>input_sequence_67097
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-----------------ATGCGCCTCGTCACCATCCTATTCCCGCACCTGCCGATCCCGGCGCACCGCAGACGCGACACG
GCACGCGCTAGGCTCTGCGAGATATTCTCCGGCATCGTCAGCTCCCGCAAAACAAGCTACCCCGACGGTGGCCC------
------AAACGACATGCTGCAGTGCCTGATCGATTCCAGGTACAAAGACGGCCGTGCCACCACCGAGACGGAGGTCGTCG
GGATGGT---GGTCTCGGCGCTGTTCGCAGGGCAGCACACAAGCTCCAGCACGGGCACATGGACCGGAGCGCG-------
-------CCTGCTCGCGCGTGCCAACGCCAAGCACCTGCGCGCTGCCGTCCAGGAGCAGGAGCGGATCGTGGAGCGGCTC
GGGGACCGCGTGGACTACGAGGTCCTGCAAGAGATGGACACCCTCCACCGCTGCATCAAGGAGGTTCTGCGGCTTCACCC
GCCGGCCATGATGCTGCTGCGCCACGCGCGGCGGAGCTTTACCGTGCGGACCATGGAGGGCGACGAGTACCAAGTCCCGG
AGGGGCATACGGTCGCGAGCCCGCTGGTGATCCACAACCGTCTCCCGCACGTGTACAAGGACCCGGAGAGGTACAAGCCG
GACCGGTTCGGCCCCGGCAGAGGGGAGGACGCGGCCGGCGGAGCATTCTCGTACACGGCTTTCGGTGGTGGGCGGCACGC
CTGCGTAGGCGAGGCGTTCGCGTACATGCAGATCAAGGTGATATGGAGCCACCTACTGAGGAACTTTGAGATGGAGATGG
TGTCGCCGTTCCCTGAGACGGACTGGAACGTGGTCATGCCGGGGCCCAAGGGGAAGGTCATGCTCCGCTACAACAGGAGG
A---------TGTCAACGACCGCTTAA-----------------------------------------------------
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>chr1B_1_TraesCS1B01G050900
ATGTCGACAAAACATTACCATGGAAGCCTATGTGTAAGACCCGACAAATTGCAATATTACAAAAATAGTATTCTTGAGAC
ATCTCTACGTATATAGCAGACAAAGATATAATGAATTCTAAATACCAGCAATGATATGGACATGTCTGGATGGTGCCCAA
AACATACCTTAGCAATTTTTGGGTC-------------------------------------------------------
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----------------------------------------------------------AAGAAGAAAACTTTGTTTTTTG
T-TTGAGTGGCTGCCAATATTTTGGCTTGCCAATGTCTCTTTGGCAACTAGTTCAGTTTGCTTGCCAATGTTGGCCAATT
TTTGGGCAAGGAAAATTTGAGCAAAATTTAGGGTAGCTGAATTTTTACCCTATTTGTGTGGTAGCTTTGGCTTTAGGAGC
ACATGTGATTACATTATTGATGGGTGTCTCGCGTACTCACAAGTCACAACTCAGTTACTAACTTGTTTTACCACGTTCTT
ACAGAATTAG---CCCCGGCCGTCGCATTTGGAGTGCAAAGATGGAATTGACAAGAGTCCTTTGGCTAGCATCTTTTCCT
ATTTTGGTCACAATTGTGTTGATCAGAATGGCATG------GCAACGAGCGACGTTCTCCCGAACAACCAAACGATCACC
TCCTCCGCCGCCCGTGGCCACAGGGGCTCCCCTACTAGGGATCCTCCCGGCGCTTCTCATTAAGGGCCCGCTGCAAGTAA
TCCGCGACGCCCATGCAGAGATGGGGAGCGTGTTCACAATGAGACTGTTGCAACGCAAGGTGACCTTCCTGGTTGGGCCA
GATGTGTCAAGCCATTTCTTCCAAGGGCTGGATACGGAGATCAGCCAGGACGAGGTCTCACAGTTCACCATTCCGACCTT
CGGCCCTGGCGTTGCCTTCGACGTAGATTTCGCCACTCGCCGCGAACAATTCCGCTTCTTCGGCGACGCGATGAAGCCGG
CCAAGCTCAGGTCCTACGCCCGACTCATGGTGCAAGAAGTCGAGGTAGGAAATAATTAAGATGGCATCATCTTTAAGT--
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------------ACGGCATGCGCCTCGTCACCATCCTATTCCCGCACCTGCCGATCCCGGCGCACCGCAGACGCGACACG
GCACGCGCTAGGCTCTGCGAGATATTCTCCGGCATCGTCAGCTCCCGCAAAACAAGCTACCCCGACGGTGGCCC------
------AAACGACATGCTGCAGTGCCTGATCGATTCCAGGTACAAAGACGGCCGTGCCACCACCGAGACGGAGGTCGTCG
GGATGGT---GGTCTCGGCGCTGTTCGCAGGGCAGCACACAAGCTCCAGCACGGGCACATGGACCGGAGCGCG-------
-------CCTGCTCGCGCGTGCCAACGCCAAGCACCTGCGCGCTGCCGTCCAGGAGCAGGAGCGGATCGTGGAGCGGCTC
GGGGACCGCGTGGACTACGAGGTCCTGCAAGAGATGGACACCCTCCACCGCTGCATCAAGGAGGTTCTGCGGCTTCACCC
