>input_sequence_66705
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------------------------------------------------------------AT------------------
---GAAGGACG---AAAAA---CAGGCTGAGAAGGAGTACGCTGATTTCGAGGCGAGGGTCAAGAGGACGATATACATCG
ACCACCTCTCCCCTCTGGTCACCAGCCAGGTCATCAAGGCGTCTCTCGCCCAGTGCGCCAATGTCGTCAACACGGAGTTC
ATCGAGAACTACACGATCGAGTACGAGATCCCCGCCGCTGCGTTGGTGGAGGTGGACAACGTGTCGCAGGCCCAGGCTGC
TGTGGACCTGATGAACAACTTCCCTTTCATGCTCGGCGGGATGCCCAGGCCTGTGAGGGCTGCCTTTGCAAAGCCCGAGA
TGTTTCCGGACCGCCCTAGGAAGCCTGGCTTGAAGATTGAGTTCAGCTGGGTAAAGCAGGGAGATCCGGGGTATGATGGG
ATGAATAAGCTCAAGGGCCTTATGAGGAGGCAAGAAGCAGAAAATATGGCACTCATCAAGGTGAAGTGGT-GTTTCTTTA
GTTTTTTATA--CTGTTCTTATCATGTACCTGTATGCCCAGT--------------------------------------
-------------------------------------------------TGCCCACTACTGAGAAAAGTTGCAAATCTTT
CTG----------CTTGTC---TAAAATGAGAAAAACACTTGCTCAGGGAACAGGAGATGTCAAGC------------AT
AATTTGAGAATTTTGATGATGATGCTGTTCTTTAAAATGTGATACAGTTGCTTTAAACCTCATTTCTTCTGTATCCGAGC
CATAATTTCATTAAACTCTGTTTTTCTTTTTGTTTCAGAATCAATTGGAAGAGGAGAAGGAGCTGGCGGCGCAGCAGCAG
GAAACCCTGGTAGCAAACAGCAATAAGTACGACATGCTGGAGAACCTCGTGAACAACGGGGAAATCACTAAACTCGCTCA
GCATTACAAGGTCAAGCTGGGCGACGACTGA-------------------------------------------------
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>chr2D_1_TraesCS2D01G581300
CGTCGCCGCCGACCAACGGCTCAATCCCGCCGG-CCTGCCGGCCGACGCCTCAGCCCCACTCCCAGCCGCCCCAATCACA
CGCCCCGTGCCGCCCCCGCCCCTCACGCGCGTCGCCGCCGCCG--CCGCCGCCGCGGGCTCCGTTCTTCCTCGTCTGGAC
ACCGCGCTCCCGCCGCCTCCGCTCCGCCCCGCCCACCCATTG-----GGTTTCGAGGTA-GAGGTTTCCCCATCTTCATC
CCACGATTAAGTTCAATAGAAATCCCGCTGGACCTCACGGCTTGTGGGCGCACGCCGTCTAGATCCGCCGCCCCTGCAGT
TGCTGTGTCTGTGA-GGAACGGCTTGTTA---GCT-----GGATAGT----GGAGGATTTTACTTTTGCATGTTTG----
ATCTGAGTCATGTGCTGAGCCATGTTCATCAACTTT------------GTCTCGCCTCGCGGTTTCCCTTTTA-ACTTTC
CCTCCCGA---TGCTTGACTAG---GTAGTTGCATTTGGGGTGCTTGCTTGTTCT------CTTTGAGG--------CAA
TTTGTAGGTTTCTACTAATGG--AATTTTGGCAGCTCCCCTTTCATCAAAAAAGGCTTGTTCGAGGAAATCCT--AAACT
GAACCCGCATGCCGGCCCCTGTTTCTT------GATGAAGCCTTGAAATTTTTT----GGAGCCATATCCCTACCCTTAC
ATCCAGG----------------AGATAGATGAACAACCCTCCACTGCTGTTAGTTAATACA------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
GAGTAGTTATCTTTGATGTTTGATAGTTTTATAAGTGTAAAGCCGGTAGACGCTTTTGCTGCACAACGCTTGTTCTTATC
CAGATGATGCCCTT---AAGATGTTGTTTTTTATGTTTGTCAGATCTGTTTATAAATCTTTGTTGTTTGCCAGCTCTG-T
TCATAAC--------------------------------------------------------CTTTTGCAG---TGTTC
ATTCTTAATTAT--TCGGAGGAAATCTT----AGCCATT----TCGAGTGACTGCTGCTGTGTATTGTTATTTCCAGCAG
AGGTCGTGCTTCGCTCCTATGGCGGCATCCGACGAAATGGCTCAGAAGGACGAAGATGATAT------------------
---GAAGGACG---AAAAA---CAGGCTGAGAAGGAGTACGCTGATTTCGAGGCGAGGGTCAAGAGGACGATATACATCG
ACCACCTCTCCCCTCTGGTCACCAGCCAGGTCATCAAGGCGTCTCTCGCCCAGTGCGCCAATGTCGTCAACACGGAGTTC
ATCGAGAACTACACGATCGAGTACGAGATCCCCGCCGCTGCGTTGGTGGAGGTGGACAACGTGTCGCAGGCCCAGGCTGC
TGTGGACCTGATGAACAACTTCCCTTTCATGCTCGGCGGGATGCCCAGGCCTGTGAGGGCTGCCTTTGCAAAGCCCGAGA
TGTTTCCGGACCGCCCTAGGAAGCCTGGCTTGAAGATTGAGTTCAGCTGGGTAAAGCAGGGAGATCCGGGGTATGATGGG
ATGAATAAGCTCAAGGGCCTTATGAGGAGGCAAGAAGCAGAAAATATGGCACTCATCAAGGTGAAGTGGT-GTTTCTTTA
GTTTTTTATA--CTGTTCTTATCATGTACCTGTATGCCCAGT--------------------------------------
