>input_sequence_66891
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--------------------------------------------ATGGTGAGACAAGGGCCGTTCGACGGACTGTTCGGC
TTCTCTCAGGTGGTAAACTACTTCAAA----------------TCGATCTTCGTTTCAGACATCAATCATCATATTCATA
CTACACCGATGAACTGATGAGTACTACTGTGATGTGATCATCA--TATTCAGGGCGCCCTCCTGTCGGCCGCGCTTGTTG
GGCTCCAGCAACAAGTGAGTTGTTAATCGTCCTCCTCGTCTCCTGCAGTTCATGCTACTTGCTGGATCCACTGCTATCTG
TCAATGCGTAGTTGCGGCTTAATCGACCTGAACATTCTGTTCTTGTGTTCTTCTATGGCAGGGGCTGGCCTTGAACAGGG
TTCCTAGGGTGAAGTACGTTATGATCATATCCGGTGCGAAGATCCAGTCCCCGGCATTGGCCGCCAAGGCGTACGCCAAC
AAGATCAACTGCGCTTCGCTTCATTTCATTGGTAA-----------CTGCCATGTTATTATCATCTTAGCAATTGTCAGC
AGAAGTGAA-----CAACTGCAAATCTGCAATATATGGCTGAAGTTGCAGTTATTTGCGGGCAGGCGACGGTGACTTCGT
GAAAGCCCACGGCGAGGAGCTGGCGGACTCGTTCGTGGATCCGCTTGTCATACGCCACCCGGCCGGGCACACGGTCCCCA
GACTCGGTAAGCGCGCCTG-----GCCCGTAGATCTGGAAGAGAGCATTTGGGTTCATGGCCGAACGGGACCGGAACGTT
CAGAAAGA-GCAAGGGAAGGTTATTGACTGAGTTTTGCTGGTTTACATTTTGTTTTC--TGTGTGCTCGACATTTGCAGA
CGAGAAGGGCCTCCAGGCGATGCTCAGCTACCTTGACAAGATCGAAAGGGATCTGGCGAGAGATTAA-------------
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>chr2A_1_TraesCS2A01G318000
ATTTTTCATCGGAAAGAGGTCTACGAAGACTTTTGGGAAAACGTCGACGTTTGCTGGCTTATTTGGCAAAGAAAAATAGA
GTACGTTATAAGAAATTAATCGGTCAGTTGAATATTCGGGAGCAGTAATTTAATCGTTCAAATTTTTTTCTTGTTTTATT
ATTTTTTTAGTAGTCTTATAGTAGTCTTAGATTTTTCATTTTGATGAGCCTCGCTTTGAGGAATTCATGGAATAATCCAT
TTTCATGGAATAATGAATTAAGGAAGAAAGGATATGAGTCTACCGCTTACAAGAAAAGATCTCATGATAGTCAATATGGG
CCCTCAACACCCATCAATGCATGGTGTTCTTCGACTGATCGTTACTCTCGATGGTGAGGATGTTATTGATTGTGAACCCA
TATTAGGCTATTTACACAGAGGAATGGAAAAAATCGCGGAAAACCGAACTATTATACAATACTTACCTTATGTAACAAGG
TGGGATTATTTAGCTACTATGGTTACAGAAGCAATAACAGTAAATGCACCAGAATTCTTGGAGAATATTCAAATACCACA
AAGAGCCAGCTATATTAGGGTAATTATGTTAGAATTAAGCCGGATAGCTTCTCACTTGCTATGGCTTGGACCTTTTATGG
CGGATCTCGGCGCACAGACTCCTTTTTTCTATATTTTT----AGAGAGAGAGAATTAATATATGATCTATTTGAAGCTGC
TACAGGTATGCGAATGATGCACAATTACTTTCGCATCGGAGGAGTAGCCGCCGATCTACCTTATGGATGGATCGAGAAAT
GTTTAGATTTCTGTGATTATTTTTTACGCGGAGTTGTTGAATATCAACAACTTATTACACAGAATCCAATTTTTTTAGAG
CGAGTTGAAGGAGTAGGTTTTATTAGCGGAGAAGAAGCAGTAAATTGGGGCTTATCGGGACCGATGTTACGAGCTTCTGG
AATACAATGGGATCTTCGTAAAGTTGGCCGGCATCGAGGAGCTGATGGTGAGACAAGGGCCGTTCGACGGACTGTTCGGC
TTCTCTCAGGTGGTAAACTACTTCAAA----------------TCGATCTTCGTTTCAGACATCAATCATCATATTCATA
CTACACCGATGAACTGATGAGTACTACTGTGATGTGATCATCA--TATTCAGGGCGCCCTCCTGTCGGCCGCGCTTGTTG
GGCTCCAGCAACAAGTGAGTTGTTAATCGTCCTCCTCGTCTCCTGCAGTTCATGCTACTTGCTGGATCCACTGCTATCTG
