTGATTCACCGCAT
AACAAGTCAGATGACACCGACATATATAGTAAAATCATACTCCA---------------TATTTTTGTTGATCATGCAAT
CCATCTTAATTTCTGACTTATATTTCTAATATATCCGCTGGAGGACCATCCAACTTGGATCTGAAGGACAGCACATATAT
GATCTGAATGTCCACGTCCACGTACTGCGACGTCGCAACTTCCTAAGGACCAAAACATT-AAGGGCACACTCCATGAAAT
AGCGGGAGAGTAGGTGGCAAGCGCCGAATCCAATTTAATCCGGTTGGAACGACACCCGTTTAGTGATGATAGTGGCATGT
CATCTTTTCTCACACGAAAGCTACGACCGATCTGCAGACGTAACCTGCACCGAACGGTCGATGCACACCGCCTCTTCGGC
-AAGTCCATCTCCAACTGGCAACTAGAGTATCAATCCCTCA--AAAAAAAAAAAACTAGCAGCTATCATACT--------
-----TGAGTTCCAATTACTTTACGCATTTCTCCAGCCTCAAACCGTATAACGATATGCTAGCTATAGCTAGTATAAGAA
A---GTTTAAGTACACAATTAATCCATT---GATTCAACACGTGCACTAGCCGTGAGGCCAGGCTAAGAGATCACCATGC
ATGGCCCTGAGCTGGATGGATGAACCGA----GGCATTGATGGCGGGTGGT-G-CTAACTACCCTCGACCCGTGGCTAGG
TCACACGGTCCATGCATGCTCACCGGCAAATCAACGGTAGGTGATGCGCGCTTGTGTATTTATACCTGCAGGGTCAAGTG
TCCAAAGGCACCCACT-----CAAGTGCAACTGCCACTGCCACAATCCTCTTTGTCTCTACCACTTTGAGGAGTTCTTCG
GAACGATGGGCTCCAAGATGCTTCTGGTCACCGCTCTCTTGGTGGGCATAGCCTCTCAGAGCTATGCCACCAGGAGCCTT
GACGGAAACCACTTGGCTGATCAGAAGTGTATGCATTAGTTCTAGATCTCACACTCCCGTGCTTC-ACCTTGTTGCATAT
ATAATACTA---CCACGTACTTTTGCTGATCACGAGGCACGCTGTGTATCTGTCGATCTCAACAGACGGCGGTGGCGGCT
ACGGAGGTGGCGGTGGGGGCTCCGGAGGTGGTGGTGGCTACGGAGGAGGTGGCAGCGGCGGCGGAGGTGGCTATGGAGGA
GGAGGCGGCGGCGGCGGCTACGGAGGAGGAGGCGGCGGTTACACACCGACACCAACACCGTCGACGCCCAGCCACAGCGG
ATCCTGCGAGTAAGCCAAACGTGCCGCTAGATAATAATCTGCTAAAC------TCAATCAACAGATCACAGATTCAAGGC
TCAAAAACACAAACCGTTGTAAGTCTAAGTGTGTAACCCTGCATCTGCGCGTGTGTGCGCAGCTACTGGAAGGGCCACCC
GGAGAAGATCATCGACTGCATCGGCAACCTGGGCAGCATTCTGGGCTCCCTCGGCGAGGTGTGCCACGCCTTCTTCGGCA
GCAAGATCCATACCCTGCAGGACGCGCTGTGCAACACCCGGACCGACTGCTACGGTGACCTGCTGCGCGAGGGCGCCGCC
GCCTACATCAACGCCATCGCCGCCAAGAAGGAGAAGTTCGCCTACACCGCCTACCAGGTCAAGGAGTGCGTCGCCGTCGG
GCTCACCTCCGAGTTCGCCGCCGCAGCGCAGGCCGCCATGTTGAAGAAGGCCAACTACGCATGTCACTACTAGGCTAGGC
T-----------GCCGCCCCAGCTGGTAGTCGTC-----GGTGGCTAAATAAGTCCATATATGCATGCACGTGTCGTGCA
TGT-------TTTCATGCAGTT-CCCGGATGCGCGCGAGCGTGTCCTCCGCTAAGCCTTTATGTGTTTGTTTGCCTTTTG
ATGATGCATGCCATGCCGTCTCG--TATACGTAGTGATGCTTAATGCTTTGCTTGCTTTTCTTATCGTCGTTGGTGATGT
AAGAATAATTTGATTTGGGGAGTTATTAGTGAAAGATA---TATGCATGATCGTTATCTTTGTTCAGT------------
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>chr7A_1
TACAACGTGGCATCATGAGAACATAATTGCGCAAAGAGATTTCATTCTTAAGATCACTGGCAGCTGCAGTGATCGCATCG
AACTAAAGTAGGTCAAAGATGAATCTCTTCACTGCAATCTGCAACAAGCAGAAAACACGAGAGAAA--------CTGCAT
AACAAATCAGGTGGCCCGAC-----ATAGTAAAATCATACTCCATATTTTTGTTGTTA---ATCTTGTTGATCATGCAAT
CCATCTTAATTTCTGACTTGTATTTCTAATATATCCGCTGGAGGACCAGCCAACTTGGACCTAAAGGACAGCACATGTAT
GATCTGAATGTCCACGTCCACGTACTGCGACGTCGCAACTTCCTAAGGACCAAAACATTAAAGGGCACACTCCATGCAAT
AGCGGGAGAGTAGGTGGCAAGCGCCGAATCCAATTTAATCCGGTTGGAACGACACCCGTTTAGTGATGATAGCGGCATGT
CATCCTTTCTCACACGAAAGCTACGACCGATCTGCAGACGTAACCTGCACCGAACGGTCGATGCACACGGCTTCTTCGGC
CAACTCCAGCTCCATCTAGGC--------------------------------AACTATCGGCTATCATAGGTATCTAAT
TAACCTGAGTTCCAATTAC-TTGTGCATTTCTCCAGCCTCAAACAGTATAACGATATGCTAGCTATAGCTAGTATAAGAA
ATAAGGTCAAGCACACAATCCATGGATTTTGGATCCAACACGTGCACTAGCCGTGAGGCCAGGCTAAGAGATGGCCATGA
TC----TTGAGCTGGATGGATGAACCGATCGAGGCATTGATGGCGGGGGGT-GGCTAACTACCGGA-ACCCGTGGCTAGG
TCACACGGTCCATGCATGCACACCGGCAAATCAACGGTAGGTGATGCGCGCTTGTGTATTTATACCTGCATGCTC-GGTG
TCCAAAGGCACCCACTGCACTCAAGTACTACAGCCACTGCCACAATCCTCTTTGTCTGTCTTTCTTTCAGGAGTTCTTCG
GAA-GATGGGCTCCAAGATGCTTCTGGTCACCGTTCTCTTGGTGGGCATAGCCTCTCAGAGCTATGCCACCAGGAGCCTT
GAGGGGAACCACTTGGCTGAGCAGAAGTGTATGTATTAGTCCCAGATCTCACAGTCCCGTGT--TTGCCTTGTTGTATAT
ATGGTGCTACT---ACGTACTTTTGCTGATCACGAGGCACGCTGTGTATCTGTGGATCTCAACAGACGGCGGCGGCGGCT
ACGGAGGTGGCGGTGGGGGCTCGGGAGGTGGTGGCGGCTATGGAGGAGGTGGCAGCGGCGGCGGGGGTGGCTATGGAGGA
