>input_sequence_66684
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-----------ATGGGCAACTGCCAGGCGGCCGAGGCGGCGGAGGTCATCGTCCAGCACCCCGGCGGCAAGGTGGAGCGC
CTCTACTGGCCCACCCCCGCCGCCGAGGTCATGAAGACCAACCCCGGCCACTACGTCGCGCTCGTCATCCTCCGCCTCTC
CCCCGACGACAAGGCGGCCGCGGGGGACGAGGCCGCGGCGGCGGCCGCCGTCGCAGGCGCCGGCGCCGCAGCGAAGATCA
CCCGGGTCAAGCTCCTCAAGCCCAAGGACGTGCTCCACCTCGGCCAGGTCTACCGCCTCATCACCGCGCAAGGTTCGTGC
ACAGTCCTCCACTCCTC-------CCTGCGCCCGTCGACATCGGAGAGAGAGCCGCCGCGCTCTCCTTCCTCGTTGTCCA
TGGAAGC-AGCT---AGTTCCT--------GTGCCAGGATTCCGTCGTCCGTTGCAGCAATCTA-----GTTCTAATCGA
TGCTTGATGGTGTTGCGGTGCTCAGAGGTGACCAAGGCGCTGCGGGCGAGGAAGAACGACAAGATGCGGCGGTGCGAGGC
CATCAAGCAGCAGCACGACCAGCTCCGGCGCGGCGACGGGGCGGAGCAGGGCGCCTCTGACAAGGTCAGTGCCTCCCCAT
TCTCCTGGTGATAATCTCCTCTTCCTATCTGAAACTGCACGAAGCCGTATACTGATTCCTATACGCGCTCCTGCCTCCTC
AGGACGCGAACGCGAACGCGAAGCAGCGGGGGGAGAAGGACCGGCACCGGGGCTCCGGCGGCGCGCAGCCGGCCGGTGGC
GGCAGGGGCCGGCACTGGCGGCCGTCCCTGCAGAGCATCTCCGAAGCCGCGGCGGGCCAGAGCAGCAGCACCAGCAGCAG
CATCTCTGAATCCACTGCGAGCTAA-------------------------------------------------------
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-------------------------------------------------------
>chr5D_1_TraesCS5D01G205700
GAAGCCATTCGGTCTCCGGCAGGCAAACAGTTTGTTAGTAGGAGTAGCTTTCTATGGACTACTGTT------TGATGTCG
TTTGCATGCCGCTTTTGCCCGCAGGTTCGGTGGCGAAAATGGAATAGTAACATACACT----------------TAATTT
TTATTTCCAGTTCTTTTTATGGAGGTTTTTTTTAACATCAGTACACACAAGCCCTCATATATACGTGTATACATTCATCC
TTATGAACGCACACACGCACACCCTATCTATATATACATCTCCGAAAGACTGAATGAGCCGGCATATCATCTCTTCCGAG
AGACTGAATGAGCCGGCGATCATCTTGAGATTTTACGAAGTCACCGTAGACACCTCGTAGTCGATGGAAACGTCTCCTCC
CACTAAACGCGTGTCTTCGGAAATCCTGAAAAATAAAGCGAGCATCAGAAGTTGAACCCTGATGGGCTGGGATACAACTC
TTCACCTAACCATTCAACTACAGGTTGGTTCGCAGTTCCTCCTATGAAAATTAGTGTGTTCAATCAGCTAGTATTCGTAC
C-ACTATGGTGCATGCTCTCGGACGG------------------TTTTTCAGAGGGAGATGTCGAGTTAAAGCGAGGGGC
AACTCTATGGATAGGATAA-------------------------------------------------------------
-----TACAAAGAATTTCGC------------------------------------------------------------
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-------------------------------------------------------------------------CATCAAG
CGTACTGCACCTGAAATTTTGACAAATTCATAAGAGTATTTTTTACAGTTTTTTTATGTTCAAAACTAGGTTAAAGCAGT
GGTGCTCGGTGCTTCACCATT-------TGGCCATTTTGCAGTGTGCTGACTGCCGAGACGAGAGACGAGGCGAA-----
GCCAGCCAAAACTGCCCTCCCCTC------ATGGCCGACGCCTTTTCTTCCCTTCACCACATTTAACGCCACCACCTCCC
TCGA----------------------------------------------------------------------------
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-------------------------------AACGGCAACTGCGTGACCTCCTGCTCTCCTCTCCTCTC--CTCTGCTCC
