>input_sequence_66704
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----------------------------------------CCCTCCCTTCCTCCGATCACTACGCTCTCCATTCCCTCTG
CTCCTTCTCAATTCCAAGCACTTAACGAGCCTCAAGCCAAGATGAACAGCGCGGCCGAGACGGACGCCGCCGGCGAGAAC
GGCAACCCCGCCGCCCCGGTGCTGGTGGTGGAGCGCGTGGTGACGGTGGAGTACCTTGAGCAGTCCATGTCGCGGGGCCT
CCTCGGCAAGTTCCCCGACTCCTCCGCCTACGACTTCGACTACTGCCAGAGCGGCATCTGGTCCCCGGTCAACAAGATCC
CCAGCGAGTCGCCGGCCTCCGGCTCCAGAGACTTCCTCATCGCCAAGCTGAAGCGCCGGGCGCGGGCCGGGAGCAGGCTC
AAGGACGCTGCCGGCGGAGGCGGCAGCAGGTCGAGGTGGCGGCGCCGGCGGCTGCGGCGGGACGGCTCTTTCCTCGACCT
CCACGAGACGGCGAGCAGGGCGAAGCTGGACTTATCGCCGCCGCTGCCATCGCCTGCCCCCACCAAGGTAGTTCCCTGCA
CATGAACCCCTCCAAGCTTAAGCTAGCTCTCCGAATCTGCCATTGG-GTTACGAGGTTTCTGTTGGCTTGGGTTCTTCAG
GAGGGGTGGAGGAGGGTGCTCACGGCGGCCATCAGGAAGTTCAAGGCGCGGCACCGCCGGTCCCGGCCGGCTCCCCTGCT
CCAGATGATGCTTCCAATGCTCTGAAGTCTGAATCCACCGACCGACCGATCGATCGATCGCGCCCGCGACTTCCTTGTTC
TTCTGATTGATTATT----GATGAGTTCGAGCGTATTGTACAACAGATTAGATCGTCAGATCGATTGTTTGTAAGTTGCC
TGTCATA-----TAACTATCACCAGTTAAGTTTCTCCAT-----------------------------------------
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>chr2B_1_TraesCS2B01G377700
CAGGAATTATTCCCTGATGAAACTTGGGAAGCACTTAAAACATTTGTCATTCATTGCCACCAACTTTTTTTGAATTTTTT
TAAACTTTACTATTCATGGTGGTATCGTAAGAGCTAAAACTCGGATGGGTACTTACCAACACTTTTGTCATGAATGCAAG
TGACATTGACATACGGTGATGTTTTTCTGAACATTTTTGTATCTTATTTTCATTTTTATGATTTAGTATGAATTAGTTAT
GAAGTTTACAAAGTGATGGTCAAAGAGTCAAAGGGAAAAAACACAAGACGACCAAAATGGGTTGGGCAAGATCACGTGCT
TACATAAACTAGGGGCAATCCTGTCAAGGGGGGCAAAACTAAGGGTATAAAAACAATTATCCCTTTCTTTGAATTTTTAC
TCGTGTCTTACAAACGCAGACTGTTTCGGTGCCTGCGAGTGAGCTGATCGAGATGAAACCTGACAAAGAAGAAAACATTC
ATGATTATGTGTTGATTATGCTAATGAAATGGAATTTTACGCTACAGTTGATAATTCATCCGGTTATACCATCGTATGAG
AGAGTGGTCGAAGCAACCGTGTCCTAAAGGTCGTGAGCCAGCCACCAAATGAGGAGGCAGCCACAACCCGAGACGGAGAT
GGACCCGGAGGTAAAAATGACATGAGTTGGATGGTCGCCGCGACGCCGACTAAGTCCACTATTATCAAGATCTTAGAGGA
CAAACATGACCAGCAGAAGACCGCAGGTTCACGCTACGGAGACCATTTGTGGACACATAATGCGCATATACAGGAAAACT
TCGCCCCAATCTCTCTTAAAAAAGAACATCGTCGTAAAAGAAAAACAAATGACAAGCTTTGACGTACACATCAGCTTTGG
TGCAGGCAGTTCCAGACCCCACTCATCAGTGCCACGAACCCTCGAGATCCCAACGGTCGAGTGCCCGCCCAGCCACCGCA
ACGGTTACTTCCACCGATCTGCTCCATTTCCCACCCCTTTCCCTCCCTTCCTCCGATCACTACGCTCTCCATTCCCTCTG
CTCCTTCTCAATTCCAAGCACTTAACGAGCCTCAAGCCAAGATGAACAGCGCGGCCGAGACGGACGCCGCCGGCGAGAAC
