>input_sequence_66968
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------------------------------------------------------------ATGAGGACGGTCGCCGCAGA
ATTCGACTCTGGCGACCGAACGTGCTTCGGCCATCCCGAGTGCATGAAGAAGAGCAAGCTCGAGGTGTCGCCTTACCTTC
ACAG---CGATCGCCTCACAATTGAGTGTGCCATCACTATCTGCACGGAAGCGCCC---------AAATCGTTTGCTGAG
GTGCCGTTGCCGCCATCCGACATCACGGATCACCTCAGGAAGTTGTGGCAACGGAAAGAGGGAAGCGATGTCACCTTCGA
GGTTCAAGGGGAGGCTTTTCCTGCGCACAAGATAGTGCTCGCGATGCGGTCGCCGGTGTTTAAGGAAGAGTTGTACGGTG
CCTTGAGGGAAAATGATATGGGTTGTGTTATCATCGGCGACATGCAACCTCTAGTCTTCGAGGCCCTGCTCCATTTTATA
TACACCGATTCGTTGCCCACCATGGATGATCTTTACCAATATCAAGATGAGTACAAAGAGATTATTGGACATTTGCTTGT
AGCCGCGGATCGGTATGCCATGGAAAGACTGAAGATCATATGTGAAAGCATCCTTTGCAAGAACATAGATGTGAAGACCG
TGGTGACTACACTGGTTTTGGCTGATCAGCATCACTACAACAAGTTGACTGATGCTTGCATTGAATTTATTGCCTCTTTG
GGTAAAGTGGATGATATAATAGCAAGCCATGGATATGCTGAGCTCAAAAGAACCTGTCCTTTGGCTTTACTGGAACTGTG
GAAGAAGGCAACTAGGCTCTACATGATATAGTCTTCATTTCACATTGGCATGCATGTTAAATCACATACATATCTTGCTA
CTTGTTTGATGAAGGATTAGTTTATTTGAATATATCTGAAGCTTCGGTGA------------------------------
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-----------------------------
>chr3A_1_TraesCS3A01G164400
AAAAAATACACAACTTCTCAGAACTTGTACCGTATTTTAAAAAATGTTCATGTTTTCATTTTTTGGAGTTTCCAAAAATG
TTCCCGTTTAAAAATGTTCACAAATTTCAAATAAATGTTCGTGTTTTCAAATTTGTTCAGGAGTTTAAAGAATGTTTGCA
TTTGCCCAATTTTCTTTTGGAATTTCAAAAATTGTTCCTGTTTTGGGAAAAATTGTTTGTGATTTCGAAAAATGTTCCTG
CTTTTCTAAAAGAAATCATTTTTTAAGCAATTCCCCAATTTGAAAAGTGTTTGCATTCAGAAAACACCTAGTTTAAAATA
ATCTTTTAAAATGCTGAAAGTAATTCGGATCTGCTGTGTGGGGTTGATTCTTAAAAACGGACGCTGCAAACTTGTCGGTA
ACGCGTGATAGGTCAGTCGGTGGCCGCGCCTGATCTGTATCATGATGTACGAGGTTCGGTTCCCAGCTACGTCCAGAGAG
CGGCGTATAGGACGTCCCACGATTTGATTCGGTCCTAAGGAGGAATTCGACTTGGATTCCTGGGCCCGATTTTAGAGAGT
ATAGCGAAGCGCGTTCCGCTTCCCGGCCCAACCCTCTTTCCTTTCGCTTCCCGGTCCAACCCTCCATACAAATGCAAA-C
CCTAATAAGAAACCCTAATAAACTCTTCTCCCCCGCCACCGGCCACCACCCCGGCCACGAACAAGACAACCGGGCA----
---------------ACGGAGGCGGCGATGGGATGCACGGCGTCCACGTGACGTGCAGGGCGGGGCTCGCTCGTGTTCGA
GGTCTCAGGGTACGGCCGAGTTAGCCTCGACGTACAATCATCGGAAGTATTCACCGTCGGCTCTTACAACTGGCAGATTC
GTTTCTATGAGGAAGGAGTGCTTGGGCATTCCGGAGGCTATGTGGCGGTCTATCTCTTTTTAGTCAGCAAGAAGGCCAAG
GTGAGGGCAACCTTCGAGCTCAGTTTGGTGGACATCACAGGATCAACGCCGCCTCGTACGATGAGGACGGTCGCCGCAGA
ATTCGACTCTGGCGACCGAACGTGCTTCGGCCATCCCGAGTGCATGAAGAAGAGCAAGCTCGAGGTGTCGCCTTACCTTC
ACAG---CGATCGCCTCACAATTGAGTGTGCCATCACTATCTGCACGGAAGCGCCC---------AAATCGTTTGCTGAG
GTGCCGTTGCCGCCATCCGACATCACGGATCACCTCAGGAAGTTGTGGCAACGGAAAGAGGGAAGCGATGTCACCTTCGA
