>input_sequence_67035
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-------------------------------------------------------ATGGGAAGCAAGGGCCTCAAGGGTG
TGATGGTGTGTTTACTCATACTGGGGTTGGTTCTGGAACAGGTGCAAGTAGAAGGCAAGAGTTGCTGCAGGACCACCCTG
GGAAGAAACTGCTACAACCTTTGCCGCTCCCGTGGTGCTCAGAAGTTATGCTCAACCGTCTGTAGGTGTAAACTCACAAG
TGGCCTAAGCTGCCCCAAAGGTTTCCCTAAATTGGCCCTTGAGTCCAACTCAGGTAAAGAGAATGAACTCCTTCTATTTT
ATATACTCCCTCTTTTTTTTAAAAAAATAGAATAGATGTCATTC-GATAAGCATATAGTCAAGTTAAAATT-TTCCTAGT
TTTGTTACTAATATGATAAAGTATTTCAAATATGTTAGATGGCGTTAGATGATCAGATTTGCCATGAATAATTTTCCACA
AGTTTTTTTCTTCATAATTTTCTACCAACAAGTAATTGTGAAAAATAACTAACAAAGAATGAATGATAGAGACCATGTGA
ATATCCAAAACATCAA-------GCATATTGTAACTGGGGAATTATTTGTTTCAGAAAGGATTTTATTTACACGCTAGAT
ATTTTAATTTGACAGATGAACCAGACACCATTGAGTATTGCAACTTGGGATGTAGGTCTTCCGTGTGTGACTACATGGTC
AACGCAGGTAAAGAAATTTCATCTTG---TATTTGTATTCC---------TGTAAACTAATTGATGAAAAAGGCTAGTTC
TTGACACATAATATGTTATTTGGGCACCAGCTGCTGACGA---TGAAGAGATGAAACTCTATGTGGAAAATTGTGGCGAT
GCTTGTGTCAATTTCTGTAACGGTGATGCTGGCCTCACTTCCCTTGATGCGTAA--------------------------
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>chr1D_1_TraesCS1D01G405700
TCTTAGATACCTTAGTTTGTGCTTTGCTTGGCCTTCGAGAGGGTTCTGGATCCACCACAGGTGCTTAGATAAGGTGCTAA
GTGCATCAAATAACTTATAAACTAAATTCCCCAATGCATGCATAGGTGCTTAGCCTTTTGTACCTAAGCTTCCTTCAATT
AATTGTTTAGCAACAAAAATCCCTCATGCATATGTGTTTTGCATAGATTTGCTCACTTGACATCGTTTCTTCATCGGGTC
TCGATGCTCTCTCTTTTTCTTAATTTCTTTGCTACGTTAACTTTTTTGCCTATGTGACATTCTTAGCATCATGGAGCGCT
GAGAAAAGCCTAAAGAACATGAGGACAAGAACTAGCTAACTGCCAAAAGTTTTTGTTTT--GAGGGATGCGCTTGCATTA
CCAACCCCTAAGCGACATACCATGTGAACTGTGGGCGCGGATGGATTGATACAAACATGTTTGCTTGCACGTATTCCACA
ACCATCATCTTTATCATCCATGCACGATTTCAACCAAATTTCTCTTGGGATGGATGACAACCATAAGGTTGCC--TTTTG
CCG--TGCCGCGCGTGATTAAAGACACTTTTGTTGTCATTGCCGGAGTCGGCTCCTTGGCAAGGCAAGAAAGACAAGGTC
CAATATTTGTCCATAAGCTCTTAAAAAAC--TCATGTTTAAGGAGTGATATGCAACTAGAAATTGATTTGTCGCTGTTGC
GTGTGGTTAAACATTGCCAGTGGAGTTTGGAAGAAGAGTAGCCCTCCAAACACACTCACAGTTAGGAGCTTTTGTTTTCA
TCCGGTTTACATGGCTGGCACGATTTTGCAAA-------AAAATAAATACATGGCTGGCATGAACACGCAACATTTACAT
ACAACAACCATCACGTGAACATCCCACATGCCGCAACCACCATCTCCTATAACTAGGAGCCATCCAAGCCTAGTCTCAGT
AATCCATCAACCAAAGCCATTATACTTCTTTGTTCTGCAAGATAGCCTGCCAGCCATGGGAAGCAAGGGCCTCAAGGGTG
TGATGGTGTGTTTACTCATACTGGGGTTGGTTCTGGAACAGGTGCAAGTAGAAGGCAAGAGTTGCTGCAGGACCACCCTG
GGAAGAAACTGCTACAACCTTTGCCGCTCCCGTGGTGCTCAGAAGTTATGCTCAACCGTCTGTAGGTGTAAACTCACAAG