TCAATGCGTAGTTGCGGCTTAATCGACCTGAACATTCTGTTCTTGTGTTCTTCTATGGCAGGGGCTGGCCTTGAACAGGG
TTCCTAGGGTGAAGTACGTTATGATCATATCCGGTGCGAAGATCCAGTCCCCGGCATTGGCCGCCAAGGCGTACGCCAAC
AAGATCAACTGCGCTTCGCTTCATTTCATTGGTAA-----------CTGCCATGTTATTATCATCTTAGCAATTGTCAGC
AGAAGTGAA-----CAACTGCAAATCTGCAATATATGGCTGAAGTTGCAGTTATTTGCGGGCAGGCGACGGTGACTTCGT
GAAAGCCCACGGCGAGGAGCTGGCGGACTCGTTCGTGGATCCGCTTGTCATACGCCACCCGGCCGGGCACACGGTCCCCA
GACTCGGTAAGCGCGCCTG-----GCCCGTAGATCTGGAAGAGAGCATTTGGGTTCATGGCCGAACGGGACCGGAACGTT
CAGAAAGA-GCAAGGGAAGGTTATTGACTGAGTTTTGCTGGTTTACATTTTGTTTTC--TGTGTGCTCGACATTTGCAGA
CGAGAAGGGCCTCCAGGCGATGCTCAGCTACCTTGACAAGATCGAAAGGGATCTGGCGAGAGATTAATCAATTGTGCTGA
CCGCCACTCTGTTTCATGAGTTTATGGCATAGCAGACTAGTAGTAGTAACATCTACTCCCTCTGTTCCTAAATATTACTA
GCCTTTTAGAGATTTTTATATGAACTACATATAGATGTATGTAGACGTATTTTAGATGTAAATTCATCCATTTCGCTCCA
ATGTAGTCCATATTAGAATCGCTAAAAAGACCTATATTTAGGAGCGGAGGAAGTAACATGGATGACTGACATTTGAAGAC
CACGATAACCGTTTAACACAAGGCTGCG-------GAAATG---TATTAGGTTGTTACCATTTCCATTCCTATGAATAAG
AAGCGGTCGCA-----TTTTGAGATTTAACTAAATAGTGGAGATCGTGAAAGCCA-TTTCATTTGGCAGGGGACAGTTCT
GAAGATCAAGAAGGTGTTGGGATAGGCGTATGCAAGGG---GGCTAGGAGGATCTGCTTGAGCTCTATTCTTTTACGTGC
TCTGGGTGTGTGAGCTCAAATATGAACTTCCGGTT-TTTGCTTAGGCCTAGCAGAGCTGTGTTTCAAGCTTCCTGCGTGT
AGTTGTTGTCTGTCTGCCTCATATGTTCCCAGGCTTTCT---------------------TTTTCTTTTTGCCATTTCCA
CTCTTTAGTTTCATGTAATAGATGAAAATCGA------------------------------------------------
-------------------------------------------------------------------------TGAGGAG
GCTCATTGTCTCAAAAGAAATTTGGCGCAAGACAATGTTCTTATCTATAATTGTGTAACTCAAAACGTCGATATTTGTTT
AACTCAAAACCGGATAATACAATGCTCTAGTCTTGAGATGTGCGTGTGTATAGTGGCGTGCATGTGTGCGTGTGCTTGGT
GATTCTAAAAAGTTATGAACAATATGAATTACCTCCTTAGATTGAATCACTATTCAAACAATCAAGCAGTTTTTTTAAAA
TTTTATAACATTTTCTTGAGCATTCTTTTGGGGCATTAAATCAATCCCCGCCGCCATTGACTACCCAATTTTGACCGTCC
ATCACCATCAGCATCGAGCTTCATCGTGC
>chr7B_1
ATTTTTCATCGGAAAGAGGTCTACGAAGACTTTTGGGAAAACGTCGACGTTTGCTGGCTTATTTGGCAAAGAAAAATAGA
GTACGTTATAAGAAATTAATCGGTCAGTTGAATATTCGGGAGCAGTAATTTAATCGTTCAAATTTTTTTCTTGTTTTATT
ATTTTTTTAGTAGTCTTATAGTAGTCTTAGATTTTTCATTTTGATGAGCCTCGCTTTGAGGAATTCATGGAATAATCCAT
TTTCATGGAATAATGAATTAAGGAAGAAAGGATATGAGTCTACCGCTTACAAGAAAAGATCTCATGATAGTCAATATGGG
CCCTCAACACCCATCAATGCATGGTGTTCTTCGACTGATCGTTACTCTCGATGGTGAGGATGTTATTGATTGTGAACCCA
TATTAGGCTATTTACACAGAGGAATGGAGAAAATCGCGGAAAACCGAACTATTATACAATACTTACCTTATGTAACAAGG
TGGGATTATTTAGCTACTATGTTTACAGAAGCAATAACAGTAAATGCACCAGAATTCTTGGAGAATATTCAAATACCACA
AAGAGCCAGCTATATTAGGGTAATTATGTTAGAATTAAGCCGGATAGCTTCTCACTTGCTATGGCTTGGACCTTTTATGG