GGTTCAAGGGGAGGCTTTTCCTGCGCACAAGATAGTGCTCGCGATGCGGTCGCCGGTGTTTAAGGAAGAGTTGTACGGTG
CCTTGAGGGAAAATGATATGGGTTGTGTTATCATCGGCGACATGCAACCTCTAGTCTTCGAGGCCCTGCTCCATTTTATA
TACACCGATTCGTTGCCCACCATGGATGATCTTTACCAATATCAAGATGAGTACAAAGAGATTATTGGACATTTGCTTGT
AGCCGCGGATCGGTATGCCATGGAAAGACTGAAGATCATATGTGAAAGCATCCTTTGCAAGAACATAGATGTGAAGACCG
TGGTGACTACACTGGTTTTGGCTGATCAGCATCACTACAACAAGTTGACTGATGCTTGCATTGAATTTATTGCCTCTTTG
GGTAAAGTGGATGATATAATAGCAAGCCATGGATATGCTGAGCTCAAAAGAACCTGTCCTTTGGCTTTACTGGAACTGTG
GAAGAAGGCAACTAGGCTCTACATGATATAGTCTTCATTTCACATTGGCATGCATGTTAAATCACATACATATCTTGCTA
CTTGTTTGATGAAGGATTAGTTTATTTGAATATATCTGAAGCTTCGGTGAAG-ACAGTATTACTCTGCTAATGTTTTTCG
TTTGTCAAGATGTTGGATACTTATCCTTTACTGAAAAAGATTTTCGCCCCGCTTTATATTATAAAGCAACTGCCCAAGCC
AAACATCCAACAAGGTTCACACACACACAC--A----AAGGTCTAGTACAGTCAAGTAGTCAAAGGTTTAATGCTGAGGG
CACAGCTCAACAAGCCCTAAAGAAACAAAATA-GCACGCACACGCAGGGTGCGGCAGAGCATCTAGTCGGGCTCC--GGG
G--GG----CGGAGGGAGCGGAGGCGCCAAGCGGAAGGCCATCGATCGAAGGCCAGCGAGGAGGTTGTTGATGACGTCCC
AATCCTGGGGGCGGCTAAGCGGTCGCCAGAGCTGCAAGTATCCACACATTTTAAAGATGGCGTCAGTAGCACGTCGAAGA
GGCACCTTCTGTATGACAAGCTTATTGTGAACGGTCCAAAGTGTCCAGGCAAGGACCTTAATGCAAAGCCATCTATTATG
GCGGTAGCGAGGGGGG-AGGCGTGAATTTCCGCAAGCA-GGTCAGGGAAGTTGGTGTTGCACCACTGGCCCCCAACCGTC
TCGCGGAAACAGGACCAAAGGAACTGAGCCGTGGAGCACGAGAAGAAGATGTGGTTAGCATCCTCCACCATGTCGCACAT
GGGGCACATCCCATCCCCAGGTCCATTACTCTTAAGGACCTCCACACCAGACGGGAGGCGGCCTCGGATCCATTGCCACA
GGAAGATCTTGATCTTCAGGGGCAGGCGGACGTCCCAAATCAAACTAAAGGGCTCGGGGGCCATCGAGGGGGCGATGGCC
GCGTAGAGGGATTTGGTGGAGAAGTAGCCGGAAGGTTTCAGACGCCAAGAGATGGCGTCCGGGGTGACAACACCGTCCAT
AGGGAGGAGGGCGATGTCCTGAAGGAGGGCATCCCAAGAGGCAACTTT-AGGAGGGCCAAAGGGGCGGCGGAAAGCGAGG
CGCCCTAAGTCAATAAGGGTCGTCTCGAC
>chr3D_489
AGGACGTCGAG---------------------------------------------------------------------
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------------------ACCATTTGATTCGTCCAGGAGGAGGAATTGGACTCGGATTCCTGGGCCCGATTTTAGAGAGG
AAG--GAAGCGCGTTCCGCTTCCCGGCCCAACCCTCTTTCCTTCCGCTTCCCGGCCCAACCCTCCATACAAATGCAAAAC
CCTAATAAGAAACCCTAAGAAACCCTTCTCCCCCGCCACCGGCCACCACCCCGAC-------------------CA----
---------------ACGGAGGCAGCGATGGGATGCACGGCGTCCACGCGACGTGCGGGGTGGGGCTCGCTCGTGTTCGA
TGTCTCAGGGTACGGCGGAGTTAGCCTCGACGTACAATCATCAGAAGTATTCACCGTCGGCGCTTACGACTGGCAGATTC
GTTTCTATGAGGAAGGAGTGTTTGGGCATTCCGGAGGCTATGTGGCGGTCTATCTCTTTTTAGTCAGCAAGAAGGCCAAG
GTGAGGGCAACATTCGAGCTCAGTTTGGTGGACATCACTGGATCAACGCCGCCTCGTACGATGAGGACGGTCGACGCAGA
ATTTGACTCTGGCGACCGAACGTGCTTCGGCCATCCCGAGTTCATGAGGAAGAGCGAGCTCGAGGCGTCGCCTTACCTTC
GCGG---CGATCGCCTCACAATTGAGTGTGCCATCACTATCTGCAAGGAAGCGCCGGTCTCGTCGAAATCGTTTGCTGAG