TGGCCTAAGCTGCCCCAAAGGTTTCCCTAAATTGGCCCTTGAGTCCAACTCAGGTAAAGAGAATGAACTCCTTCTATTTT
ATATACTCCCTCTTTTTTTTAAAAAAATAGAATAGATGTCATTC-GATAAGCATATAGTCAAGTTAAAATT-TTCCTAGT
TTTGTTACTAATATGATAAAGTATTTCAAATATGTTAGATGGCGTTAGATGATCAGATTTGCCATGAATAATTTTCCACA
AGTTTTTTTCTTCATAATTTTCTACCAACAAGTAATTGTGAAAAATAACTAACAAAGAATGAATGATAGAGACCATGTGA
ATATCCAAAACATCAA-------GCATATTGTAACTGGGGAATTATTTGTTTCAGAAAGGATTTTATTTACACGCTAGAT
ATTTTAATTTGACAGATGAACCAGACACCATTGAGTATTGCAACTTGGGATGTAGGTCTTCCGTGTGTGACTACATGGTC
AACGCAGGTAAAGAAATTTCATCTTG---TATTTGTATTCC---------TGTAAACTAATTGATGAAAAAGGCTAGTTC
TTGACACATAATATGTTATTTGGGCACCAGCTGCTGACGA---TGAAGAGATGAAACTCTATGTGGAAAATTGTGGCGAT
GCTTGTGTCAATTTCTGTAACGGTGATGCTGGCCTCACTTCCCTTGATGCGTAATGATGCGTATCCATGGTCTGAGATTT
CACAGGGCAAGGTCGTGTCTCACCTTTGCGTTCAATAAAATTGGATCCCATCGAGAGTATCCAAACCAGTGTGTCACTCT
GTTTTATGTGTGTGTATTTCCATTCCTTGTTCGAAATAAAAGCCATCATGATGGATGCCA--------TGTTGCTGCCCT
GATGTACTACCATGACTGAGATATAATGGTATATGTTGTATCATTTGCCTGTGGATATGAACTCCGTCTGGGAGGCGCCA
GTGCTGCGCGGCGGTGGTTGCTCGTGCGCCGGCTCGAAGGGCTCAGATCGGGGCGGCGCCCGATCTGCTGCTCCGTCTTT
GGAGGTGACCTCTTGGGGTCGGTGACGGCACAGCTGCACTTTTCCCTCTACGGGACGGC-----------GATGGGTGTG
GCAGTGCGGCGCGTGGCGAATGGTAGCACAGTGGTGGTGTTGGTAGGCGTCGTTGGCGTGCTTTGGTCGCGGTTGCACGG
GCAGCAGACTAGAGCGTTAGTTGGCGGCGAGGTTGGCCTCCGTCGACAGCGCGGATGCGAGGCGGTTGCTGCATTGTGGC
TTCAAGAGTCCTCGTAGTAGTGGTGGTGGTGGTGTCAACACCTATGCAGGCAGCCCTTCATGGTGTTGTGGAGGCCGGGG
CGTTTCTTTTTTCCTTCTGGTTTGGTTCGTCGATGTTGATGTTTGCAGGGGCCTGGCCCCTACCTTGCTGGAATTTTATC
TATTTATGGGCCTAGCCCAGTAATAATTTCAGA-----------------------------------------------
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-----------------------------AATTCCTAATAAATCCTAAAGGCCCATTTAGCCCATTCGTGCAAGGCAAGG
GACACTACTAAAGTTTAGCCCCACATTGCCAGTTTAGAGGGAGTTGGACCTCTTTATGAGGGAGGTTCTTTCCCCATTTG
TATGAGTATGAGAACAAGAGGGACATCCACGCGCGCTCCTCCTCCGTCGCCCGCCACGCCTCGCCACGGGTTGCGGGAAT
GAGCCAATGTCTAAATTTTTGCCACGCAC---------------------------------------------------
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>chr1B_1
TCTTAGATACCTTAGTTTGTGCTTTGCTCGGCCTTCGAGAGGTTTCTGGATCCACCAAAGGTGATTAGATAAGGTGCTAA
GTGCATCAAAGAATTTATAAACTAAACTCCCCAATGCATGCATAGGTGCTTAGCCTATTGTAGCTAAGTTTCCTTCATTT
GATTGTTTAGCAACAAAAATTCCTCATGC-TATGTGTTTTGCATAGATTTGCTCGCTT-ACATCATTTCTTCCTCGGGTC
TCGATTCTCCCTGTTTTTCTTAATTTCTTTGCTATGTCAACTTTTT-GCCTACGTGGCATTCTTAGCATCATGGAGCGCT
GAGAAAAGCCTAAAGCACATGAAGACAAGAACTAGCTAACTGCCAAAAAATTTTGTTTCGAGAGGGATGCGCTTGCATTA
