>input_sequence_66974
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-------------------------------------------------ATGGCCAACAGGTGGTGGGACGAAGGCCGGC
TGACGGAGGCGCCGC---CTGCATCAGGCCTCGCCAGCAACCACAAC---------------CAGCAGCAGCAGCTGGAG
GACGCCATGGCGGCGCCCAAGGTGGACGGGGAGAGCAGCCACAGCGGCGGAGGGAGCGGGCAGGAGCAGGACG------A
CGAGCCCAAGGAGGGCGCGGTGGTGGTGCCGGCCAACCGGCGCCCGCGCGGCCGCCCCCCGGGCTCCAAGAACAAGCCCA
AGCCGCCCATCTTCGTCACGCGCGACAGCCCCAACGCGCTGCGCAGCCACGTCATGGAGGTGGCCGGCGGCGCCGACGTC
GCCGAGTCCATCGCCCACTTCTCCCGCCGCAGGCAGCGCGGCGTCTGCGTGCTCAGCGGCGCCGGCACCGTCGCCGACGT
CGCCCTGCGCCAGCCCTCCGCTCCTGGCGCCGTCGTCGCTCTCCGCGGAAGATTCGAGATACTCTCCCTCACCGGCACCT
TCCTCCCCGGGCCCTCACCGCCGGGCTCCACGGGCCTCACCGTCTACCTCGCAGGCGGCCAGGGCCAGGTGGTCGGGGGC
AGCGTCGTGGGCGCGCTCACCGCGGCTGGGCCCGTCATGGTGATCGCGTCCACCTTCGCCAACGCCACCTACGAGCGGCT
GCCGCTGGACGACGCCGAGGAGGATCACCACCAGCTGGAGGCCGCCCGCAGGCACGGCGCCCCCGGCGCAGGTGCTCCTC
TTCCTCCTATGATGGCCGGCGACCCCTCCGCGGCGGGGATGCCGATGTACGGCGTGCCGCCGAACCTGATGCCGGGAGGT
GGCGGGCACGCGGCGCCGGAATGGGCGGCGCATGCACGGCCGCCCTACTAG-----------------------------
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>chr4A_1_TraesCS4A01G312400
TAACATGAATAAACCGGTTGGTGGGGCTGGTAATGTATGCCAATCCACATTTGATGGTAGAAGGGTGACTCATTTTTAAG
TA-TACACACATGTAGGCAGCTAAACAAATGGTACCAATAGTGGTCCATGCAATCATACAAAGTATTTTTT-----TTTT
GTATGT--GGGAGTTGTACTCCCCACCACGTTACCCACCGTAAAATATAGGTAAACCAAGTAATAGGGGTGCAC--TTAG
CCATAATTTTCTCTATGTAAGAAGAACAAATGCCATGTACACATACTGCTTTAG---------TACTAGTAT-----ACA
TACGTATCGATCGATCTATAGTGAAGTTAATATTTTTATATAACTATAATGAAGTGAATTAGCTTGGAGGCAGGTGTGGA
ACAAGTACAACTAGAAGGTACCCATCAACGTTAACACACCTCATGCATCCCTCTCCATGACAAAGCTTGCTTACTCAGCT
TGCAGCAAGCAAGTCTTCCTCCCCCTCTTCTTCTACCCTCTAGCTAGCTAGCTTTCTGGATCCTCCATATATACACCACA
CACTCGCTGAGGCCTCAGCTAGTGCACACCAACAAAAAGAAGGAG-----------------CGGCCAAAATCTCATACT
AGATCGATCC-ATCGATGGGGATCTAGCTAATTCTCCACCCTAT---CTGGTTTGATTAGCTGCAATTTCATGGCGCAC-
---AAGGTACT----CATATATTTCCTCTTCATCTCCTAGCTAGCTA----------------------------GCCCC
TTTAGTTCCATGCATCCTCTT------CTTGCTCATGAAATCAAAAGATAACAAGCTAGGAGCTGG--------------
--------TTCTTAATTCTGTAAACAAGCATCTATCACATG----TATGGTTGTTGCTAGTTCCT-TCGATTCGATTTCG
A-----------------------TCTCTCATCTTCATTTCATTTGTATG---CAGATCCAGGGCATCATG--GCGAAGA
AGACAAGT------AATTAATCAAGAAAGCTTGCTAGCCACCAAGAAA----------------GAAGAGCATATCAAGA
AAGGAAGCAAGCTAGG---TAGCACAGATCAGTTAGGTTAGGTGG--AGATGGCCAACAGGTGGTGGGACGAAGGCCGGC
TGACGGAGGCGCCGC---CTGCATCAGGCCTCGCCAGCAACCACAAC---------------CAGCAGCAGCAGCTGGAG