GTGCC------GCCATCCGACATCACGGATCACCTCAGGAAGCTGTGGCAAGGGAAAGAGGGCAGCGATGTCACCTTCGA
GGTTCAAGGGGAGGCTTTTCCTGCCCACAAGACGGTGCTCGCGATGCGGTCGCCGGTGTTTAAGGCAGAGCTGTACGGTG
CCTTGAGGGAAAATGATATGGGTCGCGTTATCATTGGCGACATGCAACCTGCAGTCTTCGAGGCCCTGCTCCATTTTATA
TACACCGATTCATTGCCCACCATGGATGATCTTTACCAAGATCAAGATGAATACAAAGAGATTATTGGACATTTGCTTGT
AGCCGCGGATCGGTATGCCATGGAAAGACTGAAGATCATATGTGAAAGCATCCTTTGCAAGAACATAGATGTGAAGACCG
TGGTGACTACACTGGCTTTGGCTGATCAGCATCACTGCAACAAGTTGACTGATGCTTGCATTGAATTTATTGCCTCTTTG
GGTAAAGTGGATGATATAATAGCAAGCCAGGGATATGCTGAGCTCAAAAGAACCTGTCCTTTGGCTTTACTGGAACTGTG
GGAGAAGGCAACTAGGCTCTACATGATATAGTCTTCATTTCACATTGGCATGCGTGTTAAGTCGCATACATATCTTGCTA
CTTGTTTGATGAAGGATTAGTTTATTTTAATATATATGGAGCTTCGGTGAAAAACAGTACTACTCTGCTAATGTTTTTCA
TTTGCCAAGATGTTGCATACTTATCCTTT---------------------------------------------------
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>chr3B_529
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------------------------------------------------GACTCGGATTCCTGGGCCCGATTTTAGAGAGG
ATAGCGAAGCGCGTTCCGCTTCCCGGCCCAACCCTCTTTCCTTCCGCTTCTCGG-CCCACCCTCCATACAAATGGAAAAC
CCTAATAAGAAACCCTAAGAAACCCTTCTCCCCCGCCACCGGCCACCACCCCGAC-------------------CACGAG
CAAGACAACCGGACAACGGAAGCGGCGATGGGATGCACGGCGTCCACGCGACGTGCGGGGCGGGGCTCGCTCGTGTTCGA
GGTCTCAGGGTACGGCGGAGTTAGCCTCGACGTACAATCATCGGAAGTATTCACCGTCGGCGCTTACGACTGGCAGATTC
GTTTCTATGAGGAAGGAGTGTTTGGGCATTCCGGAGGCTATGTGGCGGTCTATCTCTTTTTAGTCAGCAAGAAGGCCAAG
GTGAGGGCAACCTTCGAGCTCAGTTTGGTGGACATCACTGGATCAACGCCGCCTCGTACGATGAGGACGGTCGCCGCAGA
ATTCGACTCTGGCGACCGGACGTGCTTCGGCCATCCCGAGTTCATGAGGAAGAGCGACCTCGAGGCGTCGCCTTACCTTC
GCGGCGGCGATCGCCTCACAATTGAGTGTACCATCACTATCTGCACGGAAGCGCCC---------AAATCATTTGTTGAG
GTGCCGTTGCCGCCATCCGACATCACGGATCACCTCAGGAAGCTGTGGCAAGGGAAAGAGGGCACCGATGTCACCTTCGA
GGTTCAAGGGGAGGCTTTTCCTGCCCACAAGACAGTGCTCGCGATGCGGTCACCGGTGTTTAAGGCAGAGTTGTACGGTG
CCTTGAGGGAAAATGATATGGGTCGCGTTATCATCGGCGACATGCAACCTGCAGTCTTCGAGGCCCTGCTCCATTTTATA
TACACCGATTCGTTGCCCACCATGCATGATCTTTACCAAGATCAAGATGAGTACAAAGAGATTATTGGACATTTGCTTGT
AGCCGCGGATCGCTATGCCATGGAAAGACTGAAGATCATATGTGAAAGCATCCTTTGCAAGAACATAGATTCGAAGACCG
TGGTGACTACACTGCCTTTGGCTGATCAGCATCACTGCAACAAGTTGACTGATGCTTGCATTGAATTTATTGCCTCTTTG
GGTAAAGTGGATGATATAATAGCAAGCCAGGGATATGATGAGCTCAAAAGAACCTGTCCTTTGGCTTTACTGGAACTGTG
GGAGAAGGCAACTAGGCTGTACATGATATAGTCTTCATTTCACATTGGCATGTGTGTTAAGTCACATACATATCTTGCTA
CTTGTTTGATGAAGGATTAGTTTATTTTAATATATCTGAAGCTTTGGTGGAAAACAGTATTACTCTGCTAATGTTTTTCG
TTTGTCAAGATGTTGCATACTTATCCTTT---------------------------------------------------