TCCACCACCACCACCTCCCT----CTCCCCCAGAGCTCACCAGACGCCACTAGCTCCGCCGGCAGAAGCGAGGCGCGGAG
GCGCGCGCGCGATGGGCAACTGCCAGGCGGCCGAGGCGGCGGAGGTCATCGTCCAGCACCCCGGCGGCAAGGTGGAGCGC
CTCTACTGGCCCACCCCCGCCGCCGAGGTCATGAAGACCAACCCCGGCCACTACGTCGCGCTCGTCATCCTCCGCCTCTC
CCCCGACGACAAGGCGGCCGCGGGGGACGAGGCCGCGGCGGCGGCCGCCGTCGCAGGCGCCGGCGCCGCAGCGAAGATCA
CCCGGGTCAAGCTCCTCAAGCCCAAGGACGTGCTCCACCTCGGCCAGGTCTACCGCCTCATCACCGCGCAAGGTTCGTGC
ACAGTCCTCCACTCCTC-------CCTGCGCCCGTCGACATCGGAGAGAGAGCCGCCGCGCTCTCCTTCCTCGTTGTCCA
TGGAAGC-AGCT---AGTTCCT--------GTGCCAGGATTCCGTCGTCCGTTGCAGCAATCTA-----GTTCTAATCGA
TGCTTGATGGTGTTGCGGTGCTCAGAGGTGACCAAGGCGCTGCGGGCGAGGAAGAACGACAAGATGCGGCGGTGCGAGGC
CATCAAGCAGCAGCACGACCAGCTCCGGCGCGGCGACGGGGCGGAGCAGGGCGCCTCTGACAAGGTCAGTGCCTCCCCAT
TCTCCTGGTGATAATCTCCTCTTCCTATCTGAAACTGCACGAAGCCGTATACTGATTCCTATACGCGCTCCTGCCTCCTC
AGGACGCGAACGCGAACGCGAAGCAGCGGGGGGAGAAGGACCGGCACCGGGGCTCCGGCGGCGCGCAGCCGGCCGGTGGC
GGCAGGGGCCGGCACTGGCGGCCGTCCCTGCAGAGCATCTCCGAAGCCGCGGCGGGCCAGAGCAGCAGCACCAGCAGCAG
CATCTCTGAATCCACTGCGAGCTAATCGCCGGATTAACAATCCGCTTTTCTTCTCCTTTCTTTTGTTTTTCTTAGTAGTA
TAAAAGTGCTTGGAGGTGGGACCTACCAGA-----AGAAAAAACCTGTAAAAATCAGAGTACCAGAGCAGCAGCAGCAGC
AGCAATAGGAACGAAGCTTGTTTCATCTCTCGTGTACTGTAGTAATTATTGCCGTGGTGAAACTGTGAGTGCTTTCGATG
GAGTGGCCATAAAAGTGCAACTTGGCAATCTCAAAGCCCCGTTTGG--------AACGCCTGAATTTCCCCCGAATTCAT
GCAACCTCGCAATCTCGATGCTGCCTTTGGTCCA----------------------------------------------
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-------------------------------------------------------------------CGGC---------
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-ATTGCAAGTGTTTTTTTGAGAGTACGGCCTACTATATTTTAATAGAAGACAGAAATCAATCAAGTAAGAACTCTACACC
CATCGTGACAATTACAACCACGAC------------------------------------------------------GC
GGCATTGCAAGTTTTACATGAGCAGAAAGGAAGCGTACAGAT-----------AAAATGCTGTTTGCTTTACCATGCACG
GCACGTCGCTTGCAAAAATCACCAGATTCCCATGTGTTTCGGCAATCTGCTGCTGGAATCAAACCGTACCACTAGTAGTC
ACTGATAGCGACAATGCTACATTGATCAACTGCAAGATCGAGGCTCCAGATGAA-CTCAAGCCCATTTTGAATTTTCAGG
AAGGTTGCGCAGTGTCAGGTGCCGGGGCCGGGCACATGCGTTTCCATATGCT------------AACTCGGCAGCCGAGG
ACAACAGCGGCACCACTGCTGGTGATTCTGCACTGTTTAGTTTATCTGCTACATATGCTAACCATAACTAAGCTCGGC--
--------CAGTGACAGTCGTCCAGTCCACTTGGATAGAGCCCAGGGTCAGGGCGATGCCGTTGCCACTTGCCATGCCGG
ACAGGCGCCGCCCAACGATGCCCGCCAG------TCGAGCTCCAGCGGGGCTCCCGTCGGGCAGAGGCCACCGCCGCACG
TGTGGCTCCGCGCATCGGCGCTGCTCCGGCCGCCCACCGCTCGGGATCCGGTCTC
>chr5A_1
GAAGCCATTGGGTCTCTGGCAGGCAAACAGTTTGTTAGTAGGAGTAGCTTTTTGTAGACTACTGTGTGTGTGTGATGTCG
TTTGCATGCCGCTTTTACCCGCACGTTCGGTAGCCAAAATGGCATACCAGTATTATATATAAACAAACAATTAGTAATTG
