>input_sequence_66766
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--------------------------------------------ATGAAGCTCCTGAGGTTTAAATTTGACCCTGACCCC
ATGAGTTGTTCCTGGAATATAT------ATGGTAG---TGATGATCTCTCGTATGTGGCTCACTACCCATATAAATACGA
TTTTTGTTGCGAGAGTTTGACGGATTTGTCATTGGCACACATTGCAACTAAGCCAGGAATAGGACTTCGTTTTCTCTTGG
GGAAGTGCAAAGCATTGGAGAAACTGCGTCTGGAGTATATCAATGGCCTAAATGACAGTGACATGATTACGCTATCCAAG
TGCTGCAAAAACCTTAGAAGCATCTCACTTTGGCTCCTGCCACAGTTCTATGGTGGCA---------------ATTTCAG
GACGGCATTTACTGATGACAGCCTGAAATCTCTAGCTGTCAGTTGTCCTATGCTTGAGTCTATTGAACTCACGTTTGATG
GTTGTGAGCCCTTATATCCATCAGAAATAGGCTTCACACAGGATGGCCTTATCATGCTCATTCAGTCTTGTCCGATTCGT
GTTCTTGTGCTAAGGGGTGCCAACTTTTTTGCTGACAAGGGGATGAAGGCCCTCTCATCTGCTCCATTACTGGAGACACT
CGAGCTTGTGTGCTGCAGAGCAATAACAGATGCTGGGATGCGTTTCATTGCGCGTGCCCCATGCTTGATCAATCTCACAC
TCCGGATCTGTGCACAGGTGACTGATGCTGGAGTGGCCATGCTAGTACATGCACTGAAGTTAGAGTCTCTGATCATTGAA
GGCTGCGACCGGGTCTCTAAGAAGGCTGTGAAGAGGGTTGGTGAAT---------------------------------C
AGCTCAGTGCCACACTTCCAAAAAAAGATCGGTTCAGTACTCCGCCGAGTCTGCAAGCCCGGCCGAATTAAAAAGAATTC
GCTACTAA------------------------------------------------------------------------
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>chr5B_1_TraesCS5B01G105300
TGATTCTGTAAATGTCAAGAAGCAAACCTAGAAATCTCAGAGCATGCATGATATAGCTAATAGCTTTGGTTCTATTGATG
CGTGCAACATTCCCAGGTCTAAGTAGCACTGACAACTCAGTCCTCATTACATGTTGTGGTTTTCACAGTGCTCAGTTAAA
CACTTCCTATTATGTCTGTTCAACAGATAAGTGTTATCTTGCGGACGCATATTTGCTTTTCTTAATGTATGTGTGTCAAC
ACGGAAAGGTTCACATTTGTTGGTATACATATGCTTCTTGATGTCCTGTGGTACTGTAACCTAATAATCTTCGTATGCTT
CGCTCTAATGTCTCT-AATTTCAGTGCAGTATGATGTATACCTGCTGAACGTTAAGATTACCCATCAACACAGCTGCTTT
CCTCGATGGAGGATCTCCCAGAGC-ACTGCTAGCAGAGATTGTCAAGAAGGTTGCCAAGAGAAGTGATCTGAATTCGTTT
TCCCTTGTGTCAAAGCAGCTCTACTCCATTGAGGCATCACAAAGGGGTGTCATCCGTGTCGGCTCTGGCCTTCACCCTGC
TAGAAAAGCCTTGGCATCACTGTGTTCCCGGTTCCCAAATTTGTGGAAAGTGGAAATTGATTACTCTGGTTGGACCAGTG
GCCATGGGAATCAGTTGAGCAATAAAGGCCTCCTTGTGATCTCATCATGTTGCCCCTCACTAACTGATCTAACCTTAAGC
TTCTGTTCACGCATCAAGGATTCTGGTCTTGGATATCTCGTCAATTGCAAGAAATTGATGTCTCTGAGGCTGAACTCCAT
CTAAAAAATAACTTCAGGTGGGATCCTCTCGGTGGTAGTTGGTTGCAAGACTCTATCTGCTCTCCACCTTATTGACTGTG
--AGAAAATCGGGAGCGAAGGCTGGCTGGAGAACCTTGGTTGTGAGGGATCATTGGAAGAGCTTGTTGTGGAGAACTGCA
AAGGAATCAGCCAGTATGACCTCCTAAAGTTTGGACCGGGATGGATGAAGCTCCTGAGGTTTAAATTTGACCCTGACCCC
ATGAGTTGTTCCTGGAATATAT------ATGGTAG---TGATGATCTCTCGTATGTGGCTCACTACCCATATAAATACGA
TTTTTGTTGCGAGAGTTTGACGGATTTGTCATTGGCACACATTGCAACTAAGCCAGGAATAGGACTTCGTTTTCTCTTGG
GGAAGTGCAAAGCATTGGAGAAACTGCGTCTGGAGTATATCAATGGCCTAAATGACAGTGACATGATTACGCTATCCAAG
TGCTGCAAAAACCTTAGAAGCATCTCACTTTGGCTCCTGCCACAGTTCTATGGTGGCA---------------ATTTCAG
GACGGCATTTACTGATGACAGCCTGAAATCTCTAGCTGTCAGTTGTCCTATGCTTGAGTCTATTGAACTCACGTTTGATG
GTTGTGAGCCCTTATATCCATCAGAAATAGGCTTCACACAGGATGGCCTTATCATGCTCATTCAGTCTTGTCCGATTCGT
GTTCTTGTGCTAAGGGGTGCCAACTTTTTTGCTGACAAGGGGATGAAGGCCCTCTCATCTGCTCCATTACTGGAGACACT
CGAGCTTGTGTGCTGCAGAGCAATAACAGATGCTGGGATGCGTTTCATTGCGCGTGCCCCATGCTTGATCAATCTCACAC
TCCGGATCTGTGCACAGGTGACTGATGCTGGAGTGGCCATGCTAGTACATGCACTGAAGTTAGAGTCTCTGATCATTGAA
GGCTGCGACCGGGTCTCTAAGAAGGCTGTGAAGAGGGTTGGTGAAT---------------------------------C
