>input_sequence_66946
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-------------------------------------ATGCCGGGAGCCGTGAAGGTGTTCGGGTCGCCGACGTCGTCGG
AGGTCGCCCGCGTCCTGGCGTGCCTCTTCGAGAAGGATGTCGAGTTCCAGCTCATCCGCGTCGACTCCTTCCGCGGCCCC
AACCGCATGCCCCAGTACCTCAAGCTGCAGCCGCACGGCGAGGCGCTCACCTTCGAGGACGGCAGCGTCACCCTCGTCGG
TAAGCAACACAACAAACAATGTCCGTAGATTTTCATCTGTATGATTCACACTTAGTATATGTTGATGATATGTGCGGATG
ATGCGCGTGGGTGCAGAGTCGAGGAAGATCCTGAGGCACATCGCCGACAAGTACAAGAGGCAGGGGAACCTGGACCTCAT
CGGGACGGGGGCGCTGGAGCGCTCGTCAATCGAGCAGTGGCTGCAGACGGAGGCGCAGAGCTTCGACGTGCCCAGCGCCG
ACATGATCTACAGCCTCGCCTACCTGCCGCGCACCATGCCGCTCGACGGGAGGAATGACGG------CGGCGCCGGCAGG
C---------------------AGCAGAAGCAGCAGCGGGACATGATGATGAGCCCGTCCCACATGCAGAAGGTGGAGGA
GATGAAGCAGCTGTTCGAGAAGAGCAGCAGGGATCTGAGCAAGGTGCTGGACATCTACGACCAGCGGCTTGAGGAGGCCG
AGTACCTCGCCGGCGACAAGTTCACCCTTGCTGACCTCTCCCACATGCCCAACGCCGACCGCCTCGCCTCCGACGAGCGC
TCTGCCCGCCTCATCCAGTCCCGCAGGAACGTCAGTCGCTGGTGGGCCGACGTCTCGAGCCGCGAGTCCTGGGTGTACGT
CAAGAGCCTGCAGCGCCCGCCGTCCGCCGAGGCGCCATTCTGA-------------------------------------
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>chr1D_1_TraesCS1D01G207400
CCCAGAAACATAAATATATTTGCCTGAAAAAACACGCACATAGAATCTTATACACACGCACAC------TCTATGAGCGC
GTTCGAGATATCGAGC-----------CTTGAGATTGATGAAGTTACCACAGATGCTTTCATAGTCGACGGAAACGTCTC
CTTCTACCGAAGAAACATCGCCGAAAAGTCTGAAA-AAATTTCAGAAAAATGTG-ACCCTAGTATCAAGTCTAAAACTTA
AATCTTGAT---GGGATGGTTCCAGCAAAAAAGAAAAACTTAACCCCAGTTCACATGGTCAGGCCTTTCGTCGGACTGCA
GATCCACGGAAAGAGTAAAGAGCTATCAAACATCAGTCAGTAGTCAGTACAGTACAACGATGATGCTTTACCTTGATGGA
CGCCACTGCATCTGATACTAAAAATCTGTCCGCGTGCATACAGATTCAGTACCTATGCTACTCACTCAACGAATATATTC
AGAACTTCCAACAATAGGATTAGTATAACGTAGCCAATGTCGTTAA----------------------------------
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--------------------TGTGGTACTGCATGACTTGTCTCTGTCTGTTGTCACCT-CGTTACCTGTTTCAGATGTTG
CTCAGAATCGATTTTTTGCCTACTAAAAGCAGAAGTGTCACATACATACCATAAAGCCTACCCAAAGGCATGCTACGGAT
ATTACCATGCATATATTTTCGGCTAATCGCCAGTTGTTAATGCACTTTACATGGCGGGGAGCAGTGCTTTAACAGTTCAG
TTTCTTCTCACAGGATTCGTTGTGGACGATATGATACATGCTCGCACTTTGAGCGCTTTTGCTCTTTAGTTTTTTGCTTT
CTCTTTTGCATGAACCTGTCGCGAAGCAAGGTATTGCTCCCAGACCCAGGCTCCCGGCTACACAACCTTCCATCATGCGC
GCGCATATATATGGCCATTGTGGACCGGTCCTAAACAACAACGAGATCTGCCACACAGCACCCGTCCATCGATCAACGAT