CGGATCTCGGCGCACAGACTCCTTTTTTCTATATTTTT----AGAGAGAGAGAATTAATATATGATCTATTTGAAGCTGC
TACAGGTATGCGAATGATGCACAATTACTTTCGCATCGGAGGAGTAGCCGCCGATCTACCTTATGGATGGATCGAGAAAT
GTTTAGATTTCTGTGATTATTTTTTACGCGGAGTTGTTGAATATCAACAACTTATTACACAGAATCCAATTTTTTTAGAG
CGAGTTGAAGGAGTAGGTTTTATTAGCGGAGAAGAAGCAGTAAATTGGGGCTTATCGGGACCGATGTTACGAGCTTCTGG
AATACAATGGGATCTTCGTAAAGT--------------------------------------------------------
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>chr4B_1
ATTTTTCATCGGAAAGAGGTCTACGAAGACTTTTGGGAAAACGTCGACGTTTGCTGGCTTATTTGGCAAAGAAAAATAGA
GTACGTTATAAGAAATTAATCGGTCAGTTGAATATTCGGGAGCAGTAATTTAATCGTTCAAATTTTTTTCTTGTTTTATT
ATTTTTTTAGTAGTCTTATAGTAGTCTTAGATTTTTCATTTTGATGAGCCTCGCTTTGAGGAATTCATGGAATAATCCAT
TTTCATGGAATAATGAATTAAGGAAGAAAGGATATGAGTCTACCGCTTACAAGAAAAGATCTCATGATAGTCAATATGGG
CCCTCAACACCCATCAACGCATGGTGTTCTTCGACTGATCGTTACTCTCGATGGTGAGGATGTTATTGATTGTGAACCCA
TATTAGGCTATTTACACAGAGGAATGGAAAAAATCGCGGAAAACCGAACTATTATACAATACTTACCTTATGTAACAAGG
TGGGATTATTTAGCTACTATGTTTACAGAAGCAATAACAGTAAATGCACCAGAATTCTTGGAGAATATTCAAATACCACA
AAGAGCCAGCTATATTAGGGTAATTATGTTAGAATTAAGCCGGATAGCTTCTCACTTGCTATGGCTTGGACCTTTTATGG
CGGATCTCGGCGCACAGACTCCTTTTTTCTATATTTTT----AGAGAGAGAGAATTAATATATGATCTATTTGAAGCTGC
TACAGGTATGCGAATGATGCACAATTACTTTCGCATCGGAGGAGTAGCCGCCGATCTACCTTGTGGATGGATCGAGAAAT
GTTTAGATTTCTGTGATTATTTTTTACGCGGAGTTGTTGAATATCAACAACTTATTACACAGAATCCAATTTTTTTAGAG
CGAGTTGAAGGAGTAGGTTTTATTAGCGGAGAAGAAGCAGTAAATTGGGGCTTATCGGGACCGATGTTACGAGCTTCTGG
AATACAATGGGATCTTCGTAAAGT--------------------------------------------------------
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>chr3B_1
ATTTTTCATCGGAAAGAGGTCTACGAAGACTTTTGGGAAAATGTCGACGTTTGCTGGCTTATTTGGCAAAGAAAAATAGA
GTACGTTATAAGAAATTAATCGGTCAGTTGAATATTCGGGAGCAGTAATTTAATCGTTCAAATTTTTTTCTTGTTTTATT
ATTTTTTTAGTAGTCTTATAGTAGTCTTAGATTTTTCATTTTGATGAGCCTCGCTTTGAGGAATTCATGGAATAATCCAT
TTTCATGGAATAATGAATTAAGGAAGAAAGGATATGAGTCTACCGCTTACAAGAAAAGATCTCATGATAGTCAATATGGG
CCCTCAACACCCATCAATGCATGGTGTTCTTCGACTGATCGTTACTCTCAATGGTGAGGATGTTATTGATTGTGAACCCA
TATTAGGCTATTTACACAGAGGAATGGAAAAAATCGCGGAAAACCGAACTATTATACAATACTTACCTTATGTAACAAGG
TGGGATTATTTAGCTACTATGTTTATAGAACCAATAACAGTAAATGCACCAGAATTCTTGGAGAATATTCAAATACCACA
AAGAGCCAGCTATATTAGGGTAATTATGTTAGAATTAAGCCGGATAGCTTCTCACTTGCTATGGCTTGGACCTTTTATGG
CGGATCTCGGCGCACAGACTCCTTTTTTCTATATTTTT----AGAGAGAGAGAATTAATATATGATCTATTTGAAGCTGC
TACAGGTATGCGAATGATGCACAATTACTTTCGCATCGGAGGAGTAGCCGCCGATCTACCTTATGGATGGATTGAGAAAT
GTTTAGATTTCTGTGATTATTTTTTACGCGGAGTTGTTGAATATCAACAACTTATTACACAGAATCCAATTTTTTTAGAG