GCCGGCCATGATGCTGCTGCGCCACGCGCGGCGGAGCTTTACCGTGCGGACCATGGAGGGCGACGAGTACCAAGTCCCGG
AGGGGCATACGGTCGCGAGCCCGCTGGTGATCCACAACCGTCTCCCGCACGTGTACAAGGACCCGGAGAGGTACAAGCCG
GACCGGTTCGGCCCCGGCAGAGGGGAGGACGCGGCCGGCGGAGCATTCTCGTACACGGCTTTCGGTGGTGGGCGGCACGC
CTGCGTAGGCGAGGCGTTCGCGTACATGCAGATCAAGGTGATATGGAGCCACCTACTGAGGAACTTTGAGATGGAGATGG
TGTCGCCGTTCCCTGAGACGGACTGGAACGTGGTCATGCCGGGGCCCAAGGGGAAGGTCATGCTCCGCTACAACAGGAGG
A---------TGTCAACGACCGCTTAAATCATGATCCTTCAGAGACCCTACATATATCTACTACTACATATATGG-----
-------------------ACCAATAAATTACA------------------GTTGCGCCGTGCATAGTTGAACTACTGTA
TTTGTTCGACAAGCCAACGGTGGAGGGCACTTTCGTGAGTGACATAATAGTGGTGGCCCTGTGTGTGTGTGTGTGCACAT
TGTTGTTTTTCTCGATGGAGACTATAGCTAAA-ACTTTAAGACTTGTGAATGTATTATACCGCCTCTTATAGCAAAACAT
AAAGCATATAAATTTGGTTGTAGTTCAAAATGTTCTAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCAAAAAAAAGTA------------------------
---------------------AATCAGTGATAGAGATAATAAACGTGCCCCTTCAGTTTAAAGGGCACGATGGGCAAATT
AACAACTAATCTGTTCACTAGTTCATGT----------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------ACATAGGTTAGATAG
TAGGAAATCCTCTAACAAACTTGAAACCATATCTAGTACATAAATTTAGCAACAACAAAACACAGTAAATCCCAGTTGAT
ACACCTTTTGTAAGAAAAAAACTATGATTATCGTATAATTGTGAAGGTACTTGTTAAACACAAGAAAACCCTAATTATTG
TCAAAGCACAAATAG---------TGAATATGCACCGACCTATGTAAAATACTCCAGTATATTATGTTCCAGCGCTCTCT
TTAATGTCTAAACTCGCCAACTATAATAATCCATGAAGTTT
>chr1D_98
AGACAAG-------------------------------------------------------------------------
------------------------GATATAATGAACTCTAAAAACCAGCAAGGATATGGACATGTCTGGATGGTGCCCAA
AACATATCTTAGCAATTTTTGGGTCAAAAATGTTGACGTATAATGTGTTGTCTAGTCTCTTCCATCAGATTGGGTCTTTT
GGTTGCATTGACTAGACTATGCACTTTTACATGGTATCAGAGCCAAGAGGTCTTGAGTTCAAGACCCGGCTGGCGCAATT
AAATTGCAGCCCACTTTTGGTCCACGTATTGGCCTGAGGGAGCCACACGTGAGGGGAATGTCGACGTATAATGTGCTGCC
AAGTCTCTTCCATCAGATCGGTCTTTTCGTTGCATTGGCTAAAGCATGCACTTCTACAAAGAACAAAACTTTGTTGTTGT
TCTTGAATGGCTGCCAATATTTTGGCTTGCCAATGTCTCTTTGGCAACTAGTTTAGTTTGCTTGCCAATGTTGGCCAATT
TT-GGGCAAGGAAAATTTGAGCAAAACTTAGGGTAGCTGAATTTTTACCCTATTTGTGTGGTAGTTTTGGCTTTTGGAGC
ACATGTGATTACATTACTGATGGGTGTCTCGCGTACT---AAGTCAGAACTCGGTTACTAACTTGCTTTACCATGTTCTT
ACAGTATTACCCCGGTC----ATCGCATTTGGAGTGCAAACATGGAATTGACAAGAGTCCTTTGGCTAGCATCTTTTCCT
ATTTTCGTCACAATTGTGTTGATCGAGATGGCACG------GCGACGAGCGACGTTCTCCCTAACAACCAAACAATCACC
TCCACCGCCGCCCATGGCCACAGGGGCTCCCCTTCTAGGGATCCTCCTGGCACTTCACACCAAGGGCCCACTGCAAGTGA
TCCGCGACACCCATGCAGAGATGGGGAGCGTGTTCACAGTGAGACTGTTGCATCGCAAGGTGACCTTCCTGGTTGGGCCA
GATGTGTCTAGCCATTTCTTCCAAGGGCTGGACTCAGAGATCAGCCAGGACCAGGTCTCACAGTTCACCATTCCAACCTT
CGGCCCCGGTGTGGCCTTCGACGTAGACTTCGCCACTCGCCGCGAACAATTCCGCTTCTTCGGCGACGCGATGAAGCCGG
CCAAGCTCAGGACCTACGCCCGGCTCATGGTGCAAGAAGTCGAGGTAGGAAATAATTAAGATGGCATCATCTTTAAGTAC
A--TAGTTGCAACGATCGTTTAGAAACTCTGATGTGATTGTCTAC----------------------TACGTATTGTGTG
TGTTATGCATGCATGAAGGATTTCTTTGCGAAATGGGGACCGACCGGCACGGTTGACTTGAAGCAGGAGCTAGAGCACCT