CCAACCCGTAAGTGACATACCATGTGAACTGTGGGCGCGGATGGATTGATACAAACATGTTCGCTTCCACGTATTCCATA
ACCATCATCTTTATCATCCACACACGATTTCAATCAAATTTCTCTTGGGATGGATGACAACCATAAGGTTGCC--TTTTT
GCCGTTGCCACGCGTGATTAAAGACACTTTTGTTGTCATTGCCGGAGTCGGCTCCTTGGCAAGGCAAGAAAGACAAGGTG
CAATATTTGTCCATAAGCTCTTTAAAAAAAA-CATGTTTAAGGAGTGATATGCAACTAGCAATTGATCTGTCATTGTTGC
GTGTGGTTAAAGATTGCCAGTGGAGTTTGGAAGAAGATTAGCCCTCCAAACACACTCACAGTTAGGAGTTTTTGTTTTCA
TCCGCTTTACATGGCTGGCAAGATTT--CACCAAAAAAGAAAAAAAATACATGGCTGGCATGAACACGCAACATTTACAT
ACAACAACCGTCACGTGAACATCCCACATGCCACAACAACCATCTCCTATAACTATGAGCCATCCAAGCCTAGTCTCAGC
AATCCATCAACCAAATCCATCAAC-------------CAAGATAGCCTGCCAGCCATGGGAAGCAAGGGCTTCAAGGGTG
TGATAGTGTGTTTACTCATACTGGGGTTGGTTCTGGAACAGCTGCAGGTAGAAGGCAAGAGCTGCTGCAGGAGCACCCTG
GGAAGAAACTGCTACAACCTTTGCCGCGCCCGTGGTGCTCAGAAGTTATGCGCAGGCGTCTGTAGGTGTAAAATCTCAAG
TGGCCTAAGCTGCCCTAAAGGCTTCCCTAAATTGGCCCTTGAGTCCAACTCAGGTAAAGAGAATGAACTCCTTCTATTTT
ATATACTACCTCTTTTTTT----AAAATAGAATAGATGTCATTCTGATAAGCATATAGTCAAGTTAAAATT-T-CCTAGT
TTTCTTACTAATATGATAACGTATTTTGAATGTGTTAGATGGCGTTAGATGATCAGATTTGCCATGGATATTTTTCCACA
AGTT-TTTCTTTCACGATTTTCTACCAACAAGTAATAGGAAAAA-TAACTAACAAGGAACGAATGATAGAGGCCATGTGA
ATATCCA-------AA-------GCATATTGTAAGTGAGGAATTATTTGTTTCGGACAGGATTTTATTTACACGCTATAT
ATTTTAATTTGACAGATGAACCAGACACCATTGAGTACTGCAACTTGGGATGTAGGTCTTCCGTGTGTGACTACATGGTC
AACGCAGGTAAAGAAAATTCATCTTG---TATTTGCATTCC---------TGTAAACTAATTGATGAAAAAGGCTAGTTA
TTGACACATAATATGTTATTTGGGCACCAGCTGCTGACGA---TGAAGAGATGAAACTCTATGTGGAAAATTGTGCTGAT
GCTTGTGTCAGTTTCTGTAACGGTGATGCTGGCCTCCCATCCCTTGATGCGTACTGATGCGTGTCCATGGTCTGAGATTT
CACAGGGCAAGGTCGTGTCTCACCTTTGCGTTCAATAAAATTGGATCCCATCGAGAGTATCCAAACCAGTGTGTCACCCT
GTTTTATGTGTGTGTATGTCCATTCCTTGTTCGAAATAAAAGCCATCATGATGGATGCCA--------TGTTGCTGCCCT
GATGCACTACCATGACTGAGATATAATGGTGTATGTTGTATCATTTGCCTGTGGGTATAAACTCTGTCTGGGAGACCCCA
GTGCTGCGTGGCGGTGGTTGCTCGCGCGCCGGCTCAAAGGGCTCAGATCGGGGCAGCGCCTGATCTGCTGCTCCGTCTTT
GGAGGTGACCTCTTGGGGTCGGTGACGGCACAGCTGCACTTTTTCCTCTACCGGACGGCGTAGAAGCGGCGATGGGTGCG
GCAGTGCGGCGCGTGGCGAGTGGTAGCACACTGGTGTTGGTGGTGGGCGTCGTTGGTGTGCTTTGGTCGCGGCTGCACGG
GCAGCAGGCTAGATCGTTAGTTGGCGGCGAGGTTGGCATTCGTCGACAGCGCGGAGGCGAGGCGGTTGCTGCATTGTGGC
TTCAAGACTACTCGTAGTAATGGTGGTGGTGGTGCCAACACCTATGCAGGCAGCCCTCCATGGTGTTGTGGAGGCCGCGG
CGTTTCTTTT-TCCTTTTGGTTTGGTTCGCCGTTGTTGATGTTCGCAGGGGCCTGGCCCCTACCTTG-------------
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>chr1A_1
TCTTAGATACCTTAGTTTGTGCTTTGCTCGGCCTTCAAGAGGTTTCTGGATCCACCACAGGTGCTTAGATAAGGTGCTAA
