>input_sequence_67092
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-----AT---GAGGAGGGCGTGCAGTGCGAAGGAAGGGGTGAAGAGAGGGGCATGGACGAGCAAGGAGGACGAAACCTTG
GCCTCCTACATCAAGGCGCATGGCGAAGGCAGATGGAAGGAAGTCCCCTTGAAAGCTGGTACGTT--CTGCTACTAAACG
AT----CGTAACCCCTAGCTTGGTAAACAGT-AGTACCATTCCGTTCTAGACAATGGAGTGCTAGCTAGTTGAACGTGAG
TGAGTGACGCGCCTCAAATTAATT-----------------------------------TGCAGGCCTGCGGCGGTGCGG
CAAGAGCTGCCGGCTGCGGTGGCTCAACTACCTCCGGCCGAGCATCAAGCGGGGCAACATCTCCGACGACGAGGAGGAGC
TCATCGTCAGGCTCCACCGCCTCCTCGGCAACAGGTGGTCCCTCATCGCGGGCAGGCTGCCCGGCCGAACAGACAACGAA
ATCAAGAACTACTGGAACAGCACCCTCGGGCGGAAGGCGCTCCCGGAGCGAGCT---GCCACCAGG---------GTGGT
CGCCACGCCCTGCGCCTCCGCCAGCTCCGGCTCCTCCACAGGGGCGTCGAC---AGCAGGGCTGTCCTCTAACTGCGGGG
CTGGTACAAGTGCCAAGGCTGCGGGGCTGCTGTC---GTCGGCCTCGGTGTGGGTGCCCAAGCCCGTGAGGTGCACAGGC
GGTCTCTTCCTCAGCGGGGATG---------CGCCGCTGCCCGCGCCGGTC---ACGCAGACGCGGGCCGTGGGTG---G
AGACGGAGATGAGTGCAGCGGCAGCA---GCTTGGCGGCATC------------------------GTCGGGCGGCGGCG
ACTGGATGGACGACGTGAGAGCCTTGGCGTCGTTCCTCGAGTCCGACGAGGACTGGG------TCAACTCCCTGCACATG
GCGGATTAA-----------------------------------------------------------------------
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>chr5A_1_TraesCS5A01G495500
TATCTATGTCAGGGCATCTTCGGCACCAAAGTTTTGAAGCATCTGATGATGCAGGGGGGATACTCTACTGCTTTATATGT
TCCCGGAATTGTTAGTCGTGCTTGTAATCAAGCTTAGTTTTCGTCTTGAATAGAGTTCCCACCCCCTCATATGTACATAG
GATTGATGAAAATGTACATGCTTATTTTTAAACATTCACGGGTTTGAGAAAATATTAATATTAAAATAAAAAATACATTT
GTATTTTATGATATTTTTAAAAAAACCAACTGAAAATCGTAAAATTAGAGACTTCGAGAAAAAAACAATTGACAACTGCA
GGGAGCCGATGAAAGACAAATGGGCCGGCCCATATTGTGAGCGCTTGGACAACGATCCATAGGACTTGTCATAGAAATTT
GGCTGCATCCGAGCTGCCGGCGATG-TATGACGGCG--------------------------------------------
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----------------------------------------------------------------------------AAGA
AACGGCCGCGCTGTGCATCCCGATTCATTGAACACATGGAGCTTTCCTAGCCTTTTGGTCCATCTACCTCTAGAGAGAAG
TGTCGATCACGATGACCATGGC-TGAGGGTGCTAAGCAGGTCCACGTAGACGCGCTACTGTACAATGCTTAACAGGTCCA
CGTAGACGCTCTGCTGTACACTGCTCAACGGGGCCACGTAGACGCGCCTATGA--ATAAATACGGCTACAGCCCTGCTGN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNCTAACACAATACACACCGGAGATGAGGTGAGATA-GAGAGGTTAGTTCAGAGAAAGAGGAAGAGGAAGATAGAGAGGG
AGAGAAT---GAGGAGGGCGTGCAGTGCGAAGGAAGGGGTGAAGAGAGGGGCATGGACGAGCAAGGAGGACGAAACCTTG
GCCTCCTACATCAAGGCGCATGGCGAAGGCAGATGGAAGGAAGTCCCCTTGAAAGCTGGTACGTT--CTGCTACTAAACG
AT----CGTAACCCCTAGCTTGGTAAACAGT-AGTACCATTCCGTTCTAGACAATGGAGTGCTAGCTAGTTGAACGTGAG
TGAGTGACGCGCCTCAAATTAATT-----------------------------------TGCAGGCCTGCGGCGGTGCGG
CAAGAGCTGCCGGCTGCGGTGGCTCAACTACCTCCGGCCGAGCATCAAGCGGGGCAACATCTCCGACGACGAGGAGGAGC
TCATCGTCAGGCTCCACCGCCTCCTCGGCAACAGGTGGTCCCTCATCGCGGGCAGGCTGCCCGGCCGAACAGACAACGAA
ATCAAGAACTACTGGAACAGCACCCTCGGGCGGAAGGCGCTCCCGGAGCGAGCT---GCCACCAGG---------GTGGT
CGCCACGCCCTGCGCCTCCGCCAGCTCCGGCTCCTCCACAGGGGCGTCGAC---AGCAGGGCTGTCCTCTAACTGCGGGG
CTGGTACAAGTGCCAAGGCTGCGGGGCTGCTGTC---GTCGGCCTCGGTGTGGGTGCCCAAGCCCGTGAGGTGCACAGGC