CAACTGAGCAGCAGAGCAGAGGGAGTGACCAGCGACGATGCCGGGAGCCGTGAAGGTGTTCGGGTCGCCGACGTCGTCGG
AGGTCGCCCGCGTCCTGGCGTGCCTCTTCGAGAAGGATGTCGAGTTCCAGCTCATCCGCGTCGACTCCTTCCGCGGCCCC
AACCGCATGCCCCAGTACCTCAAGCTGCAGCCGCACGGCGAGGCGCTCACCTTCGAGGACGGCAGCGTCACCCTCGTCGG
TAAGCAACACAACAAACAATGTCCGTAGATTTTCATCTGTATGATTCACACTTAGTATATGTTGATGATATGTGCGGATG
ATGCGCGTGGGTGCAGAGTCGAGGAAGATCCTGAGGCACATCGCCGACAAGTACAAGAGGCAGGGGAACCTGGACCTCAT
CGGGACGGGGGCGCTGGAGCGCTCGTCAATCGAGCAGTGGCTGCAGACGGAGGCGCAGAGCTTCGACGTGCCCAGCGCCG
ACATGATCTACAGCCTCGCCTACCTGCCGCGCACCATGCCGCTCGACGGGAGGAATGACGG------CGGCGCCGGCAGG
C---------------------AGCAGAAGCAGCAGCGGGACATGATGATGAGCCCGTCCCACATGCAGAAGGTGGAGGA
GATGAAGCAGCTGTTCGAGAAGAGCAGCAGGGATCTGAGCAAGGTGCTGGACATCTACGACCAGCGGCTTGAGGAGGCCG
AGTACCTCGCCGGCGACAAGTTCACCCTTGCTGACCTCTCCCACATGCCCAACGCCGACCGCCTCGCCTCCGACGAGCGC
TCTGCCCGCCTCATCCAGTCCCGCAGGAACGTCAGTCGCTGGTGGGCCGACGTCTCGAGCCGCGAGTCCTGGGTGTACGT
CAAGAGCCTGCAGCGCCCGCCGTCCGCCGAGGCGCCATTCTGATCTCCATGCACGATCGCCGTACGCCTCCTCGCGGCGC
ACGGCCGCCGCTCCGCGAGAAGGTGTCGCCCACTGCCCCACCACATACACTATTTACCGTGGCATTTCCGATACTGCGCT
TCACAGTTTCGATTGATTTCTTTGCCCTGTAATGCGTTTTCGTTG-TTCTGAATAATCTCGTATACG-TTGTGTTCTTCA
TTGGCATGGGTGTTTCGCCCTTGCCTTCC---TGTTGTTGCGGTCCAAAGATCATTTGAATCGTGTAATAATAAGTGTAA
TAAAATGCTTTCCCCTG--CTTTTGGTTCCGATACTGCACTGACAAGCACGAACACGAATTTTCCGATCTGAACTAGTAT
GAACGC-TATCGTCAGCTCTGGTGCAATTTCCTTGGAGAATGTTAATATTTTGGTCATCCATTGTAGCCCTATTGTAGAA
CCTAAAACATGACAAACCTTTTTTTTTACTTCATGTATACAACTTAGGTAAAGCTGGTGATCAACCGACCGATCTTTCCT
CTAACATCCGCGGGGTCTTACATCTGCCACACGTCTTCATGGGCCCGTGCCACCGCATCTCCATTCATCCTTATCTCCAC
TGAAATGCTAGCCACATATATTCTTGCAACTGAGCGCCAGTTTCAAAAGATAGACCACAACAAG-CAGTTTGTTGCAGAC
CCACCAGGAAGGAACCGCGTG----AGGGAGGACAATGACGATGACACAACCTCCGCCGGCGGTGGCCTCCCCGGCCATG
GCGGGGCGACCAGGGCGGCCGGGCCCGAGCAGTCGTCGTCGGAGCCACCCAG---------------------GTGCCGA
CGGGAAGAGCCATGCCGCCTCCGCTGCGGCGCGATCGCGACAGGAGGTCCCCGTCCCCGGCGGCGAAGCGGGTGCAGAAC
CAAT--------GCTACAACACCGTCGGGTCAGCCTCGCGCAGTGGAAGCCGCCCATGCCCGCTAGGCCGTGCGAATGCA
CGCCGACAAGTTTCTGCAACAACGACGGAGTTGCAAAACGGCGAC
>chr1A_1
CCCAGAAACACGAACATATTTGTGGG--AAAACACACACATAGAATCTTATATACACGCACATCATATTTCTATGAGCAT
CTTCGAGATATCAAACAGGTACAATATCTCAATATTAATGAAGTCAACAGAGGCGCCTTCATAGCCGACGAAAACATCTC
CTCCCGCTGAAGAAACATCATCGAAAAGTCTGAAAAAAAAATCAGAAAAATGTGAACCCTAGTATCAAGTCTAAAACTTA
