>input_sequence_67114
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-------------------------------------------ATGCGCTCCGACGAGCACACGTTCGGCA---------
------------------------------------CCGACGGCGTGGAGCTGCAGTTCTTTCACGGGCACGACGTCGAC
GAGGACGAGGACGGCAGCACCATGTTCGCGGACGAGGAAGCCTCGGCAGAGTCATCATCGGCGACGGCTCTGGACGCGGC
GAAGCGGGCGGCGGTGGGAGTGGGCGCGCGGGTGCTCTTCTACCCGAAGATGGCCTACAAGCTGGTGGCCGGCCGGCCTG
CTCGGGGTAAAGCCTCGGAGGAGCCGTCGTCATCGTC---------GGCGACGACTCTAGACGCGGCGAAGCACGCGGCG
GTGGGCATGGGCGCGCGGGCGCTCTTCTACCCGACGCTCGCCTACAGCCTGGCCCGGTACCGCCTCTCAT---CCGAATT
CCACTGGTGGAACCTCATCGAAGGCACCCACATCTACCTCGGCGCCGTCCCGTTCCCGAGCGACGTGCCGCGCCTGCACG
ACCTGGGCGTCCGCGACGTGGTGACCCTCACCGAGCCCTACGAGCGGCTGGTGCCCAAGTCGCTGTACATTAAACACAAG
ATGGAGAACCTGGTGCTGCCAACCACTGACTACCTCTACGCGCCGTCCAAGGACGACCTCTGCCGTGCCGCGGCGTTCAT
CCACAGCAGCGGGGAGCGAGGGAGAAAGACGTACGTGCACTGCAAGGCCGGGCGCGCGCGCAGCGCCACGGTGGTTATGT
GCTACCTGGTGCGGTACAAGGGGATGACGGCGAAGGAGGCGTACGATCACGTGCGGTGGTGCCGGCCCAGGGTGTCGCTG
GCTCCGGCGCAGTGGCAGGCGGTCCAGGACTTCGAGGACTTCTACCGGCGGCCGGCCGGTGGCTCGGAGTGA--------
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>chr5A_1_TraesCS5A01G488300
ATCCACCGAAGACTAGCATCGACCAAATCCCGCAAGATCCGATGAAGACAAACCTACACACGTCCTCCGATGATGCTAGA
CACACCATCAGGACGGCGATGGAATGTGTGAGACATTATTCCTATTAAGGGACATTGTCGCCGTCACACGGCCTCAATCA
AAACGCTGACTCTAACAAGAACGAGAACGAGGTCCCTCCCACGGGCGGGGGCCGAGATCCTCCGCACCTCCATGGCCTAG
AGGCCATCGGAGATGGGACGGATCGGCAACGGCGTCGACGGAAGGAGAAGAGAGCTTTTCTTGTGGACGAGTTGGAATAA
AGCTTATTACCGTTCATCATAAAAATGAAACTGTTTGAAGGTTGTGATATTGATTAATCAAGAAACACAAATAGATCCCG
TGATGCTAGCCTTGTGCATGAGATCAAGGCCCTGGTTTGGGGGGAGTGGACGTAGGTAGTGAATGCGATCAGGCGTACGA
AAAATTGTGTTAGTCACGAACTAGTTAGGATTGGCCACGTTATGTTAAGACTACAGTCTTGTTGAGTTCTGGCCAGATTG
GGTTGTAAAGCTTTGTAAACCGGATCACGCTGATCCAGGTTAAGTTTATGGAAAATTCCATCCCCTGTGAAGGACATGTG
GTGACTTTGTCAATGTTAAAATATTGTGACAGCTCAATTTTTTGAAGATGTTCATAGAGATAGGATGTGCGTGTGTGTCG
TATGGATGAGTGTATGTGTGTGGCGAACTGTATCAAAAAAAGAAAC--TTGCCATGGTTTACACGTTGGGACAGATCTCT
TGATACAAGTCCATTACGGATACGACAGAGGAGATGAAGTACAGGAGCAGGTCTCGGAGATTAAACGGGATACAAGCTAG
TGCTTGCCTTATATTGTCTAACAATTAGATCCCGTCGAGCAGATTTTCCGAGGGTTCC-GATCGACCGCAGCGGATTGCA
TCGAGACATCGACTTCGACGAACACACTTCCTCGCGACCAGAGATGCGCTCCGACGAGCACACGTTCGGCA---------
------------------------------------CCGACGGCGTGGAGCTGCAGTTCTTTCACGGGCACGACGTCGAC
GAGGACGAGGACGGCAGCACCATGTTCGCGGACGAGGAAGCCTCGGCAGAGTCATCATCGGCGACGGCTCTGGACGCGGC
GAAGCGGGCGGCGGTGGGAGTGGGCGCGCGGGTGCTCTTCTACCCGAAGATGGCCTACAAGCTGGTGGCCGGCCGGCCTG
CTCGGGGTAAAGCCTCGGAGGAGCCGTCGTCATCGTC---------GGCGACGACTCTAGACGCGGCGAAGCACGCGGCG
GTGGGCATGGGCGCGCGGGCGCTCTTCTACCCGACGCTCGCCTACAGCCTGGCCCGGTACCGCCTCTCAT---CCGAATT
CCACTGGTGGAACCTCATCGAAGGCACCCACATCTACCTCGGCGCCGTCCCGTTCCCGAGCGACGTGCCGCGCCTGCACG
ACCTGGGCGTCCGCGACGTGGTGACCCTCACCGAGCCCTACGAGCGGCTGGTGCCCAAGTCGCTGTACATTAAACACAAG