-------------------------------------------------TGCCCACTACTGAGAAAAGTTGCAAATCTTT
CTG----------CTTGTC---TAAAATGAGAAAAACACTTGCTCAGGGAACAGGAGATGTCAAGC------------AT
AATTTGAGAATTTTGATGATGATGCTGTTCTTTAAAATGTGATACAGTTGCTTTAAACCTCATTTCTTCTGTATCCGAGC
CATAATTTCATTAAACTCTGTTTTTCTTTTTGTTTCAGAATCAATTGGAAGAGGAGAAGGAGCTGGCGGCGCAGCAGCAG
GAAACCCTGGTAGCAAACAGCAATAAGTACGACATGCTGGAGAACCTCGTGAACAACGGGGAAATCACTAAACTCGCTCA
GCATTACAAGGTCAAGCTGGGCGACGACTGATGGGTTCCCGACGTTCAAGCTCCTCCCTCGGAGACTGACTGCAGTCACC
AGTGCAAGCAGATTCTTGTTCCGCCCAGGGCATCCCCACTCACAGATGCGATGGCGTGATAGTGATAATCCATTGGCTAG
TTCTCATCTTGTGCTGGGATGATAGTAATAAAGCATTGATTTGTTTGGTGCGTCCGTGCTCTAGTTGTGGCCAGCTGCAA
AGCAGCAGTTCCTTAGTGTAACAACTGTC-GATACATTATGATCCGATCAGTTGATGGTACGCTTGGTGTAATAATAATC
TTTGTATGACCTCCAAGC-TTAGCATGTCAGCAAGATGATCCAACGATGTCTGATATTGTCTCCTGCATTGCTTGAAACT
TGCT---TGATATCGG---ATATGTCGGTGCTCGCGGTTCAGTCCTGTCTGGCA--------------------------
---------------------------------------------------------GTTCTGTTGCTAGCTTGAGATGT
TTTATGTTGGTCCTGATGCCTGAAGGTGTGTTGTTGCTTGAAGCAGGAGGGAATCATGTCTCTGCCTTGTG----TTCCC
AGGAATGGACA-CAATGTCACGGTCACAAGTGCCATGTTCCCAAGTCTTGGAACACAGGAAAAGGAGGTTCTGCCTGGCT
GGCTGGAGAATCTGAGGAGGAAATGGCAAGAGGAAGCAAGGAAGGAGGCCATGGCAAGCAAGGTTTGTCCATTCATGGTA
TGCCTCACCTGAACCTCCCTCTCACGTATTCTCTCTTTGTGTT----TACTTGCTCTTAAAAATTATCTCACCTGCTGTG
TTGTTATCAGCAGTATATCTACCTACCTG--TATACAGCCATACACATCACCAGAGG-TTTTTCACTGTTGTTGCTGCAC
---CTGAATCTGCAATGGGTAGGTCCCCAGGGCCAAGGAGGGGGAGTGCCCTGCTTCTGCCTCTGTTTCTCACCTGCTTC
TTCTCAGGTACCACTCTTCACAATCAAATTT---------CTTCATCTTCTCCTCTTGCTTTCTGCATACTCTTGCTGGG
A-TAAGATTGTGTCAGGTTTTCTGACT
>chrUn_1
CGGCGCCGCCGACCGACGGCTCAATCCCGCCGGGCCTGCCCGCCGACGCCTCAGCCCCACTCCCCGCCGGCCCAATCCCA
CGCCTCCCGCAGCCCCCGCCTCTCACGCGT---------G--------CCGCCGCCGGCTCCGTTCTTCCTCGTCTGGAC
ACCGCGCTCCGGCCGTCTCCGCCCCGTCCG-----CCCAGTG-----GGTTTCGAGGTA-GAGGTTTCCCCATCTTCATC
CCGCGATTAAGTTCAATAGAAATCCCGCTGGACCTCACGGCTTGTGGGCACACGCCGTCTAGATCCGCCGCCCCTGCAGT
TGCTGTGAG-GTGA-GGAACGGCTTGTTA---GCTACAGTGGATAGC----GCAGGATTTTATCTTGGCTTGTTTG----
ATCTAAGTGATGTGCTGAGCCATGTTGATGAACTTTTGCGTGCGCTTTGTCTCGCCTCGCGGTTTCCTTTTTA-ACTTTC
CCTCCCGA---TGCTTGAGTATGTAGTAGTAGCATTTGGGGTGGTTGCTTGTTCTTGTTCTCTTTGAGG--------CAA
-TTGTAGGTTCCTATTAATGGAAAATTTGGGCGGCTGCCCTTTCATCAAAGA-GGCTTGTTCGAGGAAATTCT--AAGCT
GAACCCGCATGCCGGCCCCTGTTTCTG------GATGAAGCCTTGAAATTTTTT----GGAGCCACATCCCTACCCTTAC
ATCCAGG----------------AGATAGATGAACAACCCTCCACTGCTGTTAGTTAATG--------------------
-------------------------------------CTCCCTCCGTTCCTAAATATAAGTCTTTTTAGAGTGTAGATAG
CAAAATAAGTGAATCTACACTCTGAAAGGACTTA---------------------------TATTTAGGAACGGAGGGGG
GAGTAGTTATC-TTGATGTTTGATAATTTTACAAGTGTAAAACCTGTAGACGCTTTTGCTGCAGAATGCTTGTTCTTATT
CAGATGATAGCCTTTAGAAGATGTTGTTTTTGTTGTTTGCCAGCTCTGTTTATAAATCTTTGTTGTTTGCCAGCTCTG-T
TTATAAC--------------------------------------------------------CTTTTGCAG---TGCTT
ATTCTTAATTAT--TCCGATAAAATCTT----AGCCATT----TCGATTGACTGCTGCTGCTTATTGTTATTTCCAGCAG
AAGTCGCGCTTCGCTCCTATGGCGGCATCCGACGAAATGGCTCAGAAGGACGAACATGATATGAAGGACGAACAACAGGG
TGACAAGGACG---AAAAA---CAGGCTGAGAAGGAGTACGCTGATTTCGAGGCGAGGGTCAAGAGGACGATATACATCG