GGTCTCTTCCTCAGCGGGGATG---------CGCCGCTGCCCGCGCCGGTC---ACGCAGACGCGGGCCGTGGGTG---G
AGACGGAGATGAGTGCAGCGGCAGCA---GCTTGGCGGCATC------------------------GTCGGGCGGCGGCG
ACTGGATGGACGACGTGAGAGCCTTGGCGTCGTTCCTCGAGTCCGACGAGGACTGGG------TCAACTCCCTGCACATG
GCGGATTAACGCTCACACTTTTTCT-----CAGCACGTGCACGTTTATCACTACGTACGAACAGGGAGCTGTAT------
--------------CGATACAGCTCCATGCGTGTACGTAGGTTGGCTTCGTGCTGAGTAC---TGACTAATC--AGTAGC
TACCTGTGATGGACTTCTAATCATACTCACACTCTCTCGAGCTGTTTAG-TGGATGGTGTATGAGTGGGTGTGTTCAACC
GAATAAGTGTATGTGTGTCTACACGAGCATCCACATTTTGTATTGTATTTCTAAATAAGAATCGGCCTTTTTTGGTTCAT
AGGAAAGTTGTAGGAATTGCAAAGAATAAAAACTTTGTAGGAAAAATTCCTTTGAAGCCCTTTGGTTTGTAGGAATGAGT
TCCTATTTCTATGTAGGATAAGAATTAATCCTTCACATTTCAAAGGAAAAAAACATTGGCCTAAACTCAATGAAAATTTT
TCTATCCTATGCATTAAATAACATCTCTTATTCTATAGGATTTGAGATGCATGTCATCTCACTTTCTATGATTTTTCTAT
TCTTATATTATTTCTATCCTACGAACCAAAGAAGACCTAAGTATACTTCAACATGACTAATTA-TTT-TTCTTTGAAAAG
GATGATATCTGCCAACCTCTTTTTCTTTGAGGCTAGCCATAG--------------------------------------
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----------TGGGGGTAACTTAGGTAGTAACTTAACACACCCTAAGACAATTTTGTTTATGTGGCAAGTATTTAATAAG
GAGAGAGGTGCTTGGAGTAACT----------------------------------------------------------
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-----------------------------------------TTACCATACCAAACGGGTTGTGAATGAATACGACTGGTT
AGCATTTAATTTCTTTTGGATGTCACCATACCAAATGATGGCCGTTTTCTTCAACATGCACAGCATAGTGATAAGAAATT
TGAAGCAGATGGCCACTGGCTAGCCGTGAGCGAGCCTGTGTGCGTGTGACCCATACTGGAGCACGTATACACAAGCTAGT
G-CCATACACGGTCATGCCAGTGCACGT--------ACAAAGCCGAAAGCAAACCGAGACACATGTGCCATTTTTTGC
>chr4D_370
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-------------------------------------------------CAACGATCCATAGGACTTGTCACAGAAATTT
GGCTGCGTCAGGGCTGCCGGCGATATTATGACGGCG--------------------------------------------
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----------------------------------------------------------------------------AAGA
AACGGCCGCGCAGTACATCCCGATTTATTGCACACATGGAGCTTTCATAGCCTTTTGGCCCATCTACCTCTAGAGAGAAG
TGTCGATCACGATGACCATGGGTTGAGGGTGCTAAGCAGGTCCACGTAGACGCGCTACTGTACAATGCTTAATAGGTCCA
CGTAGACGCTCTCCTGTACAACGCTGAACAGGGCCACGTAGACCCGCTGCTGA--ATAAGTACGGCAACAACCCTGCTGC
CCACAGATGACAGACCCCCTCTCACTCTCTCTCTCTCTCT----------------------------------------
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--CTAACACAACACATACTGGAGATGAGATGAGATAAGAGAGGTTAGTTCAGAGAAAGAGGAAGAGGAAGATAGAGAGGG
AGAGAATGGGGAGGAGGGCGTGCAGTGCGAATGAAGGGGTGAAGAGAGGGGCATGGACGAGCAAGGAGGACGATACCCTG
GCTTCCTACGTCAAGGCGCATGGCGAAGGGAGGTGGAAGGAAGTCCCCCTGAAAGCCGGTACGTTTTCTGCTACTAATCG
ACCGGCCGAAATCCCTAGCTTGGAAGACACT-AGGAGTATTTAGA-----------GAGAGCTG---CC-TGAACGTGAG
TGAGTGACGCGCGCCAAGTTTATT-----------------------------------TGCAGGTCTGCAGCGGTGCGG
CAAGAGCTGCCGGCTGCGGTGGCTCAACTACCTCCGGCCGAGCATCAAGCGGGGCAACATCTCCGACGACGAGGAGGAGC
TCATCATCAGGCTCCACAGGCTCCTCGGTAACAGGTGGTCGCTCATCGCGGGCAGGCTGCCCGGCCGAACAGACAACGAA
