>input_sequence_66986
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--------------------------------------------------------ATGGCTGATCTCTGTACCAAGTTT
ACCTTGTCCGGATGCCACCGGTTTTACCCTGAGTTTCCAGGTTAGAGCAAATTCAGACCCAATTCTCCTTTTTATTGTCA
TTGCTTATGTTAGTTTGACTGACCTTTATCACTTGCAGATCACTGGTATGATCTGATTGAAGCTCCTGTCCGTGTGCCGA
AGTTCACCCCTCGCAAGAAGCACAACCGTGCGTATAGGTCCCGCCATGGTGAGTTTTTGAACTTGCTGCCTCTGTATTCT
TTGCTTCACACTGGAAGCTATCATATGTTAGTTTACAGGTCTAGTAACAGATTTGCTGTACTAACTGTAGTCTCTCCACA
AATCCTTTTCACTTTTCAGGCCATGTTATCATTGGTTTCC---AGGTAAATGAAGACACAGAGCAGCTGTTCGAGGACGA
TGGTGTGGAGGAAGAGGAGCAGCTGTTCGAGGACAATGCTGTCGAACCAATTCCTGTGAATGAAGTGGAGGGGGTCGCCA
TTGATGAGGATGTTCCAGAGCTGGGAATTGAGGACCAGGGTACACAATTTATAGATTATTCTTTCTGTCAAGGATAGTTA
GATTGCTCATTAAATTTTAATCTTTTTTTCTTTGGTTACACAGCAGAGGAGGAACATGTCGAGGATGATGACGTGGAAGC
AATAATTCTGAATGAGGTCGCCCCCATTGATGGCGGAGATGTTCCTGAGGAATACACTGAGTACGAGGGTGGCCTTCTTG
CGGGTATGCAACTTGTATTTTTTTTCCAAGCATAATTAGATTTCTACTAGTTCTAATACTTCTCATTGTTACACAGCTAA
GCTTGGTGGCGAGGACGGCGACAAGGTCGGGCTTTAG-------------------------------------------
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>chr6B_1_TraesCS6B01G437400
TCATTTCACTTGTCTGTTTCCCCTTCTTAGTCTCTGTCCTCCTCACACTCGTCGGGAGACTGTCGCACTGATTAGTCAAC
TGAGTATTGTTCTGGAGCTCCATACTGCGCATCCCACTGCTGATTTCTTCTGCATATTTAACTAGA-------------G
GCCAACCAGCGCTCTCCCTTTTGCGTGAACACAATCCTCCCGCAGCCACCAGGCTCGCCACAGGAGCAGGAGAATCCGAG
AGCGTTCTTCTGAAGTACAAGATCCGAGAAGGTTCTGTAACCAATCATTACCTGTGAATCGAAAACGATTTTCATCAGGC
AGTTCCCAAAATGCCCTCATTTCACTC---GGCGCTTTGGATTTAGTGCAGTTAACCACTGCATGAAATTCATTCTCCGT
CTCAATGCCACAGATATTACAGATGCGGTCTACCTCGAGCGCTCTTTTCCACTTGTTTTCTTTTGTTGGCAGAGTTTCAG
TGGCTACCCGGCCCGCCAAGCAAATATCCTAATTTTTTCTGGCACTTTAGCTTTCCAAATATAATCCCATATGCTCCTGT
CTTTTGCATCACGAACTGAACTGGAGGCCGTCATATTACTTTGCTGCTTCAGCTGTGAACCCAGCTTGTAGGCGCCGTGA
ACAGAAAATACGCCAGACTTCTCCTCATGCCACGCTACGCAATCCCCAACATCAGTCTGGGGGATTTTGATTTTACAGAT
TTCCTCCGCATCGTAGTTGTGAAAGAGTTGGTGTATCAGAGCCTCATTCCACTCCTTTTTATCTTTATGCATCAGTTGGT
TTACCCACCTTAGTTTAGATCTCCTTTTAAATTCTGTAACCTTGAGGCCACTTTTCCTACGAACCCACTGGTCCCTTTGC
TTTGATTTTGAGATTTGGGAGCAGGGACGGGAGGGTTTTGATTTGGGTGCGTCGTAGGCTGCAGGCCAAACGAAGTTTGA
TCTGTTTGAATTCATGATTATTGACTAACTGACAGCATTTTCATCAGATCACTAAGATGGCTGATCTCTGTACCAAGTTT
ACCTTGTCCGGATGCCACCGGTTTTACCCTGAGTTTCCAGGTTAGAGCAAATTCAGACCCAATTCTCCTTTTTATTGTCA
TTGCTTATGTTAGTTTGACTGACCTTTATCACTTGCAGATCACTGGTATGATCTGATTGAAGCTCCTGTCCGTGTGCCGA
AGTTCACCCCTCGCAAGAAGCACAACCGTGCGTATAGGTCCCGCCATGGTGAGTTTTTGAACTTGCTGCCTCTGTATTCT
TTGCTTCACACTGGAAGCTATCATATGTTAGTTTACAGGTCTAGTAACAGATTTGCTGTACTAACTGTAGTCTCTCCACA
AATCCTTTTCACTTTTCAGGCCATGTTATCATTGGTTTCC---AGGTAAATGAAGACACAGAGCAGCTGTTCGAGGACGA
TGGTGTGGAGGAAGAGGAGCAGCTGTTCGAGGACAATGCTGTCGAACCAATTCCTGTGAATGAAGTGGAGGGGGTCGCCA