CGTCACGCTCGTCGCCAGCCGGTGCTTGTTCGGGGAGGAGGTCCGGGCCAAGATGCTTGCCGAGGTCGCAACGCACCTCC
GGGAACTCAACGATGGCATGCGCCTCGTCACTATCCTGTTTCCGCACCTGCAGATACCAGCGCACCGCAGACGCGACACG
GCGCGCGCTAGGCTCGACGAGATATTCTCCGGCATCGTCAGCTCCCGCAAAACAAGCTACCCCGACGGTGGCCC------
------AAACGACATGCTGCAGTGCCTGATCGATTCCAGGTACAAAGACGGCCGCGCCACCACCAAGACGGAGGTCGTCG
GGATGCT---GGTTTCGGCGCTGTTCGCGGGGCAGCAAACAAGCTCCAGCACGGGCAC--------------G-------
-------CCTCCTCGTGCGCGCCAACGCAAATCACCTGCACGCTGCCGTCCAAGAGCAAGAGCGAATCATGGAGCGGCAC
GGGGACCGCGTGGACTACGAGGTCCTGCAGGAGATGGAAACCCTCCACCGCTGCATCAAGGAGGTTCTGCGGCTCCACCC
GCCGGCGATGATGCTGCTGCGCCACGCGCGGCGGAGCTTCACCGTGCAAACTAAGGACGGCGACGTGTACGAAGTCCCGG
AGGGGCGTACGGTCGCGAGTCCGCTGGTGATCCACAACCGTCTTCCGCATGTGTACAGGGACCCGGAGAGGTATGAACCG
GACAGGTTTGGCCCCATCAGAGGGGAGGACGGGGCTGGCGGAGCGTTCGCATAGACGGCGTTCGGTGGTGGGCGGCACGC
CTGCGTCGGCGAGGCGTTCGCGTGCATGCAGATCAAGGTGATATGGAGCCACCTGCTGAGGAACTTTGAGATGGAGATGG
TGTCGCCGTTCCCTGAGACGGACTGGAACGTGGTCATGCCGGGGCCCAAGGGGAAGGTCATGCTTCGCTACAACAGGAGG
A---------TGTGAACGACCGCTTAAATCATGAGCCTTCAGAGACCCTACATATATCTACTTCATGTTGCC--TGTTAC
TTTATCCTGGCAGAAAGGCACCAATAAATTACAGTTGTAA---AGTTAACCGTTGCGCCGTGCATACTTGAACTACTGTA
TTTGTTCGACAAGCCAACGGTGGAGGGCACTTTCGTGAGTGACATAATAGTGGTGACCCTGTGTGTGTGTGC--GCACAT
TGTTGTTTTTCTCGATGGAGACTGTAGCTAAACACTTTAAGACTTGTGAATGTATTATACCGCCTCTTA--GCAAAACAT
AAAGCATATACATTTGGTTGTAGTTCAAAATGTTCTAATTTCAACCAAGTGTGNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNAATCAGTGGTAGAGATAATAAACATACCCCTTCTGTTTAGATGGCATGATGGGCAAATT
AACAACTAATCTGTTCACTAGTTCATGAACGCACAGATAGCCCAACCTGCCCAAAGTCAAATTTTTCATCTTTTTTTGGT
ACTACAACTCAAATTTGTCATCAACTAAACATACAAGTTAAACATAGAAATACATATATAGCTTTGTACTTTTCCGTCTA
TTAGTCTTTGTTTTCCATTGGATTCTGAAACTTTTCAGGCTTTCTTCACAAATCCTCTTGATACAACATAGGTTAGATAG
TAGGGAATCCTCTAGCAAACTAGAAACCATATCTAGTACAGAAATTTAGCAACAACAAAACACAGTAAATCCCCATTGAT
ACACCTTACAAAAAAT--------TGATTATTGTATAAATGTGAAAGTACTTGTTAAACA------AACCGTAATTCTTA
TCAAAGCACAAATAGAATCCCTTATGGATATGCACCTGTGTA---AAAATAATCCAGTACATTATATTCGAGCACTCTCT
AGTCCAAGCTCACCAACC-------ATAATCCATGAAGT--
>chr1A_384
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-----------------TGATGGGTGTCTCGCGTACTCACAAGTTACAACTTAGTTACTAACTTGTTTTACCATGTTCTT
ACAGTATTACGTACCCCGGCAATCGCATCTGGAGTCCAAACATGGAATTGACAAGAATCATTTGGCTAGCATCTTTTCCT
ATTTTGGTCACAATTGTGTTCACCGGAATGGCGTGGCTACAGCGACGAGCGACGTTCTCCCCAACAACCAAACGTTCACC
ACCTCTGCCGCCCGAGGCTGCAGGGGCTCCCCTTCTTGGGATCCTCCCATCACTTCTCACCAAGGGCCCGCTGCAAGTGA
TCCGCGATGCCCACGCAGAGATGGGGAGCGTGTTCACAGTGAGTCTGTTGCATCGCAAGGTGACCTTCCTAGTTGGGCCA
GATGTGTCGAGCCATTTCTTCCAAGGGCTCGACTCGGAGATCAGCCAGGACGAGGTTTCACAGTTCACCATTCCGACCTT
CGGCCCCGGCGTCGCCTTCGACGTAGATTTCGCCACTCGTCGCGAGCAATTTCGCTTCTTCGGCGATGCGATGAAGCCGG
TCAAGCTTAGGACCTACGCTCGCCTCATGGTGCAAGAAGTTGAGGTAGGAAATAATTAAGATGGCATCATCTTTAAGTAC
ATATAGTTGTCTCGATCGTTTAGAAAGTCTGATGTGATGTCTACTATGTACTACTTGTGTATGTTATTATTGCATA----