AGCTCAGTGCCACACTTCCAAAAAAAGATCGGTTCAGTACTCCGCCGAGTCTGCAAGCCCGGCCGAATTAAAAAGAATTC
GCTACTAATGCTGTT-GAGTTTAAAACCATCTGCTGGGTTCATGCTGGACTTCGGACGACTTCAGACGGTGCACCACTAG
TGTGTTACTCTACGTTGCTACTCCCTTTGTCCTAGAATATAAGATGTTATTACAACCTATATACTCACATA---------
------------------------------TACTACTTTGTGTATTTTTATGTGTTTGCACTTGACAAAATTCACTTATT
CTGCCCAAGATTCGGTATTTCAGGTTGTGAACTTGCAGATCGTAGCAGTGCAACTTGATTCTCCATGCGGTGTTCAACAT
AATTATTTGGCTGTTTGCTTTCGCTGTACTTCTGCAACCTGTAAT----------------------------------G
CTCTCTCTCGACCCTTTTTTTTCCTGACGTGCATATGTACGGTACCTAGCAAGCATCGATGATT----------------
-CCCATAGTCTGTTCTGTTTAAGTTAGCAAAGGGTTTGAAGGCCTAGCTGGTTTTAAATAAAAAAGAAGACCTTTTTGTA
GGCTGGGCAAGGGCAATTTGCAAGGATATGTGTGAG-TTTTACTCGCAACTGCAAAAGATTGACTCCAGATACATACATG
CTGCAACAGTGCAATAGACGCAGTGTTCATATGTTTCAAAATGCGGAGG----------------------------AGA
ATCCAAATACGGAAGGCCAGATAAAAGACAATATCATAAGACGGGACTATCGAGGAGGTTTTTTTTCGGTTGAGCATCTA
TTGAGGTTGACTTTTCCTTTGACTTTTGGGTGATCATCTATCGAGGTTTACGTTTTCTTTGAATTTTTTTTGAGACAATT
CATGAAGCCTTTATTAATCCGTCACCACAGTTACAGGGACGAAAGAAAAATTAACGTAGTGGCCTAACCAGACACGGTGG
CCCGCCCCTAACTTTAAAGCATGCTGCGCTAAA-TTATGAGCATCGACATTCGAGCCCCTAAACTCATGAACAAAATTAC
ATAAAGTAAAGCTATGAGAATGTTCTATGATCTCGTGAATAATTGCACCTTAAGCTGTCCCATTAATCTGCTTGATGTCA
TCGATCACA
>chr5A_1
TGATTTTGTAAATGTCAAGAAGCAAACCTAGAAATCTCAGAGCATGCATGATATAGCTAATAGCTTTGGTTCCATTGATG
CGTGCAACATTCCCAGGTCTAAGTAGCACTGACAACTCAGTCCTCATTACATGTTGTGGTTTTCTTAGTGCTCAGTTAAA
CACTTCCTATTATGTCTGTTCAACAGATAAGTGT--TCTTGCGGACACATATTTGCTTTTCTTTATGTATGTGTGTCAAA
AGGGAAAGGTTCACATTTGTTGGTATACATATGCTTCTTGATGTCCTGTGGTACTGTAACCTAATAATCTTCGTATGCTT
CGCTCTAATGTCTCT-AATTTCAGTGCAGTATGATGTATACCTGCTAAACGTTAAGATTACCCATCAGCACAGCTGCTTT
CCTCGATGGAGGATCTCCCAGAGCCACTGCTAGCAGAGATTGTCAAGAAGGTTGCCAAGAGAAGTGATCTGAATTCGTTT
TCCCTTGTGTCAAAGCAGCTCTACTCCATTGAGGCATCACAAAGGGGTGCCATCCGTGTCGGCTCTGGCCTTCACCCTGC
TAGAAAAGCCTTGGCATCACTGTGTTCCCGGTTCCCCAATTTGTGGAAAGTGGAAATTGATTACTCTGGTTGGACCAGTG
GCCATGGGAATCAGTTGGGCAATAAAGGCCTCCTTGTGATCTCGTCATGCTGCCCCTCGCTAACTGATCTAACCTTAAGC
TTCTGTTCACGCATAAAGGATTCTGGTCTTGGATATCTCGTTAATTGCAAGAAATTGATGTCTCTGAGGCTGAACTCCGT
CCAAAAAATAACTTCAGGCGGGATCCTCTCAGTGGTAGTTGGTTGCAAGACTCTATCTGCTCTCCACCTTATTGACTGTG
--AGAAAATCGGGAGCGAGGGCTGGCTGGAGAACCTTGGATGTGAGGGGTCATTGGAAGAGCTTGTTGTGGAGAACTGCA
AAGGAATCAGCCAGTATGACCTCCTAAAGTTTGGACCGGGATGGATGAAGCTCCTGAGGTTTAAATTTGACCCTGACCCC
ATGAGTTGTTCCTGGAATATAT------ATGGTAG---TGATGATCTCTCGTATGTGGCTCACTACCCATATAAATATGA
TTTTTGTTGCGAGAGTTTGACGGATTTGTCATTGGCACACATTGCAACTAAGCCAGGAATAGGACTTCGTTTTCTATTGG
GGAAGTGCAAAGCATTGGAGAAACTGCGTCTGGAGTATATCAATGGCCTAAATGACAGTGACATGATTACACTATCCAAG
TGCTGCAAAAACCTTAGAAGCATCTCACTTTGGCTCCTGCCACAGTTCTATGGTGGCA---------------ATTTCAG
GACGGCATTTACTGATGACAGCCTGAAATCTCTAGCTGTCAGCTGCCCTATGCTTGAGTCTATTGAACTCACATTTGATG
GTTGTGAGCCCTTATATCCATCAGAAATAGGCTTCACACAGGATGGCCTTATCATGCTCATTCAGTCTTGTCCGATTCGT
GTTCTTGTGCTAAGGGGTGCCAACTTTTTTGCAGACAAGGGGATGAAGGCCCTCTCATCTGCTCCATTACTGGAGACACT
CGAGCTTGTGTGCTGCAGAGCGATAACAGATGCTGGGATGCGTTTCATTGCACGTGCCCCATGCTTGATCAATCTCACAC
TCCGGATCTGTGCACAAGTGACTGATGCTGGAGTGGCCATGCTAGTACATGCACTGAAGTTAGAGTCTCTGATCATTGAA
GGCTGTGACCGGGTCTCTAAGAAGGCTGTGAAGAGGGTTGGTGGAT---------------------------------C