GACGCCATGGCGGCGCCCAAGGTGGACGGGGAGAGCAGCCACAGCGGCGGAGGGAGCGGGCAGGAGCAGGACG------A
CGAGCCCAAGGAGGGCGCGGTGGTGGTGCCGGCCAACCGGCGCCCGCGCGGCCGCCCCCCGGGCTCCAAGAACAAGCCCA
AGCCGCCCATCTTCGTCACGCGCGACAGCCCCAACGCGCTGCGCAGCCACGTCATGGAGGTGGCCGGCGGCGCCGACGTC
GCCGAGTCCATCGCCCACTTCTCCCGCCGCAGGCAGCGCGGCGTCTGCGTGCTCAGCGGCGCCGGCACCGTCGCCGACGT
CGCCCTGCGCCAGCCCTCCGCTCCTGGCGCCGTCGTCGCTCTCCGCGGAAGATTCGAGATACTCTCCCTCACCGGCACCT
TCCTCCCCGGGCCCTCACCGCCGGGCTCCACGGGCCTCACCGTCTACCTCGCAGGCGGCCAGGGCCAGGTGGTCGGGGGC
AGCGTCGTGGGCGCGCTCACCGCGGCTGGGCCCGTCATGGTGATCGCGTCCACCTTCGCCAACGCCACCTACGAGCGGCT
GCCGCTGGACGACGCCGAGGAGGATCACCACCAGCTGGAGGCCGCCCGCAGGCACGGCGCCCCCGGCGCAGGTGCTCCTC
TTCCTCCTATGATGGCCGGCGACCCCTCCGCGGCGGGGATGCCGATGTACGGCGTGCCGCCGAACCTGATGCCGGGAGGT
GGCGGGCACGCGGCGCCGGAATGGGCGGCGCATGCACGGCCGCCCTACTAGCTACCTACCTAGCTAGATAGCATCAAGCA
GTCAGGACTTCAGGAGCAGCTCGTCCAT-GTGTCAACGCCTCCAAG---CATCAAGATCAG------------------A
TCTTCAACGAAATCCATCGTCATACCAATAACTAG---AGAA-TTGCATTGCATATATATACATCTAGCAGCTGGTAATT
AA----CTAGAATCTCTGCTTAATTTGC-TTTGC---TTA---TCTGTGAAAAAACATC-TGGAGTTACAG---------
-ATGTATGAGGAATTATAA----ATTAGCTCCTTTTACTGCCTGCAGATATGCTAGTGAT--------------------
-----------TGTATGACTCTTATATAC--TCCATCTCTCAGATTATTGTGTGCATATATATCCTACATACTTCACAAA
GTTCCTTCAACTTAACTAGATATTT-------------------------------------------------------
------------------------------------------------------------AGGTGGGGAGAAGGAATGAT
GAATATGTATACATAGCTCGTTTCATGCCATTGCAATTCTA---TGAGCACAAGAGCCTGACATTGCTGAGAAATATTGA
C-AATGAATTCCACATTTCTCGCAATGATGTTGCAAGATTAATTAGTTTTGCTTGGTCCAATAGATCAATGT---CAATA
TATTTATGAAATTTAATCTCCCCCCTAACTAAACTAAACTTTACTCGAGTCATTTTTTTTTAGCAAATTTTACTCGATGG
ACACTGCTCA-TCCTTTGGTTACATGAATTTCATTCCCCATTGCTAGCACTGTTTTGACAAGTTGATGTTGCCATGAGTG
CATGAGGTTGGCCATGTGTGGTCATTTCATCAGGTTTATATGCCTTTTTGAGTCGCATGATCCCCTAAAACATATGAATA
TAGCATAATTCCATCACATGTCATGAGGTTTGTGGTGGGATTGTGGATATCTTGTTGCGAGGAAGATCCATATTGGATTG
TCTTGGTTCTTTTTTCTTTATGTTTTGTAAGACGATTCGCTCGGCATCAACTAATATAGAGGCCAGGTGCGCTATCAACC
TTTCTGAAAAAAATATTAGTTATCTATGGTCGTAGCATCAAAAGAATGTCTTTTTTGTT
>chr4D_1
TAACATGAATAAACCGGTTGGTGGGGCTGGTAATATATGCCAATCCACATTTGATGGCAGCAGGGTGACTCATTTTTAAG
TA-TACATACTTAGAGGCAGCTAAAAAAATGGTACCAATAGTGGTCCATGCAATCATACAAAGTAT----T-----TTTT
GTATGT--GGGAGTTGTACTCCCCACCACGTTACCCACTGTAAAATATAGGTAAACCAAGTTAAAGGGGTGCACACTTAG
CCTTAATTTTCTGTATGTAAGAAGAACAAATGCCATGTACACATACTGATATAG---------TACTAGTAT-----ACA
TACGTATCGATCGATCTATAGTGAAGTTAATATTTTGATA--ACTGTAGTGAAGTGAATTAGCTTGGGGGCAGGTGTGGA