AATCCTGAT---GGGATCGTTCCACCAAAAAAGAAAACCTTAACCTCAGTTCACATGGTCAGGCCTTTGGTCGGACTGCA
GATCCACGGAAAGAGTAAAGAGCTACCAAACATCAGTCACTAGTCAGTACAGTACACCGATGATGCTTTACCTTGATGGA
CGCCACTGCATCTGATACTAAAAATCTGTCAGCGTGCATGCAGATTCAGTACCTAGGCTACTCACTCAACGAATATATTC
ACAACTTCCAACAATAGGATTAGTATAACGTAGCCAATG-----------------------------------------
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------------------------------CATGACTTGTCTCTGTTTGTTGTCACCTTCGTTGCCTGTTTTAGATCTTG
CTCGGGGTCGATTTTCTGCCTACTAAAAGCAGAGGTGTCACATACATAGCATAAAGCCTACCCAAAGGCATGCCATGGAT
ATTACCATGCATATATTTTCGGCTAATCGCCAGTTGTTAATGCACTTTACATAGCGGGGAGCAGTGCTATAACAGTTCAG
TCTCTTCTCCCAGGATTCGTTGTGGACGATATGATACATGATCGCACTTTGGGCGCTTTTGCTCTTTAG-TTTTTGCTTT
CTCTTTTGCAAGAACCTCTCGCCAAGCAAGGTATTGCTCCCAGACCCGGGCTCCCGGCTACACAACCTTCCATCATGCGC
GCGCATATATATGGCCATTGTGGACCGGTCCTAAACAACAACGAGATCTGCCACACAGCACCCACCCATCGATCAACGAT
CAACTGAGGAGTAG-----AGGGAGTGACCAGCGACGATGCCGGGAGCCGTGAAGGTGTTCGGGTCGCCGACGTCGTCGG
AGGTCGCCCGCGTCCTGGCCTGCCTCTTCGAGAAGGATGTCGAGTTCCAGCTCATCCGCGTCGACTCCTTCCGCGGCCCC
AACCGCATGCCCCAGTACCTCAAGCTGCAGCCGCACGGCGAGGCGCTCACCTTCGAGGACGGCAACGTCACCCTCGTCGG
TAAGCAACGCAACAAACAATGTCCGTAGATTTTCATCTGCATGATGCACGC-TAGTATACGTTGATGAAATGTGTGGATG
ATGCGCGTGGGTGCAGAGTCGAGGAAGATCCTGAGGCACATCGCCGACAAGTACAAGAGGCAGGGGAACCTGGACCTGAT
CGGGACGGGGGCGCTGGAGCGCTCCTCCATCGAGCAGTGGCTGCAGACGGAGGCGCAGAGTTTCGACGTGCCCAGCGCCG
ACATGATCTACAGCCTCGCCTACCTGCCACGCACCATGCCGCTCGACAGGAGGAATGACGCCGGCGCCGGCGCCGGCAGG
C---------------------AGCAGAAGCAGCAGCGGGACATGATGATGAGCCCGTCCCACATGCAGAAGGTGGAGGA
GATGAAGCAGCTGTTCGAGAAGAGCAGCAGGGATCTGAGCAAGGTGCTGGACATCTACGACCAGCGGCTTGAGGAGGCGG
AGTACCTCGCCGGCGACAAGTTCACCCTCGCCGACCTCTCCCACATGCCCAACGCCGACCGCCTCGCCTCCGACGAGCGC
TCCGCCCGCCTCATCCAGTCCCGCAGGAACGTGAGCCGCTGGTGGGCCGACGTCTCGAGCCGCGAGTCCTGGGTGTACGT
CAAGAGCCTGCAGCGCCCGCCGTCCGCCGAGGCGCCATTCTGATCTCCATGCACGGTCGCCGTCGT-CTCCTCGCGGCGC
ACGGCCGCCGCTCCGCGAGAAGGTGTCGCCCACTGCCCCACCAGATACACTATTATCCGTGGCATTTCCGTTCCCGCGCT
TCACAGTTTGGATTGGTTTCTTTGCCCTGTAATGTGTTTTCGTTGTTTCTGAATAATCTCGTATGCG-TTGTGTTCTTCA
TCGGCATGGGTGTTTCGCCCTTGCCTTCC---TGTTG---CGGTCGAAAGATCATTTGAATCGTGTAATAATAAGCGCAA
TAAAATGA-TTTCCCTTGTCTTTTGGTTCGGATACTGCACTAGCAAGCACGAGCATGAATTTTCCGATCTACAC-AGTCT
GAACCCATATCGCCAGCTCTGGTGCAATTTTATTGGAGAATATTAATATTTCGG--------------------------