ATCAAGAACTACTGGAACAGCACCCTTGGGCGGAAGGTGCTCCCCGCGCGACTGGACACCACTAGG---------ATGGT
CGCTTCGCCCGGCGCCTCCGCCGGCTCCTGCTCCTCTACAGGCGCGGCGAC---ATCCGCGCTGTCCTCTAACTGCGGGG
CTGGTACAAGTGCCAAGGCTGCGGCGCCC---CCGTTGTCGATCGCGGTGTGGGCGCCCAAGCCCGTGAGGTGCACGGGC
GGCCTCTTCTTCGGCCGGGACG---------CGCCG---CCCCCGCCGGTC---ACGGAGACGCGCGCCGTGGGTG---G
AGACGGAGATGAGTGCAGCGGCAGCA---GCTTGGGGGCATC------------------------GTCGGGCGGTGGCG
ACTGGATGGACGACGTTAGAGCCTTGTCGTCGTTTCTTGAGTCCGACGAGGACTGGG------TCAACTCCCTGCAGATG
GCAGATTAAC-----------TTTT-----CAGCACGTGCACGTTTATCACTACGTACGAACAGGAATTTGTATTGTATG
TACAAAT----ATACGATACAGCTCCA----TGTAGGTACGTTGGCTTCGTGCTGAGTAC---TGACTAATG--AGTAGC
TACCTGTGATGTAGTTCTAATCACACTCACACTCTCGCGAGCTGTTTAGATGGATGGTGTATGAGTGGGTGTGTTCATGT
CAATAAATGTATGTTTGTGTATATGAGCATCCACATTTTGTATTGTATTTCTAAATACGAATC-----------------
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>chr4B_431
CTAACACAACGCACTGGAGATGAGATAGAGAGAAGGTTACTTCAGAGAAAGAGAAAGAGGAAGATAGAAAGAGAGAGCGA
GAGAATGGGGAGGAGGGCGTGCAGTGCGAAGGAAGGGATGAAGAGAGGGGCATGGACGAGCAAGGAGGACGAAACCTTGG
CCTCGTACATCAAGGCCCATGGCGAAGGCAGATGGAAGGAAGTCCCCCTCAAAGCTGGTACGTACTAATCCTCGCAACCC
ACGAATTAACGCTCTATTCTGTTCTAGTCTTCTAGAAAATGGAGTGCTAGTTGAACGTGAGTGAGTGACGCTCGCCAAAT
TGATTTGCAGGTCTAGGTAGTTGAACGTGAGTGAGTGACGTACGTACTAATCCGTCTGTGATCTTTTGATGAACCGATGC
ATTTTTATGTCTGCTCATGATCTAGGTAGTTTTTATCAATGTTGCATAGTTTAGTATGAATATGGGGGACGAAATATGAG
ATACACGGGTGTGAAGGCGCGGATATACAGAGCGCTCGATCCGTGCCCGCGGATGGCCTGGGGCGTATGAGGGACCGGAT
TTGCCAAGTTCGGATGTAGATGCTCTTAGTTACCTAAGAACGTTTCGATATCAGTCACATTTTTCAGGAACCATCGGATC
TTGATCGAACGGCCCACGGCCCAAAACAGATCACACCATTCATCGTCAACCTCTCTATCACTTCTTCCTCGCGCCTCCAA
CCTACCCCGCCCTCCCCCCAACCTCCTCCACCGTCCTGGCCATCCCTCTAACACCCCCTCCCCCGAATAGCAGGAACCTG
GTGAGCCCCGCACCCCTCCCCCGACCCCTCAGTTAAGTTTCTTCCTCACCTTCACTTGGGAGAGTGGCAGCCTCGGCGTG
GCCAACTTTTACCGCTGCCACTCCTCACGCCATTCCCACCTTCAGCCTCATGCATAGCAGAAATTGATTGATGCCAAGAA
AAAAAAATTCAGACACCTGAGATTTAGCAAAACCACAAAAGAATTCGATTATTTGTGTAGTTTTCAAGAAGAATGGGTAA
GCTTATTAGCGTCGTTATTCGTTACATGTGCAGGATAATGATGCATATGAAAACGGATGGATGTCGGTGTCATTACTTTG
TTGCAACTCGATCTACTTCCTTTGTTTCTAAATATTTGTGTTTCTAGATATTTCAACAAGTGTCTACATACGAAGCAAAA
TGAGTGAATCTATACTTTAAAATATGTCTATATACATCATATGTGGTAGTCTATTTGAAATCTCTAAAAAAACAAATATT
TATAAACGGAGGGAGTAGTATGGTACATAGATTTCCTCACTGTAATACCTGCTCTTTGCAGGTGTCCTTTCCTACAGAGT
TGACCCGTGTCAAACGACGAAGCGATTACAATGAAGGTACACACATAGGGAAGCAGACACCTCCTACTCGATCACTACCT
ACCGTCCAAATTAATCTCTTAGATGGAGTAGAAAATTAATTCTCTAACAAATGTATCAAAAGGACATGACAACCGTAGCA
TTTAATTTCTTTTGGATGTTACCTTACCAGATGGGTTGTCACTGAACATGACTTGCACAAAAAGGACAAATGGTGGCCGT
TTTCTTCAACATGAAAGCACAGTGATAAGAAATTTGAGGCCGATGACCACTGGTTAGCCGTGAGCCTTTGTCTGTGGGTG
TGACCCATGCCGGAGCACGCACACACAAGTGCCCATACACGGTCGAAACCATCCATGCCATGCCAGTGCACGTACAAATT
CGAAAGCAAGCCAAAACACACGTGCCATTTTTGCATGTGTGGTCACTGGTCTACAATGTTAAAACCTTGTGTTTTATTTT
CATTTTCTCTTTTTGAGAATATATTAATCTTTTCTCTTGCCGCAAACTAAGCACTCTACATGAAGCCGATGGATACCTAA
CACTGCACGCCTAGTCATGTTCACCAAGCGACAGATCAGGAAGATTATTGCCTGGGGATTGGTGACTTTCTCATGTCTGT
