>input_sequence_67055
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--------------------------------------------------ATGGCTGCCGCTATAGATCTGTCCGGGGAG
GATCTGGTGAGAGCACTCGAGCCTTTTATCCGAGAAGCCTCTGCCCCCCCTCCACTCCACTCCCACCTTAGTCCCACCTC
GCCATT--------------------------------------------------------------------------
-----------CTCCTTCCCCCACGCCGCCTACAGTGGGTACCCGTACGGGGTGCAGGCACAGGCCCAGACCGAGCTCAG
CCCGGCCCAGATGCACTACATCCAGGCACGCCTCCACCTCCAGCGCCAGACCGGCCAGCCGGGCCACCTCGGCCCGCGGC
CCCAGCCCATGAAGCCCGCTTCGGTGGCAGCGGCGACCCCGCCGCGGCCGCAGAAGCTCTACCGTGGCGTGCGGCAGCGC
CACTGGGGCAAGTGGGTGGCGGAGATCCGCCTCCCCCGCAACCGCACCCGCCTCTGGCTCGGCACCTTCGACACCGCCGA
GGAGGCGGCCCTCGCCTACGACCAGGCCGCCTACCGCCTCCGTGGCGACGCAGCGCGGCTCAACTTCCCCGACAACGCCG
CCTCCCGCGGCCCGCTCCATGCCTCCGTTGATGCCAAGCTCCAGACCCTCTGCCAGAACATCACCGCCTCCAAGAACGGC
AAGAAGTCCGCCTCCGTCTCCGCGTCCACCGCCGCAGCCACGTCGTCCACCCCCACCAGCAACTGCTCCTCGCCGTCCTC
CGACGAGGCGTCGTCCTCGCTGGAGTCCGCGGAGTCGTCACCGTCACCCGCCACCACCACCGCAGCAGAGGTTCCAGAGA
TGCAGCAGCTCGACTTCAGCGAGGCGCCATGGGACGAGGCAGCCTGCTTCGCCCTCACCAAGTACCCGTCGTACGAGATC
GACTGGGACTCGCTTCTCGCCACCAATTAG--------------------------------------------------
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>chr5D_1_TraesCS5D01G200900
CGAGCGATTCACGGAACTGGCGCGCAACCTCCGCGCGAGCCGTTTGCCACTTGCAGCGGCCGAGGCAGCGATTCCTGCGG
AATATTCGCGGCACCGGCGAAGCTGACCGGCGTCGAGCAGCAGACACCAGAAAGTCTCCACCAAGGCCTCGCCACGGCGG
CCACACCGGCGACACCCGGTTCCTCTCCCCCACACGTGTCGGTGCGCAGGACACCTGGCGTCGTCCCACTGGCGGAGCTC
CGCTGCTCGACGCGGTTTTCCCCCAGCACATCCGATCGAGCATTTAATGAATGCCTGTGCATCTGCCCGCTGTCCCACAT
GACAGTCGCGCAGAGGGGGGAGGAGTGGGAGCGAAGCAAACCACTAATCACAGCCCTAAACAACCGCGAGAGGACGGAAA
AGGGGCAATAATTAATCGGGAGAGGATAAACTATGGGTCACCAAGTCGCGGGCTGCCCAGGGGCCGCCCGCGCTATAAAG
GAGCTGCTTGGCCCTCCAGTCCTCCTCCCCGCCTCCATTTCGCCCACTCCGACCTTCGTCCACACACCTTCCACCAGCCA
CCAGCCACCGAAAAAGCCCCAATCCCAGCAACCACAAACCACTCACGTGAGTTCAAGCGAGGTAAGCATAGATCCGAGCG
AGTTCTTGCGTCGCCAAGGTAAGGTTCTTTGAATCCCAAGCCCTCTTCCTCCCT--CCCCTGTTCGTCTCCTTGTTCACG
CGGCAGGCAGCGAGTTCTCCAGGACGTTTTAGATCCCGGGGCTCCAGATCTGTTCTTTTTTCTTCTCTTTTAGCTGTAGT
AATCGGCCAGGCGAGGTTCTTTTTCCACACCTCCTTGCTCGTTGTGTCTAGATCTACCACCAACGCCATCTCTTTTTGCC
GTGGCTGTTG------TTGATTTTCTCTGCCTGTTCTAGGTTTTGGTTTGGAAACCAGGCAGATTTCTTTCTTGTTCATC
