>input_sequence_66774
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---------------------------------------------ATGCCTCTCCTCACTTCTT-----TTGTGCGTTGC
CGCTTTATAATGCAACCCGTCTCCGTGTGTTCAAGCAGAGCGACCAAAGAGCAAAGTGACGAAGAGCACACTGCAACTCA
CCGAGCAGAGTTTGTTACAGGACACATGGCTTTATCTCGCCTGTGCCTCAAGAAGGCCCTCGCCGGCCGCGCGGCAGCTA
TGGCGAGGCCAGCGTCAGCCAGTTCTCACGGAGGAATGTCCC------------TCTTCTCCGCGGCAGCTGACAGCGCC
GCGACCAGGGCTCCCCTGGAAGGAGAGACGAACCGTCGGGAGGTCGCCGTGGCAGACCGCTCCAGCTCTGCCACTGCTCG
CGGCGGCCGTTGGCCTTGGAGAGACCTTCGGGACTTCGTCCCGTTCCGCCTCGTCAACGGTACATAGCGGCTGCTCCG--
--TACTTCTTTCCAGACTGTCGTGCACACCGTCCCGCCGGCGGTTGTTGACGTAGGTGTACATGCAGGGCTGGGGAGCGC
GCTGTCGCACGTCGCGGAGACCCTGAGCCGGCCGCTGGAGCGGTGGCGGCCGCTCTTCGGGAAGGTGCGGGAGGACGAGG
AGAGGTACAGGCTGCGGTTCGAGGTGCCGGGGCTGGGGAAGGACGACGTGCGGGTCACGGTGGAGGACGGCGCGCTGGTC
ATCCGGGGCGAGAAGAGGGTGGAGGATGAGCACGGCGGCGACGGCGAGTGGTGGTCGGCGAGCAGCTACGGGTACTACCA
CGCGAGCCTGCTGCTCCCGGAGGACGCGCGGGTGGACGGGATCGCGGCGGAGGTGAAGGACGGCGTGCTGTACGTGACGG
TGCCGCGCGTGCCCGGGAGGGAGAGGAGCGTCACTGAGGTGAAGGTGCAGTGA---------------------------
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>chr6B_1_TraesCS6B01G210600
GTTGGAGAGCGAAAGGGCGGCGGACGACATCGCGGCGATGCGGAGGAGGATAGCGCGCGGCGGCGGCGGCGGATGGATCG
GGCGGCGCGTATTGTCCACGTGGCGGCCCTGTGGCTAGCTAGCAAGCAGCTGGATGGATCCTGCTTATGTGTATAGCTAG
CTAGCAAGCGGCGGCGGCTATGCGGAAGATGGGATCGGGCGGCGGCGGCCCGATCTGGCTGATACCAAGTTGAAGAGGTA
GGTTTAGGTATTTGCGTGGGTGACTAACATCCAGCCTCATGTCTCTTTACATAAATGATCATAATATAATTACATACGTA
TACAAATACGTGTACATGTACAATATGCTAGACCCTATTTTACACGTCTTAGTGGATTTGTGCCTCTCAAATGCCACACA
CCCCTATATGAAATAAAAAACATATCAGAAAATTTCAAAAAATTCTGAAATTTTGGGTTATCAAACTTGGATGTCCATTG
TACATTCGTGTTCAGTTTCGTGCGGAATGGAGGTGGTGATGATGTTCATGTAAAATCACTATCATGGAGGGGCTCTTCAC
TCCATTTCGTTCTTTATAATATAGTACGCACACTTGTGCGTATTCGAGAAAAAGTTTCGTCGGGAGTAGGTGCCCGTGAT
AATGTCAGTAAAAAGATAAAATTCTTATGTATAGAAAAAAATGTATTGGAAAAAAGTGGATGTATTGGATGCCGAACCGT
AATTCCTGTGCCGCGTATACCACAGGCATCCATTTCCCATGAAAATAAACAAGGGTATACAATGAATATTCATTTTTGAT
ATCCAAAAATCTAGATTTTTTTTAAATTTTCTTATTTTTCTAATGCTATTTTCATATAGGGGTCCGTCCTACCCGGGGGC
TCCAATGCATTTCCCAGCGTTTAGATCACTAAGCTCCATATTCATAGGGCTACTTC--TAGAGCAACTGCTCTAGTTGCT
ACGAGAAGGTTTCGGAAGTATTCGGTTCT--TTCCAGAG-TCCAGATGCCTCTCCTCACTTCTT-----TTGTGCGTTGC