CCATGGATGGAACACGCAAATGGTCGATCAGCGGTGGTGCCGAGGGTTGGATCTCCCCGGACTGAGCCTCTTGGAGGTCC
CACAGACCGGATCGGCGATCTCTTGCAGTGGCCGTGCTGCGGCCGTGGTACTCTCCTACTCTAAGACGAGCTCCTTAGCC
GAAAGGTGCCCCAGCCAGCCAGATGCAGGTAGTGGAGGGTCGTTGGCAACTTCCCCACCGCAGCACCAGGGATCAAGGCC
ACCGATACGCTCGCAGGAGCGGGCCGTGTGTCAAACTTCTCTAGTTTTAGAGTTTTTTTTTAGCATCAGTACAGACACAA
GCGCCTATCATCTTGAGATTTACGAGGCCATAGTAGGCGCCTCGTCGTCGACATGAACGTCTCCTTCCATTGAAAACGCA
TCGCCAAAAATCCTGAAATAAATCCAGGAATAAAGCGAGCACCGGGATTTGAACCCTGGTGGCTTGGAAATATCACTGTC
CACCTAACCATCTCAACCACAGGTTAGTTCACCTCTAGTTATAGAGTTGACGGACGAAATCCACGCTTATCAATTTGTCG
AGGGACCAAAAATAGACTTTTCTCATTAGTAAAAGCTCAACCTTCTCTCAGCATCTGGTGGGAAGGAACCTTGGCATGCC
TCTGAGGCTCTGAGCACCCGCAACTTCCGGGGAGTCGACTGGCAGCATGTCCCTCTTCTAATAGTAAATGTTCGTGTTTC
CCCCCACCTAGACATACAAATGCAACGATTCTTAGGACTTGTCACAGAAATATGACATCAATCAAACCTGCCGGCGAAGA
AACGGCCGCGCTGCGCATCCCGATTCATTGCACACATGGAGCTTTCCTTGCCTTTTGGTCCATCCACCTCTAGAGAGAAG
TGTCGATCACGATAACCATGGC-TGAGGGTGCTAAGCAGGTCCACGTAGACGCGCTATTGTACAATGCTAAACAGGTCCA
CGTAGCCGCGCTGCTGTACAATGCTGAACGGGGCCACGTAGACGCGCTGATGTATATAAATACGGCAACAATCCTGCCGC
CCACAGATGAGATGACATAGAGAGAGGTTGCCTCAGAAGAAAGAGGAAGATAGAAAGAGAGAGA----------------
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--------------------GAG---------------------------------------------AGAGAGAGAGAG
AGAGAATGGGGATGAGGACGTGCAGCGCGAAGGAAGGGGTGAAGAGAGGGGCATGGACGAGCAAGGAGGACCAAACCTTG
GCCTCCTACATCAAGGCCCATGGCGAAGGCAGATGGAAGGAAGTCCCCCTCAAAGCCGGTACGTA--CCAATCG--ATCG
CAATCCCTAGTAAAGTTATGTT---------------------GTTCTAGACAATCCGGAGCTACCTCC-TAAACGTGAG
TGAGTCACGCGCACCAAATTGATT-----------------------------------TGCAGGTCTGCGGCGGTGCGG
CAAGAGCTGCCGGCTGCGGTGGCTCAACTACCTCCGGCCGAGCATCAAGCGGGGCAACATCTCCGACGACGACGAGGAGC
TCATCGTCAGGCTCCACCGCCTCCTCGGCAACAGGTGGTCCCTCATCGCGGGCAGGCTGCCCGGCCGAACAGACAACGAA
ATCAAGAACTACTGGAACAGCACCCTTGGCCGGAAGGCGCTCCCGGCGCGACTGGACACCACCAGG---------ACGGT
CGCCACACCCTGCCCCTCCGCCAGCTCCGGCTCCTCCACCGGGGCGTCGAC---AGCATGGCTTTCCTCTAACTGCGGGG
ATGGTACAAGTGCCAAGGCTGCGGGGCTGCTGTC---GTCGGCCTCGGTGTGGGTGCCCAAGCCCGTGAGGTGCACAGGC
GGTCTCTTCCTCAGCCGGGATG---------CGCCG---CCCCCGCCGGTC---ATGGAGACGCGGGCCGTGGGAG---G
AGACGCAGATGAGTGCAGCGGCAGCA---GCTTGGTGGCATC------------------------GTCGGGCGGTGGCG
ACTGGATGGACGACGTAAGAGCCTTAGCGTCGTTTCTCGAGTCCGACGAGGACTGGGACTGGGTCAAGTCCCTGCAGATG
GCGTATTAACGCTCACAATCTTTTTCAGCACAGCACATGCACGTTTATCACTACGTACGAATAGGGATTTGTATTGTATG
TGCAAAT----GTACGATACAGCTCCT----TGTACGTACGTTGCCTTCGGGCTGAGAGCACTTGACTAATGAGAGTAGC
TACCTGTGA----CTTCTGATCATACTCACACTCTCTCGAGCTGTTTAGATGGATGGTGTCTGAGTGGGTGTGTTCAACC
GAATAAGTGTATGTGTGCCTACACGAGCATCCACATTTTGTATTGTATTTCTAAATAAGAATC-----------------
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-------------------------------------TAATTATACTTCAACGTGGCTCTAATTTTTCTTCTTCGAAAAG
GAGGATATCTGCCAACCTCCTTTTTTTTGATAAAGATATCTGCCGACCTCTGCATCGAGAAGTGGATGGATCTAGATGAC
AATAAATGCCTAAGAATTGGATGGACGTCGTCGGTGTCGTTGGAGACGTACTTTGTTGCAACGCTATGATTTCCTCACTA
TATAGGTGTATGTTTTCTGCACAGTTGACTCGTGTCAAATGCAGTTGCAAACCCACGTTCAAGCAGTGTGGTCACTTGAC