----------------AGGAATACTTTGCGAGATGGGGACCAACCGGCACGGTTGACTTGAAGAAGGAGCTGGAGCACCT
CATCACGCTCGTCGCCAGCCGGTGCTTGTTCGGGGAGGAGGTCCGGGCCAAGATGCTGGGTGAGGTCGCAACGCACCTCC
ATGAACTCAATGACGGCATGCGTCTCGTCACCATCCTATTCCCGCACCTGCCGATCCTGGCGCACCGCAGACGCGACACG
GCGCGCGCTAGGCTCGGCGAGATATTCTCCGGCATCGTTAGTTCCCGCAAAACAAGCTACCCCGATGGTGGCCC------
------AAACGACATGCTGCAGTGCCTGATCGATTCCAGGTACAAAGACGGCCGCGCCACCACCGAGACGGAGGTCGTCG
GGATGCT---GGTCTCGGCGCTGTTCGCGGGGCAGCACACAAGCTCCAGCACGGGCAC--------------GTGGACTG
GAGCGCGCCTCCTCGCGCACGCCAATGGCAATCACCTGCGCGCTGCCGTCCAGGAGCAGGAGCAGATTGTGGAGCGGCAC
GGGGACCGCGTGGACTACGAGGTCCTGCAGGAGATGGATATCCTCCACCGCTGTGTCAAGGAGGTTCTGCGGCTCCACCC
GCCGGCGATGATGCTGCTGCGCCACGCGCGGCGGAGCTTCACCGTGCGAACCAGGGAGGGCGACGAGTACCAAATCCCGG
AGGGGCGTACGGTCGCAAGCCCGCTAGTGATCCACAACCGTCTCCCGCATGTGTACAAGGACCCGGAGAGGTACGAGCCG
GACCGGTTCGGCCCCGGCAGAGGGGAGAACGGGGCCGGCGAAGCGTTCTCGTACACGGCGTTCGGTGGTGGGCGGCATGC
CTGCGTGGGCGAGGCGTTCGCGTACATGCAGATCAAGGTGATATGGAGCCACCTGCTGAGGAACTTCGAGATGGAGATGG
TGTTGCCATTCCCTGAGACGAACTGGAACGTGGTCATGCCGGGGCCCAAGGGGAAGGTCATGGTCCGCTACAACAGGAGG
A---------TGTCAGCGGCCGCGTAATTCACGAGCCGACAGAGACCCTACATATATCTACATCATGTTGCATATGCTAC
TTTCTCCTA--------GCACCAATAAATTAGGATTACCATTTAGTTAACCGTTGCGCCGTGCACAGTTGAACTACTGTA
TTTGTTCGACAAGTCAACCGCGGAGGGCACTTTCGTGAGTGACATATGACCC---------TGTGCGCGTGC--GCACTT
TGTTGTTTATCTTGAGGGAGACTACAGCTAAACACTTTAAGTCTTGTGAAT-----------------------------
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>chr2D_469
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-------------------------CATCTGGATTGCGAACATGGAATTAGCAATAGTCCTCTGGGTAGCATGTTTTCCT
ATTTTCTTGGCAATCTTGTCGACAATGATGGCCCG------ACGACGACCGACGGTCTCCCAAACAACGAAGCGATCACC
TTCTCCACCGCCCATGGCCCCAGGGGCTCCCCTTGTTGGGATCCTCCCGGCGCTTCTCGCCAAGGGCCCGCTGCAAGTGA
TTCGCAACGCCCACACGGAGATGGGGAGCGTGTTCACGGTGAGGCTGTTGCATCGCAAGGTGACCTTCCTGGTTGGGCCA
GACGTGTCGAGCCATTTCTACCAAGGGCTGGACATGGAGATTAGCCAGGACGAGGTCTCCCGGTTCACCATTCCGACTTT
CGGCCCCGGCGTCGCCTTCGACGTGGACTTCGCTACTCGTCGCGAGCAGTTCCGCTTCTTTGGTGACGCCATGAAGCCGG
CCAAGCTCAGGACTTACGCCGGACTTATGGTGCGCGAAGTCGAGGTAAGAAATAAGATGATAT-----------------
-----------------GTCTAGTAGCCTTGATTTTCTTGTTAAC----------------------TATTGCATATGTC
ACA--------CATGCAGGAGTACTTTGCTAGATGGGGACAGTCCGGCACGGTTGACTTGAAGCAGGAGCTAGAGCACCT
CGTCACGCTCGTAGCCAGCCGGTGCTTGTTCGGGGAGGAGGTCCGGGCCAAGATGTTCGGCGAAGTCGCAACGCACCTCC
GTGAACTCAACGACGGCATGCGCCTCGTCACCATCATGTTCCCGCACCTGCCCATCCCGGCGCACCGCAGGCGCGACAGG
GCGCGTGCTAGGCTCGGCGAGATATTCTCCGACATCGTCAGCTCCCGCAAAGCAAGCTACCCTGACGGCGGCCC------
------CGACGACATGCTGCAATGCCTGATCGATTCCAGGTACAAAGACGGCCGCGCCACGACCGAGACGGAGGTCGTCG
GGATGCT---TGTCTCGGCGCTGTTCGCGGGGCAGCACACAAGCTCCAGCACGAGCAC--------------GTGGACCG
GAGCGCGCCTCCTCGTGCGCGCCAACTCCGAGCACCTGCGCGCCGCCGTCCGGGAGCAGGAGCGGATCGTGGCACGGCAC
GGCGACCGCATGGACTACGAGGTCCTGCAGGAGATGGACACCCTCCACCGCTGCGTCAAGGAGGTTCTGCGGCTCCACCC
GCCGGCGATGATGCTGCTGCGTCACGCGCGCCGGAGCTTCACCGTGCGGACCAGGGAGGGTGACGAGTACGAGATCCCGG