GGCAACCCCGCCGCCCCGGTGCTGGTGGTGGAGCGCGTGGTGACGGTGGAGTACCTTGAGCAGTCCATGTCGCGGGGCCT
CCTCGGCAAGTTCCCCGACTCCTCCGCCTACGACTTCGACTACTGCCAGAGCGGCATCTGGTCCCCGGTCAACAAGATCC
CCAGCGAGTCGCCGGCCTCCGGCTCCAGAGACTTCCTCATCGCCAAGCTGAAGCGCCGGGCGCGGGCCGGGAGCAGGCTC
AAGGACGCTGCCGGCGGAGGCGGCAGCAGGTCGAGGTGGCGGCGCCGGCGGCTGCGGCGGGACGGCTCTTTCCTCGACCT
CCACGAGACGGCGAGCAGGGCGAAGCTGGACTTATCGCCGCCGCTGCCATCGCCTGCCCCCACCAAGGTAGTTCCCTGCA
CATGAACCCCTCCAAGCTTAAGCTAGCTCTCCGAATCTGCCATTGG-GTTACGAGGTTTCTGTTGGCTTGGGTTCTTCAG
GAGGGGTGGAGGAGGGTGCTCACGGCGGCCATCAGGAAGTTCAAGGCGCGGCACCGCCGGTCCCGGCCGGCTCCCCTGCT
CCAGATGATGCTTCCAATGCTCTGAAGTCTGAATCCACCGACCGACCGATCGATCGATCGCGCCCGCGACTTCCTTGTTC
TTCTGATTGATTATT----GATGAGTTCGAGCGTATTGTACAACAGATTAGATCGTCAGATCGATTGTTTGTAAGTTGCC
TGTCATA-----TAACTATCACCAGTTAAGTTTCTCCATTCAGTTTGCGTCCTACTTTTCCGTCAGTTAGTTTCGGTTTG
CAACCCATCTGACACGGTTTCTGATGGAATCGTAACGAACCTGAATTC-GACTCGAAATCCACCCTGCAATTCCGTTATA
AATTCCCCGTGGGAATCGCAACTAAAACAAACGCGCCGGATCAGCAACAGCCGACAGATTCGACCTTCCAAGTTCGGCCA
GAACGCGAGAGAGTCCCGGAGCTCTCAAGATGGCTTCCAAGATCGCCGCCACGGCGGCGAAGGTGCCAGCGAAGACGAAG
GGCCAGTGCATCTGCTCGCCCACCGACCACCCTGGCTCCTTCCGGTGCCGGCTCCACCGCGCCAGCGGTATGCCCAGGTC
GATCTCGTGCCAGCAGTTCGGTGACCCCCACACGGCGAGCTCGCCGCTGGTCTCCTCCGGCCACATGCCAAGGTCGGCAT
CTCAGCAGCAGTTCACGGCTCCTTCCGGCTCCGGCATTTTGAGATCGGCGTCCCAACAGCAGCTCCCGCGCTCCCTCGGT
GTGCCAAGATCGGCATCGTGGCAAGATTCTGCTCACGAGAATTGAACAAACCTCCTGAACCAGGATGTTCTTTTTTCATA
GCTTAAGTTCAGAAACTACCGATGTAACT---TTTTTAAAGATTTTTTTTTCTTTTTTTGAAGCGCTAGATAGTTGTAAT
TAGCACTTTAGTCTTACGACGACACAAT--------------------------TTTAGAGACAATGGAATAAACTAATG
CTGAGATACACAGGAAAAATCTGGTAGAAGAACCTGAACAACAGGATGGTTCTTCTCTTTGCGGCTAACGGTGATGATTC
CCGACAGAAATAACTACAAGCTCTCGTCAAATACTCCACTACTTGAAAACTAGTGCTAGGAAGACTACATCTCATCTATC
TCACCCTCTCCACCA----CGACACTTAGCAATAGCAGCTGCCCCTGACAGTGTACTGCAGAGTTATCAATACACATCCA
CCATGCGCGCTTGCAAACGAATGAAGCTATGAT
>chr2A_808
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-------AATCTCTCTTAAAAAACACTTT-GTCGCAAAAGAAAAACAAATGACAAGCTTTGGCGTACACATCAGCTTTGG
TGCACGCAGTTCGAGACCCCACTCATCAGTGCCACGAACCCTCGAGATCCCAACGGTCGAGTGCCCGCCTAGACACCGCA
ACGGTTACTTCCACCGATCTGCTCCATTTCCCACCCCTTTCCCTCCCTTCCTCCGATCACCACGCTCTCCATTCCCTCTG
CTCCCTCTCAATTCCAAGCACTTGTCCAGCCTTAAGCCAAGATGAACAGCGCAGCAGAGACAGACGCCGGCGGCGACAAC