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>chr1B_1
CCCAGAAACACAAACATATTTGCTTGAAAAAACACACATATAGAATCTTATACACATGCACACACTACTTCTATGAACGC
CTCCGAAATACCGAGCAGGTATAATATCTTAAAATTGATGAAGTTATCACAGACGCCTTC-TAGTCGAACGAAACGTCTC
CTCCC-CTGGAAAAACATCACCGAAAAGTCTGAAA-TTTTTTCAGAAAAATGTGATA-CTAGTATCAAGTCTAAAACTTA
AATCGTGACGACGGGATGGTTCCACCAAAAAAGAAAAACTTAACCCCAGTTCACATGGTGAGGCCTTTCGTCGGACCACA
GATCCACGGAAAGAGTAAAGAGCTATCAAACATCAGTCAGTAGTCAGTACAGTACACGG-TGATGCTTTACCTTGATGGA
CGCCACTGCATCTAATACTAAAAATCTGTCCCTGTGCATTCAGATTCAGTACCTATGCTACTCACTCAACGAATATATTC
AGAACTTCCAACAATAGGATTAGTATAACGTAGCCAATGTCGTTAGAGCAACTCCAATAAGGCGATCCATTTCGTTCGTC
GGTATCCGTTTGGGTCGGTGCGGACAAAAAAATCGGCCCAACGTGCCGACCCAAACGGACGCGCGTCTGCTTTTTGTCCA
CAGGCGACCCATTCCCGGCCCATTTTTGAGCCGGGTTTGCGTCGGCGCGGACAAGCGACGGACGCGAGCACGCTCGCCCT
CTCCTCCCTACGGGGCCGCTGGTCTGTGTCACATCGCCCTCCCCCATCCAACAGCAACCCTCGCCCTCCTCCTCCGTCCC
CGACGCCGCCGCCCATTTTTGCCGGCAACTCTGCCAGCTGCCAGGGCCTCCACATCGGCCCAGCTATGCCGCCCACTCCC
ACGCCGCCCACGTCGCCCGCCACCGCCGTCTTGCCGCCGGGAGCCGACTGCTTCCCACCCTCCCTCCCACGCGCCCCCAC
CACACAGCCGCCCCCGACCAAGAAGCCGTCCAGCCAGATCCTCACCGGCACGCTCCTCGAAAGTCGGCATGCTCGGCGGA
CGCCGGCAGGACAGCAGCTGGTCCGTGCGCACCGCGACTCCCTTCGTCGGCCGTCTCCTTCGCCGACGCCCGCAAGCTAT
TCGACAGTTTGCCAAGGTACAAAATGGACTCCGCCGCGAGTTCTTTTTTCACAATTTCTTTTGCGACTCCGACGATTCGT
CCTCCGATGACGAGGAGGAGATATTGGCTGTCGTGTTGGTCCATCACCACCTCAACAGCCAGCGGCCATTGTTCCGTGGC
TCCATTCCGGGCCACCTTCTGGCGTTGAATCGCAACCGAGAGAGCGGGCATTTCCTTCTTTGGAAGGACTACTTTGATAC
AACAAACCCGTTGTTCAAACATCAGAAATTCCGCCACCGTTTCCGTATGAGTAGGCATGTCTTCAACCGTATTAGAGAGG
GGGTGGTCGGCTATGATGACTATTTCGAGTGCAAAGAGGATGTCGTTGGTAAGATTGGTTTTTCCTCTTATCAGAAATGC
ATTGCCGCCATCCGAATGCTTGCATACGGAGTCCCCGGTGATCTCATTGACGAGTATGTCCGTATGAGCGAGTCTACTTG
CCTAGAGTCTCTGTATAAGTTCTGCAAGGCTATTATTCCTGTGTTTGGCCCTGTGTACTTGAGAGAGCCGTCTGCTGAAG
ATACAACTCGTTTGTGGGCGATGAATGGCAGCAGGGGCTTCCCATGGATGCTTGGTAGTATAGACTGCATGCATTGGGAG
TGAAAGAACTGTCCTTCTGCTTGGCAAGGGCAGTATAAGGGCCATGTCAGGGCTTGCACTGTCATACTTGAGGCCGTGGC
GTCTCAAGATCTCTGGATCTGGCACTCTTTTTTTGGCATGGCCCAATCCCACAATGATATCAACGTGCTTCAGCGCTCGC
CGGTGTTTGCTAGGCTTGCCGAAGGCAACAGCCCACCGGTGAACTTTACTGTCAACGGCCACACCTACGACAAAGGATAC
TATCTGGGTGACGGTATTTATCCTCAGTGGACCACTATTGTCAAGACAATACCCAACCCTGTGGGACAGAAGAGGAAAAG
GTTTGCCCAAGAGCAAGAGAGTGCTAGGAAGGATGTCGAGCGTGCCTTTGGTGTTTTGCAATCTCGATGGGGCATCGTTC