GTGCATCAAAGAACTTATAAACTAAACTTCCTAATGCATGCATAGGTGCTTAGCTTTTTGTAGCTAAGTTTCCTTCATTT
AATCGTTTAGCAACAAAAATTCCTCATGCATATGTGTTCCGCATAGATTTGCTCGCTTGACATCGTTGCTTCCTTGGGTC
TGGATGCTCTCTCTTTTTCTTATTTTCTTTGTTACTTCAACTTGTT-GCCTATGTGACATTCTTAGCACTATGAAGCGCT
GAGAAAAGCCTAAAGCACATGCGGAAAAGAACTAGCTAACTGCCAAAAGTTTTTGTTTTGAG--GGATGCGCTTGCATTA
CCAACCCCTAAGTGACATACCATGTGAACTGTGGTCGCGAATAGATTGGTACGAACATGTTCGCTTGCACGTATTCCACA
ACCATCATCTTTATCATCTACACGCGATTTCAACCAAGTTTCTCTTGGGATGGATGACAACCATAAAGGTTGCCTTTTTT
GCCGTTGCCGCGCGTGATTAAAGACACTTTTGTTGTCATTGCCGGAGTGGGCACCTTAGCAAGGCAAGAAGGACAAGGTC
CAATATTTGTCCCTAAGCTCTTTAAAAAAATTCATGTTTAAGGAGTGATATGCAACTAGCAATGGATTTGTTGCTGTTGC
GTGTGGTTAAAGATTGCCAGTGGAATTTGGAAGAATAGTAGCCCTCCAAACACACTCACAGTTAGGAGCTTTTGTTTTCA
TCCGGTTTACATGGCTGGCATGATAT--CACA-------AAAAAAAATACATGGCTGACATGAACACGCAACATTTACAT
ACCACAACCATCACGTGAACATCCCACATGCCACAACCACCATCTCCTATAAGTAGGAGCCATCCAAGCCTAGTCTCAGC
AATCCATCAACCAAAGCCTG----------TGTTCTGCAAGATAGCCTGCCAGCCATGGGAAGCAAGGGCCTCAAGGGTG
TGATGGTGTGTTTACTCATACTGGGGTTGGTTCTGGAACAGGTGCAAGTAGAAGGCAAGAGTTGCTGCAAGAGCACCCTA
GGAAGAAACTGCTACAACCTTTGCCGCGCCCGTGGTGCTCAGAAGTTATGCGCAAACGTTTGCAGGTGTAAACTCACAAG
TGGCCTAAGCTGCCCTAAGGACTTCCCTAAATTGGTCCTTGAGTCCAACTCAGGTAAAGAGAATGAACTCCTTCTATTTT
ATATACTACCTCTTTTTTA----AAAATAGAACAGATGTCATTCTGATAAGCATATAGTCAAGTTAAAATTAT-CCTGGT
TTTCTTACTAATATGATGAAGTATTTTGAATATGTTAGATGGCGTTAGATGATCAGATTTGTCATGAATAATTTTCCACG
AGTT-TTTTTTTCATAATTTTCTACCAACAAGTAATTGGAAAAA-TAACTAACAAGGAACGAATGATAGAGACCATGTGA
ATATCCA-------AAACATCAAGCATATTGTAACCGGGGAATTATTTGTTTCGAACAGGATTTTATTTACACGCTAGAT
ATTTTAATTTGACAGATGAACCAGACACCATGGAGTACTGCAACTTGGGATGTAGGTCTTCCCTATGTGACTACATGGTC
AACGCAGGTAAATAAAATTCATCTTG---TATTTGCATTCC---------TGTAAACTAATTGA----AAAGGCGAGTTC
CTGACACATAACATGCTATTTGGGCACCAGCTGCTGACGA---TGAAGAGATGAAACTCTATGTGGAACAGTGTGGTGAT
GCTTGTGTCAATTTCTGTAACGCTGATGCTGGCCTCACATCCCTTGATGCGTAATGATGCGTATCCATGGTCTGAGATTT
CACAGGGCAAGGTCGTGTCTCACCTTTGCGTTCAATAAAATTGGATCCCATCGAGAGTATCCAAACCAGTGTGTCACCCT
GTGTTATGTGTGTGTATTTCCATTCCTTGTTCGAA-TAAAAGTCATCATGTTGGATGCCATGTTGCATTGTTGCTGCCCT
GATGTACTACCATGACTGAGATATAATGGTATATGTTGTATCATTTGCCTATGGATATAAACTCCGTCTGGGAGGCGCCA
GTGCTGCGTTGCGGTGGTTGCTCGCGCGTCGGCTCAAAGGGCTTAGATTGGGGCGGCGCCCGATCTGCTGCTCCGTCTTT
GGAGGTGACCTCTTGGGGTCGGTGATGGCACAGCTGCACTTCTCCCTCTACGGGACGACGTAGACGTGGCGATGGGTGTG
GCAGTGCGGCGCGTG-CGAGTGGTAGCATAGTGGTGTTGTTGGTGGGCGTCGTTGGCGTGCTTTGGT-------------