AGCTCAGTGCCACACTTCCAAAAAAAGATTGGTTCAGTACTCCGCCGAGTCTGCAAGCCCGGCCGAATTAAAAAGAATTC
GCTACTAATGCTGTTTGAGTTTAAAACCATATGCTGGGTTCATGCTGGACTTCGGACGACTTCAGACGGTGCACCACTAG
TGTTG--CTCTACGGTGCTACTCCCTTTGTCCTATAATATAAGATGTTATTACAGCCAATATACTCACATATTTGTTGTA
GTAACATCTTATATTATGGGACAGAGGGAGTACTACTTTGTGTATTTTTCTGTGTTTGCACTTGACAAAATTCACTTATT
CTGCCCAAGATTCGGTATTTCAGGTTGTGAACTTGCAGATCGTAGCAGTGCAACTTGATTCTGCATGCGGTGTTCAACAT
AATTATTTGGCTGTTTGCTTTCACTGTACTTCTGCAACCTGTAATATTGTGGAAACAGTTTTGAATATGGCTGTAGCATG
CTCTCTCTCGACCATTTTTTTT-CTGACGTGCATATGTACGGTACCTAGCAAGCATCGATGATTCGAATATCTGGCCTGC
GCCCATAGTCTGTTTTGTTTAAGTTAGCAAAGGGTTTGAAGGCCTAGCTGGTTTTAAATGAAAAAGAAGACCCTTTTGTA
GGCTGGGCAATGGCAATTTGCAAGGATATGTGCGAGTTTTTACTCGCAACTACAAAGGATTGACTCCAGATACATGCATG
CTGCAACCGTGCAATAGACGCAGTGTTCATATGT----------------------------------------------
--------------------------------------------------------------------------------
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---------
>chr5D_1
TGATTCTGTAAATGTCAAGAAGCAAACCTAGAAATCTCAGAGCATGCATGATATAGCTAATAGCTTTGGTTCTATTGATG
CGTGCAACATTCCCAGGTCTAAGTAGCACTGACAACTCAGTCCTCATTACATGTTGTGGTTTTCACAGTGCTCAGTTAAA
CACTTCCTATTATGTCTGTTCAACAGATAAGTGTTATCTTGCGGACGCATATTTGCTTTTCTTTATGTATGTATGTCAAC
ACGGAAAGGTTCACATTTGTTGGTATACATATGCTTCTTGATGTACTGTGGTACTGTAACCTAATAATCTTCGTATGCTT
CGCTCTAATGTCTCT-AATTTCAGTGCAGTATGATGTATACCTGCTGAATGTTAAGATTACCCATCAACACAGCTGCTTT
CCTCGATGGAGGATCTCCCAGAGTCACTGCTAGCAGAGATTGTCAAGAAGGTTGCCAAGAGAAGTGATGTGAATTCGTTT
TCCCTTGTGTCAAAGCAGCTCTACTCCATTGAGGCATCACAAAGGGGTGCCATCCATGTCGGCTCTGGCCTTCACCCTGC
TAGAAAAGCCTTGGCATCACTGTGTTCCCGGTTCCCCAATTTGTGGAAAGTGGAAATTGATTACTCTGGTTGGACCAGTG
GCCATGGGAATCAATTGGGCAATAAAGGCCTCCTTGTGATCTCGTCATGCTGCCCCTCGCTAACTGATCTAACCTTAAGC
TTCTGTTCACGCATCAAGGATTCTGGTCTTGGATATCTCGTTAATTGCAAAAAATTGATGTCTCTGAGGCTGAACTCCGT
CCAAAAAATAACTTCAGGTGGGATCCTCTCGGTGGTAGTTGGTTGCAAGACTCTATCTGCTCTCCACCTTATTGACTGTG
--A--AAATCGGGAGCGAAGGCTGGCTGGAGAACCTTGGTTGTGAGGGATCATTGGAAGAGCTTGTTGTGGAGAACTGCA
AAGGAATCAGCCAGTATGACCTCCTAAAGTTTGGACCGGGATGGATGAAGCTCCTGAGGTTTAAATTTGACCCTGACCCC
ATGAGTTGTTCCTGGAATATAT------ATGGTAG---TGATGATCTCTCGTATGTGGCTCACTACCCATATAAATACGA
TTTTTGTTGCGAGAGTTTGACGGATTTGTCATTGGCACACATTGCAACTAAGCCAGGAATAGGACTTCGTTTTCTCTTGG
GGAAGTGCAAAGCATTGGAGAAACTGCGTCTGGAGTATATCAATGGCCTAAATGACAGTGACATGATCACGCTATCCAAG
TGCTGCAAAAACCTTAGAAGCATCTCACTTTGGCTCCTGCCACAGTTCTATGGTGGCA---------------ATTTCAG
GACGGCATTTACTGATGACAGCCTGAAATCTCTAGCTGTCAGCTGTCCTATGCTTGAGTCTATTGAACTCACATTTGATG
GTTGTGAGCCCTTATATCCATCAGAAATAGGCTTCACACAGGATGGCCTTATCATGCTCATTCAGTCTTGTCCGATTCGT
GTTCTTGTGCTAAGGGGTGCCAACTTTTTTGCAGACAAGGGGATGAAGACCCTCTCATCTGCTCCATTACTGGAGACACT
CGAGCTTGTGTGCTGCAGAGCGATAACAGATGCTGGGATGCGTTTCATTGTGCGTGCCCCATGCTTGATCAATCTCACAC
TCCGGATCTGTGCACAAGTGACTGATGCTGGAGTGGCCATGCTAGTACATGCACTGAAGTTAGAGTCTCTGATCATTGAA
GGCTGCGACCGGGTCTCTAAGAAGGCTGTGAAGAGGGTTGGTGGATCAGCTCAGTGCCACACTTCCAAAAAAAGATGATC
AGCTCAGTGCCACACTTCCAAAAAAAGATCGGTTCAGTACTCCGCCGAGTCTGCAAGCCCGGCCGAATTAAAAAGAATTC
GCTACTAATGCTGTT-GAGTTTAAAACCATCTGCTGGGTTCATGCTGGACTTCGGACGACTTCAGACGGTGCACCACTAG
TGTGTTGCTCTACGTTGCTACTCCCTTTGTCCTATAATATAAGATGTTATTACAACC-ATATACTCACATATTTGTTGTA
GTAACATCTTAAATTATGGGACAGAGGGAGTACTACTTTGTGTATTTTTCTGTGTTTGCACTTGACAAAATTCACTTATT