CGAGTTGAAGGAGTAGGTTTTATTAGCGGAGAAGAAGCAGTAAATTGGGGCTTATCGGGACCGATGTTACGAGCTTCTGG
AATACAATGGGATCTTCGTAAAGT--------------------------------------------------------
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>chr2D_1
ATTTTTCATCGGAAAGGAGTCTACGAAGACTTTTGGGAAAACGTCGACGTTTGCTGGCTTATTTGGCAAAGAAAAATAGA
GTACGTTATAAGAAATTAATCGGTCAGTTGAATATTCGGGAGCAGTAATTTAATCGTTCAAATTTTTTTCTTGTTTTATT
ATTTTTTTAGTAGTCTTATAGTAGTCTTAGATTTTTCATTTTGATGAGCCTCGCTTTGAGGAATTCATGGAATAATCCAT
TTTCATGGAATAATGAATTAAGGAAGAAAGGATATGAGTCTACCGCTTACAAGAAAAGATCTCATGATAGTCAATATGGG
CCCTCAACACCCATCAATGCATGGTGTTCTTCGACTGATCGTTACTCTCGATGGTGAGGATGTTATTGATTGTGAACCCA
TATTAGGCTATTTACACAGAGGAATGGAAAAAATCGCGGAAAACCGAACTATTATACAATACTTACCTTATGTAACAAGG
TGGGATTATTTAGCTACTATGTTTACAGAAGCAATAACAGTAAATGCACCAGAATTCTTGGAGAATATTCAAATACCACA
AAGAGCCAGCTATATTAGGGTAATTATGTTAGAATTAAGCCGCATAGCTTCTCACTTGCTATGGCTTGGACCTTTTATGG
CGGATCTCGGCGCACAGACTCCTTTTTTCTATATTTTT----AGAGAGAGAGAATTAATATATGATCTTTTTGAAGCTGC
TACAGGTATGCGAATGATGCACAATTACTTTCGCATCGGAGGAGTAGCCGCCGATCTACCTTATGGATGGATCAATAAAT
GTTTAGATTTCTGTGATTATTTTTTACGCGGAGTTGTTGAATATCAACAACTTATTACACAGAATCCAATTTTTTTAGAG
CGAGTTGAAGGAGTAGGTTTTATTAGCGGAGAAGAAGCAGTAAATTGGGGCTTATCAGGACCGATGTTACGAGCTTCTGG
AATACAATGGGATCTTCGTAAAGT--------------------------------------------------------
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>chrUn_1
ATTTTTCATCGGAAAGAGGTCTACGAAGACTTTTGGGAAAACGTCGACGTTTGCTGGCTTATTTGGCAAAGAAAAACAGA
GTACGTTATAAGAAATTAATCGGTCAGTTGAATATTCGGGAGCAGTAATTTAATCGTTCAATTTTTTTTCTTGTTTTATT
ATTTTTTTAGTAGTCTTATAGTAGTCTTAGATTTTTCATTTTGATGAGCCTCGCTTTGAGGAATTCATGGAATAATCCAT
TTTCATGGAATAATGAATTAAGGAAGAAAGGATATGAGTCTACCGCTTACAAGAAAAGATCTCATGATAGTCAATATGGG
CCCTCAACACCCATCAATGCATGGTGTTCTTCGACTGATTGTTACTCTCGATGGTGAGGATGTTATTGATTGTGAACCCA
TATTAGGCTATTTACACAGAGGAATGGAAAAAATCACGGAAAACCGAACTATTATACAATACTTACCTTATGTAACAAGG
TGGGATTATTTAGCTACTATGTTTACAGAAGCAATAACAGTAAATGCACCAGAATTCTTGGAGAATATTCAAATACCACA
AAGAGCCAGCTATATTAGGGTAATTATGTTAGAATTAAGCCGGATAGCTTCTCACTTGCTATGGCTTGGACCTTTTATGG
CGGATCTCGGCGCACAGATTCCTTTTTTCTATATTTTT--AGAGAGAGAGAGAATTAATATATGATCTATTTGAAGCTGC
TACAGGTATGCGAATGATGCACAATTACTTTCGCATCGGAGGAGTAGCCGCCGATCTACCTTATGGATGGATCGAGAAAT
GTTTAGATTTCTGTGATTATTTTTTACGCGGAGTTGTTGAATATCAACAACTTATTACACAGAATCCAATTTTTTTAGAG
CGAGTTGAAGGAGTAGGTTTTATTAGCGGAGAAGAAGCAGTAAATTGGGGCTTATCGAGACCGATGTTACGAGCTTCTGG
AATACAATGGGATCTTCGTAAAGT--------------------------------------------------------
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>chr5D_1