ACAAGTACAACTAGAAGGTACCCATCAACGCTAACACACCTCATGCATCC--CTCCATGACAAATCCTGCTTACTCAGCT
TGCAGCAAGCAAGTCTTCCTACCCCTCTTCT---ACCCTCTAGCTAGCTAGCTTTCTCGATCCCCCATATATACAACA--
------------------------CACACCAGCAAAAAGAAGGAG-----------------CAGCCAAAACCTCATACT
AGATC-----------------------TAGCTAATTCTAGATCTTCCTGGTTTGATTGGTTGCAATTTCATGGCGCAC-
---AAGGTACTCGATCATATATTTCCTCTCCATCTCCTAGATACTAGATC--TCAGGTTCATCGATC-----CCGGCCCC
TTTAGTTCCATGCATCCTCTT------CTTGCTCATGAAATCAAAAGATAACAAGGAGAGCTGTTTCCCAATCCCCACAC
ACATCATATTCTTAATTCTGTAAACAAGTATCTATCACATGCATGTATGGTTGCTGCTAGTTTTCTTCCATTTGATCTCT
TAATTTTGTG-TTGACATGAAGCTTCTCTGATCTTCATTTCATTTGTATG---CAGATCCACGGCATCATG--GTGAAGA
AGACAACT------AATTAATCAAGAAAGCTTTGCTAGC-------------CACCAAGAAGAAGAAGAGAAGATCAAGA
AAGGA---------------AGCACAGATCAGTTAGGTTAGGTGG--AGATGGCCAACAGGTGGTGGGACGAAGGCCGGC
TGACGGAGGCGCCGC---CTTCATCAGGCCTCGCCGGCAACCACAACCAC---------------CAGCAGCAGCTGGAG
GACGCCATGGCGGCTCCCAAGGTGGACGGGGAGAGCAACCACAGCGGCGGAGGGAGCGGGCAGGAGCAGGACG------A
CGAGCCCAAGGAGGGCGCGGTGGTGGTGCCGGCCAACCGGCGCCCGCGCGGCCGCCCCCCGGGCTCCAAGAACAAACCCA
AGCCGCCCATCTTCGTCACGCGCGACAGCCCCAACGCGCTGCGCAGCCACGTCATGGAGGTGGCCGGCGGCGCCGACGTC
GCCGAGTCCATCGCGCACTTCTCCCGCCGCAGGCAGCGCGGCGTCTGCGTGCTCAGCGGCGCCGGCACCGTCGCCGACGT
CGCCCTGCGCCAGCCCTCCGCCCCCGGCGCCGTCGTCGCGCTCCGCGGCCGCTTCGAGATACTCTCCCTCACCGGCACCT
TCCTCCCCGGGCCCTCGCCGCCCGGGTCCACGGGCCTCACCGTCTACCTCGCAGGCGGACAGGGGCAGGTGGTCGGGGGC
AGCGTCGTGGGCGCGCTCACCGCCGCCGGGCCCGTCATGGTGATCGCGTCCACCTTCGCCAACGCCACGTACGAGCGGCT
GCCGCTGGACGACGCCGAGGAGGATCACCATCAGCTCGACGCCACCCGCAGGCACGGCGCCCCCGGCGCTGGTGCTCCAC
TTCCTCCGATGATGGCCGGCGACCCCTCCGCCGCGGGGATGCCGATGTACGGCGTGCCGCCGAACCTGATGCCGGGAGGT
GGCGGGCACGCGGCGCCGGAATGGGCGGCGCATGTACGGCCGCCCTACTAGCTACCTACCTGC-----TAGCATCAATCA
GTCAGGACTTCAGGAG----TCGTCCAT-GTGTCGACCTCTCCGAGCATCATCAAGATCAG------------------A
TCTTCAACAAAATCCATCC---TACCAATAACTAG---AGAACTTGCATTGC----ATATACATCTAGCAGCTGGTAATT
AATTAACTAGAATCTCTGCTTAATTTGC-TTTGCTTATTA---TCTGTGAAAAATCATC-TGGAGTTACAA---------
-ATGTATGAGGAATTATAA----ATTAGCTCCTTTTACTGCCTGCAGATATGTTAGTGAT--------------------
-----------TGTATGACTCTTATATAC--TCCATCTCTCAGATTATTGTGTGCATATATATCCTACATAGTTCACAAA
GTTCCTTCAACCTAACTAGATATTC-------------------------------------------------------
------------------------------------------------------------AGG--GGAAGAAGGAATGGT
GAATATATATAAATAGTTTGTTTCACGCAATTGCATTTC---AGTGAGCACAAGAGCCTGACATTGCTGAGAAATATTGA
TAAATGAATTCCACATTTCTCGCAATGATGTTACAAGATTAACCAGTTTTGCTTGGGCCGATAGATCAATGTATACAAGA