AGGGGCGCACCGTCGCGAGCCCGCTGGTGCTCCACAACTGTCTCCCGCACGTGTACAGGGACCCGGAGAGGTACGAGCCG
AACAGGTTCGGTCCGGGCAGAGGGGAGGACGGGGCCGGCGGAGCATTCTCATACACGGCGTTCGGTGGCGGGCGGCACGC
CTGCGTCGGCGAGGCGTTCGCGTACATGCAGATCAAGGTGATATGGAGCCATCTGCTGAGGAACTTCGAGATGGAGATGG
TGTCGCCGTTCCCCGAGACGGACTGGAACGTGGTCATGCCGGGGCCCAAGGGGAAGGCCATGGTCCGCTACAGCAGAAAG
A------GGATGTCAGCGGCCGCCTAAATCACGA----------------------------------------------
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>chr2D_996
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------------ACGGCATGCGCCTCGTCACCATCCTCTTCCCGCACCTGCCGATCCCAGCGCACCACAGACGCGACAGG
GCGCGCGCTAGGCTCGGCGAGATATTCTCCGACATCATCAGCTCCCGAAGAGCAAGCTACCCTGACGGTAGTGCCCGGAA
CGTCAATGACGACATGTTGCAGTGGCTGGTCGGTTCCAGGTACAAAGACGGCCGCGCCACCACCGAGGCCGAGGTCGTCG
GCATGCT---GGTCTCGGCGTTGTTCGCGGGGCAGCACACAAGCTCCAGCACGGGCAC--------------GTGGACCG
GGGCGCGCCTCCTCGCGCGCACCAACGCCGAGCACCTGCGCGCCGCCGTCCGGGAGCAGGAGCGGATCGTGGCACGCCAC
GGGGACCGCGTCGACTACGAGGTCCTGCAGGAGATGGACACCCTCCACCGCAGCGTCAAGGAGGCTCTGCGGCTCCACCC
GCCGGCGATGCTGCTGCTGCGCCACGCGCGCCGCAGCTTCACCGTGCGGACGAGGGAGGGCGACGAGTACGAGGTCCCGG
AGGGGCGTACAGTCGCGAGCCCGCTGGTGCTCCACAACCGCCTCCCGCACATCTACAGGGACCCGGAGAGATATGAGCCG
GGCCGGTTCGGCCCCGGCGGAGGGGAGGACGGGGCCGGCGGAGCATTGTCGTACACGGCGTTCGGTGGCGGGCGGCACGC
CTGCGTCGGCGAGGCGTTCGCCTACATGCAGATCAAGGTGATATGGAGCCACCTGCTGAGGAACTTTGAGATGGAGATGG
TGTCGCCGTTCCCCGAGACGAACTGGAACGTGGTCATGCCGGTGCCCAAGGGGAAGGTCATGGTCTGCTACAACAGAAGG
A------GCATGTCACCGGCCGCCTAAATCACGAGCCGACAGACACACT-------------------------------
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>chr2B_996
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------------ACGGCATGCGCCTCGTCACCATCCTGTTCCCGCACCTGCCCATCCCGGCGCACCGTAGACGCGACAGG
GCGCGTGCTAGGCTCGGCGAGATATTCTCCAGCATCGTCAGCTCCCGCAAAGCAGGCTACCCCGACGGTGGTCC------
------GGATGACATTCTGCAGTGCCTGATCGATTCCAGGTACAAAGACGGCCGCGCCACGACCGAGACGGAGGTCGTCG
GGATGCT---TGTCTCGGCGCTGTTCGCGGGGCAGCACACAAGCTCCAGCACGGGCAC--------------GTGGACCG
GAGCGCGCCTCCTCGCGCGCGCCAACACCGAGCACCTGCGCGCCGCCATCCGGGAGCAGGAGCGGATCGTGGCGCGGCAC
GGGGACCGCGTCGACTACGAGGTTCTACAGGAGATGGACACCCTCCACCGCTGCGTCAAGGAGGTTCTGCGGCTCCACCC
GCCGGCGATGATGCTGCTGCGTCACGCGCGCCGGAGCTTCACCGTGCGGACCAGGGAGGGTGACGAGTACGAGATCCCGG
AGGGGCGTACCGTCGCGAGCCCGCTGGTGCTCCACAACCGTCTCTCATATGTGTACATGGACCCGGAGAGGTACGAGCCG
GACCGGTTCGGCCCCGCCAGAGCGGAGGATGTGGCCGGCGGAGCGTTCTCGTACACGGCCTTCGGTGGCGGGCGCCACGC
CTGCGTTGGTGAGGCATTCGCATATATGCAGATCAAGGTTATATGGAGCCACCTGCTGAGGAACTTCGAGATGGAGATGA
TGTCGCCGTTCCCCGGGACGGACTGGAACGTGGTCATGCCGGGGCCCAAGGGGAAGGCCATGGTCCGCTACAGCAGAAAG
A------GGATGTCAGCGGCCGCCTAAAT---------------------------------------------------
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>chr3A_996
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------------ACGGCATGCGCCTCGTCACCATCCTCTTCCCGCACCTGCCCATCCCGGCGCACCGCAGACGCGACAGG