GGTATCCTGCTAATACCTGAAGCACGCAGAAACTGTGAGAGGTGATGACTACTTGTGTGATCATGCATAATATGATCATA
GAAGACGAGCGCCCGGAACGTCTGTATAATCAAGTGTTTCAGTTTCAGGGTGAGAATGTTGTGCCTGAGCATGGAGTGGC
GGCAAAGTTTGAACAGTTCACCCAATTTCATGAAGACATGCGTGATTGGGAAACTCACGTGCAACTGCAAAATGATTTGG
TTGAGCATATGTGGGCTCATGTTGGCAACCAATAGATGTATCTTCTGTTATTCGATTTGCAAAACTATGTGAGAGCTATG
TGAGACATTTTTATTTTCATTTGGCTTGTAATAAACTATGCTATTTTATTCGGTCCAAAACGAATTTTATTTTAAACTAT
GCAATCATGCAAAAAAAAAATAGGGGTGTGGCGGCCACGCCGGCACATATGCGTCGGCGCGTTGGGCGCCCTGCCGACCC
ATATCTAAAACAGGGAGTACACCGGGCGGACGGCCAACCCAACCGGACAAAAAACGGACGAAATCGCCGTCCGTTTGGGT
CGCCCCATTGAAGTTGCTCTTGTGGTATTGCATGACTTGTCTCTGTCTGTTGTCACCT-C------TGTTTCAGATCTTG
CTCGGGGTCGATTTTTTGCCTACTAAAAGCAGTAGTGTCACATACATAGCATAAAGCCTACCCAAAGGCATGCTACGGAT
ATTACCATGCATATATTTTCGGCTAATCGCCAGTTGTTAATACACTTTACATGGCGGGGAGCAGTGCTTTAACAGTTCAG
TTTCTTCTCCCAGGATTCGTTGTGGACGATATGATACATGTTCGCA-----AGGGCTTTTGCTCTTTAG-TTTTTGCTTT
CTCTTTTGCATGAACCTGTCGCGAAGCAAGGTATTGCTCCCAGACCC----TCCCGGCTACACACCTTCTGC-CATGCGC
GCGCATATATATGGCCATTGTGGACCGGTCCTAAACAACAACCAGATCTGCCACACAGCAACCGTCCATCGATCAACGAT
CAACGGAGCAGCAGAGCAGAGGAAGTGACCAGCGACGATGCCGGGAGCCGTGAAGGTGTTCGGGTCGCCGACGTCGTCGG
AGGTCGCCCGCGTCCTGGCGTGCCTCTTCGAGAAGGATGTCGAGTTCCAGCTCATCCGTGTCGACTCCTTCCGCGGCCCC
AACCGCATGCCCCAGTACCTCAAGCTCCAGCCGCACGGCGAGGCGCTCACCTTCGAGGACGGCAACGTCACCCTCGTCGG
TAAGCAACGCAACAAACAATGTCCGTAGATTTTCATCTGCATGATGCACGC-TAGTATACGTTGATGAAATGTGTGGGTG
ACGCGCGTGGGTGTAGAGTCGAGGAAGATCCTGAGGCACATCGCTGACAAGTACAAGAGGCAGGGGAACCTGGACCTGAT
CGGGACGGGGGCGCTGGAGCGCTCCTCCATCGAGCAGTGGCTGCAGACGGAGGCGCAGAGCTTCGACGTGCCCAGCGCCG
ACATGATCTACAGCCTCGCCTACCTGCCGCGCACCATGCCGCTCGACGGCAGAAAGGACGG------CGGCGCCGGCGCC
GGCCGCGAAGCCATGCAGCAGAAGCAGCAGCAGCAGCGGGACATGATGATGAGCCCGTCCCACATGCAGAAGGTGGAGGA
GATGAAGCAGCTGTTCGAGAAGAGCAGCAGGGATCTGAGCAAGGTGCTGGACATCTACGACCAGCGGCTTGAGGAGGCCG
AGTACCTCGCCGGCGACAAGTTCACCCTCGCCGACCTCTCCCACATGCCCAACGCCGACCGCCTCGCCTCCGACGAGCGC
TCCGCCCGCCTCATCCAGTCCCGCAGGAACGTCAGCCGCTGGTGGGCCGACGTCTCGAGCCGCGAGTCCTGGGTGTACGT
CAAGAGCCTGCAGCGCCCGCCGTCCGCCGAGGCGCCATTCTGATCACCATGCACTGTCGCCGTCT---------------
-------CCTCGCGGCGAGAAGGTGCTGCCCACTGCTCCATATCACTA-----TATCCGTGGCATTTCCGATCCTGCGCT
TCACAGTTTCGATTGATTTGTTTAACCTGTAATGCGTTTCCGTTG-TTCTGAATAATCTCGTATACGATTGTGTTCTTCA
TCGGCATGGGTGTTTCGCCCCTGCTTTCCTGATGTTG---CGGTCGAAAGATCATTTTAATCGTGTAATAATAAGCGTAA