ATTTTTCATCGGAAAGAGGTCTACGAAGACTTTTGGGAAAACGTCGACGTTTGCTGGCTTATTTGGCAAAGAAAAATATA
GTACGTTATAAGAAATTAATCGGTGATTTGAATATTCGGGAGCAGTAATTTAATCGTTCAAATTTTTTTCTTGTTTTATT
ATTTTTTTAGTAGTCTTATAGTAGTCTTAGATTTTTCATTTTGATGAGCCTCGCTTTGAGGAATTCATGGAATAATCCAT
TTTCATGGAATAATGAATTAAGAAAGAAAGGATATGAGTCTACCGCTTACAAGAAAAGATCTCATGATAGTCAATATGGG
CCCTCAACACCCATCAATGCATGGTGTTCTTCGACTGATCGTTACTCTCGATGGTGAGGATGTTATTGATTGTGAACCCA
TATTAGGCTATTTACACAGAGGAATGGAAAAAATCGCGGAAAACCGAACTATTATACAATACTTACCTTATGTAACAAGG
TGGGATTATTTAGCTACTATGTTTACAGAAGCAATAACAGTAAATGCACCAGAATTCTTGGAGAATATTCAAATACCACA
AAGAGCCAGCTATATTAGGGTAATTATGTTAGAATTAAGCCGGATAGCTTCTCACTTGCTATGGCTTGGACCTTTTATGG
CGGATCTCGGCGCACAGACCCCTTTTTTCTATATTTTT----AGAGAGAGATAATTAATATATGATCTATTTGAAGCTGC
TACAGGTATGCGAATGATGCACAATTACTTTCGCATCGGAGGAGTAGCCGCCGATCTACCTTATGGATGGATCGATAAAT
GTTTAGATTTCTGTGATTATTTTTTACGCGGAGTTGTTGAATATCAACAACTTATTACACAGAATCCAATTTTTTTAGAG
CGAGTTGAAGGAGTAGGTTTTATTAGCGGAGAAGAAGCAGTAAATTGGGGCTTATCGGGACCGATGTTACGAGCTTCTGG
ATTACAATGGGATCTTCGTAAAGT--------------------------------------------------------
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>chr3A_1
ATTTTTCATCGGAAAGAGGTCTACGAAGACTTTTGGGAAAATGTCGACGTTTGCTGGCTTATTTGGCAAAGAAAAATAGA
GTACGTTATAAGAAATTAACCGGTCAGATGAATATTCGGGAGCAGTAATTTAATCGTTCAAATTTTTTTCTTGTTTTATT
ATTTTTTTAGTAGTCTTATAGTAGTCTTAGATTTTTCATTTTGATGAGCCTCGCTTTGAGGAATTCATGGAATAATCCAT
TTTCATGGAATAATGAATTAAGGAAGAAAGGATATGAGTCTACCGCTTACAAGAAAAGATCTCATGATAGTCAATATGGG
CCCTCAACACCCATCAATGCATGGTGTTCTTCGACTGATCGTTACTCTCGATGGTGAGGATGTTATTGATTGTGAACCCA
TATTAGGCTATTTAGACAGAGGAATGGAAAACATCGCGGAAAACCGAACTATTATACAATACTTACCTTATGTAACAAGG
TGGGATTATTTAGCTACTATGTTTACAGAAGCAATAACAGTAAATGCACCAGAATTCTTGGAGAATATTCAAATACCACA
AAGAGCCAGCTATATTAGGGTAATTATGTTAGAATTAAGCCGGATAGCTTCTCACTTGCTATGGCTTGGACCTTTTATGG
CGGATCTCGGCGCACAGACTCCTTTTTTCTATATTTTT----AGAGAGAGAGAATTAATATATGATCTATTTGAAGCTGC
TACAGGTATGCGAATGATGCACAATTACTTTCGCATCGGAGGAGTAGCCGCCGATCTACCTTATGGATGGATCGATAAAT
GTTTAGATTTCTGTGATTATTTTTTACGCGGAGTTGTTGAATATCAACAACTTATTACACAGAATCCAATTTTTTTAGAT
CGAGTTGAAGGAGTAGGTTTTATTAGCGGAGAAGAAGCATTAAATTGGGGCTTATCGGGACCAATGTTACGAGCTTCTGG
AATACAATGGGATCTTCGTAAAGT--------------------------------------------------------
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>chr6B_1
ATTTTTCATCGGAAAGAGGTCTACGAAGACTTTTGGGAAAACGTCGACGTTTGCTGGCTTATTTGGCAAAGAAAAAGAGA
GTACGTTATAAGAAATTAATCGGTCAGTTGAATATTCGGGAGCAGTAATTTAATCGTTCAAATTTTTTTCTTGTTTTATT
ATTTTTTTAGTAGTCTTATAGTAGTCTTAGATTTTTCATTTTGATGAGCCTCGCTTTGAGGAATTCATGGAATAATCCAT