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>chr3A_1914
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--------------------------TTTACCGAAAAAGGCTTTCACCCCGCTTTATATTATAAAGCAAATGCCCAAGCC
AAACATCCAACAAGGTTCACACACACACACACACA--CAGGTCTAGCACAGACAAGCAGTCAAAGGGTTAATGCTGAGGG
CACAGCTCAACAAGCCCTGAAGAAACAAAAAA-GAACGCACGCGCGGGGTGCGGCATAGCATCTAGTCGGGCTCC--GGG
GAGGG----CGGAGGGAGCGGAGGCGCCAAGCGGAAGGCCATCGATCGAAGGTCAGCGAGGGGTCTGCTGATGACGTCCC
GGTCCTGGGGGCGGCTAAGCGGCCGCCTGAGCTGCAAATATCCACACCTTTTAAAGATGGCGTCAGTAGCACGTCGAAGA
GGCACCTTCTGTATGACAAGCTTATTGCGTACGGTCCAAAGCGTCCAGGCAAGGACCCCAACGCAAAGCCATCTAATATG
CCTGTAGCGAGGGGG--AGGCCGGAATCTCCGTAAGCA-GGTCAGGGAAGTTGGTGTTGCACCACTGGCCCCCAACCGTC
TCGCGGAAACAGGACCAAAGGAACTGTGCCGTGGAGCACGAGAAGAAGATGTGGTTGGCATCCTCCACCGTGCCGCACAT
GGGGCACATCCCATCCCCAGGCCCATTACGCTTAAGGACCTCTACGCCGGACGGGAGGCGGCCTCAGATCCATTGCCACA
GGAAGATCCTGATCTTCAGGGGCAGGCGGATGTCCCAGATCAAACTGAAGGGCTCGGGGGCCGTCGAGGGGGCGATGGCC
GCGTAGAGGGATTTGGTGGAGAAGCAGCCGGAAGGTTCCAGGTGCCAAGAGATAGCGTCCGGGGTGTCGGAGACGTCCAT
AGGGAGGAGGGCGATGTCCTGGAGGAGGACATCCCAAGCGGCTACTTCAAGGGGGGCCAAAGGGGCGGCGGAAAGTGAGG
CGCCCTAGGTCAATAAGGGCCATCTCGAC
>chr5D_1914
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--------------------------TTTATCGAAAAAGGCTTTCGCCCCGCTTTATAG-ATAAAGCAACTGCCCAAGCC
AAACATCCAACAAGGTTCACACACACACAC--A----AAGGTCTAGTACAGACAATAAGTCATAGGGTTAATGCTGAGGG
CACAGCTCAACAAGCCCCGAAGAAACAAAAAA---GCGCACACACGGGGTGCGG-AGAGCATCTAGTCGGGCTCC--GGA
GGTGG----CGGGGGGAGCGGAGGCGCCAAGCAGAAGGCCATCGATCAAAGGTCGGCGAGGAGGTTGTTGATGACGTCCC
GATCCTGGGGGCAACTAAGCGGCCGCCAGAGCTGCAAGTATCCACACATTTTAAAGATGGCATCAGTAGCACGTCGAAGA
GGGACCTTCTGTATGACAAGCTTATTGCGAACGGTCCAAAGCGTCCAGGCAAGGACCCCAACGCAAAGCCATCTAATATG
GCGGTAGCGAGGGGGG-AGGCGTGAATTTCTGCAAGCA-GGTCAGGGAAGTTGGTGTTACACCACTGACCCCCAACCGTC
TCGCGGAAACAGGACGAAAGGAACTGAGCTGTGGAGCACGAGAAGAAGATGTGGTTAGCATCTTCCACCGTGCCGCACAA
GGGGCACATCCCATCCCCAGGTCCATTACGCTTAAGGACCTCCACGCCAGACGGGAGGCGGCCGCGAATCCATTGCCACA
GGAAGATCCTGATCTTCAGGGGCAGGCGGATGTCCCAAATCAAACTAAAGGGCTCGGGGGCCGTCGAGGGGGCGATGGCC
GCGTAAAGGGATTTGGTGGAGAAGCAGCCGGAAGGCTCCAGACGCCAAGAGGTGGCATCCGGGGTGTCGACGCTGTCTAT
AGGTAGGAGGGAGATGTCCTGAAGGAGGGCATCCCAAGCGGCAACTTC-AGGTGGGCCAAAGGGGCGGCGGAAAGTGAGG
CGCCCTAAGTCAATAAGGGCCGTCTC---
>chr2D_1915
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---------------------------TTACCGAAAAAGGCATTCGCCCCGCTTTATAG-ATAAAGCAACTGCCCAAGCC
AAACATCCAACAAGGTTCACACACACACAC--ACA--AAGGTCTAGCACAGACAAGTAGTCAAAGGGTTAATGCTGAGGG
CACAGCTCAACAAGCCCTAAAGAAACAAAAAA--CACGCACACGCGGGGTGTGGCAGAGCATCTAGTTGGGCTCC--GGG