-------------------------------------------------CGCGGACGCGAGGTGGTTGCTGCATTGTGGC
TTCAAGAGTCCTCATAGTAGTGGTGGTGGTGGTGCCGACACCTATGCAGGCAGCCCTTCATGGTGTTGTGGAGGCCACGG
CGTTTCTTTTTTCCTTTTGGTTTGGTTCGTCGTTGTTGATGTTCGCAGGGGCCAGGCCCTTACCTTGGATCAGAGGTGGC
GAGGCATAAGACTCTGGGCGAAAGCCTCGTTCTTTGTCGGTGGTCGTTGCGGGTGATGTTGGCGCCCATGGGCGTCCTCC
TCCTCTTGGAGATATTGTCGAAGAGTACTTCTTCACACTGATATGTGGCTGGTCGGCGATGAGTGGTATCGGAGGCTAAT
GGCTAGGATTGATCTATCCCAATGTTTGGCAGGACGGTCATGCGCAGGTATGTGCGAAAGCTTATTGATTGGCGCGGGTC
GATGCCGGCGACGGCGGTGTCCTCGGGCATTGTCTTTCCTTCTTGAAGTCGTCTTCAAAGAACTTGCTTACTATCGCTCC
GGATTGTGGTCATGTTAGGTGGTGTTGGCATGTTTGTGTTCGTGTCGGTGTTGGTTCATGTTGGTTTTGAGCCTTGTTTT
TCTTTTAAACCGGTCAACTCTGTATTAGTTCTCTCTTAATGAAATCGATAGAGCTCCTGCCTTGCTTGTAAAAAATGGAA
GTAGTCTACAATGGTGCATTTAGTGGACGTGTAAACAAGGTAGGATTGTTCTTTGTAAAAGATAGTATTACCGGTTTTAA
AAGTTTAGAATGCAATTTTTTCTGGTTTTAAAGTTGAAGGATTAAATCTAGAGTTAAAGGACGAAAAGTATATTTTTTTC
TTAAAATTATATGATTAGTGTAGGAAAAAAAATACAAAGCTCTAGTTGAGATGTCATATAAAGCCACGTATCTGCACACG
AAAAACTTCCCGCGGCAAGCGTGATCAGCAATCTACAAATCTTGCACACCAAAAACCAACGTGACATTGGACACACGTTG
TTTGATATACATCGCCAGCTCAAACCTCAAAGGCATGCACATGTGTACAGCAAAGAGATGTGTTTCTGGCATGCACGTAT
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCATGCACGCGTGTCATTTTGA
CAAAAAATGTATTTTGTCCAAACCCCGCCCCATAGTTGCATGCTGGGACAAAATAGGACCAGCTAGAGTGAAATCGGGTT
TTAAAGTTTCAAAAAAATCTAAACAAAATGTGGTTGTGCCAGAAATACATTAGTACTTTATTGTGTGTGTGTAGTTCACG
TCAAAACGTATTTCATCGTATATATTTTTTATAGAAATGCAGTGAAAAAACGCGCAGACTTGCACGTAACATCCTACTGG
ATAGCTTCGCGCAGGTCACAGCATTGTCACCGCCGTCGTCGTCATCGGCTCCGGCCAACTTTGTCCGCGCGCCATCGATC
CAACTTTTTGCCCCGTGTGGGAGAAGAAACTATGGCCCCGGTGTGCTTTGGTTTCACTTGCAACAACCAGTACTCATCTA
CACACTCCCACGACCATCATCTCCTAGTATAAAAATCCCTACCAGGAGCCATGGAACTCACTCTAGTCTCATCTGTCCTT
CAACCAAAAGCCCCCATCAATACTTGTGCCTTCTGCAAGATAGCCCGGCAGCCATAGCCATGGGAGGAGGCCAAAAGGGT
CTGGAGACTGCGATCGTGTGCCTACTCGTGCTGGGGCTGGTCCTGGAGCAGGTGCAAGTAGAGGGCGTGGATTGCGGCGC
AAACCCCTTCAAAGTGGCCTGCTTCAATTCTTGCCTTCTCGGTCCTAGTACAGTGTTCCAGTGCGCAGATTCTGTGCTTG
TCGAGTCCCCGCTAACTTGGCCTCTGCACGCAGCTCCGGTAAAGACAGACAACTCGCTACTTCTAATTTATATACTATCT
CCTTTTCAAAGTGGATGTGGTTGTGATCCTAAAAAAGTGTAATGTCAAATTATAAAATTCCAAGTTTACCTATTAATTTA
ATAAACTATTCTGTATTTGTTAGTTGATATTTGTATGATCAGATTTGACATGAATAATGTTTCCGCTATATTAAGAAGTT
TCTACCAGAAAATAGTTGTGAAAATAGCTAATACAGAATAAATGGTAGAGGCCATGCCAATACACAAAACATCGACATAT
TGTAACTGAGGAATTGTTTATCTCGGATCTACTTCGTTTTGGCAGATGAACCAAACGCCATTGAGTATTGCAGCTTGGGA