TTTCATGGAATAATGAATTAAGGAAGAAAGGATATGAGTCTACCGCTTACAAGAAAAGATCTCATGATAGTCAATATGGG
CCCTCAACACCCATCAATGCATGGTGTTCTTCGACTGATCGTTACTCTCGATGGTGAGGATGTTATTGATTGTGAACCCA
TATTAGGCTATTTACACACAGGAATGGAAAAAATCGCGGAAAACCGAACTATTATACAATACTTACCTTATGTAACAAGG
TGGGATTATTTAGCTACTATGTTTACAGAAGCAATAATAGTAAATGCACCAGAATTCTTGGAGAATATTCAAATACCACA
AAGAGCCAGCTATATTAGGGTAATTATGTTAGAATTAAGCCGGATAGCTTCTCACTTGCTATGGCTTGGACCTTTTATGG
CGGATCTCGGCGCACAGACTCCTTTTTTATATATTTTTAGAGAGAGAGAGAGAATTAATATATGATCTATTTGAAGCTGC
TACAGGTATGCGAATGATGCACAATTACTTTCGCATCGGAGGAGTAGCCGCCGATCTACCTTATGGATGGATCGAGAAAT
GTTTAGATTTCTGTGATTATTTTTTACGCGGAGTTGTTGAATATCAACAACTTATTACACAGAATCCAATTTTTT-AGAG
AGAGTTGAAGGAGTAGGTTTTATTAGCGGAGAAGAAGCAGTAAATTGGGGCTTATCGGGACCGATGTTACGAGCTTCTGG
AATACAATGGAATCTTCGTAAAGT--------------------------------------------------------
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>chr1D_2
-TTTTTCATCGGAAAGAGGTATACGAAGACTTTTGGGAAAACGTCGACGTTTGCTGGCTTATTTGGCAAAGAAAAATAGA
GTACGTTATAAGAAATTAATCGGTCAGTTGAATATTCGGGAGCAGTAATTTAATCGTTCAAATTTTTTTCTTGTTTTATT
ATTTTTTTAGTAGTCTTATAGTAGTCTTAGATTTTTCATTTTGATGAGCCTCGCTTTGAGGAATTCATGGAATAATCCAT
TTTCATGGAATAATGAATTAAGGAAGAAAGGATATGAGTCTACCGCTTACAAGAAAAGATCTCATGATAGTCAATATGGG
CCCTCAACACCCATCAATGCATGGTGTTCTTCGACTGATCGTTACTCTCGATGGTGAGGATGTTATTGATTGTGAACCCA
TATTAGGCTATTTACACACAGGAATGGAAAAAATCACGGAAAACCGAACTATTATACAATACTTACCTTATGTAACAAGG
TGGGATTATTTAGCTACTATGTTTACAGAAGCAATAACAGTAAATGCACCAGAATTCTTGGAGAATATTCAAATACCACA
AAGAGCCAGCTATATTAGGGTAATTATGTTAGAATTAAGCCGGATAGCTTCTCACTTGCTATGGCTTGGACCTTTTATGG
CGGATCTCGGCGCACAGACTCCTTTTTTCTATATTTTT----AGAGAGAGAGAATTAATATATGATCTATTTGAAGCTGC
TACAGGTATGCGAATGATGCACAATTACTTTCGCATCGGAGGAGTAGCTGCCGATCTACCTTATGGATGGATCAATAAAT
GTTTAGATTTCTGTGATTATTTTTTACGCGGAGTTGTTGAATATCAACAACTTATTACACAGAATCCAATTTTTTTAGAG
CGAGTTGAAGGAGTAGGTTTTATTAGCGGAGAAGAAGCAGTAAATTGGGGCTTATCAGGACCGATGTTACGAGCTTCTGG
AATACAATGGGATCTTCGTAAAGT--------------------------------------------------------
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>chr2D_980
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-----------------------TTGGCCGGCATCGAGGAGCTGATGGTGAGACAAGGGCCGTTCGACGGACTGTTTGGT
TTCTCTCAGGTGGTAAACTACTTCAACTTGGGTTCCATTAGCTTCGAGCTTCGTTTCAGACATCAATCGTCATACTCATA
CTACTCCGATGAACTGATGAGTAGTACTAT--TGTGATCATCA--TATTCAGGGCGCCCTCCTGTCGGCCGCGCTTGTTG
GTCTCCAGCAATAAGTGAGTTGTTAATCGTCCTCGTCGTCTCCTGCAGTTCATGCTACTTCTTTGGATCGAC--------
------------TGCGGCTAAATCGACCTGAGCATTTTGTTCTTGTG---TTCTATGGCAGGGGTTGGCCTTGAACATGG
TTCCTAGGGTGAAGTACGTTATGATCATATCCGGTGCGAAGATCCAATCCCCGGCATTGGCTGCCAAGGCGTACGCCAAC