GCGCGCGCTAGGCTCGGCGAGATATTCTCCGTCATGGTCAGGTCGCGCAGAGAAGCAGGCCGCCC---------------
---CGTGGACGACATGCTGCAGTGCCTGATCGATTCCAGGTACAAGGACGGCCGCGCCACGACCGACACGGAGGTCGTCG
GGATGC---TGGTGTCGGCGCTGTTCGCGGGGCAGCACACGAGCTCCAGCACGGGCAC--------------GTGGACCG
GGGCGCGCCTCCTCGCGCGCGCCAACGCCGAGCACCTGCGCGCCGCGGTCCGGGAGCAGGAGCGGGTCGTGGCGCGGCAC
GGGGACCGCGTGGACTACGAGGTCCTGCAGGAGATGGAGACCCTCCACCGCTGCATCAAGGAGGCCCTGCGGCTCCACCC
GCCGGCGATGGTGCTGCTGCGCCACGCGCGCCGTGGCTTCACCGTCCGGACGAGGGAGGGAGACGAGTACGAGGTCCCGG
CGGGGCGCACGGTCGCGAGCCCGCTGGTGATCCACAACCGTCTCCCGCACGTGTACATGGACCCGGAGAGGTACGAGCCG
GGGCGGTTCGGCCCCGGGAGAGGGGAGGACGGGGCCGGCGGGGCGTTCGCGTACACGGCCTTCGGCGGCGGGCGGCACGC
GTGCGTGGGCGAGGCGTTCGCGTACATGCAGATCAAGGTGATATGGAGCCACCTGCTGAGGAACTTTGAGATGGAGATGG
CGTCGCCGTTCCCGGAGACGGACTGGAACGTGGTCATGCCGGGGCCCAAGGGGAAGGTCATGCTCCGCTACAAGAGGAAG
A-------------------------------------------------------------------------------
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>chr3B_996
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------------ACGGCATGCGCCTCGTCACCATCCTCTTCCCGCACCTGCCCATCCCGGCGCACCGCAGGCGCGACAGG
GCGCGCGCTAGGCTCGGCGAGATATTCTCCGACATGGTCAGGACGCGCAGAGAATCTGGCCGCCC---------------
---CGTCGACGACATGCTGCAGTGCCTCATCGATTCCAGGTACAAGGACGGCCGCGCCACGACCGACACGGAGCTCGTCG
GGATGC---TGGTGTCGGCGCTGTTCGCGGGGCAGCACACGAGCTCCAGCACGGGCAC--------------GTGGACCG
GAGCGCGCCTCCTCGCGGGCGCCAACGCCGAGCACCTGCGCGCCGCCGTCCGGGAGCAGGAGCGGGTCGTGGCGCGGCAC
GGGGACCGCGTCGACTACGAGGTCCTGCAGGAGATGGAGACCCTCCACCGCAGCGTCAAGGAGGCCCTGCGGCTCCACCC
GCCGGCGATGATGCTGCTGCGCCACGCGCGCCGTAGCTTCGTCGTCCGGACGAGGGAGGGAGACGAGTACGAGGTCCCGG
AGGGGCGCACGGTCGCGAGCCCAATGGTGATCCACAACCGTCTTCCGCGCGTGTACAGGGACCCGGAGAGGTACGAGCCG
GGCCGGTTCGGCCCCGGGAGAGGGGAGGACGGGGCCGGCGGGGCGCTCTCGTACACGGCCTTCGGCGGCGGGCGGCACGC
GTGCGTGGGCGAGGCGTTCGCGTACATGCAGATCAAGGTGATATGGAGCCACCTGCTGAGGAACTTTGAGATGGAGATGG
TGTCGCCGTTCCCGGAGACGGACTGGAACGTGGTCATGCCGGGGCCCAAGGGGAAGGTCATGCTCCGCTACAAGAGGAGG
A-------------------------------------------------------------------------------
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>chr2A_996
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------------ACGGCATGCGCCTCGTCACCATCCTATTCCCGCACCTGCCGATCCCGGCGCATCACAGACGTGACAAG
GCGCGCGCTAGGCTCGGCGAGATATTCTCCGACATCGTCAGCTCCCGCAAAGCAAGCTGCTCCGATGGCGGCCAA---AA
CGTCGTCGATGACATGCTCCAGTGCCTGATCGATTCCAGGTACAAAGACGGCCGCGCCACGACCGAGACGGAAGTGGTCG
GAATGC---TGGTCTCTGCGCTGTTCGCGGGGCAGCACACAAGCTCCAGCACGGGCAC--------------GTGGACCG
GAGCGCGCC--------------AACGCCAAGCATCTGCGCGCTGCCGTCCAGGAGCAGGAGCGGATCATGGCGCGGCAC
GGGGACCGCGTGGACTACGAGGTCCTGCAGGAGATGGACACCCTCCACCGCTGCGTCAAGGAGGTTCTGCGGCTCCACCC
GCCGGCGATGATGCTGTTGCGCCATGCGCGCCGGAGCTTCGCCGTGCGGACAAGCGAGGGCGTCGAGTACGAGGTCCCTG
AGGGGCGCACGGTCGCGAGCCCGCTGGTGATCCACAACCGTCTCCCGCAAGTGTACAGCGATCCGGAGACGTACGAGCCG
GACCGGTTCGGCCCCGGCAGAGGAGAGGACAGGGCAGGCGGGGCGCTCTCGTACACGGCGTTCGGCGCTGGGCGGCATGC