ATGGAGAACCTGGTGCTGCCAACCACTGACTACCTCTACGCGCCGTCCAAGGACGACCTCTGCCGTGCCGCGGCGTTCAT
CCACAGCAGCGGGGAGCGAGGGAGAAAGACGTACGTGCACTGCAAGGCCGGGCGCGCGCGCAGCGCCACGGTGGTTATGT
GCTACCTGGTGCGGTACAAGGGGATGACGGCGAAGGAGGCGTACGATCACGTGCGGTGGTGCCGGCCCAGGGTGTCGCTG
GCTCCGGCGCAGTGGCAGGCGGTCCAGGACTTCGAGGACTTCTACCGGCGGCCGGCCGGTGGCTCGGAGTGAAGCCAACC
GCTCCAACTCTGCGGATGGATCATCCGAGCGCGACGCTAGGTTTTGTGTATATATATAGCTTTGTAGCCGGGTACTGGAC
GTACGTGAGTATCAATGTTCGAACACTGTTCCGTTAATTCTAATAAGTACTCCCTCTGTTTTTAAATATTTGTCTTTCTA
GAGATTTCAACAAGTGACTACATATAGAGCAAAATAAGTGAATCTACACTCTAAAATATGTCTATATACATCCATATATG
GTAGTTTATTTGAATCTCTAAAAAGACAAATATTTATGAATGGAGAGAGTATATAAAACTAAGGTAATGTTTGTATCTGG
TCGACCGGCCGAAACTGCGCCGGTCGCGTCCTGTCCACACGTCCTATTGATCCCACGCACCGCCCTCTTTCCTTTTCCCC
TTATCCCC-TCCTCTTCCCCAAACGTTCTCGACCATTCGTTCGT------------------------------------
-----------CCCCGCTAGAGCGCCTCCACACATACGTCGTCGCGCGCAGCTGTTGGTGCCCAGCGCGACCATACCCTC
ATGCGCTCGGCTGTTATCGTCTTTGCGATGGGGCGGCCATCATGTGCTGCGTGCGGCTCCTGCACTTGCTAGGACTGCAA
GTACCGCAAAGCTGTGATCAGTGGCAGAGGCAGGATTCGAGTATAGGGGGGCCGAGTACGTATATTGATCTAATCTCATT
GGTAATTACTCGTGGGTCCTACTAAAATTGTCGATCATTGGGGGGGCCAGGCCCTTGCTCGTCCCCCCTGGCTCCGCCCC
TGGCTGTGATGAGGCCGGCCATGGTGTGAGCTCGCACACGAAGCTACAACCATGGGGCGGCTGGCTGAATGCATCCAAGA
GGATTTTTGCTACCACGGGGAAGTCTGCTACAACCAGCGGCAGCACACAGCAAAGCTGCATCCACGGGGCAAAGATGCTA
-CGACCGGCGCGCCAAAATGCTTCGTCTGGCGTATCTTTTTGCTGGAACCAGCTCAGCGTCGGCTGCGAGAGTCGACGCG
A
>chr5B_746
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-------------------------AACTGTTTCATAAAAAAAAAACTTTGCCATGGTTTACACGTTGGGACAGATCGCT
TTGATACAGTCCATTACAGATACGAAGACGTG---------CAGGAGCAGGTCTCGGAGATTAAACGGGATACAAGTTAC
G---TGCCTTATATT------------GATCCCGTGGAGCAGATTTTCCGAGGGTTCC-GATCGACCGCAGCGGATTGCA
TCGAGACATCGACTTCGACGAACAC--TTCGTCACGATCAGAGATGCGCTCCGACGAGCACACGTTCGGCCCCGCCGGAG
TGGGGCTGCAGCACCTTCACGGGCACGTCGATAACCCCGACGGAGTGGAGCTGCAGCTCCTTCGCGGGCACTTCTTCTTG
GACGACGACGACGGCAGCGCTAGGTTCGCGGACGAGAAAGCCTCGGCAGAGTCATTGTCGGCGACGGCTCTGGACGCGGC
GAAGCGGGCGGCGGTGGGAGTGGGCGCGCGGGTGCTCTTCTACCCGAAGCTGGCCTACAAGCTGGTGGCCGGCCGGCCGG
CTCGGGGCAAAGCCTCGGAGGAGTCGTCGTCATCGTCATCGTCATTGGCGACGACTCTAGACGCGGCCAAGCACGCGGCG
GTGGGCGTGGGCGCGCGGGCGCTCTTCTACCCGACGCTCGCCTACAGCCTGGCCCGGGACCGCCTCTCGT---CCGACTT
CCACTGGTGGGACCGCATCGACGGCACCAACATCCTGCTCGGCGCCGTCCCGTTCCCGAGCGACGTGCCGGCCCTCCACG
CCGACGGCGTCCGCGCCGTCGTCACGCTCACCGAGCCCTACGAGCGGCTCGTGCCCAAGTCACTGTACGTTAAACACAAG
ATCGAGAACCTGGTGCTGCCAACCACGGACTACCTCTACGCGCCGTCGCAGAAGGACCTCCGCGAAGCCACGGCGTTCAT
CCGCGGCGTCGCGGAGAAAGGGGAATCGGCGTACGTGCACTGCAAGGCCGGGCGCGCGCGCAGCGCCACGGTGGTGATGT
GCTACCTGGTGAGGTACAAGGGGATGACGGCGGAGGAGGCGAAAGCACACGTGGAGAGGTGCCGGCCCAGGGTGTCGCTG
GCTCCGGCGCAGTGGCAGGCGGTCCAGGACTTCGAGGACTTCTGCCGGCGGCCGGCCGGTGGCTCGGAGTGAAGCCAACT
GCTCCAACTCTGCGGATGGATCACGCGAGCACGACGCTAGCTAGGTTTTGTGTATATAGCTTCCACAGGTGCTGG-----
--ACGTGAGCATCAATGTTCGAACACTGTTCCGTTATTCCTAATAAAGTA------------------------------