GGCAACCCGGGCGCCGCGGTGCTGGTGGTGGAGCGCGTGGTGACGGTGGAGTACCTGGAGCAGTCCATGTCGCGGGGCCT
CCTCGGCAAGTTCCCCGACTCCTCCGCCTACGACTTCGACTACTGCCAGAGCGGCATCTGGTCCCCGGTCAACAAGATCC
CCAGCGAGTCGCCGGCCTCCGGCTCCAGAGACTTCCTCATCGCCAAGCTGAAGCGCCGGGCGCGGGCCGGGAGCAGGCTC
AAGGACGCTGCCGTCGGAGGCGGCAGCAGGTCGAGGTGGCGGCGCCGGCGGCTGCGGCGGGACGGCTCTTTCCTCGACCT
CCACGACACCG---GCAGGGCGAAGCTGGACTTATCGCCGCCGCTGCCGTCGCCTGCCCCCACCAAGGTAGTTCCCTGCA
CATGAACCCCTCCAAGCTTAAGCTAGCTCCCCGAATCGGCC-TTGG-GTTACGAGGTTTCTGTTGGCTTGGGTTGTTCAG
GAGGGGTGGAGGAGGGTGCTCACGGCGGCCATCAGGAAGTTCAAGGCGCGCCACCGCCGCTCCCGGCCGGCTCCCCTGCT
CCAGATGATGCTGCCAATGCTCTGAAGTCTGAATCCG----CCGACCGATCGATCGATCGCGCCCGCGACTTC-TTGTTC
TTCTCTTTGATTATT----GGTGAGTTCGAGCGTGTTGTACAACAGATTAGATGGTCAGATCGATGGTTTGTAAGTTGCC
TGTCATGTACTGTAACTATCACCAGTTAAGTTTCTCCATTCAGTTTACGTCCTACTTTTCCGTCAGTTTGTTTCGGTTTG
CAACCCATCTGACACGGTTCCTGATGGAATCGTAACGAACCTGAACTCTGACACGAAATCCACCCTGCAATTCCGTTATA
ATCTCCCTGTGGGAATCGCAACAAAAACAAACGCGCCGGATCAACAACACCCGACAAAATCGAC-TTTCAAGTTCGGCCC
GAACCCA--AGAGTCCCGGAGCTCTGAAGATGGCTTCCAAGATCGCCGCCACGGCGGCGAAGGTGCCAGCGAAGGCGAAG
GGGCAGTGCATCTGCTCGCCCACCGACCATCCTGGCTCCTTCCGGTGCCGCCTCCACCGCGCCAGCGGTATGC--AGGTC
GGTCTCGTGCCAGCAGTTCGGCGACCCCCACACGGCGAGCTCCCCGCTGCTCTGCTCCGGCCACATGCCGAGGTCGGCAT
CGCAGCAGCAGTTCACGACTCCTTCCGGCTCCGGCATTTTGAGATCGGCGTCCCAGCAGCAGCTCCCGCGCACCGCAGGT
GTGCCAAGATCGGCATCGTGGCAAGATTTTGCTCAGAAGAACTGATCAAACCTCCTGAACCAGGCTGTTCTTTTTTCATA
GCTTAAGTTCAGAAACTACCTATGTAACT---TTTTTTTAGAA-TTTTTTCCCTTGTTTGAAGCGCTAGATAGTTGCAAC
TAGAGCTGCAATCTTAGGGCGATATAATTTTAGAGACAATAATGTTCAAAAAAATTTAGAGACAATGGGATAAACTAATG
CGGAGATACACAAAAAATTCTCATAAAAAGAACCTGAACAGCAGGATGGTTCTTTTCTTTGCAGCTAACAGTGGTGATTC
CCGACAGAAATAGCTACAAGCTCTCATCAAATACTCCACTACTGGAAAACTAGTGCTAGGAAGACTACATCTCATCTATC
TCACCCTCTCCACCA----AGACACTTAGCAATAGCAGCTGCCCCTGACAGTGTACTGCAGAGTTATCAAGACACATCCA
CCATGCGCTCTTGCAAAGGAATGAAGCTGTGAT
>chr2D_817
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----------------TAAAAAAAAAC-TCGTCGCAAAAGAAAAACAAATGACAAGCTTTGACGTACACATCAGCTTTGG
TGCAGGCAGTTCCCGACCCCACTCATCAGTGCCACGAACCCTCGAGATCCCAACGGTCGGGTGCCCGGCCAGACACCGCA
ACGGTTACTTCCACCGATCTGCTCCATTTCCCACCCCTTTCCCTCCCTTCCTCCGATCACCACGCTCCCCCTTCCCTCTG
CTCCTTCTCAATTCCAAGCACTTCACGAGCCTTAAGCCAAGATGAACAGCGCGGCCGAGACGGACGCCGGCGGCTACAAC
GGCAGCCCGGCCGCCCCGGTGCTGGTGGTGGAGCGCGTGGTGACGGTGGAGTACCTTGAGCAGTCCATGTCGCGGGGCCT