GGTGG----CAGGGGGAGCGGAGGCGCCAAGCAGAAGGCTATCGATCGAAGGTCGGCGATGTGGTTGTTCATGACGTCCC
GATCCTGGGGGCGGCTAAGCGGCCGCCAAAGCTGCAAGTATCCACACATTTTAAAGATGGCGTCAGTAGCACGTCGAAGA
GGGACCTTCTGTATGACAAGCTTATTGCGAACGGTCCAAAGCGTCTAGGCAAGGAACCCAACGCAGAGCCATCTAATATG
GCGGTAGCAAGGGGGG-AGGCGTGAATTTCCGCAAGCA-GGTCAGGGAAGTTGGTGTTACACCACTGGGCCCCAACCATC
TCGTGGAAACAAGACCAAAGGAACTGAGCCGTGGAGCACGAGAAGAAGATGTGGTTAGCATCTTCCACCGTGCCGCACAA
GGGGCACATCCCATCCCCAGGTCCATTACGTTTAAGGACCTCCACGCCGGACGGGAGGCGGCCGCGGATGCATTGCCACA
GGAAGATCCTGATCTTCAGGGGCAGGCGGATGTCCCAAATCAAACTAAAGGGCTCGGGGGCCGTCGAGGGGGCGATGGCC
GCGTAGAGGGATTTGGTGGAGAAGCAGTCGGAAGGCTCTAGACGCCAAGAGGTGGCATCCGGGGTGTCGACGCCGTCCAT
AGAGAGGAGGGCGATGTCCTGAAGGAGGGCGTCCCAAGCGGCAACTTC-AGGTGGGCCAAAGGGGCGGCGGAAAGCGAGG
CGCCCTAAGTCAATAAGGGTCGTCT----
>chr7D_1915
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---------------------------TTACCGAAAAAGGCTTTCGCCCCGCTTTATATTATAAAGCAACTGCCCAAGCC
AAACATCCAATAAGATTCACACACACACAA--ACACAAAGGTCTAGCACACAAGA-TAGTCAAAGGGTTAATGCTGAGGG
CACAGCTCAACAAGCCTTGAAAATCAG--AAAAGCACGCACACACGGGGTGCAACAGAGCAGCTAGTCGGGCTCC--GGG
GGCGG----CGGTGGGAGCGGGGGCGCCAAGCGGAAGGCCATCGATTGAAGGTCGGCGAGGAGAGTGTTGATGACGTCCC
GATCCTGGGGGCGGCTAAGCGGCCGCCAAAGCTGCAAGTATCCACACATTTTAAAGATTGCGTCAGTAGCACGTCGAAGA
GGCACCTTCTGGATGACAAGCTTATTGCGGACGGTCCAAAGCGTCCAGACAAGGACCCCAACGCATAGCCATCTAATATG
GCGGTAGCGAGGGGGG-AGGCGTGAACCTCCGCAAGCA-GGTCAGGGAAGTTGGTGTTGCACCACTGGCCTCCAACCGTC
TCGCGGAAACAGGACCAAAGAAACTGGGCCGTGGAGCACGAGAAGCAGATGTGGTTAGCATCCTCCACCGTGCCGCACAG
GGGACACATCCCATCTCCAGGTCCATTACGCTTAAGGACCTCCACGCCGGACGGGAGGCGGCCGCGGATCCATTGCCATA
GGAATATCCTGATTTTCAGGGGCAAGCGGATGTCCCAAATCAAGCTAAAGGGCTCGGGGGCCGTCGAGGGGGCGATGGCC
GCGTAGAGGGATTTGGTGGAGAAGCAGCCGGATGGCTCCAGTCGCCAAGAGATGGCGTCCGGGGTGTTGGCGACGTTCAT
CGGGAGGAGGGCGATGTCCTGGAGGAGGGCATCCCAAGCGGCCACTTC-CGGCGGGCCAAAGGGGCGGCAGAAGGCGAGG
CGCCCTAAGTCAATAAGGGCCGTCTCGAC
>chr4D_1916
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----------------------------TACCGAAAAAGGCTTTCGCCCCGCTTTATAG-ATAAAGCAACTGCCCAAGCC
AAACATCCAACAAGGTTCACACACACACAC--AGACAAAGGTCTAGTACATACAAGAAGTCATTGGGTTAATGCTGAGGG
CACAGCTCAACAAGCCCTGAAGAAACAGAAAA--CGCGCACACGCGGGGTGCGG-AGAGCATCTAGTCGGGCTCC--GGA
GGTGG----CGGGGGGAGCGGAGGCGCCAAGCGGAAGGCCATCGATCGAAGGTCGGCGAGGAGGTTGTTGATGACGTCCC
GATCCTGGGGGCGGCTAAGCGGCCGCCAGAGCTGCAAGTATCCACACATTTTAAAGATGGCGTCAGTAGCACGTCGAAGA
GGGACCTTCTGTATGACAAGCTTATTGCGAACGGTCCAAAGCGTCCAGGCAAGGACCCCAACGCAAAGCCATCTAATATG
GCGGTAGCGAGGGGGG-AGGCGTGAATTTCCGCAAGCA-GGTCAGGGAAGTTGGTGTTACACCACTGACCCCCAACCGTC
TCGCGGAAACAAGACCAAAGGAACTGAGCCGTGGAGCACGAGAAGAAGATGTGGTTAGCATCTTCCACCGTGCCGCACAA