TACTTATGAAATTTAATCTTATGTCTACTTAAACTAAACTTTACTCGAGTCAC--TTTTTTAGCAAATTTTACTCGATCG
ACATTGCTCA-TCCTAGGGTTACATGAATTTCTTCCCACATTTCTAGCACAGTTTTGACAAGTTGATATTGCCATGAGTG
CATGAGGT-GGCCACGTGTGGTCATTTCATCAGGTTTACGGTCCTTTTTGATTCGCATGATCCCCCAAACATAGCAATAC
AGAATTAAT-----------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>chr4B_1
TAACATGAATAAACCGGTTGGTGGGGCTGGTAATATATGCCAATCCACATTTGATGGTAGCAGGGTGACTCATTTTTAAG
TACTACATACTTGTAGGCAGCTAAAAAAATGGTACCAATAGTGGTCCATGCAATCATACGAAGTAT----TTTT--TTTT
GTATGT--GGGAGTTGTACTCCCCACCACGTTACCCACCGTAAAATATAGGTAAACCAAGTTAAAGGGGTGCACACTTAG
CCTTAATTTTCTGTATGTAAGAAGAAG-AATGCCATGTACACATACTGCTTTAG---------TACTAGTAT-----ACA
TACATATGGATCGATCTATAGTGAAGTGAATATTTTTTGATAACTATAGAGAGGTGAATTAGCTTGGGGGCAGGTGTGGA
ACAAGTACAACTACAAGGTACCATC-------AACACACCTCATGCATCCCTCTCCATGACAAAGCCTGCTTACTCAGCT
CGCAGCAAGCAAGTCTTCCTCCTCCTCTTCT---ACCCTCTAGCTAGCTAGCTTTCTCGATCCTCCATATATACAACA--
------------------------CACACACTAGATGAGGCCTGAGCTAGTCCACTGCACACCAACAAAAACCTCATACT
AGATCAATCGAATCGATGGGGATCTAGGTAGCTAATTCTTGATCTTCCTGGTTTGCTTATCTGCAATTTCATGGCGCAC-
---AAGGTACTCATCTC--TATTTCCTCTCCATCTCCTAGCTAGATACTAGATCAGGTTCATCGATC-----CCGGCCCC
TTTAGGTCCATGCATCCTTTTCTTTAGCTTGCTCATGAAATCAAAGGATAACAAG--GAGCTGTTTCCCAATCCCCACAC
ACATCATATTCTTAATTCTGTAAACAAGTATCTATCACATGTATATATGGTTGTTGCTAGTTTTCGTCGATTCGATCTCT
T----TTGTG-TTGACATGAAGCTTCTCTGATCTTCATTTCATTTGTGTG---CAGATCCAGGGCATCATGGTGTGAAGA
AAACAACT------AATTAATCAAGAAAGCTTTGCTAGCTAGC---------CACCAAGAAGAAGAAGAGCAGATCAAGA
AAGGA----------------GCAGAGATCAGTTAGGTTAGGTGC--AGATGGCCAACAGGTGGTGGGACGAAGGCCGGT
TGACGGAGGCGCCGC---CTGCATCAGGCCTCGCCAGCAACCAGAACCAGAACCAGAACCAGCAGCAGCAGCAGCTGGAG
GACGCCATGGCGGCGCCCAAGGTCGACGGGGAGAGCAGCAACAGCGGAGGGGGCAGCGGGC------AGGACG------A
CGAGCCCAAGGAGGGCGCGGTGGTGGTGCCGGCGAACCGCCGCCCGCGCGGCCGGCCCCCGGGCTCCAAGAACAAGCCCA
AGCCGCCCATCTTCGTCACGCGCGACAGCCCCAACGCGCTGCGCAGCCACGTCATGGAGGTGGCCGGCGGCGCCGACGTC
GCCGAGTCCATCGCCCACTTCTCCCGCCGCAGGCAGCGCGGCGTCTGCGTGCTCAGCGGCGCCGGCACCGTCGCCGACGT
CGCCCTGCGCCAGCCCTCCGCGCCGGGGGCCGTCGTCGCGCTGCGCGGCCGCTTCGAGATACTCTCCCTCACCGGCACCT
TCCTCCCCGGGCCCTCGCCGCCGGGCTCCACGGGGCTCACCGTGTACCTGGCCGGAGGGCAGGGGCAGGTGGTCGGGGGC
AGCGTCGTGGGCGCGCTCACCGCAGCCGGGCCCGTCATGGTGATCGCGTCCACCTTTGCCAACGCCACCTACGAGCGGCT
GCCGCTGGACGACGCCGAGGAGGATCACCACCAGCTCGACGCCGCCCGCAGGCACGGTGCCCCCGGTGCTGGTGTTCCTC
TTCCTCCGATGATGGCCGGCGACCCCTCCGCCACGGGGATGCCGATGTACGGCGTGCCGCCGAACCTGATGCCGGGAGGT