TTGATGAGGATGTTCCAGAGCTGGGAATTGAGGACCAGGGTACACAATTTATAGATTATTCTTTCTGTCAAGGATAGTTA
GATTGCTCATTAAATTTTAATCTTTTTTTCTTTGGTTACACAGCAGAGGAGGAACATGTCGAGGATGATGACGTGGAAGC
AATAATTCTGAATGAGGTCGCCCCCATTGATGGCGGAGATGTTCCTGAGGAATACACTGAGTACGAGGGTGGCCTTCTTG
CGGGTATGCAACTTGTATTTTTTTTCCAAGCATAATTAGATTTCTACTAGTTCTAATACTTCTCATTGTTACACAGCTAA
GCTTGGTGGCGAGGACGGCGACAAGGTCGGGCTTTAGATTGCTACTATTTCTGGTATGTGATGGATCGAACCTAGGGTTG
ATCTTTAGATTGCTACTGTTTCTGTTTGTTTGTTGTGATGAGATCACATGGTTTTTATTATATGCTTATTTGCTTACATG
GATGACCCTGACTCCTTAAATAAACAACATGGTCTTTGTTTGCTGTGATTAGAATAGAAGGGACTTGTGTTCATTGCTTA
TACATTCTGAACTGGCCAATGTATCTTAGCAAATGGGATTGGATGACTAA------TACCTTTTATGTGCTAGATCAACT
TGGTTTGCTATGATGAGAACATAAGGGACTTGTGTTGAGAAAATGCCTCTTGAAAAGTGCCTTTTCATTGCCTATACATC
CTAAATTTACCAAAATATCTTAGCAAATGGGATTAGACGACTAATATCTTTTATGTGCCAGATTAAAGATAAATATAGTT
TGCATATTGAAGTTATTGCCATTGAAGTGTCTGTGTTTTATCCTCTGTCCCTTTATGCTGGATTAGATCTTAAGGAAGGT
ATATGCTATAAAATTGCACCTTCAATGTTTGTATATGACAGCAACTCATATTCTCTAACTTAAAATAACCAAGGTATCTC
ATGATCACCTTGGATTTAATTTTATTTTCTTTCTGCTTTGCTGTGCTGAGTTCACAAGGACTACGTCTTTGGAAAGTGAC
TTCTGAAAAAGTGCTCCTGCACTATGAATTCTGAACTAGTCAAGTTTTTTTGTGTAAAATGTTAAAATAATGAAACAATA
ATTGTACTCCCTCCGTCCCATAATATAAGAACATTTTTGACATTAGTGTAGTGTCAAAAACGTAATGTCAAAAACGTTCT
TATATTATGAGACAGAGGGA-GTAATGTTTTTTTAACCATCTCTGCTCGCATTAACCATACTGTAGCGAAAAGTTGGCCC
CACTTCAGAACTGGTTTTAGCTTCTAGAATATTTATTGGTCATTTAGATCTTGTGTCGTTGATCTTTGTTTCTGCATTTT
GCAT
>chr6A_1
TCATTTCACTTGTCTGTTTCCCCTTCTTAGTCTCTGTCCTCCTCACACTCATCGGAAGACTGTCGCACTGATTAGTCACC
TGAGTATTGTTCTGGAGCTCCATACTGCGCATCCCACTGCCGATTTCTTCTGCATATTTAACTAGAAATTGGACAGACTG
GCCAACCAGCGCTCTCCCTTTTGCGTGAACACAATCCTCCCGCAGCCACCAGGCTCACCACAGGAGCAGGAGAATCCGAG
AGCGTTCTTCTCAAGTACAAGATCCGAGAAGGTTCTGTAACCAATCATTACCCGTGAATCGAAAACGATTTTCATCAGGC
AGTTCCCAAAATGCCCTCATTTCACTCCTTGGCGCTTTGGCTTTAGTGCAGTTAACCACTGCATGAAATTCATTCTCCGT
CTCAATGCCACAGATATTACAGATGCTGTCTACCTCAAGCGCTCTTTTCGACTTGTTTTCTTTTGTTGGCAGAGTTTCAG
TGGCTACCCG-----CCAAGCAAATATCCTAACTTTTTCTGGCACTTTAGCTTTCCAAATATAATCCCATATGCTCCTGT
CTTTTGCATCACGAACTGAACTGGAGGCCGTCATATTACTTTGCTGCTTCAGCTGTGAACCCAGCTTGTAGGCGCCGCGA
ACAGAAAATACGCCAGACTTCTCCTCATGCCACGCTACGCAATCCCCAACATCAGTCTGGGGGATTTTGATTTTACAGAT
TTCCTCCGCATCATAGTTGTGAAAGAGTTGGTGTATCAGAGCCTCATTGCACTCCTTTTTATCTTTATGCATCAGTTGGT
TTACCCACCTTAGTCTAGATCTCCTTTTAAATTCTGTAACCTTGAGGCCACTTTTCCTACGAACCCACTGGTCCCTCTGC
TTTGATTTTGAGATTTGGGAGCAGGGACGGGAGGGTTTTGATTTGGGTGCGTGGTAGGCTGCAGGCCATACTAAGTTTGA
TCTGTTTGAATTCATGATTATTGACTAACTGACAGCATTTTCATCAGATCACTAAGATGGCTGATCTGTGCACCAAGTTT
ACCTTGTCCGGATGCCACCGGTTTTACCCTGAGTTTCCAGGTCAGAGCAAATTCAGACTCAGTTCTCCTTTTTATTGTCA
TTGCTTATGTTAGTTTGACTGATCTTTATCACTTGCAGATCACTGGTATGATCTGGTTGAAGCTCCTGTCCATGTGCCGA
AGTTCACCCCTCGCAAGAAGCACAACCGTGCGTATAGGTCCCGCCATGGTGAGTTTTTGAACTTGCTGCCTCTTTATTCT