TTA-----------------------------------------------------------------------------
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----------------------------TTTCCAGTCTCTTCTACGGAGGTTATCGCGTGCAATCAGCTAGTATTTGTAC
C-CCTGTGGTACGTGCTCTCTGCACATTGGACACGGCCAGTATTTTTTTCATGGGGAAAAGTCAAGTCAAAGTGAGGG-C
AAACCTAAGGATAGTATAA-------------------------------------------------------------
-----GGAAAACGCTTTCCTTCAGCCGACTGATGCACGCGCAGAGTCCGTCTCCTGCGTAGCTATCAAATCGATTTTGAT
CAAGTGCTCAGGCAATTACGCTGGCCACCAGTCCGTGCATGTAGGGTTTCTTTTGCAACTGTTTCAGAAGGTTTCTACAG
CAGAGGTTTTATTTTCAGAAAATAAAACAGATGTGTGTTGAAGTTTTTTCGGCAACATGATCTAGTTTTAGAAAATTTCT
GCAATAGAGGTCTTGTTTCAAAAAGAAAAGAAAAATGGATCGGCAGTGAAGATTTTTCTTTTGCAACAAGGCTCTTGTTT
CAAAAGCATATCCCAGGTTGCAGAAAGCGTCGGAGAAGTGCCCGGTGTTAGAGCATACGAGGTGATGCATTGCAAGACGG
TGCATGTTTCAGAAACATAGATTCAGTTGCAGAAACCGCAAGAGGAGTGCCCGGTGTGAGAGCTCATCGTCGTCGTGCTG
AAGTAGAGGCAGTTGCTCGGGATGCTGGGTCAGAGGAGGTGCAGCAACTCTGGCGGCCGGCGGCGCTCCATGGCTGAGGC
GCTCAGGCCATGTCGGGGCAGCGCTACTGTCTCGGTGAACCTTTGCCACAAGGTCCTTGTTGCGAAGCCCCTAAGTGCAA
CAAGCTAGCTGTTGCGAAGGTCCTCGGTTGGCTGGGAGGGTGAATCGGATGGCTGTTTTGGGTGGCATCAGACGGCTGCC
GAGGCGGTTGATCTAATCGATTTATCACCCGACGGATGTGCAGTGCCCAGAGTATAATACACAAAAAATATTTCATGGAA
CGCACTACCCCTCAAATTTTGAAAAAAATTCAGTTTT-----------TTTTTAAATGTTCAAAACTAGGTCTGTGCAGT
GGTGCTCT-------ACCATT-------TGGCCATTTTGCAGTGTGCTGA-------GACGAGAGCCGAGACGAA-----
GGCAGCCAAAACTGCCCTCCTCTCCTCCTCATGGCCGGCGCCTT---TTCCCTTCACCACATTTAACGCCACCACCTCCC
TCGA----------------------------------------------------------------------------
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-------------------------------AACGGCAACTGCGTGACCTTCTGCCCTCCTCTCCTCTCTGCTCTGCTCC
TCCACCACCACCTCCCTC------CTCCCCCAGAGCTCACCAGACGCCACTAGCTCCGCCGGCAGAAGCGAGGCGCGGGG
GCGCGCGCGCGATGGGCAACTGCCAGGCGGCCGAGGCGGCGGAGGTCATCATCCAGCACCCCGGCGGCAAGGTGGAGCGC
CTCTACTGGCCCACCCCGGCCGCCGAGGTCATGAAGACCAACCCCGGCCACTACGTCGCGCTCGTCATCCTCCGCCTCTC
CCCCGACGACAAGGCGGCCGCGGGGGACGAGGCCGCGGCGGCGGCCGCCGTCGCAGGCGCCGGCGCCGCAGCGAAGATCA
CCCGGGTCAAGCTCCTCAAGCCCAAGGACGTGCTCCACCTCGGCCAGGTCTACCGCCTCATCACCGCGCAAGGTTCGTCT
ACAGTCCTCCACTCCTC-------ACTGCGTCCATCGACATCG-----ATAGCCGCCGCGCTCGCCTTCCTTGTCGTCCA
TGGCGTGGAGCAGCGCGTTTCT--------GCGCCTGGATTCCGCCGTTCGTTGCAGCAATCTACTGTAGTTCTAATCGA
TGCTCGTTGGTGTCGCGCTGCGCAGAGGTGACCAAGGCGCTGCGGGCGAGGAAGGACGACAAGATGCGGCGGTGCGAGGC
CATCAAGCAGCAGCACGACCAGCTCCGGCGCGGCGACGGGGCGGAGCAGGGCGCCTCGGACAAGGTCAGTGCCTCCCCAT
TCTCCTGGTGATAATCTCCTCTTCCTATCTGAAACTGCACGAAGCAGTATACTGATTCCTATACGCGCTCCTGCCTCCTC
AGGACGCGAACGCGAACGCGAAGCAGCGGGTGGAGAAGGACCGGCACCGGGGCTCCGGCGGCGCGCAGCCGGCCGGTGGC