GGCGGGCACGCGGCACCGGAATGGGCGGCGCATGCACGGCCGCCCTACTAGCTACCTACCTAGC--------ATCAATCA
GTCAGGACTTCAGGAG----TGGTCCAT-GTGTCGACCTCTCCGAGCATCATCAAGATCAG------------------A
TCTTCAACAAAGTCCATCGTCATACCAATAACTAGAGAAGAACTTGCATTGC----ATATACATCTAGCAGCTGGTAATT
AA----CTAGAATCTCTGCTTAATTTGCTTTTGCTTATTA---TCTGTGAAAAATCATC-TGGAGTTGCTTGCTCTAATT
CATGTATGAGGAATTATATATATATGAGCTCCTTTTACTGCCAGCAGATTGATTAATTAGTGATTGTATGGTAAAATACA
AAATCTCCAAATGTATGACTCTTATATACACTCCATCTCTTGGATTATTGCATGCATATATAGGGGACCGAAACTACTAC
GCGGACGATAGTAGCCTAGACGAACGCTGGACGATATTTGATTGAACGGTGTTGGTCAGTTTTGCTCCACGCATCAATGG
CTTGATCTGCTGAATCGTCTGAAAATCGTCCAGGGTTGTCGTCTATGTAGCAACGCTCATAGG--GGACGAAGGAATGGT
GAATATAAATACATAGCTTGTTTCATGCAATTATTACATTTAAGTGAGCACAAGAGCCTGACATTGCTGAGAAATATTGA
TA-ATGAATTCCACAATTCTCGCAATGATGTTGCAAGATTAATCAGTTTTGCTTGGGCCGATAGATCAATGTATACAAGA
TACTTATGGAATTTAATCTTCTGACTAACTAAAATAAACTTTGCTCGAGTCATC--TTTTTAGCAAATTTTACTCGATCG
ACATTGCTCAATCCTTGGGTTACATGAATTTTATTCCACATTTCTAGCACAGTTTTGACAAGTTGAAGTTGCGAAGAGTG
CA-GAGGT-GGCCATGTGTGGTCATTTCATCAAGTTTACGGGCCTTTTT-------------------------------
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>chr6D_120
--------------------------------------------------------------------------------
----------------------------------------GTGGTCCATGCAATCATACAAAGTAT----TCTCAGTTTT
GTATGTCCGGGAGTTGTACTCCCCACCACGTTACCCACTGTAAAATATAGGTAAACCAACTTAGGGGTGCGCTTAGCCTT
TTCAAATTTAAAAACAATGTCAT----------CATGTACACATACTGATCATATGTAGTACATACTAGTATGCATAACA
TGCGTATCGATGGATCTATATTTAACTTAACAAATT------------------------AGTTTGCAGGCAGGTGTTGA
ACAAGTAGAGCCAGAAGGTACCCATCAACACA-----------------CCTCTCCATGACAAAGCTTGCTTACTCAGCT
TGCAACAAGCAAGTCTTGGTCTTCCTCTTCT---ACCCTCTAGCTAGCTAGCTTTCTCGACCCCCC--------------
---------------------------------AAGAAAAAGGAG-----------------CAACCAAAATCTCATACT
AGATCGATTGATGGGAG-----------------------CTAG---CTGGTTTGATTAGCTGCAATTTCATGGCGCGTA
ATTAAGGTACT----GACATAGTTATCCTTCTTCTCCTAGCTAGCTAGATCGACCGGGTTTTTTGATCCCGGCCGGTCCC
TTTAGTTC----CATCTTCTT------CTTGGTCATGAAATCAAAAGCTAACAAG--GAGCTGATTCCCAATCCCCACAC
ATATGCTGA------------------------ATCACATC----TATATTTGTAGCATGTTTTT-TTC-TTCGATCTCT
T----GTGTGTTTGACATGAAGCTTCTCTGATCTTCATTTGTGTGCACAATTTCAGATCCAGGGCATCATGGTGAAGTAG
CTCGGCAAGAAGTCAACTAATCAAGAAAGCTTGCTAGCCGCCCTTGAAACTACACAAGGAAGAAGAAGACCAGATCGAGG
AAGGAAGCAAGCTATAGCACAG---AG---AGTTAGGTTAGGTGGAGAGATGGCCAACAGGTGGTGGGACGAAGGGCGGC
TGACGGAGGCGCCAGCAGCTGCATCGGGCCTCGCCGGCGACCAGAACCG------------------GCAGCAGCTGGAG