TTTCCAAGAAAACAAAAAT--CCAAAAAAAAGTTCTTCCTAGTTCCTTAGATGGCTGCCGCTATAGATCTGTCCGGGGAG
GATCTGGTGAGAGCACTCGAGCCTTTTATCCGAGAAGCCTCTGCCCCCCCTCCACTCCACTCCCACCTTAGTCCCACCTC
GCCATT--------------------------------------------------------------------------
-----------CTCCTTCCCCCACGCCGCCTACAGTGGGTACCCGTACGGGGTGCAGGCACAGGCCCAGACCGAGCTCAG
CCCGGCCCAGATGCACTACATCCAGGCACGCCTCCACCTCCAGCGCCAGACCGGCCAGCCGGGCCACCTCGGCCCGCGGC
CCCAGCCCATGAAGCCCGCTTCGGTGGCAGCGGCGACCCCGCCGCGGCCGCAGAAGCTCTACCGTGGCGTGCGGCAGCGC
CACTGGGGCAAGTGGGTGGCGGAGATCCGCCTCCCCCGCAACCGCACCCGCCTCTGGCTCGGCACCTTCGACACCGCCGA
GGAGGCGGCCCTCGCCTACGACCAGGCCGCCTACCGCCTCCGTGGCGACGCAGCGCGGCTCAACTTCCCCGACAACGCCG
CCTCCCGCGGCCCGCTCCATGCCTCCGTTGATGCCAAGCTCCAGACCCTCTGCCAGAACATCACCGCCTCCAAGAACGGC
AAGAAGTCCGCCTCCGTCTCCGCGTCCACCGCCGCAGCCACGTCGTCCACCCCCACCAGCAACTGCTCCTCGCCGTCCTC
CGACGAGGCGTCGTCCTCGCTGGAGTCCGCGGAGTCGTCACCGTCACCCGCCACCACCACCGCAGCAGAGGTTCCAGAGA
TGCAGCAGCTCGACTTCAGCGAGGCGCCATGGGACGAGGCAGCCTGCTTCGCCCTCACCAAGTACCCGTCGTACGAGATC
GACTGGGACTCGCTTCTCGCCACCAATTAGCACCCAGTTTGTGTTCGTCAGCTACTACTACTACCGTCTTTAGCGTTTCA
TGATGCTAGGTTAATGGGTCGCCGCGATGCAGATGGCATTTTAGACATTCTGCACGGGCTTTTAGCGGATTAGCTCTAAG
TCTCTAATCCTTGTTCATTGTGTAGATCTATTATTTGTTCTCTTTGTGGGTAGGGTTTGGTTAGTCCGTCCCGGATGACT
ATAAGCCGGCGTTTTTGTGCCCGGCGTCTCCGGTGGTCGGTCACTGGTCAGTGACTCCGGCCGGTGAAGTCTCTGTGTCC
ATGGTTCTAGCTAGGTGCTGTTCCTTCCGCTGCTCTGCAGATTGTAACAGTGGGAGTCTGTC-ATGTAAAATTAGCTCGT
AAAAAATCGTGTAATGTGGAATATTATTTTGTTGTTAATGTTCGTTTTGTCTTGTAAATTCATGAAGGCATG----TTTT
TGTGCTGTAAATTTCTTGAAATGTCAGTTTGCGAAATGGAACTAGTGGTAGTGAACGTAACTAGTGGTAG----------
---TACATGCGCAGATACTGTGTTTTCAGCCTTGCAATAGATGGTTCA---TAGTTTTTGGTCGAGAAATGCATGTTGGG
CTTGGACGCCTGGTGACCAAACTTGTACCCGTGGTCACGTCTATTGTGCTCGATCACGGTTGCTTGAGAAACCATCTCAC
TTCGTTTTCGGTCAAGGTAGAAGAAGCAAAAAGGAAAAAGCGGAACTCATCCACGTCGTGGGTTATTATTCCGATACGTA
TTTCCTAACAAATGGAGTA------------------------------GGTCGAACGGATCGCGCCGGGCTGGACATTA
GCTGGCAGG----AAGCTTCGCGACGCGATATTTTTAGGAGTATTTGTAGGCAAATTTCACGCTCCTCGAAGCAGACGGG
TCCGACGACGACGTGATCCCC-TTTGTCACCTACCGGAGCGCCGTTGCATTGTTGCCATGCTGAACTGATGATGCGTCCA
T------CCCATCGTTTTCGTGGCGACTGCCCGCGCGTTCCAGAAATGCCCA
>chr5B_1
CGAGCTATTCACGGAACTGGCGCGCAACCTCCGCGCGAGCCGTTTGCCACTTGCAGTGGCTGAGGCAGCGATTCCTGCGG
AATATTCGCGGCCTCGGCGAAGCTGACCGGCGTCGAGCAGCAGACACCAGAAAACCTCCACCAAGACCTCGCCACGGCGG