GGCAGAGGCCGGCACTGGCGGCCGTCCCTGCAGAGCATCTCCGAAGCCGCGGCGGGGCAGAGCAGCAG---------TAG
CATCTCTGAATCCACTGCGAGCTAATCGCCGGATTAACAATCCGCTTTTCTTCTCCTTTCTTTTGTTTTTCTTAGTAGTA
TAAAAGTGCTTGGAGTTGGGACCTACCAGACCAGAAGAAAAAACCTGTAAAAATCAGAGTACCAGAGCAGCAGCA---GC
AGCAATAGGAACGAAGCTTGTTTCATCTCTCGTGTACTGTAGTAATTATTGCCGTGGTGAAACTGTGAGTGCTTTCGATG
GAGTGGCT-------TGCAACCTCGCAATCTCAAAGCCTCTTTTGAATTGATGAAACACCCGAATTTCCCCCAAATTCTC
GCGACTTAGGTTAGTAAATCTAATTAATAATAAGAGCATAAAGACTTTCATTCTAGAATTTTTTCAAAAATCCAAAAAGC
CTTTTCTATTTATCCA--------------------------------------------------TTTTAATTTCATCA
TTAAATAGAAACCCTTCTGGG-TTTTTTTCATTCTATCGAAAGAATTTTCAAAAATCAAATGAGGAATTAATTAGAAAAA
AATTAGTTCTATAATTGCAAGTTAGAAAAAATAAGTCC-AACTCTTCCAAGTAGCGTTTCTATTGGGCAGC---------
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-AAAGCAAGAGTTTATTGTAAAAAAGAGTTGAAAACGACACAAG-CAGACGAAGTCTATTTTAATGAATACTCTAACGTT
CCTAAATTTTATGGGCTTTCCCAAAATCCACGATTCCCGGCAAT----------------AATTTCGCCTGTTTGTATGC
GGCATTGCGAGTTGTACATGAGCGGAAAGGAAGCGTACTGCAAAAAAAAAAAAAAAACGCTGTTTGTTTTACCATGCACG
GCACGTCGCTTGCAAAAATCAGCAGATTTCCGTGTGTTTCGGCAATCTGCTGCTGGAATCAAACCGTACCGCTAGTAGTC
ACTGATGGCGACAATGCTGCATTGATCAACCGCAAGATCGAGGCTCCAGATGAA-CTCGAGCCCGTTTTGAATTTTCAGG
AAGATA-------------------------GCACATGCGTTTCCAGTGTTCCAGAGCGTAAAAAACTCGGGAGCCGAGG
ACAACAGCGGCACCACTGCTGGTGATTCTGCACTGTTTAGTTTATCTGCTACATATGCTAACTATAA----------C--
--------CAGTGACAGTCGTCCAGTCCACTTGGATAGAGCTGAGGGTCAGGGCGATGCCGTTGCCACTTGCCAGGCCGG
ACAGGCGCCGCCCAACGATGCCCGCCAGCGCCAGTCGAGCTCCAGCGGGGCTCCCGTCGGGCAGAGGCCACCGCCGCACG
TGTGGCTCCGCGCATCGGCGCTGCTCCGGCCGCCCACCGCTCGGGATCCGGTCTC
>chr5B_11
----------GGTCTCTGGCAGGCAAACAGTTTGTTAGTAGGAGTACCTTTTTGTAGACTACTGTG------TGATGTCG
TTTGCAGGGCGCCTTTACCCTTACCTTCGGTGGCGAGAATGG--------------------------------------
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----------------TTTTGACAAATTCATAATAGAAATTTTGCAG--TTTTTTATGTTCCAAAAGAAGACCAGTTTAG
TGCAGTAGTG--CTCCACGTGTCCACCATTGCCCATTTGCAGTGTGCTGA-------GACGAGA-------CTAGATGGG
GCCAGCCAAAACTCCCCTCCCCTC------ATGGCCGGCGCCTT---TTCCCTTCACCACATTTAACGCCACCACTTCCC
TCGA----------------------------------------------------------------------------
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-------------------------------AACGGCAACTGCGTGACCTCCTGCTCTCCTCTC--CTC--TGCTCCTCC
TCCACCACCACCTCCCTCTCCCTCCTCCCCCAGAGCTCACCAGACGCCACTAGCTCCGCCGGCACAAGCGAGGT------
--------GCGATGGGCAACTGCCAGGCGGCCGAGGCGGCGGAGGTCATCATACAGCACCCCGGCGGCAAGGTGGAGCGC
CTCTACTGGCCCACCCCGGCCGCCGAGGTCATGAAGACCAACCCCGGCCACTACGTCGCGCTCGTCATCCTCCGCCTCTC