TTGCTGCACACTGGAAGCTATCATATGTTAGTTTACAGGTCTAGTAACATATTTGCTGTACTAACTGTAGTCTCTCCACA
AATCCTTTTCACTTTTCAGGCCATGTTATCATTGGTTTCCCTGAGGCAAATGAAGACATAGAGCAGCTGTTCGAGGACGA
TGGTGTGGAGGAAGAGGAGCAGCTGTTCGAGGACAATGGCGTTGAACCAATTGCTGTGAATGAAGTGGAGGGGGTTGCCA
TTGATGAGGATGTTCCAGAGCTGGGAATTGAGTACCAGGGTACACAATTTATAGATTGTTCTTTCTGTCAAGGATAGTTA
GATTGCTCATTAAATTCTAATATTTTTTTCTTTGGTTACACAGCAGAGGAGGAACATGTCGAGGATGATGACGTGGAAGC
ATTAGTTCTGAATGAGGTCGCCCCCATTGATGGCGGAGATGTTCCTGAGGAATACACTGAGTATGAGGGTGGCCTTCTTG
CGGGTATGCAACTTGTAGTTTTTTTTCAAGCATAATTAGATTTCTACTAGTTCTAATAGTTCTCATTGTTACACAGCTAA
GCTTGGTGGAGAGGACGACGACAAGGTCGAGCTTTAGATTGCTACTATTTCTGGTATGTGATGGATCGAACCTAGGGTTG
ATCTTTAGATTGCTACTGTTTCTGTTTGTT-GTTGTGATGAGATCACATGGTTTTTATTATATGCTTATTTGCTTACATG
GGTGACCCTGACTCCTTAAATAAACAACATGGTCTTTGTTTGCTGTGATTAGAATAGAAGGGACTTGTGTTCATTGCTTA
TGCATTCTGAACTGACCAATGTATCTTAGCAAATGGGATTGGATGACTGATACTCCTACCTTTTATGTGCTAGATCAACT
TGGTTTGCTATGATGAGAACATAAGGGACTTGTGTTGAGAAAATGCCTCTTTAAAAGTGCCTTTTCATTGCCTATACATC
CTAAATTTACCAAAATATCTTAGCAAATGGGATTAGACGACTAATATCTTTTGTGTGCCAGATTAAAGATAAATATAGTT
TGCATATTGAAGTTATTGCCATTGAAGCGTCTGTGTTTTATCCTCTGTCCCTTTATGCTGGATTAGATCTTAAGGAAGGT
ATATGCTATAAAATTACACCTTCAATGTTTGTATGTGACAGCAACTCATATTCTCTAACTTAAAATAACCAAGGTATCTC
ATGATCACCTTGGATTTAATTTTCTTTTCTTTCTGCTTTGCTGTGCTGAGTTCACAAGGACTACATCTTTGGAAAGTGAC
TTCTGAAAAAGTGCTCCTGCACTATGAATTCTGAACTAGTCAAGT-TTTTTGTGTAAAATGTTAAAATAATGAAACAATA
ATTGTAAAAAAAATCTAACCATCTCTGCTCGCATTAACCACTATGAATTCTGAACTAGTCAAGTTTTTTGTGTAAAATGT
TAAAATAATGAAACATTAATTGTAATATTCTTTTAACCATCTCTGCTCGCATTAACCATACTGTAGCGAAAAGTTGACCC
CACTTGAGAACTGGTTTTAGCTTCTAGAATATTTATTGGTCATTTAGATCTTGTGTCGTTGATCTTTGTTTCTGCATTTT
GCAT
>SNPs
--------------------------------------------------S----S----------------------S-
----------------------------------------S---------------------------------------
--------------------------------------------------------S-----------------------
-----------S----------------------------------------S---------------------------
----------------------------------------S---------------------------------------
--------------------------S---------S------------S------------------------------
----------SSSSS-----------------S-----------------------------------------------
-----------------------------------------------------------------------------S--
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------------S-----------------------------------S-------------------------------
--------------S-------------------------------------------------------------S---
----------------------------------------------------S---------------S--S--------
-------------------------------------------------------------------S--S---------