CTGCCCAAGATTCGGTATTTCAGGTTGTGAACTTGCAGATCGTAGCAGTGCAACTTGATTCTCCATGCGGTGTTCAACAT
AATTATTTGGCTGTTTGCTTTCGCTGTACTTCTGCAACCTGTAATATTGCGGAAACAGTTTTGAATATGGCTGTAGCATG
CTCTCTCTCGACCCTTTTTTT-CCTGACGTGCATATGTACGGTACCTAGCAAGCATCGATGATT----------------
-CCCATAGTCTGTTTTGTTTAAGTTAGCAAAGGGGTTGAAGGCCTAGCTGGTTTTAAATGAAAAAGAAGACCTTTTTGTA
GGCTGGGCAAGGGCAATTTGCAAGGATATGTGTGAGTTTT-ACTCGCAACTGCAAAAGATTGACTCCAGATACATGCATG
CTGCAA------AATAGACGCAGTGTTCATATGTTTCAAAATACGGAGGCAAAAGTTTTGCCTCATCTCATTGACTAAGA
ATCCAAATACGGAAAGCCAGATAAAAGACAATATCATAAAACGGGACTATCGAGGAGTTTTTTTTTTGGTTGAGCATCTA
TTGAGGTTGACTTTTCCTTTGACTTTCCGGTGAGCATCTATCGAGGTTTACCTTTTCTTTGAATTTTT-TTGAGACAATT
CGCGAAGCCTTTATTAATCCGTCACCACAGTTACAGGGATGAAAGAAAGATTATTGGGGTGGCCTAACTAGACACGGTGA
CCCGCCCCTAACTTTAGAGCATGCTTGCTAAATTTTATGAGCCTCGACATTTGAGCCCCTAAACTCATGAACAAAATTAC
ATAAAGTAAAGCTACGAGAATGTTCTATGATCTCGTGAATAATTGCACCGTAAACTGTCCCATTAATCTGCTTGATGTCA
TCGACCACA
>chr3D_314
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------TATGCTT
AACTCTGATTCTCATCAATTTCTGTCCAGTGCTCTGCGTACCTATTGAACTTCAGGATTACCATACTTGCACACTACATT
GCTCCATGGAGGATCTCCCGGAGGAACTGTTTGCAGAGTTTCTCAAAAGGATCACCAGGACAAGTGATCTGAATTCTGTT
TCCCTTGTGTCGAAGCGGCTCTACAAGATTGAGGCAGATCAGAGGGGTGCTATCCATGTTGGCTGTGGCCTTTTCTCTGC
TACAGAAGCCTTGGCATCGCTGTGCACCCGATTCCCTAATTTGTGTAAAGTGGAAATCGACTACTCTGGTTGGACGGCAG
GCCATGGCAATCAGTTGGAAAACCAAGGCATCTCTGTGTTATCATCTCACTGCCCCTCGCTGACTAGTCTCGGTTTAAGC
TTTTGCTCATACATTGATGACTCTGGTCTTGGTTATCTAGCCTGCTGCAAGAAACTAGCGTCCCTCAGATTGGCCTCCAC
ACCAAACATAACTTCAAGAGGGCTTCTCACCGTGGCTGTTCATTGCAAGTGTCTTTCTGCTCTCCACATTATTGACTGCC
ATA--AAGTAGGTAGCAAAGATTGGTTGGAGTACCTTGGCTCTGTAGGATCATTGGAATAGCTTGTAGTAAAGAAGTGCG
AGGGCATCAGCCAGGATGACCTCCTGAAGTTTGGCCCAGGATGGATAA-TCTACAGAAGTTTGTGTTTGAAATCAAGAAA
AGATTCTTTCGTAATGACGGGGCAGGGCCTGGTGAGGGCTATGATCCCTCATACGACCCTCATAGCCTGAATATGTATGA
TTTCAGTTGTGAGAATATGAAGGACTTGAGGTTGGCAGGTATCGAAATTGCGACAGGAAAAGGACTTCGTTTTCTCTTTG
GGAGGTGCAAAGCACTGGAGAAGCTTTGCTTGGAGTATGTTCGGGGTCTAAATGACAACGACATGATTGCATTATCCCAG
AGCTGCAACAATCTTAAAAGCATCTCACTTTGGCTGGATCCTCAGAATTATTAC---------------GATACTTTCAG
GACGGCATTTACTGATAACAGCCTTAAGGCTCTATCTCTCAGTTGCCCTATGCTTGAGAGTGTTGATCTCACATTTTCAG
GTTGCTCTGCCATCTACACATCAGAAATAGGCTTCACACGGAAGGGCCTAGTGGCTCTCATTAAGTCTTGCCCGATTCGT
GTTCTCGTGCTAAGGGGTGCCAACTTCTTTAATGACAAAGGGATGAAGGCCGTCTCATCTGCTCCATTACTGGAGACACT
CGAGCCATTGGATTGCAAGGCCATAAGTAATGCTGGGCTACGGTTCATTGTGCGTGCCCCATGCTTGATTAATCTCATGC
TCCGGCTCTGTGACCGTGTGACTAATGCTGGAGTATCGAAGCTGGCACATTCACAGAAGTTAGAGTCTCTGATCATTGAA
CGTTGTTCCCGGGTCTCTGAGCAGGCTGTG--------------------------------------------------
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>chr3D_389
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---------------------------------------------------------------------ACAGCTGAATT
GTTCGATGGAGGACCTACCGGAGGCTCTGCTGACAGAGATTCTCAACAGGATCACCACGACAAGTGATCTGAATTCTCTT
TCCCTTGTGTCAAAGCAGCTCTACAGGATAGAGGGGAATCAAAGGGATGCTATCCGTGTTGGTTCCGGTCTTTGCACTGC
TACAAAAGCACTGACATCATTGTGCGGCCGCTTCCCAAATTTGCGGAAAGTGGAAATTGATTACTCTGGTTGGATACCTG
GACATGGAAAGCAGCTGGATAACAAAGGCCTTTCTGTGTTTTCATCTCACTGTTCCTCGCTGATTGATCTCACATTAAGC