CACACAACATTTTGGTGAAACTCTTAAGTGCAAGTAAAAATTATGCAGAAGATGGAAGAAAATTTGTAAATACACATGTA
TTTGACATCGCAAGTTTAAATTGACATCACATACGTGAACTTCTGGCACGGCCACTGGTCAAATGGCAAGGGAAACAATG
CTTTCTTTTACGATTACAAAGAAGACACCACAACAAACATCTCCCACTCTACCAACAATCCAAGAGGTGGCTCCTCGTGA
AAAGCATTCACAAGAAAATGGCCTACCCGCGGTGGTTTGATGGCAGTGTGTTGTGTTCATGATGATAGTAATGCCATGAC
TATCGTTGACCCCACTGGCGACATAGCCACTGGGAGTTGTTATCCTTTTGTTGAGGCGTCGTCGAAAAAGCTACGGGCCT
CTTCAACCTCAACTAATAAATACCCCGTGAATTTCACTGGATGTGCCCTCTTCCTTTTTGTTTCTAATCTAACCCCGCCA
CATCAGTTCGCAAGAGTCTGCCTGTAGATGTAGCTTTACTCTCTCTGTATTAATGTAATTGCTTTCCGAGCGAAAGCCCT
AGACCCAGCTTTGTTGGATCGGGAACGGCAACCGCAACAAAACATATATGTGAAACGAACACATAGATACTCTCTTCGAT
CCAAATTAATTGTGGCAACTTTAGTTTATTACTAAAATTGTACTAAGACTGGGACAATTAATATGAATCGGAGGGAGTAC
ATTGGTTTGATAGATCGATGTTTGGTAAAGTCCTAAAAAATTTCTTCTAGGGTTATTTTGTACACCTTCAGTTCCAAAAT
AAGTGATGTGGTTTTAATTTAAATTTAAGCTAAAAGCACGAGACACATTTTGGAACTAAGGGAGTAGCATTTTTTCTTTG
TGGGTGAAGAGAGTAGCATTTGAAGACCGTTCCGTCCAAACATTTAATGAGTCTCTGTCTGTTTCTTTGCGGGGGTAATT
TGTACCTAGAGTAACAAAGAAAACAATGATTTGACAAATGCGTCAAAAGGTACAGCCTCGAGGACATGACAACTATAGCA
TTTAATTTCTTTTGGATGATACATTTAATTTCTTTTGGGTGTTACCATACCAAACGGGTTGTGAATGAATACGACTGGTT
AGCATTTAATTTCATTTGGATGTTACAATACCAAATGATGGCCGTTTTCTTCAACATGCACAGCACAGTGATAAGAAATT
TGAAGTAGATGGCCACTGGCTAGCCGTGAGCGAGCATGTGTGCGTGTGACCCATACTGGAGCACGTATACACAAGTTAGT
GCCCATACGCGGTCATGCCAGTGCATGCATGCATGCACAAAGTGAAAAGCAAACCAAAACACATGTGCCATTTT----
>chr4D_463
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-----------------------TTCATTGCACAGATGGAGTCTTCCTAGCCTTTTGATCCATCTAACTCT-GAGATAAG
TGTCGCTCACGATGGCCGTGGGTTGAGGGTGCAAAGCATGTCCACGTAGACGCGCTACTGTACAATGA-TAACAGGTCCA
CGTTGACGCGCTGGTG------------------------------------A--ATAAATACGGCAACAACCCCGCTGC
CCGCAGATGACAGACCC--------TCGCTCACTCGCTCT----------------------------------------
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--CTAACACAACACCCACTGGAG---------------------------------------------AGAGAGAGAGAG
AGAGAATGGGGAGGAGGGCGTGGAGTGCCAAGGAAGGGGTGAAGAGAGGGGCATGGACGAGCAAGGAGGACGAAACCTTG
GCCTCCTACGTCAAGGCGCATGGCGAAGGCAGATGGAAGCAAGTCCCACTGAAAGCTGGTACGTT--CTGCTACTAATCG
AC----CG-AATCCCTAGCTTGGTAGACACT-AGACAGTAGGAG---TAGAAAATGGAGAGCTA---CC-TGAACGTCAG
TAAGTGACGCGCGCCAAATTGATT-----------------------------------TGCAGGTCTGCGGCGGTGCGG
CAAGAGCTGCAGGCTGCGGTGGCTGAACTACCTCCGGCCGAGCATCAAGCGGGGCAACATCTCCGACGACGAGGAGGAGC
TCATCGTCAGGCTCCACAGGCTCCTCGGTAACAGGTGGTCGCTCATCGCGGGCAGGCTGCCCGGCCGAACAGACAACGAA
ATCAAGAACTACTGGAACAGCACCCTTGGCCGGAAGGCGCTCCCGGAGCGATCT---GCCACCAGG---------ATGGT
CAGCACGCCATGCGCCTCCCCCGGCTCCGTC---------------------------------TCCTCCAACTCCGGGG
CTGCTACAAGCTCCAACGCTGCGACGCCC---CCGTTGTCGGCCGCAGTGTGGGCGCCCAAGCCCGTGAGGTGCACGGGC
GGCCTCTTCTTCCACGGGGATG---------------------------------------CGCGGGCCGTGGGAG---G
AGACGGAGATGAGTGCAGCGGCAGCA---GCTTGGTGGCATC------------------------GTCGGGCGGTGGCG
ACTGGATGGACGACGTTAGAGCCTTGGCGTCGTTTCTTGAGTCCGACGAC------GACTGGGTCAACTCCCTGCAGATG