CCACACCGGCAACACCCGGTTCCTCACCCCCACACGTGTCGGTGAGGAGGACACCTGGCGTCCTCCTAGTGGCGGAGCTC
CGCTGCTCGACGCGGTTTTCCCCCACCCCATCCGATCGAGCATTTAATGAATGCCTGTGCATCTGCCCGCTGTCCCACAT
GACAGTAGCGCAGA-GGGGGAGGAGTGGGAGCGAAGCAAACCACTAATCACAGCCCTAAACAACCGGGAGAGGACGGAAA
AGGGGCAATAATTAATCGGGAGAGGATAAACTATGGGTCACGAAGTCGCGGGCTGCCCAGGGGCCGCCCGCGCTATAAAG
GAGCTGCTTGGCCCTCCAGTCCTCCTCCCCGCCTCCATTTCGCCCACTCCGACCTTCGTCCACACACATTCCACCAGCCA
CCACCCGCCGAAAAAGCCCCAATCCCAGCAAACCACAAACACTCACGTGAGTTCGAGCGAGGTAAGCATAGATCCGAGCG
AGTTCTTGCGTCGCCAAGGTAAGGTTCTCCGAGTCTCAAGCCCTCTTCCTCCCGCCCCCCTATTCGTCTCCTTGTTCACC
CGGCAGGCAGCGAGGTCTCCAGGACGTTTTAGATCCCGGGGCTCCAGATCTGTTCTTTTTTCTTCTCTTTTAGTTGTAGT
AATCGGCCAGGCGAGGTTCTTTTTCCACACCTCCTTGCTCGTTGTGTCTAGATCTACCACCAACGCCATCTCTTTTTGCC
GTGGCTGTTGACCTTGTTGATTTTCTCTGCCTGTTCTAGGTTTTGGTTTGGAAACCAGGCAGATTTCTTTCTTGTTCATC
TTTCTAAGAAAACAAAAATCCCCAAAAAAAAGTTCGTCCTAGTTCCTTAGATGGCTGCAGCTATAGATCTGTCCGGGGAG
GATCTGGTGAGAGCACTCGAGCCTTTTATCCGAGAAGCCTCTGCCCCCCTTCCACTCCACTCCCATCTTAGTCCCACCTC
GCCATT--------------------------------------------------------------------------
-----------CTCCTTCCCCCACGCCGCCTACAGTGGGTACCCGTACGGGGTGCAGGCACAGGCCCAGACCGAGCTCAG
CCCGGCCCAGATGCACTACATCCAGGCACGCCTCCACCTCCAGCGCCAGACTGGCCAGCCGGGCCAGCTCGGACCGCGGT
CCCAGCCCATGAAGCCCGCTTCGGTGGCAGCGGCGACCCCGCCGCGGCCGCAGAAGCTCTACCGTGGCGTGCGGCAGCGC
CACTGGGGCAAGTGGGTGGCGGAGATCCGTCTCCCCCGCAACCGCACCCGCCTCTGGCTCGGCACCTTCGACACCGCCGA
GGAGGCGGCCCTCGCCTACGACCAGGCCGCCTACCGCCTCCGCGGCGATGCAGCTCGCCTCAACTTCCCCGACAACGCCG
CCTCTCGCGGCCCGCTCCATGCCTCCGTTGACGCCAAGCTCCAGACCCTCTGCCAGAACATCACCGCCTCCAAGAACGCC
AAGAAGTCCGCCTCTGTCTCCGCGTCCACCGCCGCAGCCACGTCGTCCACCCCCACCAGCAACTGCTCCTCGCCTTCCTC
CGACGAGGCGTCATCCTCGCTGGAGTCTGCGGAGTCGTCACCGTCACCCGCCGCCACCACCGCAGCAGATGTTCCAGAGA
TGCAGCAGCTCGACTTCAGCGAGGCGCCATGGGACGAGGCAGCCTGCTTCGCCCTCACCAAGTACCCGTCGTATGAGATC
GACTGGGATTCGCTTCTCGCCACCAATTAGCACCCAGTTTGTGTCCGTCAGCTACTATTACTACCGTCTTTAGCGTGTCA
TGATGCTAGGTTAATGG-TCGCCTCGATGCAGATGGCATTTTAGACATTCTGCACGGGCTTTTAGCGGATTAGCTCTAAG
TCTCTAATCCTTGTTCATTGTGTAGATCTATTATTTGTTCTCTTGT--GGTAGGGTTTGGTTAGTCCGTCCCGGATGACT
ATAAGCCGGCGTTTTTGTGCCCGGCGTCTCCGGTGGTCGGTCACTGGTCAGTGACTCCGGCCGGTGAAGTC--TGTGTCC
ATGGTTCTAGCTAGTTGCTGTTCCTTCCGCTGCTCTGCAGATTGTAACAGTGGGAGTCTGTC-ATGTATAATTATCTCGT