TGTAGGTCTTCCGTGTGTGACAATGTGATCAACACAGGTAAATAAAATCCATCTGAGTATATTTATATTTCATTTGTACA
TGCAAACTAATTGAAAAGTTAGTTCTTGACGCATACTATCCTATTTTGGCACCAGCTGACAACACAGAAGAGATGAAACT
CTATGTGAAACGCTGCGGGGATGCTTGTGACAGTTTCTGTAAGGGGGATACTCTCTTGGCATCCCTTGATGACTAATAAT
GCATATGCTTGGTCTATGATTTCACAGGCCAAAGTTATGTCACACCATCGTGTTCAATAAAAAACAGGATCCCATTGAGA
GTATCCAAACCAGTGTGTCAGTTTGTTTATGTGCTTGTGTGTATTTTCTTTTGTTGCTCCAATAAAGAGATATCATGGTG
G-TGTCATATTGATGCCTGCCTGATGTACTGCCATGATTGAGATATAATAATATATGTTGTATCGTTTTTCTGTGGATAT
AAACTC
>chr1D_1584
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-------TTTGGCAGATGAACCAAACGCCATTGAGTATTGCAGCTTGGGATGTAGGTCTTCCGTGTGTGACAACATGATC
AACACAGGTAAATAAAATCCATCTGAGTATATTTATATTTCATTTGTACATGCAAACTAATTGA----AAAGT-TAGTTC
TTGACGCATACTATCCTATTTTGGCACCAGCTGACAACAGTACTGAAGAGATGAAACTCTATGTGAAACGCTGCGGTGTT
GCTTGTGACAGTTTCTGTAAGGGGGATACTCTCTTGGCATCCCTTGATGACTAATAATGCATATGCTTGGTCTTAGATTT
CACAGGTCAAAGTTATGTCTCACCATCGTGTTCAATAAAACAGGATCCCATTGAGAGTATCCAAACCAGTGTGTCA----
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--------------------GTTTGTTTATGTGCTTGTGTGTATTTTCTTTCGTTGCTCCAAT-AAAAGATATCATGGTG
GATGTCATATTGATGCCTGCTTGATGTACTGCCATGACTGAGATATAATAATATATGTTGTATCCTTTTCCTATGGATAT
AAACTC
>SNPs
----------------------------S-------------S-------------------------------------
----------S---------------S-----------------------------------S-----S--------S--
--------------------S---------------------------------S-----------------S-------
-------------------------------------S--------S---------------------------------
---------------S----------------------------------------------------------------
------------S------------------------------------------------S------------------
--------------------SS---------------------------------------------------------S
S-S-----------------------------------------------------------------------------
----------------------S-----S------------------------------S--------------------
-----------S--------------------------------------------------------------------
--------------------S-----SS--S------------S------------------------------------
--------------------------------S----------------------------------------------S
--------------------S-SSSSSSSS--------------------------------------------------
------------------------------------------------------------------------S-------
---------------------------S-----------------------S---S------------------------