GACGCCATGGCGGCGCCCAAGGCGGACGGGGAGAGCAGCCACAGCGGCGGAGGGAGCGGGC------AGGACGACGAGCC
CGAGCCCAAGGAGGGCGCGGTGGTGGTGCCGGCGAACCGCCGCCCGCGCGGCCGGCCGGCGGGGTCCAAGAACAAGCCCA
AGCCGCCCATCTTCGTCACGCGGGACAGCCCCAACGCGCTGCGCAGCCACGTCATGGAGGTGGCCAGCGGCGCCGACGTC
GCCGAGGCCATCGCGCACTTCTCCCGCCGCCGGCAGCGCGGCGTCTGCGTGCTCAGCGGCGCCGGCGCCGTCGCCGACGT
CGCCCTGCGCCAGCCCGCCGCGCCCGGGGCCGTCGTCGCGCTCCGCGGCCGCTTCGAGATACTCTCCCTCTCCGGCACCT
TCCTCCCCGGGCCCTCGCCGCCGGGGTCCACCGGGCTCACCGTGTACCTCGCCGGCGGGCAGGGGCAGGTGGTCGGGGGC
AGCGTCGTCGGCGCGCTCACCGCCGCCGGGCCCGTCATGGTGATCGCGTCCACCTTCGCCAACGCCACCTACGAGCGGCT
GCCGCTGGACGACGCCGAGGAGGATCACC---AGCTGGAGGCCGCCCGCATGCACGGAGCCCCCGGCGGTGGTGTC----
--CCTCAGATGATGGCCGGCGACCCCTCTGCGGCGGGGATGCCGGTGTACGGCGTGCCGCCGAACCTGATGCCGGGAGGC
GGTGGGCATGCAGCGCCGGAATGGACGGCGCATGCACGGCCGCCCTACTAGCTACCTACCTAGC--------ATCAATCA
ATCAGGACTTCAGGATCAGATCAGTGGCCGTGTCGACGTCCCCAAGCATCAAGATCAGCTAGCTC-------TCCCCTCA
TCCTCATCCAAATCCATCC---TGCCAATAACTAG---A---CTTGCGTTGC------ATATATTTAGCAGCTGGTAAGT
AA----CTAGAATATCTGATT---TTGC-TTTGCTTATTAGTATCTGCCAAAAATCATCTTGGAGTTGCTTGCTCCGATT
CATGTACGAGGAATTATAA----ATGAGCTCCTTTTACTGC---------------------------------------
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>chr6B_935
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-----------------------------------------------------------AAGAAGAAGACCAGATCGAGG
AAGGAAGCAAGCTATAGGCTAGCACAG---AGTTAGGTTAGGTGGAGAGATGGCCAACAGGTGGTGGGACGAAGGGCGGT
TGACGGAGTCGCCGGCAGCTGCATCAGGCCTCGCCGGCAACCAGAACCG------------------GCAGCAGCTGGAG
GACGCCATGGCGGCGCCCAAGGTGGACGGGGAGAGCAGCCACAGCGGCGGAGGGAGCGGGC------AGGACGACGAGCA
CGAGCCCAAGGAGGGCGCGGTGGTGGTGCCGGCGAACCGGCGCCCGCGCGGCCGGCCGGCGGGGTCCAAGAACAAGCCCA
AGCCGCCCATCTTCGTCACGCGGGACAGCCCGAACGCGCTGCGCAGCCACGTGATGGAGGTGGCCAGCGGCGCGGACGTC
GCCGAGTCCATCGCGCACTTCTCCCGCCGCCGGCAGCGCGGCGTCTGCGTGCTCAGCGGCGCCGGCGCCGTCGCCGACGT
CGCCCTGCGCCAGCCCGCCGCGCCCGGCGCTGTCGTCGCGCTCCGCGGCCGCTTCGAGATACTCTCCCTCTCCGGCACCT
TCCTCCCCGGGCCCTCGCCGCCGGGCTCCACCGGGCTCACCGTGTACCTCGCCGGCGGGCAGGGGCAGGTGGTCGGGGGC
AGCGTCGTGGGCGCGCTCACCGCCGCGGGGCCCGTCATGGTGATCGCATCCACCTTCGCCAACGCCACCTACGAGCGGCT
GCCGCTGGACGACGCCGAGGAGGATCACC---AGCTAGAGGCCGCCCGCATGCACGGAGCCCCCGGCGGTGGTGTC----
--CCTCCGATGATGGCCGGCGACCCCTCCGCCGCGGGGATGCCGATGTACGGCGTGCCGCCGAACCTGATGCCTGGAGGC
GGTGGGCATGCGGCGCCGGAATGGGCGGCGCATGCACGGCTGCCCTACTAGCTACCTA------------GCACCATTCA
A--------TCAGGAGTA-------------GTCGACGTTTCCAAGCATCAAGATCAG------C-------TCCCCTCA
TCCTCATCGAAATCCATCC---TACCAATAACTAG---A---CTTGCATTGC------ATATATTTAGCAGCTGGTAAGT