CCCCGACGACAAGGCGGCCGCGGGGGACGAGGCAGCCGCGGCGGCCGCCGTCGCAGGCGCGGGCGCCGCCGCCAAGATCA
CCCGGGTCAAGCTCCTCAAGCCCAAGGACGTGCTTCACCTCGGCCAGGTCTACCGCCTCATCACCGCGCAAGGTTCGTGT
ACTGTCCTCCACTCTCCCTGCGTGACTGCGTCCGTCGACATCG-----AGAGCCGCCGTGCTCTTCTTCCGTGTCATCCA
TGGCGCGGAGCT---CGTTCCT--------GTGCCTGGATTCCGCCGTTCGTTGCAGCAATCTGT-----TTCTAATCGA
TGCTTGTTGGTGTTGCGGTGCGCAGAGGTGACCAAGGCGCTGCGGGCGAGGAAGAACGACAAGATGCGGCGGTGCGAGGC
CATCAAGCAGCAGCACGACCAGCTCCGGCGCGGCGACGGGGCGGAGCAGGGCGCCTCTGACAAGGTCAGTGCCTCTCCAT
TCTCCTGATGATAATCTCCTCTTCCTATCTGAAACCGCACGAAGCAGTATACTGATTCCTATACGCGCTCCTGCCTCCTC
AGGACGCGAACGCGAACGCGAAGCAGCGGGGGGAGAAGGACCGGCACCGGGGCTCCGGCGGCGCGCAGCCGGCCGGGAGC
GGCAGGGGCCGGCACTGGCGCCCGTCCCTGCAGAGCATCTCCGAAGCCGCGGCGGGCCAGAGCAGCAGCGCCAGCAGTAG
CATCTCTGAATCCACTGCGAGCTAATCGACGGATTAACAGTCCGCTTTTCTTCTCCTTTCTTTTGTTTTTCTTAGTAGTA
TAAAAGTGCTTGGAGTTGGGACCTACCAGACCAGAAGAAAAAACCTGTAAAAATCAGAGTACCAGAGCAGCAGCA---GC
A---ATAGGAACGAAGCTTGTTTCATCTCTCGTGTACTGTAGTAATTATTGCCGTGGTGAAACTGTGAGTGCTTTCGATG
GAGTGGCT-------TGCAACCTCGTAATCTCAAAGCCTCTTTTGAATT--TGAAACGCCCGAATTTCCGCCAAACTCCC
GCGACTTAGGTTAGTAAATCTTATTAATAAGAGCATA--AAAGACTTTCATTCTAGACACTTCTCAAAAATCCAATTTCA
TCTTGCCTGGGTGCTGTGCCCGTTTTTAATAAAAATGGGGAGGGTGAAAACCCCTTTTGATCATTTTTTTAATTTCGTCA
TTAAATAGAAACCCTTTTGGATTTTTTTTCATTGTATTGAAAGAATTTTCAAAAATCAAATGAGAAATTAATCAGAAAAA
GGTTAGTTCTATAATTG-AAGTTAGAGAAAATAAGTTCAAACTCTTTCAAGCAGTGTTTCTATCTGGCATGGGCGCTGCC
TCCTAGCGGCGGATCTGGTTACTCCCAGATTGGATCGGGGATTGAGGCTTTGGAGATGGGATTGGCCGGTGGCCCTGCGG
GATGGCGGTGGTGGTGCATCTGGTGACCAGGCTCCGCCGGTTATCTCGAGGCCTCTGGGTGGAGGTGCCGGCGGCAGCGT
GTGCTCAGCCTGGTGGTGGCGGCGGCCGTGCACGGGAGTTGAATTCCTTCGAACAGAGCTGGGTGAAAACTTGCTTTCGG
CTACAGCCAAGGCCGGCGGTGACGACGCTATCTGCATCGTTCCCTTCTTGAAGGCATCGCCATGGAGAAGTTCAAGGCCA
CTCTCTGCTACCTTCGGAGGAAACCCTAGATTGGATGACAGCGGCCCTCTGGTGTCGTTCCTCCCTTGGGGGCGTCATTC
TTGGAGGTACACACGTGATCGAGGGACCAGAGAATGGATTCTTTGGTGGAGCGATGCGTCGTCTCACTCATTGATGGCGG
CGGGTCTCGGCGGCATGGCGCTGTGGTGACTCGGCGTTCGATGCGCGGAGATGGACTCGCGCAGGAGGGTGACGCAGTTT
GGCGTCACGGTGGCGTCGACGGCAGTTAGAACGGGCAAAGTAGATGCAGCAGTACATCTTCGAAGATGGATTGGTGGCAG
GTGGCTGCGGCGGCCTCATACCCGGCAGGCGTCCTAGTTGAGGAGTGCGCCGGACCGGTGGGTGACCCATACCCGGCAGG
CGTCCTGCATGGGACCTCAGGTCTTAGATGTTAGGTTTGGCTGCGAGGTCTGTTTGGTATTAGGCCTAGACTATCAGCAT
CCCTTCATCAATTGGATAGGAGTAGCGACAAATGTTGCCTAGACGGTGGCTTTAGTCTTACTGTTGTATCACTTTGTGAG
ATTTTGTGTGAATAATTAATAAAGTGGATGCATGCATCGTTCAGATGCAGAGACCGGGGTCCTGCTCCATTTCTAAAAGA
AAAGGCAAGAGTTTGTCGTGAAAATAATAATGAAAATGATTCTACCAGACGAAGTCTATTTTAATGAAAACTCTAATGTT
CCTGAATTTCATGGATTTTCCCAATATCGCCGATTCCCGGCGATCTCGATGGAACGCCGAAATTTCGGCTGTTGGTCTGC
GGCATTGCAAGTTGTACATGAGCG----------------------------------GCTGTTTGTTTTACCATGCACG