GTGCGTCGGCGAGGCGTTCGCGTACATGCAGATCAAGGTGATATGGAGCCACCTCCTGAGGAACTTTGAGATGGAGATGG
TGTCGCCGTTCCCCGAGACGGACTGGAACGTGGTCATGCCAGGGCCCAAGGGGAAGCTCATGCTCCGCTACAACAGAAAC
ACAAGAGGGATGTCGACGGCCGCCTAAATCATGAGCCGACACAGACGCTACGTGTATCTACT------------------
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>chr2A_996
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------------ACGGCATGCGCCTCGTCACCATCCTGTTCCCGCACCTGCCCATCCCGGCGCACCGCAGACGCGACAGG
GCGCGCGCTAGGCTCGGCGAGATATTCTCCGGCGTCGTCAGCTCTCGCAAAGCAAGCTACCCTGACTGCGGCCC------
------CGACGACATGCTGCAGTGCCTGATTGATTCCAGGTACAAAGACGGCCGCGCCACGACCGAGACGGAGGTCGTCG
GGATGCTGGTGGTCTCGGCGCTGTTCGCGGGGCAGCACACGAGCTCCAGCACGAGCAC--------------GTGGACCG
GAGCGCGCCTCCTCGCGCGCGCCAACTCCGAGCACCTGCGCGCCGCCGTCCGGGAGCAGGAGCGGGTCGTGGCGCGGCAC
GGGGACCGCGTGGACTACGAGGTCCTGCAGGAGATGGACACCCTCCACCGCTGCGTCAAGGAGGTTCTGCGGCTCCACCC
GCCGGCGATGCTGCTGCTGCGCCACGCGCGCCGGAGCTTCACCGTGCGGACCAGGGAGGACGATGAGTACGAGGTCCCGG
AGGGGCGTACCGTCGCGAGCCCGCTGGTGCTCCACAACCGTCTCTTATACGTGTACATGGACCCGGAGAGGTACGAGCCG
GACCGGTTCGGCCCGGGCAGAGGGGAGGATGTGGCCGGCGGAGCGTTCTCGTACACGGCGTTCGGTGGCGGGCGGCACGC
CTGCGTTGGTGAGGCGTTCGCGTACATGCAGATCAAGGTAATATGGA---------------------------------
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>chr3D_996
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------------ACGGCATGCGCCTCGTCACCATCCTATTCCCGCACCTGCCCATCCCGGCGCACCGCAGGCGCGACAGA
GCGCGCGCTAGGCTCGGCGAGATATTCTCTGACATGGTCAGGTCGCGCAGAGAAGCAGGCCGCCC---------------
---CGTCGACGACATGCTGCAGTGCCTAATCGATTCCAGGTACAAGGACGGCCGCGCCACGACCGACACGGAGCTTGTCG
GGATGC---TGCTGTCGGCGCTGTTCGCGGGGCAGCACACGAGCTCCAGCACCGGGAC--------------GTGGACCG
GGGCTCGCCTCCTCGCGCGCGCCAACGCCGAGCACCTGCGCGCCGCCGTCCGGGAGCAGGAGCGGGTCGTCGGGCGGTAC
GGAGACCGCGTGGACTATGAGGTCCTGCAGGAGATGGAAACCCTGCACCGCTGCATCAAGGAGGTCCTGCGGCTCCACCC
GCCGGCGATGATGCTGCTGCGCCACGCGCGCCGTAGCTTCACGGTCCGGACGAGGGAGGGAGACGAGTACGAGGTCCCGG
CAGGGCGCACGATCGCGAGCCCGCTGTTGATCCACAACCGCCTCCCGCAGGTGTACAGGGACCCGGAGAGGTACGAGCCG
GGCCGGTTCTGTCCAGGGAGAGGGGAGGACGGGGCCGGCGGAGCGTTCTCGTACACGGCCTTCGGCGGCGGGCGGCACGC
GTGCGTGGGCGAGGCGTTCGCCTACATGCAGATCAAGGTGATATGGAGCCACCTGCTGAGGAACTTTGAGATGGAGATGG
TGTCGCCGTTCCCCGAGACGGACTGGAACGTGGTCATGCCAGGGCCCAAGGGGAAGGTCATGCTCCGCTACAAGAGGAGG
A-------------------------------------------------------------------------------
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>SNPs
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS-----------S------S--------S----------------------------
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------S-----------S--SS
------S----------------------------------------------S--------------------------
--S-----------------------S-------------------------------------S---------S-----
----------------S--------------------------------------------------------S------
----S----S----------SS------------------S---------------------------------------