TTCTGCTCACACATCGATGACTCTGGGCTTGGTTGCTTAGTGAATTGCAAGAAATTGGTGTCTCTCAGGCTGAACTCCAC
ACCACAAATAACTTCGATTGGGCTTTTCTCGGTTGCAGTTGGTTGCACAAGTCTATCTGCTCTCCACCTTATTGATTGCG
--AGGAAATCGACAATGTAGAGTGGCTGGAATACCTTGGAAGGGATGGATCATTGGAAGAGCTTGTAGTGAAGAATTGCA
AAGGAATCAATCATCATGACTTCATAAAGTTTGGTTCAGGATGGATGAAGCTCCAGAAGTTTGAGTTTGAGAGGAAAAGA
GGTAGATATGATCTTCTTGATCCAGGTAATGTTGT---CTATGACTCCTCGTATGATGCTCACAACATGGATATATATGA
TTTCTGCTGTGAGAGTTTGAAGGATTTAAGGTTGGCGCATATTGAAACTTGGCCAGAAGCAGGACTTCGAGTTCTCCTAG
GAAAGTGTAAAGCATTGGAGAAGCTTTGCCTTCAGTATGTTCGTGCCCTAAATGATAATGACATTATTGCATTATCTCGG
AGCTGCAGCAACCTTAAAAGAATCTCACTTTGGCTTAACCTGCAGCGCTACTCTAGTGATGTCAACTATTGTGAGACCAG
GACATCATTTACTGATAAGAGCCTTTACGCTCTAGCCCTCAACTGTCGTATGCTTCAGATGATAGACCTCAGCTTTACAG
GATGTGATGCCGACTGGCCATCAGAAATAGGATTCACACAAGAGGGTTTTCTGGTGCTCATTCAGTCCTGCCCAATTCGT
GTTCTTGTGCTCAACAACGCCAACTTCTTTGATGACGAGGGGATGAAGGCCCTCTCATCCTTGCCTCATCTGGAGACACT
TGAGCTTATATTGTGTCATGCGGTAACTGATGCCGGGATGCGCTTCATTGCGCACACCCCATGCTTGAGTAATCTCACAC
TTCGGATGTGTCATAACGTTACTGATGTTGGAGTGGCTGAACTGGAAGATGCTCAGAAGTTAGAGTCTTTGGTCATCGA-
--------------------------------------------------------------------------------
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>chr3B_398
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------------------------TT
GCTCGATGGAGGATCTCCCAGAGGAACTGTTTGCAGAATTTCTCAAAAGGATCACCAGGACAAGTGATCTGAATTCTTTT
TCCCTTGTGTCGAAGCGGCTCTACAAGATTGAGGGAGATCAGAGGGGTGCTATCCATATTGGCTGTGGCCTTTTCCCTGC
TACGGAAGCCTTGGCATCGCTGTGCACCCGATTCCCTAATTTGTGTAAAGTGGAAATCGACTACTCTGGTTGGACGGTAG
GCCATGGCAATCAGTTGGACAACCAAGGCCTCTCTGTGTTATCATCTCACTGCCCCTCGCTGACTAGTCTCGGTTTAAGC
TTTTGCTCATACATCGATGACTCTGGTCTTGGTTATCTAGCCTGTTCCAAGAAACTAGCGTCCCTCAGGTTGACCTCCAC
ACCAAACATAACTTCAAGAGGGCTTCTCACCGTGGCTGTTCGTTGCAAGAGTCTTTCTGCTCTCCACCTTATTGACTGCC
ATA--AACTAGGTAGCAAAGATTGGTTGGAGTACCTTGGCTCTGTAGGATCATTGGAAGAGCTTGTAGTAAAGAAGTGTG
AGGGCATCAGCCAGGATGACCTCCTGAAGTTTGGCCCAGGATGGATAAATTTACAGAAGTTTGTGTTTGAAATCAAGAAA
AGATTCTTTCGTAATGACGGGGCTGGGCCTGGTGAGGGCTATGATCCCTCATACGACCCTCATAGCCTGAATATGTATGA
TTTCAGTTGTGAGAATATGAAGGACTTGAGGTTGGCAGGTATCGAAATTGCGACAGGAAAAGGACTTCGTTTTCTCTTTG
GGAGGTGCAAAGCACTGGAGAAGCTTTGCTTGGAGTATGTTCGGGGTCTAAATGACAACGACATGGTTGCATTATCCCAG
AGCTGCAACAATCTTAAAAGCGTCTCACTTTGGCTGGATCCTCAGAATTATTAC---------------GATACTTTCAG
GACGGCATTTACTGATAACAGCCTTAAGGCTCTATCTCTCAGTTGCCCTATGCTTGAGAGTGTTGATCTCACATTTACAG
GTTGCTCTGCCATCTACACGTCAGAAATAGGCTTCACACGGAAGGGCCTAGTGGCTCTCATTAAGTCTTGCCCGATTCGT
GTTCTCGTGCTAAGGGGTGCCAACTTCTTTAATGACAAAGGGATGAAGGCCGTCTCATCTGCTCCATTACTGGAGACACT
CGAGCTTGTGGATTGCCAGGCCATAAGTAATGCTGGGCTGCGGTTCATTGTGCGTGCCCCATGCTTGATTAATCTCACGC
TCCGGCTCTGTGACCGTGTGACTAATGCTGGAGTATCGAAGCTGGCACATTCACAGAAGTTAGAGTCTCTGATCATTGAA
CGTTGTTCCCGGGTCTCTGAGCAGGCTGTG--------------------------------------------------
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---------
>chr6A_401
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-CTCGATGGAGGGTCTCCCAGAGCCACTGCTTGGAGAGATCGTCAAGAGGATTACCAAGACAAGTGATCTTAATTCTCTT
TCCCTCGTGTCGAAGCAGCTCTCCACCATCGAGGCGGAGCACAGGGTTGCTATCCGTGTTGGCTGTGGACTCAATCCTTC
AACAGAAGCCTTGGTATCGCTGTTTTCCCGGTTCCCCAATTTGGCAAAAGTAGAGATCAATTACTCTGGGTCGAAGTCCA