GGGGCACATCCCATCCCCAGGTCCATTACGCTTAAGGACCTCCACGCCAGACGGGAGGCGGCCGCGAATCCATTGCCACA
GGAAGATCCTGATCTTCAGGGGCAGGCGGATGTCCCAAATCAAACTAAAGGGCTCGGGGGTCGTCGAGGGGGCGATGGCC
GCGTAGAGGGATTTGGTGGAGAAGCAGCCGGAAGGCTCCAGACGCCAAGAGGTGGCATCCGGGGTGTCGACGCCGTCTAT
AGGTAGGAGGGCGATGTCCTGAAGGAGGGCATCCCAAGCGGCAACTTC-AGGTGGGCCAAAGGGGCGGCGGAAAGCGAGG
CGCCCTAAGTCAATAAGGGCCGTCTCAAC
>chr1A_1916
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----------------------------TACCGAAAAAGGCTTTCGCCCCGCTTTATATTATAAAGCAAATGCCGAAGCC
-AACATCCAACAAGGTTCAAACACACACAC--ACACAAGGTCCAG--ACAGACAAGTAGTCAAAGGGTTAATGCTGAGGG
CACAGCTCAACAAGCCCTGAAAAAACACAAAA-GAGCGCACGCGCCGGGTGCGACACAGCATCTAGTCGGGCTCC--GGG
GGTGG----CGGAGGGAGCGGAGGCGCCAAGCGGAAGGCCATCGATCGAAGGTCGGCGAGGAGGGTGCTGATGACGTCCC
GGTCCTGGGGGCGGCTAAGCTGCCGCCAGAGCTGCAAATAACCACACATTTTAAAAATGGAGTCAGTAGCACACCGAAGA
GGCACCTTCTGTATGACAAGCTTATTGCGTACGGTCCATAGCGTCCAGGCAAGGACCCCAATGCAAAGCCATCTAATATG
CCTGTAGCGAGGGGGGGAGGCCTGAATTTCCGCAAGCA-GATCAGGGAAGTTGGTGTTGCACCACTGGCCCCCAACCATT
TCGCGGAAACAGGACCAAAGGAACTGTGCCATGTAGCACGAGAAGAAGATGTGGTTGGCATCCTCTACCGTGCCGCACAT
GGGGCACATCCCATCTCCAGGTCCATGACGCTTAAGGACCTTTACGCCGGACGGGAGGCGGCCGCGGATCCATTGCCACA
GGAAGATCCTGATCTTCAGGGGCAGGCGGATGTCCCAGATCAAACTGAAGGGCTCGGGGGCCATCGATGGGGCGATAGCC
GCGTAGAGGGATTTGGTGGAGAAGCAGCTGGAGGGTTCCAGACGCCAAGAGATGGCGTCCGGGGTGTCGGTGACGTCCAT
AGGGAGAAGGGCGATGTCCTGGAGGAGGACATCCCAAGCTGCAACCTC-AGGGGGGCCAAAGGGGCGGCGGAAAGCGAGG
CGCCCTAAGTCAATAAGGGCCGCCTCGAC
>chr3A_1920
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--------------------------------GAAAAAGGCTTTCGCCCCGCTTTATATTATAAAGCAACTGCCCAAGCC
AAACATCCAACAAGGTTCACACACACACAA--A------GGTCTGGTACAGACAAGTAGTCGAAGGGTTAATGCTGAGGG
CACAGCTCAACAAGCCCTGAAGAAACAAAAAAAGCACGCACACGCGGGGTGCTGCAGAGCATCTAGTCGGGCTC-----G
GGGGG----GGGGGGGAGCGGAGGCGCCAAGCGGAAGGCCATCGATCGAAGGTCGGCGAGGAGGTTGTTGATGACGTCCC
GATCCTGGAGGCGGCTAAGCGGCCGCCAGAGCTGCAAGTATCCACACATTTTAAAGATGGTGTCAGTAGCACGTCGAAGA
GGCACCTTCTGTATGACAAGCTTATTGCGAACGGTCCAAAGCGTCCAGGCAAGGACCCCAACGCAAAGCCATCTAATATG
GCGGTAGCGAGGGGGG-AGGCGTGAAATTCCGCAAGCAGGATCAGGGAAGTTGGTGTTGCACCACTGGCCCCCAACCGTC
TCGCGGAAACAGGACCAAAGGAACTAAGCCGTGGAGCATGAGAAGAAGATGTGGTTAGCATCCTCCCCCGTGCTGCACAT
GGGGCACATCCCATCCCCAGGTCCATTACGCTTAAGGACCTCCACGCCGAACGGGAGGCGGCCTCAAATCCATTGCCACA
GGAAGATCCTTATCTTCAGGGGCAGGCGGATGTCCCAAATCAAACTAAAGGGCTCGGGGGCCGTCGAGGGAGCAATGGCC
GTGTACAGGAATTTGGTGGAGAAGTAGCCGGAAGGTTCCAGACGCCAAGAGATGGCGTCCGGGGTGACGGCGCCGTCCAT
AGGGAGGA-GGCGATTTCCTGAAGGAGGGCATCCCAAGCGGCAACTTT-AGGTGGGCCAAAGGGGCGGCAGAAAGCGAGG