CGCTTTATAATGCAACCCGTCTCCGTGTGTTCAAGCAGAGCGACCAAAGAGCAAAGTGACGAAGAGCACACTGCAACTCA
CCGAGCAGAGTTTGTTACAGGACACATGGCTTTATCTCGCCTGTGCCTCAAGAAGGCCCTCGCCGGCCGCGCGGCAGCTA
TGGCGAGGCCAGCGTCAGCCAGTTCTCACGGAGGAATGTCCC------------TCTTCTCCGCGGCAGCTGACAGCGCC
GCGACCAGGGCTCCCCTGGAAGGAGAGACGAACCGTCGGGAGGTCGCCGTGGCAGACCGCTCCAGCTCTGCCACTGCTCG
CGGCGGCCGTTGGCCTTGGAGAGACCTTCGGGACTTCGTCCCGTTCCGCCTCGTCAACGGTACATAGCGGCTGCTCCG--
--TACTTCTTTCCAGACTGTCGTGCACACCGTCCCGCCGGCGGTTGTTGACGTAGGTGTACATGCAGGGCTGGGGAGCGC
GCTGTCGCACGTCGCGGAGACCCTGAGCCGGCCGCTGGAGCGGTGGCGGCCGCTCTTCGGGAAGGTGCGGGAGGACGAGG
AGAGGTACAGGCTGCGGTTCGAGGTGCCGGGGCTGGGGAAGGACGACGTGCGGGTCACGGTGGAGGACGGCGCGCTGGTC
ATCCGGGGCGAGAAGAGGGTGGAGGATGAGCACGGCGGCGACGGCGAGTGGTGGTCGGCGAGCAGCTACGGGTACTACCA
CGCGAGCCTGCTGCTCCCGGAGGACGCGCGGGTGGACGGGATCGCGGCGGAGGTGAAGGACGGCGTGCTGTACGTGACGG
TGCCGCGCGTGCCCGGGAGGGAGAGGAGCGTCACTGAGGTGAAGGTGCAGTGAGAACGTCCGTCGGTCACCGGCTCACCG
CATAGTGTATCAGCTGCGCGCACTGCTGTGCTGTGCATGCGTGGACACTTGTCTTTGCTTATCTGTGTGGATAGTATACC
TGTGCACGTATGCTCTTTTCATCTTTTTCAATTAAATGATGACCTACTACCTCTGTGCCAGTTTATTAGGTCCCTCTCAT
TTTGGGCTAAAGTTTGACCAACAAATTTAACTAATAAAATGTAAATTATATGTCATAAAAATTATACCTTCGGGAAGCTC
TTTCAAATACATACAAATCCAACAAGATACTTTTGTAGGGTATGCTCCATATTTTCTTAGTCATATCAATGATTAAAATT
TGACTCAAAATACTAGGGGGCCTAATAAATCCAGACGGAGGTAGTAGGCACATCTTCAGTTGATCCATTTTAGCCGATCG
CGTAAAAGATGTCATTCGGACGAGCGTAGACGAGGGTGTTTTTTTATCCGGGATAGATCCCATGAACAATTTTTAGGAAC
CTGTATATTTCGAGCCGTTTCCTCCATATCTACGGATTTCTCTATATCTACGGGATTTAGAGCAATTTTTAGAAGGACCT
AAAACATAAGGAATAGTTGACGGAAGGGAATTGTCAGCTCTTGCCACGGTCTTCATTGAGGGCGACCTCGGAATGCCTCA
ACGCAACCACCTGCCGTCCCGCGAGCTGCCACCGCTCCTCGTTCACAAGCTGCTTTCGCGAGCTAGCTAGCTAGCACTCG
TCGCCGCCGCTGCTGCCTGCTCCTCGTCCTGCGTCCTGCTCCGCGGCAGCGCCGCCACCGGCAAGACGCGCGCTTCTCCT
CGCGCTGCGACACCTCCGCCCCAGCCCCTGCCTCGTCTGCGAAGGACTCAATTGTAATCTTTATTTTATTTGTAGAGGGC
TTTATTCTATTTTGCAGGCATGGGGTAGGGTGTGCGTGTGTGGGTTCATAGAGACGATTGTACATTATGTATGAGTATTT
GCGTGTATTGTGT
>chr6A_690
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-------------------------------------------------AAAAAATTGGATATACTGTATGTCAAACCGT
AATTCCTGTGCCGCGGATACCGCAGGCATCCATTTCCCACGAAAATGAACACATGTGTACAATGAATACTTATTTTTGAT
ATCCAAAATTC-AGATTTTTTTTAAAATTTCTTATTTT--TAATACTATTTTTAAATACGAGTGCGTGC-ACCCGGGTGC
TTCAATGCATTTCCCATCGTTTAGATCACTACGCTCCATATTCATAGGGCGACTTCGCTAGAGCAACTGCTCTAGTTGCT