ACCACCTCTCCCCTCTGGTCACCAGCCAGGTCATCAAGGCGTCTCTCGCCCAGTGCGCCAACGTCGTCAACACCGAGTTC
ATCGAGAACTACACGATCGAGTACGAGATCCCCGCCGCTGCGTTGGTGGAGGTGGACAACGTGTCTCAGGCCCAGGCTGC
TGTGGACCTGATGAACAACTTCCCTTTCATGATCGGCGGGATGCCCAGGCCTGTGAGGGCTGTCTTTGCAAAGCCCGAGA
TGTTTCCGGACCGCCCTAGGAAGCCTGGCTTGAAGATTGAGTTCAGCTGGGTAAAGCAAGGAGATCCAGGGTATGATGGG
ATGAATAAGCTCAAGGGCCTTATGAGGAGGCAAGAAGCAGAAAATATGGCACTCATCAAGGTGAAGTGGTTGTTTCTTTA
GTTTTT--TATACTGTTCTTATTATGTACTTGTATGCCCAGT--------------------------------------
-------------------------------------------------TGCCCACTACTGAGAAAAGCTGCAAATCTGT
CTG-----CTTTACTTGTC---TAGAATGAGAAAAACACTTGCTCAGGGAACAGGAGATGTCAAGC------------AT
ATTTTGAGAATTTTGATGATGATGCTGTTCTTTAAAATGTGATACAGTTGCTTTACACCTCGTTTCTTTTGCATCCGAGC
CATAATTTCATCAAACTTTGTTCTTCTTTTTGTTTCAGAATCAATTGGAAGAGGAGAAGGAGCTGGCGGCGCAGCAGCAG
GAAACCCTGGTAGCAAACAGCAATAAGTACGACATGCTCGAGAACCTCGTGAACAACGGGGAAATCACTAAACTCGCTCA
GCATTACAAGGTCAAGCTGGGAGACGACTGATGTGTTCCCGACGTTCAAGCTCCTCCCTTGGG----GACTGCAGTCACC
AGTGCAAGCAGATTCTTGTTCTGCCGATGGCATCCCCACTCACAGATGCGATC----------GATAATCCATCGGCTAG
TTCTCATCTTGTGGTGGGATGATCGTAATAAAGCATTGGTTTGTTTGGTGCAGCCGCGCTCTAGTTGTGGCCAGCTGCAA
AGTAGCAGTTCCTTAGTGTAACAACAGT------------GGATACAT----------TACGCTTGGTGTAATAATAATA
TTTGTATGACCTCCAAGCCTTAGCATGTCAGCAAGATGATCCAACGATGTCTGATATTGTCTCCTGCATTGCTTCAAACT
TGCT---T---ATAGG---ATATGTCGGTGCCCGTGGTTCAGTCCTGTCTGGCAGCTCTGTTGTTAGCTTGTCTCCTGCA
TTGCTTCAAACTTGCTTATAGGATATGTCGGTGCCCGTGGTTCAGTCCTGCCTGGCAGTTCTGTTGCAAGCTTGAGATGT
TTTATGTTGGTCCTGATTCCTGAAGGTGTGTTGTTGCTTGAAGCAGGAGGGAATCATGTCTCGGCCTTGTG----TTCCC
AGGAATGGACAACAATGTCACAGTCACAAGTGCCATGTTCCCAAGTCTTGGAACACAGGTAAAGGAGGTTCTGCCTGGCT
GGCTGGAGAATCTGAGGAGGAAATGGCAACTGGAAGCAAGGAAG----CCATGGCAAGCAAGGTTTGTCCACTGCTGGCA
TGCCTCTCCTGAACCTCCCTCTCACGTATTCTCTCCTTGTGTTAATTTATTTACTCTAAATAATTATCTCGTCAGCTGTG
TTGCTATCAGTAGTATATTTACCTACCTACATATACACCCATACACGGCAGCAGAGATTTTTTCACTGTTGTTGCTGCAA
CTACTGAATCTGCAATGGCTAGGTCACCAGGGCTGAGGAGGTGGAGGGCCCTGCTTCTGCCTCTGTTTCTCATCTTCTTC
TTCTCAGGTACTCCTCCAGAATCAA-----------------TCTTCGTCTCCTCTC-----------------------
---------------------------
>chr2A_1
CGTCGCCGCCGACCGACGGCTCAATCCCGCCA-GCCTGCCCGCCGACGCCTCAGCCCCACTCCCAGCCGCCCCAATCACA
CGCCCCGCGCCGCCCCCGCCCCTCACGCGCGTCGCCGCCG--------CCGCCGCGGGCTCCGTTCTTCCTCGTCTGGAC
ACCGCGCTCCCGCCGCCTCCGCTCCGCCCCGCCCACCCATTG-----GGTTTCCAGGTACGAGGTTTCCCCATCTTCATC
CCGCGATTAAGTTCAATAGAAATCCCGCTGGACCTCACGGCCTGT-GGCACACGCCGTCTAGATCCGCCGCCCCTGCAGT
TGCTGTGAG-GTGA-GGAACGGCTTGTTATTAGCT-----ACATAGT----GGAGGAGTTTACCTCTGCATGTTTT----
ATCTGAGTCATGTGCTGAGCCATGTTCATCAGCTTTTGCATGTGCTTTGTTTAGCCTCGCGGTTTTCTTTTTA-ACTTTC
CCTGCCGA---TGCTTGAGTAG---GTAGTTGCGATTGGGGTGGTTGCTTGTTCT------CTTTGAAG--------CAA
TTTGTAGGTTTCTACTAATGGA-AATTTTGGCAGCTGCCCTTTCATCAAAAA-GGCTTGTTCGAGGAAATCCT--AAACT
GAACCCGCATGCCGGCCCCTGTTTCTG------GATGAAGCCATG-AAATTTTT----GGAGCCATATCCCTACCCTTAC
ATCCAGG----------------AAATAGATGAACAACCCTCCACTGCTGATAGTTAATACTTCCTCCGTCCCATAATAT
AAGAGCGTTTTTGACACTAGCGTTTTTTACAGGAGTACTCCCTCCGTTCCGAATTACTTGTCTTGGATTTGTCTAGATAC
AGATGTATCTAGACTCATTTTAGTGTCAGATACCTCCGTATCTAGACAAATCCAAGACAAGTAATTCAGAACGGAGGGAG
TAGTAGTTATCTTTGATGTTTGATAGTTTTATAAGTGTATAACCTGTAGATGCTCTTGCTGCAGAATGCTTCTTCATATT