------------------------------------------S---------------S--S------------------
----------------------S--------------------------------S---------------S--------
-------------------------------------------------------------------------S------
-----S-------------------------------------------S------------------------------
----------------------------------------------S-----------S---------------------
--------------------------------------SS--S---------S----------------------S----
--------------------------------S------------------------S----------------------
----------------S----S----------------------------------------------------------
-S--S----------------------------------------------------------S----------------
-----------------S-------S--------------------------------S---------------------
---------S-------S-----------S--------------------------------------------------
------------------------------S-------------------------------------------------
-S------------------------------------------------------------------------------
-S------------S---------------------------------S-------------------------------
---------------------------------------------------S----------------------------
----------------------------------------------------S---------------------------
---------------------------S----------------------------------------------------
---------------S------------------S---------------------------------------------
-----------------------S----------------------------------------S---------------
---------------------------------------------S----------------------------------
------SSSSSSSSS-SS-SSSS-S-SSSSS----SSSS--SS-SSSS-SSSSS-S-SSSSSSSS-S-SSSSS-SSS-S-
--S-S--SSSS-SSSSSSSS------S--S----------------------------------------------S---
-----S--------------------------------------------------------------------------
----
>forward_450
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------------------------------TACCTCGAGCGCTCTTTTCC------------------------------
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>reverse_1493
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----------------------------------------------------CCTGTGAATGAAGTGGAGGGG-------
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>forward_1480
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--------------------AGCTGTTCGAGGACAATGCT----------------------------------------
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>reverse_2750
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-----------------------------TTTTTAACCATCTCTGCTCGCA-----------------------------
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