CAAAAATCCTGTAATGTGGAATATTATTTTGTTGTTAATGTTCGTTTTGTCTTGTAAACTCATGAAAGGCAT-CGTTTTT
TTTCTTGTAAAATTCTTGAAATGTCAGATTGCGAAATGGAACTAG--GTAGTGAACGTGACTGTAATTCTTAAGTACTAC
TCCTACATGTGCATATACTGTGTTTCCAGACTTGCAATGGATAGTTTATACTAGTTTTTGGTCGAGAAATGCAGGTTGGG
CTTGGACGCCTGGTGGCCATACTTGTATCCGTGGTCACGTCTTTCGTGCTCGATCACGGTTGCTTGAGAAACCATCTCAC
TTCATTTTCGGTCAAGGTAGAAGAAGCACAAAGGAAAAAGGGGAACACATCCACGTCGTGGGCT----------------
---------------AGTA------------------------------GGTCGAACGGATCGCGCCGGGCTGGACATTA
GCTGGCAGGCAGGAAGCTTCGCGAGGCGATATTTTTAGTAGTATTTGTAGGCAAATTTCACGCTCCTCGAAGCAGACGGG
TCCGACGACGACGTGATCCCCTTTTGTCACCTACCGGAGCGCCGTTGCGTTGTTGCCATGCTGAACTGATGATGCGTCCT
GTCCATACCCATCGTTTTCGTGGCGATTGCTCGCGCGTTCCAGAAATGCCCA
>chr5A_1
CGAGCGATTCACGGAACTGGCGCGCAACCTCCGTGCGAGCCGTTTGCCACTTGCAGCGGCCGAGGCAGCGATTCCTGCGG
AATATTCGCGGCCCCGGCGAAGCTGACCGGCGTCGAGCAGCGGACACCAGAAAGCCTCCACCAAGG-CTCGCCACGGCGG
CCACACCGGCGACACCCGGTTCCTCAGCCCCACAGGTGTCGGTTTGCAGGACACCTGGCGTCCTCCCAGTGGCGGAGCCC
CGCTGCTCGACGCGGTTTTCCCC-AGCACATCCGATCGGGCATTTAATGCCTGCCTGTGCATCTGCCCGGTGTCCCACAT
GACAGTCGCGCGGAGGGGGGAGGAGTGGGAGCGAAGCAAACCACTAATCACAGCCCTAAACAACCGCGAGAGGATGGAAA
AGGGGCAATAATTAATCGGGAGAGGATAAACCATGGGTCACGAAGTTGCGGGCTGCCCAGGGGCCGCCCGCGCTATAAAG
GAGCTGCTTGGCCCTCCAGTCCTCCTCCCCGCCTCCATTTCGCCCACTCCGACCTTCGTCCACACACCTTCCACCAGCCA
CC-------GAAAAAGCCCCAATCCCAGCAACCACAAACCACTCACGTGAGTTCGAGCGAGGTAAGAATAGATCCGAGCG
AGTTCTTGCGTCGCCAAGGTAAAGTTCTTTGAATCCCAAGCCCTCTTCCCCCCT--CCCTTGTTCGTCTCCTTGTTCACT
CGGCAGGCAGCGAGGTCTCCAGGACGTTTTAGATCCAGGGGCTCCAGATCTGTTCGTTTTTCTTCTCTTTTAGTTGTAGT
AATCGGCCAGGCGAGGTTCTTTTTCCACACCTCCTTGCTCGTTGTGTCTAGATCTACCACAAACGCCATCTCTTTTTGCC
GTGGCTGTTG------TTGATTTTCTCTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNCTCCTTCCCCCACGCTGCTTACAGTGGGTACCCGTACGGGGTGCAGGCACAGGCCCAGACCGAGCTCAG
CTCGGCCCAGATGCACTACATCCAGGCACGCCTCCACCTCCAGCGCCAGACCGGCCAGCCGGGCCACCTCGGCCCGCGGC
CCCAGCCCATGAAGCCTGCTTCGGTGGCAGCGGCGACCCCGCCGCGGCCGCAGAAGCTCTACCGTGGCGTGCGGCAGCGC
CACTGGGGCAAGTGGGTGGCGGAGATCCGCCTCCCCCGCAACCGCACCCGCCTCTGGCTCGGCACCTTCGACACCGCCGA
GGAGGCGGCCCTCGCCTACGACCAGGCAGCCTACCGCCTCCGCGGCGACGCAGCGCGCCTCAACTTCCCCGACAACGCTG
CCTCCCGCGGCCCGCTCCATGCCTCCGTTGACGCCAAGCTCCAGACCCTCTGCCAGAACATCACCGCCTCCAAGAACGCC
AAGAAGTCCGCCTCCGTCTCCGCGTCCACCGCCGCAGCCACGTCGTCCACCCCCACCAGCAACTGCTCCTCGCCGTCCTC