CAGATGATACCCTT---AAGATGTTGTTTTTGTTGTGTGCCAGCTCTG-TTATAAATCTTTGTTGTTTGCCAGCTCTG-T
TTATAAC--------------------------------------------------------CTTTTGCAG---TGCTT
ATTCTTAATTAT--TCCGAGGAAATCTT----AGCCATT----TCAAGTGACTGCTTCTGCGTATTGTTATTTCCAGCAG
AAGTCGCGCTTCGCTCCTATGGCGGCATCTGACGAACAGCCTCAGAAGGACGAACATGATATGAAGGACGAACAACAGGC
TGAGAAGGACG---AAAAA---CAGGCTGAGAAGGAGTACGCTGATTTCGAGGCGAGGGTCAAGAGGACGATATACATCG
ACCACCTCTCCCCTCTGGTCACCAGCCAGGTTATCAAGGCGTCTCTCGCCCAGTGCGCCAACGTCGTCAACACGGAGTTC
ATCGAGAACTACACGATCCAGTACGAGATCCCCGCCGCTGCGTTGGTGGAGGTGGACAACGTGTCGCAGGCCCAGGCTGC
TGTGGACCTGATGAACAACTTCCCTTTCATGATCGGCGGGATGCCCAGGCCTGTGAGGGCTGTCTTTGCAAAGCCCGAGA
TGTTTCCGGACCGCCCTAGGAAGCCTGGCTTGAAGATTGAGTTCAGCTGGGTAAAGCAAGGAGATCCGGGGTATGATGGG
ATGAATAAGCTCAAGGGCCTTATGAGGAGGCAAGAAGCAGAAAATATGGCACTCATCAAGGTGAAGTGGTTGTTTCTTTA
CTTCGT--TA--CTGTTCTTATTATGTACTCACTCCGTCCCAAAATAAGTGTCTCAACTCTAGTATAACTTTGTACTAAA
GTTACTACAAAGTTGAGACACTTCTTTTGGGACGGAGGGAGTACTTGTATGCCCACTACTAAGAAAAGCTGCAAATCTTT
CTG-----CTTTACTTGTC---TAAAATGAGAAAAACACTTGCTCAGGGAACAGGAGATGTCAAGC------------AT
ATTTTGAGAATTTTGATGATGATGCTGCTCTTTAAAATGTGATACAGTTGCTTTAAACCTCATTTCTTCTGTATCCGAGC
CATAATTTCATTAAACTCTTTTCTTCTTTTTGTTTCAGAATCAATTGGAAGAGGAGAAGGAGCTGGCGGCGCAGCAGCAG
GAAACCCTGGGAGCAAGCAGCACCAAGTACGACATGCTCGAGAACCTCGTGAACAACGGGGAAATCACTAAACTCGCTCA
GCATTATAAGGTCAAGCTGGGAGAAGACTGATAGGTTCCTGACGTTCAAGCTCCTCCCTCGTAGACTGACTGCAGTCACC
AGTGCAAGCAGATTCTTGTTCTGCCCAGGGCATCCCCACTCACAGATGTGATGGTGTGATAGTGATAATCCATTGGCTAG
TTCTCATCTTGTGGTGTGATGATGGTAATAAAGCATTGATTTGTTTGGTGCCGCCATGCCCTAGTTGTGGCCAGCTGCAA
AGCAGCAGTTCCTTAGTGTAACAACAGTC-GATACATTACGACCGT-----TTGATGGTACGCTTGGTGTATTAATAATC
TTTGTATGACCTCCAAGC-TTAGCTTGTCAGCAAGATGATCCAATGATGTCTGATATTGTCTCCTGCATTGCTTCAAACT
TGCT---T---ATCTG---ATATGTCGGTGCCCGCGGTTCAGTCCTGTCTG-----------------------------
------------------------------------------------------GCAGTTCTGCTGCTAGCTTGAGTTGT
TTTATGTTGGTCCTGATGCCTGAAGGTGTGTTGTTGCCTGAAGCAGGAGGGAATCATGTCTCTGCCTTGTG----TTCCC
AGGAATGGACA-CAATGTCAGAGTCACAAGTGCCATGTTACCAAGTCTTGGAACACAGGAAAAGGAGGTTCTGCCTGGCT
GGCTGGAGAATCTGAGGAGGAAATGGCAAGAGGAAGCAAGGAAG----CCATGGCAAGCAAGGTTTGTCCCTTCCTGGCA
TGCCTCA-CTGAACCTCCCTCTCACGTATTCTCTCCTTGTGTTAATTTTTTTACTCTAAATAATTATCTCGTCAGCTGTG
TTGCTACCAGTAGTATATCTACCTACCTG--TATACACCCATACACATCACCAGAGG-TTTTTCACTGTTGTTGCTGCAC
---CTGAATCTGCAATGGGTAGGTCCCCAGGGCCGAGGAGGGGAAGTGCCCTGCTTCTGCCTCTGTTTCTCATCTGCTTC
TTCTCAGGTGCTACTCTTCACAATCAATTATTTTCCTCTGCTTCATCTTCTCCTCTTGCTTTCT----ACTATTGCTGGG
A-TGAGATTGTGTCAGGTTTGTGACT-
>chr6B_92
--------------------------------------------------------------------------------
------------CCCCCGCCCCGGCCCCGCATCCCACGCGCGTCGCCGCCGCCGCCGGCCCAGTCTTTCCTCGCCTGGAC
GCCGCGCTCCCGCCGTCTCCGCCCCGTCCG-----CCCACGCCCATTGGGTTCGAGGTACGAGGTTTCTCCGTCTTCGTC
CGGCGGTCAGGCTCGATTCAAATCCCGCTGAACCTCACGGCTTCCGGGCGCGCGCCGTCTAGATCCGCCATTGCAGCAGT
CGCTGTGACGACCTGGGAG--------------------TAGATTGCGAAGGCAGGATTTTGATTTTGCCTGTTTG----
GTCCGAGCGATGCGCCGAGCAATGTTCTTGAACTTCTGCATGGGCTTTGTTAGA------------CTTTTTA-ACTTTT
CCTGCCGA---TGCTTGAGTAGTTGCATCTGGCCTGGTG---GCTTGCTTGCTCT------GTTTGAGGTGGTGGTACAA
-TTGTAGGTTCCTACTAATGGA-AGTTTGGGCAACTGCCCTTTCATCAAAAG------------GGGAATCCT--AAACT