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>chr5D_755
AA------------------------------------------------------------------------------
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------------------------------------AAAATAAAAACTTTGCCATGGTTTACACGTTGGGACAGATCGCT
TTGATACAGTCCATTACAGATACGAAGACGTG---------CAAGAGCAGGTCTCGGAGATTAAACGGGATACAAGTTAC
G---TGCCTTATATT------------GATCCCGTGGAGCAGATTTTCCGAGGGGTTCAGATCGACCGCAGCGGATTGCA
TCGAGAGATCGACTTCGACGAACAC--TTCCTCACGATCAGAGATGCGCTCCGACGAGCTCCCCGTCG------------
---------------------------------ACTCCGCCGGAGTGGAGCTGCAGCTCTTTCACGGGCACA--------
-ACGACGGCGACGGCAGCGCCAGGTTCGTGGACGAGGAAGCCTGGGCAGAGTCATCATCGGCGACGGCTCTGGATGTGGC
GAAGCGGGCGGCGGTGGGAGTGGGCGCGCGGGTGCTCTTCTACCCGAAGCTGGCCTACAAGCTGGTGGCCGGCCGGTCGG
CTCCGGGTAAAGCCTCGGAGGAGTCGTCGTCATCGTC------ATCGGCGACGACTCTAGACGCCGCGAAGCAAGCGGCG
GTGGGCGTGGGCGCGCGGGCGCTCTTCTACCCGACGCTCGCCTACAGCCTGGCCCGGAACCGCCTCTCGCCGGCCGGCTT
CAAGTGGTGGCACAAGATCACGGACACCCACATGCTCCTCGGCGCTGTCCCGTTCCCGAGCGACGTGCCGCGCCTCCGCG
CCCTGGGCGTCACCGCCGTGGTCACGCTCACCGAGCCCTACGAGCGGCTCGTCGACGCGAAGCTGTACAAGGCCCACGGC
ATGGAGAACCTGGTGCTGCCCACCACGGACTACCTCTACGCGCCGTCGCAGAAGGACCTCCGCGACGCCACGGCGTTCAT
CCACGGCAAGGAGGGCGGCGGGCTGACC---TACGTGCATTGCAAGGCCGGGCGCGCGCGCAGCGCCACGGTGGTGATGT
GCTACCTGGTGCGGTACAAGGGGATGACGACGAAGCAGGCGTACGATCACGTGCGGTCGTGCCGGTCCAGGGTGTCGCTG
GCTCCGGCGCAGTGGCAGGCGGTCCAGGACTTCGAGGACTTCTACCGGCGGCCGGCCGGTAGCTCGGAGTGAAGCCAACC
GCTCCAACTCTGCGGCTGGATCATGCGAGCTCGACGCTAGGTTTTGTGTATATATATAGCTTCCACAGGTGCTGG-----
--ACGTGAGTATCAATGTTCGAACACTGTTCCGTTATTCCTAAA------------------------------------
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---------------------------------------------------------------GTAATGTACT-------
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>chr5D_2163
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--------------------------------------------------------------GGTAATGTTTGTATCCGG
TCGACCGGCCGAAACTGCGCCGGTCGCGTCCTGTCCACACGTCCTGT-----CCACACGCCGCCCTCTTTCCTTTTTCCC
TTATCCCCTTCCTCTTCCCCAAGCGTTCTCGACCATTCGTTCACCCCACCTTGTTCTCTCCCCCTCTCCAATCCGGCCCC
ACAAACGCCTGCCCCGCTAGAGCGCCTCCACACATATGCCGTCGCGCGCTGATGTTGGTGCCCGGCGCGACCACACCCCC
ATGCGTTCGGCTGTTATCGTTTTTGCGATGGGGCGGCCATCATGTGCTGCGTGCAGCTCCCGCACTTGCTGGGACTGCAA
GTACGGCAAA----------------------------------------------------------------------
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--GCTGTGACGAGGCCGGCCATGGTGTGAGCTCGCACACCAAGCTACAACCATGGGGCGGCTGGCTGAATGCATCCACGA
GGATTTTTGCTATCACAGGGAAGTCTGCTACAACCAGCGGCAGCACACGGCAAAGCTGCATCCACGGGGCAAAGATGCTA
CCGACCGGCGCGCCAAAATGCTTCGTCCGGCATATCTTTTTGCTGGAACCAGCCCA--GTCGGCTGCGAGAGTCGACGCG
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>SNPs
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSS------S---S-----S---S-------------------------------S--