TAAAATGCGTTTCCCCTGTATTTTGGTTCGGATACTGCACTAGCAAGCACGAACACGAATTTTCCGATCTGAACTAGTCT
GAACCC-TATCGCCAGCTCTGGTGCAATTTCACTGGAGAATGTTAATATTTTGGTCTTCCATTGTAGCCC----------
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>chr1B_2290
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-CTAAAACATGACAAACTTCTTTTT--ACTTCGTGTATACAACTTGGGAAAAGCTGGTGATCAACCGACTAAACCAGGTG
CCGAT---------GTCTTACGTCTGCCACACATCTTCATGGGCCCGTGCCACCACATCTTCATTCATACTTATCTCCAC
TTAAATGCTAGCCACATATATTCTTGCAACTGAGCACCAGTTTCAAAATCTAGACCACAAATAAACGGTTTGTTGCAGAC
CCACCAGGAAGGAACCGCATG----AGGGAGGACAACGACGACAACACAACCTCCGTCGGCGATGGCCTCCCCAGCGATG
GCGGGGCGACCAGGGCGGTCGGGCCCGAGCAACCATCGTCGGAGCCACCCAT---------------------GTGCCAA
CGGGAAGAGCCATGCCACCTCCACCGCGGCGCGATCCCGACAGGAGGTCTCCGTCCCCGGCGGCGAAGCGGGTGCAGGAC
CAGCGGTGCAGAGCCACAACACCGTCGGGTCGGCCTCGCACAGTGGAGGCCGCCCATGCCCGCTAGGCCGCGCAAATGC-
---------------------------------------------
>chr2D_2332
TTA-----------------------------------------------------------------------------
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---------------------------------------------GGGAAAAGCTGGTGATCAACCGACCAATCTTTC-T
CTAACATCTGTCGGGTCTTACGTCTGACACACGTCTTCATGGGCACGTGCCACCATATCTCCATTCATCCTTATCTCCAC
TGAAATGCTAGCCACATATATTCTTGCAAGTGAGCACTAGTTTCAAAAGGTACACCGCGACAAG-CGGTTTGTTGCAGAC
CCACCAGGAAGGAACCACGTG----AGGAAGGGCAACGATGAAGACACAACCTCTGCCGGCGGTGGCCTCCCCGACCATG
GCGGGGCGACCAAGGCGGCCGGGCCCGAGCGGTCGTCGCCGGAGCCACCCAG---------------------GTGCCGA
CGGGAAGAGCCATGCCGCCTACACCGCGGCGCGATCCCAGCCGGAGGTCT-CGTCACCGGCGGCGAAGCGGGTGCAGGAC
CAGC--------GCCACAACACCGTCGGGTCGGCCTCGCGCGGTGGTAGCCGCCCATGCCTGCCAGGCCGTGCGGATGCA
TGCCGACAAGTTTTTGCAACAACGACTGAGTTGCAAAACGCCGAC
>chr1D_2338
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-------------------------------------------------AAAGCTAGTGATCAACCGACCGATCTTTCCG
CTAACATCCGCCGCGTCTTACGTCTGCCACACATCTTCATGGGCTCGTGCCACC--------------GCTTATCCCCAC
TGAAATGCTAGCCACATATATTCTTGCAACTGAGCACCAGTTTGAAAAGACAGACCGCAACAAG-CAATTTGTTGTAGAC
CCACCAGGAAGGAACCACGTG----AGGGAGGGCAACGACAACGACACAACCTTCGCCAGCTGTGGCCTCCCCGACCATG
GCGGGGCGACCAGGGAGGTCGGACCCGAGCGGTCGTCGCCGGAGCCACCCAG---------------------GTGCCGA
CGGGAAGAGCCATGCCTCCTTCGCCGCGGCGTGATCCCAGCCGGAGGTCCCCGTAGCCGGCGACGAAGCGGGTGCAGGAC