GAACCCGCATGCCGGCCCCTGTTTCTGTTTCTGGATGAAGCCTTG-AAATTCTGGGTGGGAGCCATATCCCTACCCTTAC
ACCCAGG------------AGATAGATAGATGAACAACCCTCCACTGCTGATAGTTG-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------T-TTTTATGTTTGATAGTTTTGTAAGTGTAAAGCCTGTGGACGCTTTTGCTACACAATGCTTGTTCTTGTT
CAGATGATGCCCTT---ACGACGTTGTTTTTCATGTTTGCCAGCTCTGTTTATAAATCTTTGATGTTTTCCACCTCTT-T
TTATAAATGCCTTTGATGCTTGGCAGCTCTGTTTGTTTATAAATGTAAAACCTGTAGATGCGTCTTGCACAG---TGCTT
ATGCTTAATTATATTCCGAGGAAATCAC----AGCCATTACAATCGAGTGACTGTTGCTAGGCGTTGTTATTTCCCGCAG
AAGGAA------GCTCCTATGGCGACATCCGACGAACAGGATCAGAAGGACCAACAGGATACCAAGGACGAACAACAGGC
TCACAAGGACG---ACGACGAGCAGGCTGAGAAGGAGTACGCCGATTTCGAGGCGAGGGTCAAGAGGACGATATACATCG
ACCACCTCTCCCCCCTGGTCACCGCCCAGGTCATCAAGGCGTCTCTCGCCCAGTGCGCCAACGTCGTCAGCACCGAGTTC
ATTCAGAACTACACGATCCAGTACGAGATCCCCGCCGCTGCGTTGGTGGAGGTGGACAACGAGTCGCAGGCCCAGGCCGC
TGTGGACCTGATGAACAACTTCCCGTTCATGCTCGGCGGGATGCCCAGGCCTGTGAGGGCTGTCTTTGCAAAGCCCGAGA
TGTTTCCGGACCGCCCTAGGAAGCCTGGGTTGAAGATTGAGTTCAGCTGGGTCAAGCAAGGAGATCCAGGGTATGATGGG
ATGAGTAAGCTCAAGGGCCTCGCAAGGAGGCAAGAAGCAGAAAATATGGCACTTATCAAGGTGAAGTGGTTGTTTCTTTA
CTTCTT--TA--CTCTTCTTATTATGT-----------------------------------------------------
------------------------------------------ACTTGTATGCCCAGTACTAAGAAAAGCTGCAAATCTTT
CTGCTTTCCTTTACTTGTC---TAAAATAAGAGAAACACTTGCTCAGGGAACAGGAAATATCAATC------------AT
ATTTTGAGAATTTTGATGATGATGCTGTTCTTTCAAATTCGATACAGTTGCTTTAAACCTCGTTTGTTTTGTATCCGAGC
CATAATTTCATCAAATTTTGTTCTCCATTTTGTTTCAGAATCAATTGGAAGAGGAGAAGGAGCTGGCGGCGCAGCAGCAG
GAAACCCTGGAAGCAAGCAATAGCAAGTACGACATACTCGAGAAACTCATGACCGACGGGGACATTACTAAACTCGCCCA
GCATTATAAGGTCAAGCTGGGAGACAACTGATGAGTTCTCGGCGTACAAGCACCTCCCTCGGAGACTACGGTCGGTCACC
AGTGCAAGCAGATCCTTGTTCTGCCGAGGGCATCC-CAGTCGTAGATGTGATGGTGCGATAGTAATCATCCATTGGCTAG
TCATCG-------------------------AGCGTCGATTTGTTAGGTGCAGCCGCGCTCTAGTTGTGGCCAGCTGCAA
AGCAGCAGTTCCTTAGTGTAACAACTGT------------GATCCGATCCGTTGATGGTACGCTTGGTGTGATAACAATC
TTTGTATGACTTCCAAG-CTTATCATGTCGGCAAGATGATCCAACGATGTCTGATACCATCTCCTGTATTGCTTGAAACT
TGCTCGAT---ATCGG---TTATGTCGGTGCCCTCGGTTCCGCCCTGTCTG-----------------------------
------------------------------------------------------GCAGTTGTGCTGCTAGCTTGAGATGT
TTTATGTTGGTCCTGA-------AGGTGTGTTGTTGCTTGGAGCAGGAGGGAATCATGTCTCTGCCTTGTGTTCCTTCCC
AGGAATGGGCA-CATTGTCACAGTCACAAGGGCCATCTTCCCATGTCTTGGAACACAGGAGAAGGAGGTTTTGCCTGGCT
GG----AGAATCTTAGGAAGAAATGCCATGGCAAGAGGAA----------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------CACCAGAGC-TTTTTCACTGCTGTTGCTGCAC
---CTGAATCTGCAAT-------------GGGCCAAGGAGGGGGAGTGCCCTGCTTCTGCCTCTGCTTCT----------
--------------------------------------------------------------------------------
---------------------------
>chr6D_118
--------------------------------------------------------------------------------
--------------------------------------CGTCG--GCGCCGCCGCCGGCCCTGTTCTTCCTCGCCTGGGC
GCCGCGCTGCCGCCGTCTCCACCCCGTCCG-----CCCACGCCCATTGGGTTCGAGGTACCAGGTTTCTCCATCTTCATC
CGGCGGTCAGGCTCAACACAAATCCCGCTGAACCTCACGGCTTCCGGGCGCGCGCCGTCTAGATCCGCCCTTACAGCAGC
CGCTGTGGCGACCTGGGAACGGCTTGCTA---GCTACTCTAGATTGCGAAGGCAAGATTTTATTTTTGCCTGCTTG----
GTCTGAGCGATGTGCCGAGCCATGTTCTTGAACTTTTGCATGGCT----------------------TTGTTA-ACTTTC