GTAACGTGGACCAGTTGAACAACCAAGGCCTACTTGTTTTATCATCTCACTGCTCCTTGCTGTCCGATCTTGCTTTAAGC
TTCTGCTCAAACATCGATGACACTGGTCTAGGTTATCTAGCTGAGTGCAAAAAATTGAGGTCCCTCAGGCTGAACCATGC
ACCAGCAGTCACTTCTACTGGGATTCTTCGGGTGGCGGTTGGTTGCAGGTATCTTTCGGTTCTCCACCTTGTTGACTGTA
--CAGCAGTAGACAGCGGGGAGTGGCTGGAGTACCTTAGGAGGTATGGATCACTGGGGGAACTTGTTGTAAAGGATTGCG
ATGGTATCAGCCAGTATGACCTCTTAAAGTTTGGCCCAGGATGGTTGAATCTCCAAAAGTTTGAGTTCGAGATTAATGGA
AATTACTGGGTGCCAGGGGCCCG------------------TGATCCCTCCTACGTGTCTGGCTACCCATATAGCTATGA
CATCTGCTGTGATAATCTGAAGGATCTTAGGCTGGCTCATATAATAACTGAGCCAGAAATTGGACTTCGTTTTCTCTTGG
GGAAGTGCAAAGCATTGGAGACACTTTACCTGGAGTATGTTATTGGTCTAAATGAGAATGAGATGATTGCACTATTCCAG
AGGTGCAGCAACCTTAAAACCATCTCACTTCGTCTCATGCCTCTGCGATGTG------------AAGATGGTGAGTTTAG
GACGCCATTGACTGATGCTAGCCTTAAGGCTCTAGCTCTTAGCTGCCCTATGCTTCAGGTTATTGAGCTCACCTTCACAT
TTTGCGATCCCATTTATCCTACTGAAATAGGCTTCACACAAGAGGGTATTGTAACGCTCATCCAATCATGTCCGATTCGT
GCTCTTGTTCTAAATGGTGCCAGCATTTTTTATGACGAGGGGATGAAGGGCCTCTCATCCTCACAGTTTCTGGAGAAGCT
CGAGCTCGTGGATTGCAGGTCTATAACTGATGCTGGTATGAACTTGATTATACAGGCTCCTCGCTTGAGCAGTCTCACGC
TCCGCAAATGTAAGAGAGTGACAGATGATGGAATGGCTGCCTTGGCACGTGCACAGAAGCTGGAGTGGCTGACCGTTATA
AGCTGCCGCCGGATCTCTCAGGAAGGC-----------------------------------------------------
--------------------------------------------------------------------------------
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---------
>chr6D_401
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-CTCGATGGAGGGTCTCCCAGAGCCACTGCTTGGAGAGATCGTCAAGAGGATTACCAAGACAAGTGATCTTAATTCTCTT
TCCCTCGTGTCGAAGCAGCTCTGCACTGTCGAGGCGGAGCACAGGGATGCTATCCGTGTTGGCCGTGGACTCGACCCTTG
AACAGAAGCCTTGGTATCGCTGTTTTCCCGGTTCCCCAATTTGGTAAAAGTAGAGATCAATTACTCTGGGTCGAAGTCCA
GTAACGGGGACCAGTTGAACAACCAAGGCCTACTTGTTTTATCATCTCACTGCTCCTTGCTGTCTGATCTTGCTTTAAGC
TTCTGCTCATACATCGATGACACTGGTCTAGGTTATCTAGCTGAGTGCAAAAAATTGAGGTCCCTCAGGCTGAACCATGC
ACCAGCAGTCACTTCTACTGGGATTTTTCGGGTGGCGGTTGGTTGCAGGTATCTTTCGGTTCTCCACCTTGTTGACTGTA
--CAGCAGTAGACAGCAGGGAGTGGTTGGAGTACCTTAGGAGGTATGGATCACTGGGGGAACTTGTTGTAAAGGATTGCG
ATGGTATCAGCCAGTATGACCTCTTAAAGTTTGGTCGAGGATGGTCGAATCTCCAAAAGTTTGAGTTCGAGATTAATGGA
AATTACTGGATGCCAGGGGCCCG------------------TGATCCCTCCTACGTGTCTGGCTACCCATATAGCTATGA
CATCTGCTGTGATAATCTGAAGGATCTTAGGTTGGCTCATATAATAACTGAGCCAGAAATTGGACTTCGTTTTCTCTTGG
GGAAGTGCAAAGCATTGGAGAAACTTTACCTGGAGTATGTTATTGGTCTAAATGAGAATGAGATGATTGCACTATTCCAG
AGGTGCAGCAACCTTAAAACCATCTCACTTCGTCTCATGCCTCTGCGATGTG------------AAGATGGTGAGTTTAG
GACGCCATTGACTGATGCTAGCCTTAAGGCTCTAGCTCTTAGCTGCCCTATGCTTCAGGTTGTTGAGCTCACCTTCACAT
TTTGCGATCCCATTTATCCTACTGAAATAGGCTTCACACAAGAGGGTATTATAACGCTCATCCAATCATGTCCGATTCGT
GCTCTTGTTCTAAATGGTGCCAGCATTTTTTATGACGAGGGGATGAAGGGCCTCTCATCCTCACAGTTTCTGGAGAAGCT
CGAGCTCGTGGATTGCAGGTCTATAACTGATGCTGGTATGAATTTCATTATACAGGCTCCTTGCTTGAGTAGTCTCACGC
TCCGCAAATGTAAGAGAGTGACAGATGATGGAATGGCTGCCTTGGCACGTGCACAAAAGCTGGAGTTGCTGATCGTTATA
GGCTGCCGCCGGATCTCTCAGGAAGGCGTGCAGAGAGCTGCCAAATCAGTTCA---------------------------
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>chr6B_401
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-CTCGATAGAGGGTCTCCCAGAGCCACTGCTTGCAGAGATCGTCAAGAGGATTACCAAGACAAGTGATCGTAATTCTCTT