CGACGAGGCGTCGTCCTCGCTGGAGTCCGCGGAGTCGTCACCGTCACCCGCCGCCACCACCGCAGCAGAGGTTCCAGAGA
TGCAGCAGCTCGACTTCAGCGAGGCGCCATGGGATGAGGCAGCCTGCTTCGCCCTCACCAAGTACCCGTCGTACGAGATC
GACTGGGACTCGCTTCTCGCCGCCAATTAGCACCCAGTTTGTGTTCGTCAGCTAC---TACTACTGTCTTTAGCGTGTCA
TGATGTTAGGTTAATGGGTCGCCGCGATGCAGATGGCATTTTAGACATTCTGCACGGGCTTTTAGCGGATTAGCTCTAAG
TCTCTAATCCTTGTTCATTGTGTAGATCTATTATTTGTTCTCTTGT--GGTAGGGTTTGGTTAGTCCGTCCCGGATGACT
ATAAGCCGGCGTTTTTGTGCCCGGCGTCTCCGGTGGTCGGTCACTGGTCAGTGACTCCGGCCGGTGAAGTCT-TGTGTCC
ATGGTTCTAGCTAGGTGCTGTTCCTTCCGCTGCTCTGCAGATTGTAACAGTGGGAGTCTTGTTATGTAAAATTAGCTCGT
CAAAAATCATGTAATGTGGAATATTATTTTGTTGTTAATGGTTGTTTTGTCTTGTAAATTCATGAAAATCATACGTTTTT
TGTCTTGTGAAATTCTTGAAATGTCAGTCTGCGAAATGGAACTAGTGGTAGTGAACGTGACTGTAATTCTTTAGTACTAC
------ATGCGCAGATACTGTGTTT-CAGACTTGCAATCGATAGTTTA---TAGTTTTAGCTCGGGAAATTCATGTTTGG
CTTGGACGCCTGGCGACCAAACTTGTATCCGTGTTCACGTCTTTTGTGCTCGATCACGGTTGCTTGAGGAACCATCTCAC
TTCATTTTCAGTCAGGGTAGAAGAAGCAAAAAGGAAAAAGGGGAACACATCCACATCGTGGGCT----------------
---------------ATTATTCCGATACGTATTTCCTAACAATGGAGTAGGTCGAACGGATCGCGCTGGGCTGGACGTTA
GCTGGCAGG----AAGCTTCTCGAGGCGATATTTTTAGTAGTATTTGTAGGCAAATTTCACGCTCCTCGAAGCAGACGGG
TCCGACGACGACGTGATCCCC-TTTGTCACCTACCGGAGCGCCGTTGCATTGCTGCCATGCTGAACTGATGATGCGTCCG
TC-----CCCATCGTTTTCGTGGCGATCGCGCGCGCGTTCCAGAAATGCCCA
>SNPs
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------------S-----------------------------------------S-------------------------
-------------------------S------------------S-----------------S-----S-----------
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-----------------------------------------S--------------------------------------
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---S--S-----------------------------------------------S-------------------------
-------------------------------------------------------------------------------S
--------------S----------------------------------------------------------S------
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----S------------------------------S----------------------S---------------------
-------------------------------------------------S---------------S--------------
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------------------------------------------S--------------S----------------------
-------------------------------S----------------------------------------------S-
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----------------------------------------------------S---------------------------
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---------------------------------------------------------S------------------S---
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--------------------------------------------SSSS--------------------------------
------------------------------------------------------------------------S-------
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S-------S---------------------------------------------------------S-SSSS--------
---SS------S----------------------------------------------S---SSSSS-SS----------
-------------------------S---S--------S---S---S---------------------------------
---------------------------S--------------S-------------------------------------
---S------------------------------------S-----S---------------S-SSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSS-----------------------------------------------------------------
------------------------S-------------S-----------------------------------------
-------------------------------------------------------------------------------S
--------------------------S---S---------------------
>forward_135
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-----------------------------------AGCAGCAGACACCAGAAAGT-------------------------
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>reverse_1019
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----------------------------------------------------------CGCTATAGATCTGTCCGGGG--
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>forward_720
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-----------------------------------------------------------CTGTTCGTCTCCTTGTTCACG
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>reverse_2128
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-----------------------------------------------GGGTAGGGTTTGGTTAGTCCG------------
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