CCTCGGCAAGTTCCCCGACTCCTCCGCCTACGACTTCGACTACTGCCAGAGCGGCATCTGGTCCCCGGTCAACAAGATCC
CGAGCGAGTCGCCGGCCTCCGGCTCCAGAGACTTCCTCATCGCCAAGCTGAAGCGCCGGGCGAGGGCCGGGAGCAGGCTC
AAGGACGCTGCCGGCGGAGGCGGCAGCAGGTCGAGGTGGCGGCGCCGGCGGCTGCGGCGGGACGGCTCTTTCCTCGACCT
CCACGACACCG---GCAGGGCGAAGCTGGACTTGTCGCCGCCGCTGCCATCGCCTGCCCCCACCAAGGTAGCTCCCTGCA
CATGAACCCCTCAAAGCTTGAGCTCGCTCCCCGAATCTGCCATTAGCGTTACGAGGTTTCTGTTGGCTTGGGTTCTTCAG
GAGGGGTGGAGGAGGGTGCTCACGGCGGCCATCAGGAAGTTCAAGGCGCGGCACCGCCGGTCCCGGCCGGCTCCCCTGCT
CCAGATGATGCTTCCAATGCTCTG--------ATCCG----TCGACCGATCGATCGATCGCGCCCGCGACTTCCTTGTTC
TTCTGTTTGATTATTGATCGATGAGTTCGAGCGTATTGTACAACAGATTAGATCGTCAGATCGATGGTTTGTAAGTTGTC
TGTCA-----TGTAACTATCACCAGTTAAGTTTCTCCATTCAGTTTGCGTCCTACTTCTCCGTCAGTTTGTTTCGGTTTG
CAACCCATCTGACACGGTTTCTGATGGAATCGTAACGAACCTGAATTC-GACTCAAAATCCACCCTGCAACTCCGTTATA
AATTCACCGTGGGAATCGCAACTAAAACAAACGCGTCGTATCAACAACAGCCGACAGATTCGACCTTCCAAGTTCGGCCG
GAACGCGAGAGAGACCCGGAGCTCTGAAGATGGCTTCCAAGATCGCCGCCACGGCGGCCAAGGTGCCAGCGAAGGCGAAG
GGGCAGTGCATCTGCTCGCCCACCGACCATCCTGGCTCCTTCCGGTGCCGGCTCCACCGCGCCAGCGGTATGCCGAGGTC
GGTCTCGTGCCAGCAGTTCGGTGACCCCCACACGGCGAGCTCCCCGATGCTCTGCTCCGCCCACATGCCGAGGTCGGCAT
CGCAGCAGCAGTTCACGCCTCCTTCCGGCTCCGGCATTTCGAGATCGGCGTCCCAGCAGCAGCTCCCGCGCTCCGCCGGT
GTGCCAAGATCGGTATCGTGGCAAGATTTTGCTCACAAGAACTGATCAAACCTCCTGAACCAGGCTGTTCTTTTTCATAG
CTT--AGTTCAGAAACTACCGATGTAACTCCGTTTTCTAAGATTTTTTTTTCATTTTTTAAG------GATAGTTGTAAC
TAGCACTGTAATCTTACGACCACACAAT--------------------------TTTAGAGACAATGGAATAAACTAATG
CTGAGATACACAGGAAAAATCTCGTAGAAGAACCTGAACAACAGGATGGTTCTTTTCTTTGCGGCTAACGGTGATGATTC
CCGACAGAAATAACTACAAGCTCTCATCAAATACTCCACTACTGGAAAACTAGTGCTAGGAAGACTACATCTCATCTATC
TCACCCTCTCCACCAAGAAAGACACTTAGCAATAGCAGCTGCCCCTAACAGTGTACTGCAGAGTTATCAATACACATCCA
CCATGCGCGCTTGCAAACGAATGAAGCTGTGAT
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSS----------------S---S------S---------------------------------------------
------------------------------------------------------------------------S-------
------------------------------------------------------------S-------------------
-----------------------S--------S------------------------------------S------S---
--------S-----------------------------------------------------------------------
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------S--S-SSS------------------------------------------------------------------
-----------------------------S--------------------------------------------------
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------------------------------------SSSSS---------------------------------------
-----S-----------------------------------------------------------S--------------
------S-------------------------------------------------------------S-----------
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-------------------------------------------S-----------------------------------S
-------------------------S------------------------------------------------S-----
--S--------------------------S--------------------------------------------S-----
-S----------------------------------------S------S---S---------------S----------
-S---------------S-------------------------------------S------------------SS----
----------------------------S-------S----S---S------------------S---------------
-------------------------------------S--------------S--------------------------S
-------S--S---------------------------------------------------------------------
----------------------S-------------------------------S-------------------------
-------------------------S-----------------S------------------------------------
-------------------S------------------------------------------------------------
----------------------------S----
>forward_743
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---ACATGACCAGCAGAAGACCG---------------------------------------------------------
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>reverse_1550
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-----------------------------TCCGAATCTGCCATTGGGTT-------------------------------
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>forward_766
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--------------------------GTTCACGCTACGGAGACCAT----------------------------------
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>reverse_2695
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------------------------------------------------------CTCTTTGCGGCTAACGGTGA------
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