TCCCTTGTGTCGAAGCAGCTCTGCATCGTCGAGGCGGAGCACAGGGATGCTATCCGTGTTGGCTGTGGACTCAATCCTTT
AACGGAAGCCCTGGTATCGCTGTTTTCCCGGTTCCCCAATTTGGCAAAAGTAGAGATCAATTACTCTGGGTCGAAGTCCA
GTAACGGGGACCAGTTGAACAACCAAGGCCTACTTGTTTTATCATCTCACTGCTCCTTGCTGTCCGATCTTGCTTTAAGC
TTCTGCTCATACATCGATGACACTGGTCTAGGTTATCCAGCTGAGTGCAAAAAATTGAGGTCCCTCAGGCTGAACCATGC
ACCAGCAGTCACTTCTACTGGGATTTTTCGGGTGGCGGTTGGTTGCAGGTATCCTTCGGTTCTCCACCTTGTCGACTGTA
--CAGCAGTAGACAGCGGGGAGTGGCTGGAGTGCCTTAGGAGGTATGGATCACTTGGGGAACTTGTTGTAAAGGATTGCG
ATGGTATCAGCCAGTATGATCTCTTAAAGTTTGGCCCAGGATGGTCGAATCTCCAAAAGTTTGAGTTCGAGATTAATGGA
AATTACTGGGTGCCAGGGGCCCG------------------TGATCCCTCCTACGTGTCTGGCTACCCATATAGCTATGA
CATCTGCTGTGATAATCTGAAGGATCTTAGGTTGGCTCATATAATAACTGAGCCAGAAGTTGGACTTCGTTTTCTCTTGG
GGAAGTGCAAAGCATTGGAGACACTTTACCTGGAGTATGTTATTGGTCTAAATGAGAATGAGATGATTGCACTATTCCAG
AGGTGCAGCAACCTTAAAACCATCTCACTTCGTCTCATGCCTCTGCGATGTG------------AAGATGGTGAGTTTAG
GACGCCATTGACTAATGCTAGCCTTAAGGCTCTAGCTCTTAGCTGCCCTATGCTTCAGGTTGTTGAGCTCACCTTCACAT
TTTGCGATCCCATTTATCCTACTGAAATAGGCTTCACACAAGAGGGTATTGTAACGCTCATCCAATCATGTCCGATTCGT
GCTCTTGTTCTAAATGGTGCCAGCAGTTTTTATGATGAGGGGATGAAGGGCCTCTCATCCTCACAGTTTCTGGAGAAGCT
TGAGCTTGTGGATTGCATGTTTATAACTGATGTTGGTATGAGTTTCATTATACAGGCTCCTAGCTTGAGTAGTCTCACGC
TCCGCAAA---AAGAGAGTGACAGATGGTGGAATGGCTGCGTTGGCACGTGCACAGAAGCTGGAGTCGCTGATCGTTATA
GGCTGCCGCCGGGTCTCTCAGGAAGGC-----------------------------------------------------
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>chr3B_1161
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-----------------------------------------------------CAGGAAAAGGACTTCGTTTTCTCCTTG
GGAGGTGCAAAGCACTGGAGAAGCTTTGCTTGGAGTATGTTCGGGGTCTAAATGACAACGACCTGATTGCATTATCCCAG
AGCTGCAACAACCTTAAAAGCATCTCACTTTCGCTGGATCCTCAGTACTATCAC---------------GATGATTTCAG
GACGGCATTTACTGATAACAGCCTTAAGGCTCTAGCTCTCAGCTGCCCTATGCTTGAGACTGTTGAGCTCACATTTGCAG
ATTGTTCTCCCATGTACCCGTCAGAAATAGGCTTCACACGGAAGGGCCTAGTGGCTCTCATTCAGTCTTGCCCGATTCGT
GTTCTCGTGCTAAGGCGCGCCAACTTCTTTAATGACAAGGGGATGAAGGCCCTCTCATCTGCTCCATTACTGGAGACGCT
CGAGCTTGTGGATTGCGAGGCTATAACTAATGCTGGGCTGGGTTTCATTGTGCATGCCCCATGCTTGATTAATCTCACGC
TCC---TCTGTGAAGGTGTGACTGATGTTGGAGTATCGAAGCTGGCACATTCACAGAAGTTAGAGTCTCTGATCATTGAA
CGCTGTTGCTGCGTCTCTGAGCAGGCAGTG--------------------------------------------------
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>chr3D_1161
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-----------------------------------------------------CAGGAAAAGGACTTCGTTTTCTCCTTG
GGAGGTGCAAAGCACTGGAGAAACTTTGCTTGGAGTATGTTCGGGGTCTAAATGACAACGACATGATTGCATTATCCCAG
AGCTGCAACAACCTTAAAAGCATCTCACTTTCGCTGGATCCTCAGTACTACCAA---------------GATGATTTCAG
GACGGCATTTACTGATAACAGCCTTAAGGCTCTAGCTCTCAGTTGCCCTATGCTTGAGAGTGTTGATCTCACATTTTCAG
GTTGTGATACCATGTACCCGTCAGAAATAGGCTTCACACAGAAGGGCCTAGTGGCTCTCATTCAGTCTTGCCCGATTCGT
GTTCTCGTGCTAAGGGGTGCCAACTTCTTTAATGACAAGGGGATGAAGGCCCTCTCATCTGCTCCATTACTGGAGGCCCT
CGACCTTGTGGATTGCGAGAGCATAACTGATGCTGGGCTGCGTTTCACTGTGTGTGCCCCATGCTTGATTAATCTCACGC
TCCGGCTCTGTGAAAGTGTGACTAATGTTGGAGTATCGAAGCTGGCACATCCACAGAAGTTAGACTCTCTGATCATTGAA
CGATGTTGCCAGGTCTCTGAGCAGGCTGTG--------------------------------------------------
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>chr3A_1161