ACGAGAAGGTTTCGGAAGTGTTCGGT--TCTTTCCAGAGTTCCAGATGCATCTCCTTGCTTCTCTT-----GTGTGTTGC
CGCTTTATAATGCAACCCGTCTCCGTGTGTTCAAGCAGAGCGACCAAAGAGCAAAGTGACGAAGAGCACACTGCAACTCA
CCGAGCAGAGTTTGTTACAGGACACATGGCTTTAGCTCGCCTGTGCCTCAAGAAGGCCCTCGCCGGCCGCGCGGCAGCTA
TGGCGAGGCCAGCATCAGCCAGTTCTCACGGAGGAATGGACCTCCGGTCCCTCTTCTCCTCCGCGGCAGCTGACAGCGCC
GCGACCAGGGCTCCCCTGGAAGGAGAGACGAACCGCCGGGAGGTCGCCGTGGCGGACCGTTCCAGCTCTGCCACTGCTCC
CGGGGGCCGTTGGCCTTGGAGAGACCTTCGGGACTTCGCGCCATTCCGCCTCGTCAACGGTACATAGCGGCTACTCCGTC
CGTACTTCTTTCCAGACTGTCGCGCACGCCGTCCCGCCGGCGGTTGTTGACGTAGGTGTACATGCAGGGCTTGGGAGCGC
GCTGTCGCACGTCGCGGAGACCCTGAGCCGGCCGCTGGAGCGGTGGCGGCCGCTGTTCGGGAAGGTGCGGGAGGACGAGG
AGCGGTACAGGCTGCGGTTCGAGGTGCCGGGGCTGGGGAAGGACGACGTGCGGGTCACCGTGGAGGACGGCGCGCTGGTC
ATCCGGGGCGAGAAGAGGGTGGAGGATGAGCACGGTGGCGACGGCGAATGGTGGTCGACGAGCAGCTACGGGTGCTACCA
CGCGAGCCTGCTGCTCCCGGAGGACGCGCGGGTGGACGGGATCGCGGCGGAGGTGAAGGACGGCGTGCTGTACGTGACGG
TGCCGCGCGTGCCCGGGAGCCAGAGGAGCGTCACTGAGGTGAAGGTGCAGTGAGAACGTCCGTCGGTCA--------TCG
CATAGTGTATCGGCTGCGCGCACTGCTGTGTTGTGCATGCGTGGACACTTGTCTTTGTTTGTCTGTGTGGATTGTGTATG
TGTGCACGTATGCTCTTTTC------------------------------------------------------------
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>chr6D_746
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-------------------------GCATCCATTTACCACGAAAATGAACATGGGTTTACACTGAATACTCATTTTTTAT
ATCCCAAA---------------AAAATTAAATTTTTT--TAATGCTATTTTTATATAGGGTTGTGTGCTGCCCGGGTTC
TCCAATGCATTTCCCAGCGTTTAGATCACCACGCTCCATATTCATAGGGCGACTTCGCTAGAGCAACTGCTCTAGTTGCT
ACGAGAAGGTTTCGGAAGTGTTCGGT--T--TTCCAGAGTTCCAGATGCCTCTCCTTGCTTCTCTTCCCTTGTGCGTTGC
CGCTTTATAATGCAACCCGTCTCCATGTGTTCAAGCAGAGCGACCAAAGAGCAAAGTGACGAAGAGCACGCTGCAACTCA
CCGAGCAGAGTTTGTTACAGGACACATGGCTTTAGCTCGCCTGTGCCTCAAGAAGGCCCTCGCCGGCCGCGCGGCAGCTA
TGGCGAGGCCAGCGTCAGCCAGTTCTCACGGAGGAATGGACCTCCGGTCCCTCTTCTCCTCCGCGGCAGCTGACAGCGCC
GCGACCAGGGCTCCCCTGGAAGGAGAGACGAACGGTCGGGAGGTCGCCGTGGCAGACCGCTCCAGCTCTGCCACTGCTCG
CGGCGGACGTTGGCCTTGGAGAGACCTTCGGGACTTCGTCCCGTTCCGTCTCGTCAACGGTACATAGCGGCTACTCCGTC
CGTACTTCTTTCCAGACTGTCGCG-------TCCCGCCGGCGGTTGTTGACGTACGTGTACATGCAGGGCTGGGGAGCGC
GCTGTCGCACGTCGCGGAGACCCTGAGCCGGCCGCTGGAGCGGTGGCGGCCGCTGTTCGGGAAGGTGCGGGAGGACGAGG