GCACGTCGTTTGCAAAAATCAGCAGATTTCCATGTGTATTGGCAACCTGCT---GGAATCAAACCGTACCACTAGTTGTC
ACTGATGGCGACAAAGCTGCATTGAACAACCGCAAGATCGAGGCTCCAGATGAAACTCAAGCCCGTTTTGAATTTTCAGG
AAGAT-------------------------GGCACATGCGTTTCCAGTGTTCCAGAGCGTAAAAAACTCGGCAGCCGAGG
ACAACAGCGGCACCACTGCTGGTGATTCTGCACTGTTTAGTTTATCTGCTACATATGCTAACTATAA----------CTA
AGCTCGGCCAGTGACAGTCGTCCAGTCCACTTGGATAGAGCCCAGGCCGAGGGCGATGCCATTGCCACTTGCCATGCCGG
ACAGGCGCCGCCCAACGATGCCCGCCA------GTCGAGCTCCAGCGGGGCTCCCGTCGGGCAGAGGCCACCGTCGCACG
TGTGGCTCCGCGCATCGGCGCTGCTCCGGCCGCTCACCGCTCGGGATCCGGTCTC
>chr5D_17
----------------CGGCAGGCAAACAGTTTGTTAGTAGGAGTAGCTTTCTATGGACTACTGTT------TGATGTCG
TTTGCATGCCGCTTTTACCCGCACGCTCGGTGGCGAAAATGGAATTGTAACATACAAT----------------TAATTG
TTA-----------------------------------------------------------------------------
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----------------------------TTCCCAGTTCCTTCTATGGAGGTTATTGTGTGCAATCAGCTACTAGTATTTG
TACCACTGGTGCATGCTCTCTCCAAATTGCGTGAATAGATG-TTTTTTTCAGAGGGAAATGTTGAGTTATAGTGAGGGGC
AACTCTAGTCTTTCCGTAGAGAAATATAAAAGCGTTTAGATCACTAAAATGATGATTTATGCGCTCTTATATTTCCCAGA
GGGAGTACAAAGAATTC---------------------------------------------------------------
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--------------------------------------------------------------------TTTTTCATCAAA
TTTACTGCCCCTGAAATTTTGACAGATTCATAAGAGAAATTTTGCAA--GTTTTTTAACTCCAGGA-AAACCTAGCCTAG
TGCAGTAGTA--TTCCGCCAT-------TTGCCATTTTGCACTGTGCCGA-------GACGAGA-------CGAA-----
CCCAGCCAAAACTCCCTCCTCCTC------ATGGCTGGCTGTTAGTAATCCAAACGTAGTAAAACTAGAATAGTTTATTG
AGTCGGTTTGTTCTTCCGTGTAATAGGCGTCATGTACTAGTATGGCAGGGTACGTGGGTTTTGTACCAGGAAAACGAAAA
GCAATAAAGAGATTATTACGAGGCACGACACGTGCCTCTGGCCAACTTCGAGTTGCTGCGTTCGTGTGTGTGTTCCGGTC
CCGGTGTTTGCGAGCGCCGGCGAACTATCAAGTGCTACAGCTAGTTCGTATACGTCGAGACGAGTAGCGCGCACACAACC
TGTCAGGCTGCAGCGTGATCGTGTGTTCGATCCTTGTGAAAAGCCAACAATTGGTATCTAGAGCAAGGTGTGAAGGCTTC
GCTGTCAAGTTGTGTCACGGCGGAATTAAAGGATTCTTCGTCCCCGTCAAATTGTGTCACGGATGACGGAAAATCGATGA
GGATCATGTCGACTTCGAAGGCAAGTGGTGGTGGTCTGACCATCCAGTACCCCATGCATGAAGGCGACAATTATGGGGTG
TGGGCTGCGAAGATGAAGATCTTCATGCGTGCACATGGAGTCTGGGCATCGGTGGAAGGTAATGGTGCGGTTGAAGAGAC
AAAGGACCAAGAGGCTTTCGCCGCCATAGCCCAAGTTGTGCCTGATGCCGTTTTCATGACCATACTGGATAAAGAGACGA
CAAAGGAAGCTTGGGAAGCTCTCAAGGAGATGCATGCTGGAGATGATCGTGTCAAGAAGGCTCGTGTTCAAGCTCTAAGG
AGGGAGTTCGAGAGGATAAGCATGAAAGAATCAGAAGGGGTCGGTGAATTTGCGTTGAAGCTAACCTCCCTGGTTAATGA
GATGGGGGCTCTCGGATCAAAGATGGAGGACATCGCAGTTGTGGAGAAGTTACTACGAGCCGTTCCCGATAAGTTTTTAC
CGATCGTTGGCACCATAGAGCAGTGGGGCGATGTGACGAAGATCTCGGTGATGGAGGTGATCGGGAGGCTGAAGACCTAT