CGCCCTAAGTCAATAAGGGCCGTCTCGAC
>chr2D_1920
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--------------------------------GAAAAAGGCTTTCGCCCCGCTTTAGATTATAAAGCAACTGCCCAAGAC
ATACATCCAACAAGGTTCACACACGCACAC--ACACACA--------ACAGACAAGTAGTCAAAGGGTACATGCTGAGGG
CACAGCTCAACAAGCCCTGAAGAAACAAAAAGAGCACGCACACGCGGGGTGCGGCATAGCATCTAGTCGGGCTCGGGGGG
GGGGG----CGGAGGGAGCGGAGGCGCCAAGCGGAAGGCCATCGATCAAAGGTCGTCAAGGAGGTTGTTGATGACGTCCC
GATTCTGGGGGCGGCTAAGCGGCCGCCAGAGCTGCAAGTATCCACACATTTTAAAGATGGCGTCAGTAGCACGTCGAAGA
GGGACCTTCTGTATGACAAGCTTATTGTGAACTGTCCAAAGCGTCCAGGCAAGGACCCCAACGCAAAACCATCTAATATG
GGGGTAGCGAGGGGG--AGGCGTGAATTTCCGCAAGCA-GGTCAGGGAAGTTGGTGTTGCACCACTGGCCCCCAACCGTC
TCGCGGAAACAGGACCAAAGGAACTGAGCCGTGGAGCACGAGAAGAAGATGTGGTTAGCATCCTCCACCGTGCCGCACAA
GGGGCACATCCCATCCCCAGGTCCATTATGCTTAAGGACCTCCACGCCGGACGGGAGGCGGCCTCGGATCCATTGCCACA
GGAAGATCCTGATCTTCAGGGCCAGGCGGATGTCCTAAATCAAACTAAAGGGCTCGGGGGCCGTCGAGGGGGCGATGGCC
GCGTAAAGGGATTTGGTGGAGAAGCAGCCGAAAGGTTCCAGACGCCAAGAGGTGGCGTCTGGGGAGTCGACGCCGTCCAT
AGGGAGGAGGGCGATGTCCTGAAGGAGGGCATCCCAAGCGGCAACTTC-GGGTGGGCCAAAGGGGCGGCGGAAAGCGAGG
CGCCCTAAGTTAACAAGGGCCGTCTCGAC
>chr1D_1921
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---------------------------------AAAAAGGCTTTCGCCCCGCTTTATAG-ATAAAGCAACTGCCCAAGCC
AAACATCCAACAAGGTTCACACACACACAC--A----AAGGTCTAGTACAGGCAATAAGTCAAAGGGTTAATGCTGAGGG
CACAGC-CAACAAGCCCTGAAGAAACAGAAAA--CGCGCACACGCGGGGTGCGG-AAATCATCTAGTCGGGCTC-----C
GGAGGTGGCGGGGGGGAGCGGAGGCGCCAGGCGGGAGGCCATCGATCGAAGGTCGGCGAGGAGGTTGTTGATGATGTCCC
GATCCTGGGGGCGGCTAAGCGGCCGCCAGAGCTGCAAGTATCCACACATTTTAAAGATGGCGTCAGTAGCACGTCGAAGA
GGGACCTTCTGTATGACAAGCTTATTGCGAACGGTCCAAAGTGTCCAGGCGAGGACCCCAACGCAAAGCCATCTAATATG
GCGGTAGCGAGGGGGG-AGGCGTGAATTTCCGCAAACA-GGTCAGGGAAGTTAGTGTTACACCACTGTCCCCCAACCGTC
TCGCGGAAATAGGACCAAAGGAACTGAGCCGTGGAGCACGAGAAGAAGATGTGGTTAGCATCTTCTACCATGCCGCACAA
GGGGCACATCCCATCCCCAGGTCCATTACGCTTAAGGACCTCCACGCTAGACGGGAGGCGGCCGCGAATCCATTGCCACA
GGAAGATCCTGATCTTCAGGGGTAGGCGGATGTCCCAAATCAAACTAAAGGGCTCGGGGGCCGGCGAGGGGGCGATGGTA
GAGTAGAGGGATTTGGTGGAGAAGCAGCCGGAAGGCTCCAAACGCCAAGAAGTGGCATCCGGGGTGTCGACGCCGTTGAT
AGGTAGGAGGGCGATGACCTGAAGGAGGGCATCCCAAGCGGCAACTTC-AGGTGGGCCAAAGGGGCAACGGAAAGCGAGG
CGCCCTAAGTCAATAAGGGCCGTCTCAAC
>SNPs
-SS-SS-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS--S----------SS-SSS----------S----S--------------------------S
-------------------------------------------S----------S-------------------------
------------------S----S-----------------------------S-SSSSSSSSSSSSSSSSSSS------