-------------------------------------------S-----------------S------------------
---------------------------------S-------------------------SS-----------------S-
--------------------------------------S-------------S---------------------------
--------S-----------------------S-----------------------------------------------
------S-----S-------------------------------------------------------------------
-----------S--------------------------------------------------------------------
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--S------------S----------------------------------------------------------------
------------------------------------------------------S-------------------------
-----S----------------------S-----------------------------SSSSSSSSSSSSSS--------
----------S--------S----------------------------------------------------------S-
-----------------------------S--------------------------------------------S-----
------S--------------------------------S-------------S--------------------------
------S-------------------------------------------------------------------S-----
-------------------------------S---------------------------S--------------------
------S-----------------------------------------------S-------------------------
--------------------------------------------------------------------------------
----------------------------------S---------------------------S-SSSS-SS--SS-----
--------------------------------------------------------------------------------
-------------------------------------------------------S---------------SSS------
---------------------------------------------------------------------SS---------
----------S----------------------------SSSSSSSSSSSSSS---------------------------
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------------------------------------------SSSSSSSSSSSSSS------------------------
-----------------------------S--------------S-S-------S-----S-S----S------------
---------------------------S----------------------------------------------------
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----S---------S------S------------------S--------------------------------SS-----
-------SSSS--S-SSSSSSSSS-------S------S------S--------------SSSSSS----S-----S--S
--------------------------S---------SSSS--SSS------S-------S-----S---S---S------
SSSSSSSSSSS--SSS--SSSSSSS--------------SS
>forward_741
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-TTACAGAATTAGCCCCGGCC-----------------------------------------------------------
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>reverse_2616
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-------------------------------------------------------GCCCTGTGTGTGTGTGTGT------
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-----------------------------------------