GAGTTGACGTTGAAGGGGCGTGAACGCGACCAAGAAGAAGAGCATTTGATGTTCTTGCGTAGTAGGGAGAAAGATAAGCA
GAAGTACCGGAAGTTCGACAAATCTAAAGTCCGTTGCTACAATTGTCAGGACCATGGACACTATTCGCGAGAGTGTCCTA
ATCCGCGGAAGGAGGCAAAGAAGGAGCACGGGACTCTACAACTAGCTGAAGTGGGCATGGATGACGACCCGAGGTTGCTT
TAATAAAGAAGTGGCGATTGAAAAAAACAAAAACAAAAAGAGTCGTGTCATTAGTTTTGTTTGTGTTTGAATCGTCCGTG
TGTCTCGGCGAGAAGACGAAGGCCAGCGTGAAGATGGATGCAATCGGTTAAGTTGAGTTCCTGCATGAGAGGCTATGTGT
TTAGTCTACATGTAGCACGCTAAAATGTGATGGCGTGGGCTGGTAATCCAGGTGATGTGATGGTTCTGAGTCTACGAGTG
GAAAGTTTGAATTAGGGGGTGAATGTTAATCCAAACATAGTAAAACTAGAATAGTCTATTGAGTCTGTTTGTTCTTCCAT
GTAATAGGCGTCATGTACTAGTATGGAAGGGTACGTGAGTTTTGTACCAGAAAAATAAAAAGCAATAAAGAGATTATTAC
GAGGCACAACACCTGCCTTTGGCCAACTTCGAGTTGCTGCGTTCGTGTGTGTGTTCTGGTCCCGGTGTTTGCGTGAGCGC
TGACGAACTATCAAGTGCTACAGCTAGTTCGTATACGTCGAGACGAGTTGCGCATACACGACCTGTCGAGCTGCAGTGTG
ATCGTGTGTTCGATCCTTGGGAAAAGCCAACAACGGCAACTGTGTGACCTCCTGCTCCCCCTCTC-CTCTGCTCTGCCCC
TCCACCACCACCTCCCTCTCCC-------CCAGAGCTCACCACACACCACTAA-TCCACCGACAGAAGCGAGGCATGGGG
CCGCGCGCGCGATGGGCAACTGCCAGGCGGCCGAGGCGGCAGAGGTCATCGTCCAGCACCCCGGTGGCAAGGTGGAGCGC
CTCTACTGGCCCACCCCCGCCGCCGAGGTCATGAAGACCAACCCCGGCCACTACGTAGCGCTCGTCATCCTCCGCTTCTC
CCCCGGCGACAAGGCGG---------------------------CCGCCGTCGGTGGCGCGGGCGCCGCTGCCAAGATCA
CCCGGGTCAAGCTCCTCAAACCCAAGGACGTGCTCCACCTCGGCCTGGTCTACCGCATCAT-------------------
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>chr5B_956
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----------------------------------------------CCACTAGCTCCGCCAGCACAAGCGAGGCGCGGGG
------GCGCGATGGGCAACTGCCAGGCGGCCGAGGCGGCGGAGGTCATCATCCAGCACCCCGGCGGCAAGGTGGAGCGC
CTCTACTGGCCCACCCCGGCCGCCGAGGTCATGAAGACCAACCCCGGCCACTACGTCGCGCTCGTCATCCTCCGCCTCTC
CCCCGAAGACAAGGCGGCAGCGGGGGACGAGGCCGCGGCGGCGGCCGCCGTCGCAGGCGCGGGCGCCGCCGCCAAGATCA
CCCGGGTCAAGCTCCTCAAGCCCAAGGACGTGCTCCACCTCGGCCAGGTCTACCGCCTCATCACCGCGCAAGGTTCGTCT
ACAGTCCTCCACTCCTC-------CCTGCGTTCATCGAC--------------------GCTCTTCTTCCTCGTCGTCCA
TGGCACGGAGCT---CGTTCCCGCCATCCCGTGCCTGGATTCCGCCGTTCGTTGCATCAATCTA-----GTTCTAATCGA
TGCTTGTTGGTGTTGCGCTGCGCAGAGGTGACCAAGGCGCTGCGGGCGAGGAAGAACGACAAGATGCGGCGGTGCGAGGC
CATCAAGCAGCAGCACGACCAGCTCCGGCGCGGCGACGGGGCGGAGCAGGGCGCCTCTGACAAGGTCAGCGCCTCTCCAT
TCTCCTGATGATAATCTCCTCTTCCTATCTGAAACCGCACGAAGCAGTATACTGATTCCTATACGCGCTCCTGCCTCCTC
AGGACGCGAACGCGAACGCGAAGCAGCGGGGCGAGAAGGACCGGCACCGGGGCTCCGGCGGCGCGCAGCCGGCCGGTGGC
GGCAGAGGCCGGCACTGGCGGCTGTCCCTGCAGAGCATCTCCGAAGCCGCGGCCGGGCAGAGCAGCAGCGCCAGCAGCAG
CATCTCCGAATCCACTGCGAGCTAATCGCCGGATTAACAA----------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>SNPs