CAGC--------GCCATAACACCATCGGGTCCGCCTCGCGAAGTGGAAGCCCCCCATGCCCGCCAGGCCGTGTGGATGCA
CGCCGACAAGTTTCTGCAACAACGACGGAGTTGCAAAAAGCGAC-
>chr5B_2338
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-------------------------------------------------AAAGCTGGTGATCAACCGACCAATCTTTC-A
CTAACATCCGCCGGGTCTTACGTCTGCCACACGTCTTCATGGGTCCATGCCACCGCATCTCCATTCATGCTTATCTCCAC
TAAAATGCTAGCCACATATATTCTTGGAACTGAGCACTAGTTTCAAAAGGCAGACCGCAACAAG-CGGTTTGTTGCAGAC
CCACCAGGAAGGAACCGCGTGCGTGAGGAAGGGCAACGACGACAACACAGCCTCCACTGGCGGTGGCCTCCCCGACCATG
GCGGGGCGACTAGGGCGGCCGGGCCCGAGCGGTCGTCGCCGGAGCCACCCAG---------------------GTGCCGA
CGGGAAGAGCCATGCCGCCTACGCCGCGAAGTGATCCCAGTCGAAGCTCC-CTCCGCCGGTGGCGAAGCGGGTGTAGGAC
CAGC--------GCCACAACACTGTCGGGTCGGCCTCGCGCAGTGGAAGCCGTCCATGCCCGCCAGAGCGTGCATAT---
-------AAGTTTCTGCAACAACGACGGAGTTGGAAAACGCCGAC
>chr3A_2338
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-------------------------------------------------AAAGATGGTGATCAACCGACCGATCTTTC-T
CTAACATCCGCCGGGTCTTACGTCTGCCACACGTCTTCATGGGCCCGTGCCACCACATTTTCATTCATTCTTATCTATAC
TAAAATGCTAGCCACGTATATTCTTACAACTGAGCACTAATTTCAAAAGGTAGACCGCAACAAG-CAGTTTGTTGCAGAC
CCACCAGGAACC--------GCGTGAGGAAGGGCAACGCCGATGACAGAGCCTCCACCGGCGGTGGCCTCCCCGACCATG
GCGGGGCGACCAGGGCAGCCAGGCACGAGCAGTCGTCGCCGGAGCCACCCAAGTGCTGGCCGGAGCCACCCAAGTGCCAA
CGTGAAGAGCCATGCCGCCTACGCCTCTGCGTGATCCCAGCCGGAGGTGC-CGTCGCCGATGGCGAAGCGGCTGGAGGAC
CAAC--------GACACAACACCGTCGGGTCAGCCTCCCGCAGTGGAAGTCGCCCATGCCCGCCAAGCCGTGCGGATGCA
CGCCGACAAGTTTCTGCAACAACGATGGAGTTGCAAA--------
>SNPs
----------S---S--------S-----------S--------------------------------------------
S-----------------------------S-S-------------S------S--S-----------------------
--S-SS-S-----------S------------------------------------------------------------
----S-------------------S-------------------------------------------------------
--------------------------------------------------------S-----------------------
---------------------------------------S----------------------------------------
---------------------------------------------S----------------------------------
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---------------------------S-----------------------------------S------------S---
---S-SS-----------------------------------------S-------------------------------
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---------S------------------------------S----------------------------S----------
-----------------------------------------------S--------------------------------
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----------------------------------------------------------------S---------------
--------S------------------------------S-----S---S-S-------S--------S-----S-----
-----------------------------------------------------------------------------S--
------------------------S--S----------------------------------------------------
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----------------------------S--S------------------------------------------------
--S--------------------------------S--------------------------------------------
-------------------------------------------------------S-------SSSS-------------
------------------------------------------------------SS----------------S-------
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-S-----------------------------------SSS-----S-----------------------------S----
--------S--S----S------------S-----------SS-----------------------------------S-
----S-------S------------------S------------------------S-------------SSSSSSSSSS
S----------------S-S-----SS-----S------------S--S-------------------------------
-----------S---------S----------------------------------------------------------
-----------------------------------S--------------------------------------------
------------------------------------S-------------------------------------------
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------------------------S-----------S----------------------------------------S--
---S----------S-----------------------------------------------------------------
----------------------------------------S----
>forward_3088
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----------------------------AGGTATTGCTCCCAGACCCA--------------------------------
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---------------------------------------------
>reverse_4837
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------TGACGATGACACAACCTCCG------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