AA----CTAGAATCTCTGATT---TTGC-TTTGCTTATTA---TCTGCCAAAAATCATCTTGGAGTTGCTTCCTCCGATT
CATGTATGAGGAATTATAA----ATGAGCTCCTTTTACTGGCTGCAGATTGGTTAGTGAT--------------------
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>chr6A_961
--------------------------------------------------------------------------------
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----AAGCAAGCTGTAGCACAT---AG---AGTTAGGTTAGGTGGAGAGATGGCCAACAGGTGGTGGGACGAAGGGCGGC
TGACGGAGGCGCCGGCAGCTGCATCAGGCCTCGCCAGCGACCAGAACCG------------------GCAGCAGCTGGAG
GACGCCATGGCGGTGCCCAAGGTGGACGGGGAGAGCAGCCACAGCGGCGGAGGGAGCGGGC------AGGACGACGAGCA
CGAGCCCAAGGAGGGCGCGGTGGTGGTGCCGGCGAACCGGCGCCCGCGCGGCCGCCCGGCGGGGTCCAAGAACAAGCCCA
AGCCGCCCATCTTCGTCACGCGGGACAGCCCCAACGCGCTGCGCAGCCACGTCATGGAGGTGGCCAGCGGCGCGGACGTC
GCCGAGGCCATCGCGCACTTCTCCCGCCGCAGGCAGCGCGGCGTCTGCGTGCTCAGCGGGGCCGGCGCCGTCGCCGACGT
CGCCCTGCGCCAGCCCGCCGCGCCCGGGGCCGTCGTCGCGCTCCGCGGCCGCTTCGAGATACTCTCCCTCTCCGGCACCT
TCCTCCCCGGGCCCTCGCCGCCGGGGTCCACCGGGCTCACCGTGTACCTCGCCGGCGGGCAGGGGCAGGTGGTCGGGGGC
AGCGTGGTGGGCGCGCTCACCGCCGCGGGGCCCGTCATGGTGATCGCCTCCACCTTCGCCAACGCCACCTACGAGCGGCT
GCCGCTGGACGACGCCGAGGAGGACCACC---AGCTGGAGGCCGCCCGCATGCACGGAGCCTCCGGCGGTGGTGTC----
--CCTCAGATGATGGCCGGCGACCCCTCCGCGGCGGGGATGCCGATGTACGGCGTGCCGCCGAACCTGATGCCGGGAGGC
GGTGGGCATGCGGCGCCGGAATGGGCGGCGCATGCACGGCCGCCCTACTAGCTACCTA------------GCATCAATCA
A--------TCAGGAG----TAGTCCAT-GTGTCGACGATTCCAAGCATCAAGTTCAG------CTAGCTCCTCCCATCA
TCCTCATCGAAATCCATCC---TACCAATAACTAG---A---CTTGCATTGC------ATATATTTAGCAGCTGGTAAGT
AA----CTAGAATCTCTGATT---TTGC-TTTGCTTATTA---TCTGCCAAAAATCATTTTGGAGTTGCTTGCTCCGATT
CATGTATGAGGAATTATAA----ATGAGCTCCTTTTACTGCCTGCAGAT-------------------------------
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>SNPs
----------------------------------S-------------------------S-------------------
-------S--S--------------S----------------------------------------SSSS----------
-------------------------------------------------------------S-S----------------
--S---------S-------------------------------------------------------------------
------------------------------------------------S-------------------------------
------------------------------S-------------------------------------------------
-------------------------------SSS-----------------------S-----------------S--SS
SSSSSSSSSSSSSSSSSSSSSSSS-------S-------------------------------S----------------