GGCGGCGGCGGCGGTGGCTACGGAGGAGGAGGCGGCGGTTACACACCGACGCCAACACCGTCGACCCCCAGCCACAGCGG
ATCCTGCGAGTAAGGCAAACGTACCGCTAGATAATAATCTGCTAAATACTGTATCAATCAAAGGATCGCAGATTCAAAGC
TCAAAAACCCACT--GTTGTAAGTGTAACTGTGCA--TCTGCATGTGTAC--GTGTGCGCAGCTACTGGAAGGGCCACCC
GGAGAAGATCATCGACTGCATCGGCAGCCTGGGCAGCATCCTGGGCTCCCTCGGCGAGGTGTGCCACGCCTTCTTCGGCA
GCAAGATCCACACCCTGCAGGACGCGCTGTGCAACACCCGGACCGACTGCTACGGCGACCTGCTGCGCGAGGGCGCCGCC
GCCTACATCAACGCCATCGCCGCCAAGAAGGAGAAGTTCGCCTACACCGCCTACCAGGTCAAGGAGTGCGTCGCCGTCGG
GCTCACCTCCGAGTTCGCCGCCGCCGCGCAGGCCGCCATGTTGAAGAAGGCCAACTACGCCTGCCACTACTAGGCTAGGC
T-----------GCCGCCCCAGCTGCTAGTCGTCTCGTCGGTGGCTAAATAAGTCCATATATGCATGCACGTGTTGTGCA
TGTGTTTTCATTTCATGCAGTT-CCCGGATGCGCGCGCGCGTGTCCTCCGCTAAG-CTTTATGTGTTTGTTTGCCGTTTG
ATGATGCATGCCATGCCGTCTCG--TCTACGTAGTGATGCTTTGC------------TTGCTTTTCGTCGTTGGTGATGT
AAAAATAATTTGATTATTAGTGAAA-----GAAAGATATAGCATGCATGATCGTTACCATTGTTCAGT------------
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>SNPs
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------------S-S--------------------------------S--------------------------------
-------------------------------------S--------------------S---------S-----------
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------------------------------------------------------------------S-------------
----------------------------------------S---------------------------------------
-------------------------------------------------------S------------------------
-----------------------------------------SS---------S---------------------------
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-------------------------------------------------------------------------------S
SS-------------------------------------------------S----------------------------
------------------------------------------------------------------------S-------
----------------------------S----S----------S---------------------S-------------
---S----------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
--------S--S--------------------S---------S-------------------------------------
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-------------------------------------------------S------------------------------
--------------------S-----------------------------------------------------------
-------S-S-SSSSS-SSS-S-------------------------S--------------------------------
------------------------------------------------------S------------S------------
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--------------------------------------------------------------------------SSSSSS
SSSSSSSSSSSS---------------S----------------------------------------------------
----------------------S------------------------------S---------------S----------
----------------------SSS-----------------------------------------S-------------
---------------SS-------------------S----------------S--------------SSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_802
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--------------------------------------------------------------GCTAAGAGATCGCCATGG
CA------------------------------------------------------------------------------
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>reverse_2382
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-------------------------------------------------------------CATTGCGCATCAACCTAGG
C-------------------------------------------------------------------------------
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