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-----------------------------------------------------CAGAAAAAGGACTTCGTTTTCTCTTTG
GGAGGTGCAAAGCACTGGAGAAGCTTTGCTTGGAGTATGTTCGGGGTCTAAATGACAACGACATGATTGCATTATCCCAG
AGCTGCAACAATCTTAAAAGCATCTCACTTTGGCTGGATCCTCAGAATTATTAC---------------GATACTTTCAG
GACGGCATTTACTGATAACAGCCTTAAGGCTCTATCTCTCAGTTGCCCTATGCTTGAGAGTGTTGATCTCACATTTTCAG
GCTGCTCTGCCATGTACACGTCAGAAATAGGCTTCACACGGAAGGGCCTAGTGTCTCTCATTAAGTCTTGCCCGATTCGT
CTAATCGTGCTAAGGGGTGCCAACTTCTTTAATGACAAAGGGATGAAGGCCCTCTCATCTGCTCCATTACTGGAGACACT
CGAGCTTGTGGATTGCAAGGCCATAAGTAATGCTGGGCTACGGTTCATTGTGCGTGCCCCATGCTTGATTAATCTCACGC
TCCGGCTCTGTGACCGCGTGACTAATGCTGGAGTATCGAAGCTGGCACATTCACAGAAGTTAGAGTCTCTGATCATTGAA
CGTTGTTCCCGGGTCTCTGAGCAGGCTGTG--------------------------------------------------
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>SNPs
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---------------------------------------------------------------S----------------
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-------------------------------------------------S------------------------------
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-------------------------------------------------S--------S---------------------
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-S------------------------------------------------------------------------------
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------------------------------------------------------------------------S-------
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---------------------S----------------------------------------------------------
----------------S---------------------------------------------------------------
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------S---------------------------S----------------------S----------------------
-------------------------------------------------S------------------------------
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--------------S--------------------------------------------S--------------------
---------------------------------------------------------------------------S----
-------S----------------------------------S-------------------------------------
--------------S------------------------S-----------------S--------S-------------
--------------------------SS-----S-----------------S----------------S-----------
-SS------------------------------------S--------S----SS-SS----------S----------S
----------------S--------SSSSS--S---------S--------S----------------------------
--------------S----------------------------------S---S--------------------------
----S----
>forward_530
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------------------------------GAGGCATCACAAAGGGGTGT------------------------------
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>reverse_2680
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---------------------------------------GACGGGACTATCGAGGAGGT---------------------
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---------