---------S-----------------S--SS-SSSSSSS---S------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------SSSS-SSS-SS--------------
----------------------------S---------------------------------SS------------S--S
S----------------------------S--------------------------------------------S-----
------S--------------------------------S--SSSS--------------------------S-------
--------------SS----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------S--S--------------S--------SS-S----------------------------
----------------S-----------------------------------------S-----S---------------
-----------------------S--S-----------------------------------------------------
---------------------------------------------------------------------S----------
-------S------------------------------------------------------------------------
----------------------------------------------------------------SSSS---------S--
-------------------S--------------S---S-----------------------------------------
----------------------------------------------------SSSS------------------------
------------------------------------------------------S---------------S---------
----------------------------------------------------S---------------------------
-----------------------------------------------------------------------S--------
------------------------S-------------------------------------------------------
---------------------------------------------------------------SS--S----------S-
------S-----------S---------S-----------S---------------------------------------
S------------------------------------------S------------S--S------------------S-
--S----------------S-SSS-----------------------------SS-----------------------S-
---S------------S--------------------S----S-------S-----------------------------
--------S-----------------------------SSS----------S-------------S---SSSSSSS-SSS
SSSSS----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_592
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------------CCTCAGCTAGTGCACACCAA------------------------------------------------
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>reverse_2115
--------------------------------------------------------------------------------
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----------------------------------AACGCCTCCAAGCATCAAGA--------------------------
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