GCGGGTTAACGCTCACACTTGTTTT-----CAGCACGTGCACGTTTATCACTACGTACGAACAGGGAGCTGTATCGTACC
CCACAAATGTAGTACGATACAGCTCCA----TGTACGTACGTAGGCTTCGTGCTGAGTAC---TGACTAATGAGAGTAGC
TACCTGTGA----CTTCTAATCATACTCACACTCTCTCGAGCTGTTTAGATGGATGGTGTATAAGTGGGTGTGTTCAGCC
GAATAAGTGTATGTGTGCCTACACGAGCATCCACATTTTGTATTGTATTTTTAAATAAGAATC-----------------
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-------------------------------------TAAGTGTACTTCAACGTGGCTCTAATTTTT-TTCTTTGAAAAG
AAGGATATCTACCGATCTCTTTTTCTTTGATAAAGATATATGCCGACCTCTGCATCGAGAAGTGGATGGATCTAGATGAC
AATAAATGCCTAAAAATTGGATGGAT---GTCGGTGTCGTTGGAGACGTGCTTTGTTGTAATACTATGATTTCCTCACTA
TATAGGTGTATGTTTTCTGCACAGTTGACTCGT-----------------------------------------------
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---------------------------------------------------------GTCAAATGGCAAGGGAAACAATG
CTTTGTTTTACGATTACAAAGAAGACACCACAACAAACATCTCCCACTCTACCAACAATCCAAGAGGTGGCTCCTCGTGA
AAAGCATTCACAAGAAAATGGCCTACCCGCGGTGGTTTGATGGCAGTGCGTTGTGTTCATGATGATAGTAATGCCATGAC
TATCGTTGACGCCACTGGCGACATAGCCACTGGCAGTTGTTTTCCTTGTTGAGACGCTGTCG---AAAAGCTACGGGCCT
CTTCAACCTCAACTAATAAATACCCCGTGAATTTCACTGGATGTGCCTTCTTCCTTTCTGTTTCTAATCTAACCCCGCCA
CATCAGTTCACAAGAGTCTGCCTGTAGATGTAGCTTTACTCTCTCTATATTAATGTGATTGCTTTCCCAGCGAAAGCCCT
AGACCCAGCTTGGTTGGATCGGGAACGGCGACCGCAACAAAACATATATGTGAAACGAACACATAGATACTCTCTTCGAT
CCAAATTAATTGTGGTAACTTTAGTTTATTACTAAAATTGTACTAAGACTGTGACAATTAATATGGATCGGAGGGAGTAC
ATTGGTTTGATAGATTGATGTTTGGTGAAGTCCTAAATTTTTTCTTCTAGGGTCATTTTGTACACCTTCAGTTCCAAAAT
AAGTGATGTGGTCTTAATTTAAATTTAAGCTAAAACCACGAGACATGTTTTGGAACGAAGGC------------------
-----------AGTAGCAATTGAAGACCGTTCCGTCCAATCATTTAATTAGTCTCTATCTGTTTCTTTGCGGGGGTAATT
TGTACC-----TAACAAAGAAAACAATGATTTGACAAATGTGTTAGAAGGTACAGCCTCGAGGACATGACAACTATAGCA
TTTAAT-----------------------TTCTTTTGGATGTTACCATACCAAACGGGTTGTGAATGAATACGACTGGTT
AGCATTTAATTTCTTTTGGATGTTACCGTACCAAATGATGGCCGTTTTCCTCAACATGCACAGCATAATGATAAGAAATT
TGAAGCAGATGGCCACTGGCTAGCCGTTAGCGAGCCTGTGTGCGTGTGACCCATAGTGGAGCACGTATACACAAGCTAGT
GCCCATACACGGTCATGCCAGTGCACGTACGT----ACAAAGTCGAAAGCAAACCAAAACACATGTGCCATTTTT---
>chr4D_1019
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--------------------------GCGACGGAAGGGGTGAAGAGAGGGGCATGGACTGGCAAGGAGGACGAAACCTTG
GCTTCCTACGTCAAGGCGCATGGCGAAGGCAGATGGAACGAAGTCCCCCAGAGAGCTGGT--------------------
--------AAGTCCCTAGCTAGGTAAACAGAATCAA---------TCTAGACAATGGAGTGCTAAACG------------
-------------------TAATT-----------------------------------TACAGGTCTTCGGCGGTGCGG
CAAGAGCTGTCGGCTGCGGTGGCTGAACTACCTCCGGCCGAACATCAAGCGGGGAAACATATCCAACGATGAGGAGGACA
CCATCGTCAGGCTCCACGCTCTCCTTGGCAACAGGTGGTCGCTCATCGCTGGCAGGTTGCCCGGCCGAACAGACAACGAA
ATCAAGAACTACTGGAATAGCACCCTTGGCCGGAAGGTGCTTCCCGCACCACATTCCGCCACCAGG---------ATGGT
TGCCACGCCAGACACCTCCGCCGGCTCCGGATCTTACACAGAGGCGTCGGC---AAGTCTG------TCTAGCTCTGGAC
CTGGTACAAGCGACAAGGCTGCGACGCCGTCGCCGCTGCCGGCCACGCTGTGGGCGCCAAAGCCTGTGAGGCACACGGGG
CACCCCTTCTTCCTCCGGGAT------AGGCCGCCG---CCCTTGCCGGTT---GCGGAGACGCGAACCGTGGCCA----