AAGATCAACTGCACTTCGCTTCACTTCATTGGTAA-----------CTGCCATC---TTATCGTCTTAGCAATTGTCAGC
AGAAGTGTAGTGAGCAACTGCA------------ATGGCTGAAGCTGCAGTTCCTTGCGCGCAGGTGACGGTGACTTCGT
GAAGGCCCACGGCGAGGAGCTGGCGGACTCGTTCGTGGATCCACTTGTCATACGCCACCCGGCCGGACACACGGTCCCCA
GATTCGGTAAGCACGCCACGCCTAGCCTGTAAATTTGGAAGACAGCATTTGGGTTCATGGCCGAACG-----------TT
CAGAAAGGTGCAAGACAAGGTTATTGACTGAGTTTTGCTAGTTTACATTTTGTTTTGTTTTTGTGATCGACATTTGCAGA
CGAGAAGGGTCTCCAAGCGATGCTCGGCTACCTTGACAAGATTGAAAGGGATCTGGCGAGAGATTAATCAATTGTGCTGA
CCACCACTCTGTTTCATGAGTTTATGGCACAATAGTGATA----------------------------------------
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-----------------------------------------------------TAACATGGGTGGCTGACATTTGAAGAC
CACGATAACCGTTTGACACAAGACTGCAGAGAAGAGAAAAG---TATTAGGCTGTTACTATCTCTATTCCAGTGAATAAG
AAGCGCTCGCATTTATTTTAGAGATTTAACGAAATAGTGGAGACCGTGAACCAGCCATT---------------------
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>chr2B_992
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-----------------------------------GAGGAGCTGATGGTGAGACGAGGGCCGTTCGACGGACTGTTCGGT
TTCTCTCAGGTGGTAAACTACTTCAACTTGGGTTCCATTAGCTTCGAGCTTCGTTGGAGACATCAATCATCATATTCATA
CCACTCCGATGAACTGATGAGTACTACTGTGATCATCATATTCATTATTCAGGGCGCCCTCCTGTCGGCCGCGCTTGTTG
GGCTCCAGCAACAAGTGAGTTGTTAATCGTCC-CGTCGTCTCCTGCCGTTCATGCTACTTCTTTGGATCGAC--------
------------TGCAGCTCAATCGACCTGAACATTTTGTTCTTGTG---TTCTATGGTAGGGGCTGGCCTTGAACATGG
TTCCTAGGGTGAAGTTCGTTATGACCATATCCGGTGCGAAGATCCAGTCGCCGGCATTGGCTGCCAAGGCGTACGCCAAC
AAGATCAACTGCACTTCGCTTCACTTCATTGGTAATAACCTCGATGCTGCCATG---TTATCATCTTAGTAATTGTCAGC
AGAAGG-----GAGCAACTGCA------------ATGGCTCAAGTTGCAGTTCCTTGCGCGCAGGTGACGGTGACTTCGT
GAAAGCCCACGGCGAGGAGCTGGCGGACTCGTTCGTGGATCCACTTGTCATACGCCACCCGGCCGGGCACACGGTCCCCA
GACTCGGTAAGCGCGCCTAGCC-----TGTAAATTTGGAACAGAGCATTTGGGTTCATGGCCGAACGGGGTCGGAACGCT
CACAAAGA-GCAAGACAAGGTTATTGACTGAGTTTTGCTGGTTTACATTTTGTTTTTTTTGTGTGCTCGCT-TTTGCAGA
CGAGAAGGGCCTCCAGGCGATGCTCAGCTTCCTTGACAAGATCGAAAGTGGTCTGGCGAGAGATTGATCAACTGTGCTAA
CCACCACTCTGTTTCATGAGTTTATGGCATAG-----TAGTAGTACTAACATCTAC------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------TAACATGGATGACTGGCATTTGAAGAC
CACGATAACCGTTTAACACAAGGCTGCG-------GAAAAGTATTATTAGGTTGTCACTATTTTCATTCCTATGAATAAG
AAGCGGTCGCA-----TTTCGAGATTTAATGAAATAGTGGAGATCGTGAAGCCATTTTTCATTTGGCAGGAGGCAGTTCT
GAAGATCAAAAAGGCGCAAGGGGGCATGGCGGGAAGCCTATGGCTAGGAGGATCTGCTTGAGCTCTATTCTTTTGCGTGC
TCTGGGTGTGTGAGCTCAAATATGAACTTCCGGTTTTTTGCTTAGGACTGGCAGAACTGTGTTTCAAGCTTCTTGCGTGT