CCTGCCGATGCTGCTTGAGTAGTTGCGGCTGGCCTGGTG---GCT-GCTTGCTCT------GTTTGAGGTGGTGGTACAA
-TTCTAGGTTCCTATTAATGGA-GATTGGGGCAACTGCCCTTTCATCAAAAG------------GGAAATCCT--AAACT
GAACCCGCATGCCGGCCCCTGTTTCTGTTTCTGGATGAGGCCTTG-AAATTCTGGGTGGGAGCCATATCCCTACCCACAC
ACCCAGGAGATAGATAGATAGATAGATAGATGAACAACCCTCCACTGCTGATAGTTG-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------TCTTTTATGTTTGATAGTTTTATGAGTCTAAAACCTGTGGACGCCTTCGCTACACAATGCTTGTTCTTATT
CAGATGATGCCCGT---ACGATGTTGTTTTTCATGTTTGCCAGCTCTGTTTATACATCTTTGATGTTTGCCAGCTCTT-T
TTATAAATGCCTTTGATGCTTGCCAGCTCTGTTTGTTTATAAATGTAAAACCTGTAGATGCGTCTTGCACGGTGCTGCTT
ATTCTTAATTGT--TCGGAGGAAATCTCTCTCAGCCATC----ACGAGTGACTGTTGCTAGGCGTTGTTATTTCCTGCAG
GAGCTCCTATA------TATGGCGACATCCGACGAACAGGCTCGCGAGGACCGACAGGATATCAAGGACGAACAACTGGC
TCACAAGGACG---ACGAA---CAGGCTGAGAAGGAGTACGCCGATTTCGAGGCGAGGGTCAGGAGGACGATATACATCG
ATCACCTCTCCCCCCTGATCACCGCCCAGGTCATCAAGGCGTCTCTCGCCCAGTGCGCCAACGTCGTCAGCACCGAGTTC
ATTCAGAACTACACGATCCAGTACGAGATCCCCGCCGCTGCGTTGGTCGAGGTGGACAACGTGTCGCAGGCCCAGGCTGC
TGTGGACCTGATGAACAACTTCCCTTTCATGCTCGGCGGGATGCCCAGGCCTGTGAGGGCCGTCTTTGCAAAGCCCGACA
TGTTTCCGGATCGCCCTAGGAAGCCTGGCTTGAAGATTGAGTTCAGCTGGGTCAAGCAAGGAGATCCAGGGTATGATGGG
ATGAATAAGCTCAAGGGCCTCGCCAGGAGGCAAGAAGCAGAAAATATGGCACTTATCAAGGTGAAGTGGTTGTTTCTTTA
CTTCTT--TA--CTCTTCTTATTATGT-----------------------------------------------------
------------------------------------------ACTTGTATGCCCACTACTAAGAAAAGCTGCAAATCTTT
CTGCCTTCCTTTACTTGTC---TAAAATGAGAAAAACACTTGCTCAGGGAACAGGAAGTGTCAGACATATTTTGAGAAAT
ATTTTGAGAATTTTGATGATGATGCTGTTCTTTAAAATGTGATACAGTTGCTTTAAACCTCGTTTGTTTTGCATACGAGC
CATAATTTCATTAAACTTTGTTCTCCTTTTTGTTTCAGAATCAGTTGGAAGAGGAGAAGGAGCTGGCGGCGCAGCAGCAG
GAAACCCTGGAAGCAAGCAATAGCAAGTACGACATGCTCGAGAAACTCATGACTGACGGGGACATTACTAAACTCGCTCA
GCATTACAAGGTCAAGCTGGGAGACGACTGATGAGTTGTCGACGTACAAGCACCTCCCTCGGAGACTGCGA----TCACC
AGTGCAAGCAGATTCTTGTTCTGCCCAGGGCATCC-CACTCGTAGATGTGATGGTGTGATAGTAATCATCCATTGGCTAG
TC-------------------------ATAAAGCATCGATTTGTTTGGTGCCGCCGCGCTCTAGTTGTAGCCAGCTGCAA
AGCAGCAGTTCCTTAGTGTAACAACTGTCAGATACAATATGATCCGATCCGTTGATGGTACGCTTGGTGTAATATCAATC
TTTGTATGACCTTCAAG-CTTAGCATGTTGGCAAGATGATCCAACGATGTCTGGTACCATCTCTTGTATTGCTTGAAACT
TGCTTGAT---ATCGGATATTATGTCGGTGCCCTCGGTTCCGTCCTGTCTG-----------------------------
------------------------------------------------------GCAGTTGTGCTGCTAGCTTGAGATGT
TTTATGTTGGTCCTGA-------AGGCGGGTTGTTGCTTGGAGCAGGAGGGAATCATGTCT--GCCTTGTG----TTGCC
AGGAATGGACA-CAATGTCA--GTCACAAGTGCCATGTTCCCAAACCTTGCAACACAGGAGAAGGAGGTTCTGCC-----
----------------------------TGGCAAGAGGAA----------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------CACCAGAGC-TTTTTCACTGCTGTTGCTGCAC
---CTGAATCTGCAAT-------------GGGTAGGTAGGTCCCCAGGGCCAAGGAGG----------------------
--------------------------------------------------------------------------------
---------------------------
>chr6A_118
CGCG----------------------------------------------------------------------------
-------------------------------------------CGTCGCCGCCGCCGGCCCAGTTCTTCCCCGCCTGGAC
GCCGCGCTGCCGCCGTCTCCGCCGCGTC-----------CGCCCATTGGGTTCGAGGTACGAGGTTTCTCCATCTTCATC