--ACGGGGATGCCTGCAGCGGCAGCA---GCTCGGTGACATCG-------------------------------------
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>chr7B_1043
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--------------------------------------------------GCGTGGACGAGCAAGGAGGACGAAATCCTG
GCTTCCTACGTCAAGGCCCATGGCGAAGGCAGGTGGAGGGAGCTCCCCCAGCGAGCTGGTACGTA--CTAATCC--ATCG
TAATGACGTAATCCCTAGCTAGCCATATACACAGGACCACTCTGATTCTATCAATGGCGAGCTGGACG------------
-------------------GAGAGCGGGAGTTGACGCATGTGAACTGAATGAATCTGCATGCAGGTCTGCGGCGGTGCGG
CAAGAGCTGCCGGCTGCGGTGGCTGAACTACCTCCGGCCGAACATCAAGCGGGGCAACATCTCCGACGACGAGGAGGAGC
TCATCGTCAGGCTCCACGGCCTGCTCGGCAACAGGTGGTCCATCATCGCCGGCAGGCTGCCCGGCCGAACAGACAACGAA
ATCAAGAACTACTGGAACAGCACGCTCGGCAGGAAGGCGCTCCCCGCCCGCCCCGCCATTGCCGCGGCGAGGACCA---T
CGCCACGCCCGTCGCCTCCGGCTCCTCCAGCTCCACCGCAGGAAACGCAGCTGTGGCGCTG------TCCACCTCCGTCC
CTGCTGTCCTCC---ACGCTGCGGCGCCTTCGTCGCCGACCGCCGCGGTGTGGGCGCCCAAGCCCGTGAGGTGCACGGGC
GGCCTCTTCTTCCGCCGGGAG------ACGCCGCCA---CCCGCGCCGGTCGTCGCGGAGACGCGGGCCGGGGGAG---A
AGAGGGAGATGCCTGCAGCGGCAGCT---GCTCGGAGACGTCGTCGGCCGAGCCGTGCTCGTCGGGGTCGGGCGGGGGAG
ACTGGATGGACGACGTGAGAGCCTTGGCCTCGTTCCTCGAGTCCGACGAGGAATGGC------TCAAGTCCCTGCACATG
GCCGGTTAA-----------------------------------------------------------------------
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>chr7A_1250
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-----------------------------------------------------------TGCAGGTCTGCGGCGGTGCGG
CAAGAGCTGCCGGCTGCGGTGGCTGAACTACCTCCGGCCGAACATCAAGCGGGGCAACATCTCCGACGACGAGGAGGAGC
TCATCGTCAGGCTCCACGGCCTGCTTGGCAATAGGTGGTCCATCATCGCCGGCAGGCTGCCCGGCCGAACAGATAACGAA
ATCAAGAACTACTGGAACAGCACGCTCGGCAGGAAGGCGCTCCCCGCCCGCCCCACCATTGCCGCGGCGAGGACCGTCGT
CGCCACGCCCGTCGCCTCCGGCTCCTCCAGCTCCACGGGGAGCGCCGCGGC---GCCGCTG------TCCACCTCCGTCC
CTGCCCTCCTCC---ACGCCGCGGCACCTTCGTCGCCGGCCGCCGCGGTGTGGGCGCCCAAGCCCGTGAGGTGCACGGGC
GGCCTCTTCTTCCGCCGGGAGCAGGAGACGCCGCCG---CCCGCGCCGGTCGTAGAGGAGACGCGGGCCGGGGGAG---A
AGAGGGAGATGCCTGCAGCGGCAGCAGCAGCTCGGAGACGTCGTCGGCCGAGCCGTGCTCGTCGGGGTCGGGCGGGGGAG
ACTGGATGGACGACGTGAGAGCCT-GGCGTCATTCCTCGAGTCCGACGAGGAATGGC------TCAAGTCCCTGCACATG
GCCGGTTAA-----------------------------------------------------------------------
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>chr7D_1271
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CAAGAGCTGCCGGCTGCGGTGGCTGAACTACCTCCGGCCGAACATCAAGCGGGGCAACATCTCCGACGACGAGGAGGAGC
TCATCGTCAGGCTCCACGGCCTGCTCGGCAACAGGTGGTCCATCATCGCCGGCAGGCTGCCCGGCCGAACAGACAACGAA
ATCAAGAACTACTGGAACAGCACGCTCGGCAGGAAGGCGCTCCCCGCCCGCCCCGCCATTGCCGCGGCGAGGAC------
---------CGTCGCCTCCGGCTCCTCCAGCTCCACGGGGAGCGCCGCGGC---GGCGCTG------TCTACCTCCGTCC
CTGCCGTCCTCC---ATGGCGCGGCGCCTTCGTCGCCGGCCGGCGCGGTGTGGGCGCCCAAGCCCGTGAGGTGCACGGGC
GGCCTCTTCTTCCGCAGGGAGCAGGAGACGCCGCCG---CCCGCGCCGGTCGTCGAGGAGACGCGGGCCGGAGGAGATCA
AGAGGGAGACGCCTGCAGCGGCAGCA---GCTCGGAGACGTCGTCGGCCGAGCCGTGCTCGTCGGGGTCGGGCGGCGGAG