------------------------------------------------S-------S-----------------------
----------------S--------------------------------------------S-----S------------
--------------------S-----------------------------------------------------------
--------------------------------------S-----------------------------------------
-----------------------------------------S-----S-------S---------S--------------
S-S-----------------------------------------------------------------------------
------------------------------------------S--------S----------S-----------------
------------------------S-------S--------------------------------S--------------
-----------------------S-S------------------------SS----------------------------
---------------------------------------S----------------------------------------
--------------------------------------------------------------------------------
---------------S--------------------S-------------------------------------------
-----------------------------S--------------------------------------------------
-S---------------------------------------------------S------S-------------------
---------------------------S-----------------------S----------------------------
---------------S---------------S-------SS---------------------------------------
---------------------------------------------------S--------------S-------------
------------------------------S--------------S----------------------------------
----------------------------------------------------S---------------------------
S---------------------S---------------------------------------------------------
---------------------------------------------------------SS----------------S----
--------------------------------------------------------------------------------
------------------------------------------------------------------------S-------
-----------------------------S---------------S----------------------------------
--------S---------------------S-------------------------------------------------
-------------------------------------S------------------------------S--S--------
--------------------------------------S-------------S---------------------------
-----------------------------
>forward_367
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------GATCTGCTGTGTGGGGTTGA---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>reverse_2213
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------CCAGCGAGGAGGTTGTTGAT--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