CGGCGGTTAGGCTCAATACAAATCCCGCTGAACCCCACGGCTTCTGGGCGCACGCCGTCTAGATCCGCCCTGGCAGCAGC
CGCTGTGACGACCTGGGAACGGCTTGCTA---GCTA-----GATTGCGAAGGCAAGATTTTATTTTTGCCTGTTTGATTG
ATCTGAGTGATGTGCCCAGCAATGTTCATGAACTTTTGCATGGCT----------------------TTGTTAGACTTTC
CCTCTCGA---TGCTTGAGTAGTTGCAGCTGGCCTGGTG---GCT-GCTTGCTCT------GTTTGAGGTGGTGGTACAA
-TTCTAGGTTCCTATTAATGGA-GATTGGGGCAACTGCCCTTTCATCAAAAG------------GGAAATCCTTAAAACT
GAACCCGCATGCCGGCCCCTGTTTCTGTTTCTGGACGAAGCCTTG-AAATTCTG----GGAGCCATATCCCCACCCTTAC
ACCCAGG------------AGATAGATGGATGAACAACCCTCCACTGCTGATAGTTG-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------TCTTTTATGTTTGATAGTTTTGTAAGTGTAAAACCTGTAAATGCTTTGGCTACACAATGCTTGTTCTTATT
GAGATGATGCCCTT---GCCATGTTGTTTTTCATGTTTGCCAGCTCTGTTTATAAATCTTTGATGTTTGCCAGCTCTTGT
TTATAAATGCCATCGATGTTTGCCAGCCC----TGTTTATAAATGTAAAACCTGTATATGTGTCTTGCACAG---TGCTT
ATTCTTAATTAT--TAA----------------------------GAGTGACTGTTGCTTGGCGTTGTTATTTCCTGCAG
AAGGAA------GCTCCTATGGCGACACCCGACGAACAGGATCAGAAGGACCAACAGGATATGAAGGACGAACAACAGGC
TCAAAAGGACGATGACGAA---CAGGCTGCGAAGGAGTACGCTGATTTCGAGGCGAGGGTCAAGAGGACGATATACATCG
ATCACCTCTCCCCCCTGGTCACCGCCCAGGTCATCAAGGCGTCTCTCGCCCAGTGCGCCAACGTCGTCAGCACCGAGTTC
ATCCAGAACTACACGATCCAGTACGAGATCCCCGCCGCTGCGCTGGTGGAGGTGGACAACGTGTCGCAGGCCCAGGCTGC
TGTGGACCTGATGAACAACTTCCCTTTCATGCTCGGCGGGATGCCCAGGCCTGTGAGGGCTGTCTTTGCAAAGCCCGACA
TGTTTCCGGACCGCCCTAGGAAGCCTGGCTTGAAGATTGAGTTCAGCTGGGTAAAGCAAGGAGATCCAGGGTATGATGGG
ATGAATAAGCTCAAGGGCCTCGCCAGGAGGCAAGAAGCAGAAAATATGGCACTTATCAAGGTGAAGTGGTTGTTTCTTTA
CTTCTT--TA--CTCTTCTTATTATGT-----------------------------------------------------
------------------------------------------ACTTGTATGCCCACTACTAAGAAAAGCTGCAAATCTTT
CTTCTTTCCTTTACTTGTCTAATAAAATGAGAAAAACACTTGCTCAGGGAACAGGAAATGTCAGAC------------AT
ATTTTGAGAATTTTGATGATGATGCTGTTCTTTAAAATGTGATACAGTTGCTTTAAACCTCGTTTGTTTTGTATCCGAGC
CATAATTTCATTAAACTTTGTTCTCCTTTTTGTTTCAGAATCAATTGGAAGAGGAGAAGGAGCTGGCGGCGCAGCAGCAG
GAAACCCTGGAAGCAAGCAATAGCAAGTACGACATGCTCGAGAAACTCATGACCGGTGGGGACATTACTAAACTCGCTCA
GCATTATAAGGTCAAGCTGGGAGACGACTGATGAGTTCTCGACGTACAAGCACCTCCCTCGGAGACTACG----GTCACC
AGTGCAAGCAGATTCTTGTTCTGCCCAGGGCATCC-CGCTTGTAGATGTAATGGTGTGATAGTAATCACCCATTGGCT--
------------------------------AAGCATCGATTTGTTTGGTGCAGCCGCGCTCTAGTTGTAGCCAGCTGCAA
AGCAGCAGTTCCTTAGTGTAACAACTGTTACGG---------TCCGATCCGTTGATGGTACGCTTGGTGTAATAACAATC
TTTGTATGACCTCCAAG-CTTATCATGTCGCCAAGATGATCCAACGATGTCTGATACTGTCT------------------
----------------------------------------------------------------------GTCTCCTGTA
TTGCATGAAATTTGCATATACTGTG--------------------------------GTTCTGTGGCTAGCTTGAGATGT
TTTATGTTGGTCCTGA-------AGGTGTGTTGTTGCTTGGAGCAGGAGGGAATCATGTCTCTGCCTTGTGTTCCTTCCC
AGGAATGGACA-CATTGTC----------------------------TTAGAACACAGGAATAGAGGGTTCTGCCTGGCT
GG----AGAATCTGAGGAAGAAATGCCATGGCAAGAGGAA----------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------CACCAGAGC-TTTTTCACTGTTGCTGCTGCAC
---CTGAATCTGCAAT-------------GGGCCAAGGAGGGGGAGTGCCCTGCTTCTGCCTCTGCTTCT----------
-TCTCAGGTGCTCTTCACACGGAAAT---------------TTCTTCACCTCCTCTCACTTTCT----GCTGTTGCTAGG
AGTAATAATGTGTCAGGTTTTCTGACT
>SNPs