ACTGGATGGACGACGTGAGAGCCCTGGCGTCGTTCCTGGAGTCCGACGAGGAATGGC------TCAAGTCCCTGCACATG
GCCGGTTAA-----------------------------------------------------------------------
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------------------------------------------------------------------------------
>SNPs
SSSSS-SSS-SSSSSSSSSSS-SS-SSS-SSSSSS-SSS-S--S--SS-S-SSSSS-S-SS-SSSSSSSSSSSSSSSS-S
SSSSSSSSSSSSS--SSSSSSSS--SSSS-S-SSSS-S-SSS-SSSS-SSS-SS-SSSSSSSSSSSSS-SSSSSS-S-S-
SS-S-SSS-SS-S-SS-SSSSSSSSSSSS-S-SSSSSSSSS--SSSSSSS--SSS-SS--SSS-SSS-SSSSSSSS-SSS
SSSSS---SSSSSS-S--SSSSSSSSSSSS-SS-S-SSS-SS-S-SSS--SSSSSSSSS-SSS-SSS-SSSS-SS-SSSS
S-SSSSSS-S-SSSSSSS-S-S-SS--SSSSSS-S--SSSSSSS-SSS-----------------------S--------
---------S-S--------------------------------------------------------------------
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------------------------------S-------------------------------------------------
--------------------------------------------------------------------------------
--------------------S----S---------------------SS-----------------S---S--------S
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SS---------S------S---------S---------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S----------------------------S--
-S---------S----------------------S-------S------------------------SSS----------
------------SS---------------------------------------------------S--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------SSS------------------S----------------------
-----------------------------------S--------------------------------------------
--------------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
---------------------------SSSS--------S-------------------------------S--------
-----------S--------------------------------------------------------------------
---------------------------------------------------------------SSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------S--S--SSSSS-----------------
--S---------------------------SSSSSSSSSSS---------------------------------------
--------------------------------------------------------------------------------
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------------S--SS-SS----S-SS-S---S--SSSSSS-------SS-SSSSS---SSSS-S-SSSSSSSS-SS-S
SSSS-SSSSSSSSSSS-SSSS-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S------------S-S-----------------SSS
>forward_367
--------------------------------------------------------------------------------
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---------------------------GCCCATATTGTGAGCGCTTG---------------------------------
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>reverse_4429
--------------------------------------------------------------------------------
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----------------------------GCGTGTACGTAGGTTGGCTT--------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