AGTTGCTGTCTGTCTGCCGCATATGTTCCCAGGCTTTCAGTTTTTTTTTTGCGGGGTACGTTTTCTTTTTGCCCTTTCTA
CTCTTTAGTTTCATGTAATAAATGAAAATCGATGAGGGCTTGTTCGGTTGACATGGAAAATGAAGGGATTTGGCAGGGAT
TGCACCCTCTACAAGTGAAAATCCCCTCCAATCCACCCCAATCCCCTGTGAGGGGGTGTAACTGAACGAAGCCTGAGGAG
GCTCATTGTTTCAAAAGAAATTTGGCGCGAGACAATGTTCTTATCTATAATTGTGTAACTCAAAACATCGATAATTGTTT
AACTCAAA------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>SNPs
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
--------------------------S--------------------S--------------------------------
----S---------------------------------------------------------------------------
----------------------------------S-------------------------SS-S-SSS-SSSSSSSSSSS
SSSSSSSSSSSS-------S----------------S----------SSS---------------------------S--
-------------------------------------------------------------S------------------
------------S----------S------------------------------SSS-----------------------
-------S--------------SSSSSSSSSSSS------------------SS-----S-----S--------------
------------------------------------------S-------------------------------------
------------------S--------S---S--S----------------------------------SS---------
--------------SS----------------------------------------S-----------------------
--------------------------------------------------------------------------------
--S-----------------------------S--SS--------S----------SSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------
---------------------------------------S------------------S---------------------
-------------------S----------S-------------------SS-SS---------------S-S-------
---------S----S-SSS--SSSSSS-SSS-S---SS------------------------------------S-----
----------------------------------------------S--S-----S----------------S-------
-----S------------S-------------------S----------------------------------S----S-
--------------------S-----------------------------------------------------------
--------------------------------------------------------------------------------
---------S------------------S-------------------------------------S------S------
--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_502
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------AGG
TGGGATTATTTAGCTACTATGG----------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>reverse_2353
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------CAAGGGGGCTAGGAGGATCT----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