---------S----------------------------------------------------------------------
----------------S------S--------------------------------S----------------------S
---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSS---S--------S-----S-SS---S-----S---------------S----
--S--S--------------S-SSSS-------------------------------S--------------S-------
-------S------S-----------------------------------------------------------------
------------------SS------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
--------S-----------------------------S----SSS-S-----------------------SS-S-----
--------SSSS--------------------------------------SSSSSSS--------S----S---------
-------------------------------------S------S-S---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------S--SS-SS----------------------------------------------------------S-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
------------------------------S------------SSSSS--------------------------S-----
---S-SS--------S-------------------S--------S---S-------------------------------
------S--------------S----------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S----------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
--------------------------------------------------------------------------------
---------------S-----------------------------------------------------------SSS--
--------------------------------------------------------------------------------
-------SSSSSSSS------S-S--------------S-S----S--------------S-----------S-----SS
--S--S-S-SSSSS-SS--SS-SSSSS-SS-SSS----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--SS-----S----S--SS-S-SS-SS-SS--SS-SSSS----SSS-SSSS-SSSS-SSS-S--SS--S-SSSSS--SSS
-S-SSSSSSS--SSSSSSSS-S-S--------------------------------------------------------
-------------S---------S--------------S-SS---------------S--------S-------------
---------------------S------S---------------------------------------------------
------S-----------S-----------S---------------------------------S---------------
---S-SSSSSSSSSSSSSSSSSSSSSSSSS----------------SSSSSS----------------------------
--------------------------------------------------------------S----SSSSSSSSSS---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>forward_304
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------AAAGACTGAATGAGCCGGCA----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------
>reverse_4879
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------------------------AT
GCAACCTCGCAATCTCGA--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