AGCGGTACAGGCTGCGGTTCGAGGTGCCGGGGCTGGGGAAGGACGACGTGCGGGTCACGGTGGAGGACGGCGCGCTGGTC
ATCCGGGGCGAGAAGAAGGTGGAGGATGAGCACGGTGGCGACTGCGAATGGTGGTCGGCGAGCAGCTACGGGTGCTACCA
CGCGAGCCTGCTGCTCCCGGAGGACGCGCGGGTGGATGGGATCGCGGCGGAGGTGAAGGACGGCGTGCTGTACGTGACGG
TGCCGCGCGTGCCCGGGAGGGAGAGGAGCGTCACTGAGGTGAAGGTGCAGTAAGAACGTCCGTCGGTCA--------CCG
CATAGTGTATCGGCTGCGCGCACTGCTGTGCTGTG-------------TTGTCTTTGCTTATCTGCGTGTATTGTGTACG
TGTGCATGTATGCTCATTTC---TTTTTTAATTAAATGATGA--------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S-----S--S--S---S-S------
---------------S-----S-----------------S------S----S----S-----------S-----------
--------S--S--------------S-----------SS------------S----------S---S---------S--
-------------------------------S------------------S-----------------------------
-------------------S------SS----------------------------SS-----S----------------
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----------------------------------S---------------------------------------------
--------------------------------------SS-----------------S----------------------
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------------------------------------------------------------------------S-------
----------------------S----S----------------------------------------------------
------------------------------------------------------S-------------------------
--S-----------------------------------------------------------------------------
-----------------------------------S-----------S-------------------------S------
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---------------------------------------------------------------------SSSSSSSS---
-----------S------------------------------------------------------------S--S---S
--------------------SSS-----S-------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSS
>forward_511
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-----------TCAGTTTCGTGCGGAATGGA-------------------------------------------------
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>reverse_2330
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---------TGTCATTCGGACGAGCGTAG---------------------------------------------------
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