---------------S-----S----------------------------------------------------------
-------S-----------SSSS--------------------------------------------------S------
---S----------------------SS----------------------------------------------------
----S----S----------------------------SS----S----------S---S--------------------
-------SSSSSSS---------------------------------------S--S-----------------------
--------------------------------------------------------------------------------
----------------S---------------------------------------------------------------
----------------------------------------------------------------------------S---
--------------------------------------S-----------------------------------------
-----------------------------------------------------------------------------S--
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----------------------------------------------------------S---------------------
--------S---------------S----------S--------------------------------------------
--------------------------------------------------------------------------------
-------------------S----------------S-------S---------------------------S-------
-------S-----S-----------------------S-S---------------S------------------------
----------------------------------S------------------------------------------S--
----------------S---------------S----------S-----------------------SSSS-SSSS-SS-
S-SSS--SS-S--SSSSSS-S--SSS-SSSSSS-----------------------------------------------
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--------------------------------S-SS-------SS--S-----SSSSS-SSS--SSSSSSSSS-S--SSS
SSS-SSSSSSS-S--SSSSSS-S-SSSS-S-S--SSSSSS-SSSSSSSSSS-SSSSSSSSSSSS--SS-SSSS-SSSSSS
-S-SS--S-SSSSSSSSSSSSS-SS-SSS-SSSSSSSSSSSS-SSSSSS-SSSSS-SSSSSSSSSSSSSSSSSSS-S-SS
SSSSS-S-SSS-S--SSS--SSSS-SSSS---------------------------------------------------
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>forward_828
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--------ACATGGCTGGCACGATTTTG----------------------------------------------------
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>reverse_2340
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-------------------ATGGTAGCACAGTGGTGGTG-----------------------------------------
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