--------------S-------------------------S---------------------------------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S-----------------------------------------------------------------------------
-------S-S----------------------------------------------------------------------
-------------------------------------------------------------------S------------
------------------S-------------------------------------------------------------
------------------------------------S---------------S---------------------------
--------------------------S-----------------------------------------------------
-------------------------------------------------------------S------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S---------------------S------------S
-------------------------------S-------S---S------------------------------------
-S---------------------------------------------------------------------------S-S
------------------------------------------------------------S-------------------
-S----S-----------------------------------------------S-------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
----------------------------------------------------------S---------------------
--------------------------------------------------------------------------------
------SS--------------S------S--------------------------------------------------
--------------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
-S------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
--------------------------------------S-----------------------------------------
---------------------S----------------------------------------------------------
---------------------S--------------------------------S-------------------------
-------------S---------S---------------------------SS---------------------------
-------------------------------------------------S------------------------------
--------------------------------------------------------------------------------
--------SSS--------------------S------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S----------------------------------------------------------
--------------------------------------------SSSS--------------------------S---S-
-----------------------------------S-------------S--S----S--S---------SS-S------
---S------S--------------------------S------------------------------------------
------------------------------------------------------------------------S-------
-----------S---------------S-S----------------------------------SSSS---S--------
---------------------------
>forward_499
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------T
TTCCCTCCCGATGCTTGAC-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
>reverse_1663
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------CCTTTGCAAAGCCCGAGA
TG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
>forward_1261
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------TTTCGAGTGACTGCTGCTGT-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
>reverse_2982
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------GGTCACAAGTGCCATGTTCC---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