-SSSSSS----------S-------SSSS-SSSSSSSSSSS-----------------------------------S--S
SSSS-----------SSSSSSSSSSSS--------S--------------------------------------------
-------------------------SS------S---S--------------------------------S---------
-------------------------------------------S------------S--------------SS-S--SSS
--S-----S---------S---S---------------------------------------------------------
-------------------------------------------------S----------------------------S-
-----------------------S--------------------------------------------------------
------S--------------------------------------------------S----------S--------S--
----------S---S------S------------SS---------------------------------------S----
S--------------S------S--S-----------------------S------------------------------
--------------------------S--------------------SS--S-S------S--SSS---S----------
----S---S--S----S-----SS--S-S----------------------------------------------S----
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------------------------S-----S-------------------------------SSSSSSSS-S-SSSSSSS
SS----------------------------------S-S-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------S--
---------------------------------------------S-SSSSS----S-S-----------------S---
----------------------S-------------------SS------------------------------------
------------------------------------S-S----------S-S-----------S---------S----S-
-----S--------------S---------------------------------S-----S---------S---------
----S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SS-------S-----------------------------S-------------------------------------S--
------------S---S-------------------------------S-------------------------------
---------------------------S---S---------------------S--SS----------------------
S
>forward_460
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----------------------------------------GGGGAGTGGACGTAGGTAGT--------------------
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>reverse_1455
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--------------TCATCGAAGGCACCCACATC----------------------------------------------
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>forward_994
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--------------TCGACGAACACACTTCCTCG----------------------------------------------
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>reverse_2551
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----------------------------------------------------------------------AGGACTGCAA
GTACCGCAAA----------------------------------------------------------------------
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