>input_sequence_66616
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---ATCGGAGTTCAAGCGCGAGCACGAAAGCACACGCAGTCGCTAACACTTGCTCTCTACTGATATCGATCGATGGCCAT
GGTAGCGAGAGCCGCGCTGCTCCTGGCCATGGTGGTCGTGGCAAGCGCCACCTACTGCCCCCCGCCGCCGGCGCCGGTGC
CGGTGCCCCGCTACGGGTCGTGCCCCCAGAACGCGCTCAAGCTGCACGTCTGTGCCAACGTGCTGAACCTGGTGAAGGCC
AAGATCGGCGTGCCGCCAGCGGAGCCCTGCTGCTCGCTCCTCGACGGGCTTGTCAACCTGGACGCCGCCGTCTGCCTTTG
CACCGCCATCAAGGCCAACGTGCTGGGAATCCACCTCAACGTCCCCATCGACCTTAGCCTCATCCTGAACAACTGCGGCA
AGATCTGCCCGGCCGACTTCCAGTGCATCCACTAGGAAAGCTAGAAGTGCA----CAGTACTATCCATCGAGTGGGGTGT
GTGGTTTGCTTTGGTTTCAAGCTTTTTGCTTTATTTATTTCTTAAATCTATGCTGGCAATCTGGCCTAGTATGTATGTTC
TCGCTTTCACACGAGAGGTAGCATTATGATCCTTTGGAAATTTAATTGAAGTAGTGATTTCATGAGATTGGAGCGCATTC
TTACAGTATCTCCAACAGTCGTGCAACACGCGCATCACGCTAAAAAAACATTTACAACATCGTAGTCGTGAGT-TTCC-G
CGCGGCGAGGAGCGCTTGCTACAGCGACCG-CCGCAAAG-TA-TAGCGCGCGCGAGTCGCTCGAGCAGCCGCTGCAAAAA
AAC-TGC----A--CGCTCTAGCACAAATAACATATACGCTTCAAACACAACCAAAAAAATCAAACACAAACAAAGTAAA
TCAACAATAAA---------------------------------------------------------------------
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>chr1A_1_TraesCS1A01G210000
CTCCAGCCGCCCGTTCATTGACCCTCCACGTGCCGACGGCCGGCCAAGGGCCACACCACAACGGATCTTAACTAGGATCA
GACACGGCCGCCACCACCAACCATCACATGAGAGCATGTTGGAGACCGATCCCCGTTGACCCTCCCGCCATGGGGGCAAC
TGCCGCCACCGTCTGGCCACAAAACTCTGCCTTGGCCGCCGCGCTCGCTGGTCCTGCGACCACAACCCGCCTCCCCGGAG
AGGATCCCCCGTCGATGGTCCATGAGACAGTCGGGGATCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCTTAGCTTGATCTTGGTATTC
ACCCTCGGCAGCACGCAGCCCTTGGGCATTCCAAAGGTGAGGAGAGCAGCAAAATAGTTGTAGGCTAC------------
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-----------------------AGCTTGGAAGGTTTTTGTTGGTATTCGACTCTTCCAACGCATTAAACAATTCAACGA
GAACTTGGAATCAATTTGATGCAAACAACATCGTGGATGACCTAATGCAGCAAGCAATTAGCTACTAGTAGAATATACCC
CATATGCAACAAGAATACAAAGTGAAGTCCATTACGCGGTTCAACGAGACAAACCATGCATTCACGGGTGCATGCTCATC
CAAATCCAAGGAAAACACCAC-------CACAACGCGAATGCATGATCCTGACGCGCCAGCTCGGAAAATCACATGCTGT
CTCTTCACGGACGTGTAGACTCCCATTTGCCGAGGTCGAAGGG-TAGCTACAAATACGCCTCTCCATGCGGTCACACTGG
TGCATCGGAGTTCAAGCGCGAGCACGAAAGCACACGCAGTCGCTAACACTTGCTCTCTACTGATATCGATCGATGGCCAT
GGTAGCGAGAGCCGCGCTGCTCCTGGCCATGGTGGTCGTGGCAAGCGCCACCTACTGCCCCCCGCCGCCGGCGCCGGTGC
CGGTGCCCCGCTACGGGTCGTGCCCCCAGAACGCGCTCAAGCTGCACGTCTGTGCCAACGTGCTGAACCTGGTGAAGGCC
AAGATCGGCGTGCCGCCAGCGGAGCCCTGCTGCTCGCTCCTCGACGGGCTTGTCAACCTGGACGCCGCCGTCTGCCTTTG
CACCGCCATCAAGGCCAACGTGCTGGGAATCCACCTCAACGTCCCCATCGACCTTAGCCTCATCCTGAACAACTGCGGCA
AGATCTGCCCGGCCGACTTCCAGTGCATCCACTAGGAAAGCTAGAAGTGCA----CAGTACTATCCATCGAGTGGGGTGT
GTGGTTTGCTTTGGTTTCAAGCTTTTTGCTTTATTTATTTCTTAAATCTATGCTGGCAATCTGGCCTAGTATGTATGTTC
TCGCTTTCACACGAGAGGTAGCATTATGATCCTTTGGAAATTTAATTGAAGTAGTGATTTCATGAGATTGGAGCGCATTC
TTACAGTATCTCCAACAGTCGTGCAACACGCGCATCACGCTAAAAAAACATTTACAACATCGTAGTCGTGAGT-TTCC-G
CGCGGCGAGGAGCGCTTGCTACAGCGACCG-CCGCAAAG-TA-TAGCGCGCGCGAGTCGCTCGAGCAGCCGCTGCAAAAA
AAC-TGC----A--CGCTCTAGCACAAATAACATATACGCTTCAAACACAACCAAAAAAATCAAACACAAACAAAGTAAA
TCAACAATAAATAGTTCAATTTTATTATTACAACTCAAATAAATAGTTTATCTTGCAATACAACATATAGTTCAACAATA
CAATATCAACCATACAAATCAAGATGCTCTTTGTCGGCCATTTCATGCCCACGGCTCCTTGATGAGATTCTTCTGAAAAT
CATCATGTGTTTCGGCACGTCGAATGGCATTGATAGGATGCAACAAATCGGGCCACCCTCGCAGCCCTCCGCCGCACTCG
CACGGGATGTCCCAAGAGCTCGTACTGAGAGTAGTCTAAATCTTGGCCACGCTCATTCTTGATGATCATGTTGTGCATGA
TCACACAAGCATGCATGATGTACCAAAGCATC-TTTTGATCCCAAAATATAGCCGGTCCTCTCACAATGGCAAATTGGGC
TTGCAAAATCCCAAAAGCTCTCTCCACATCTTTACTAGCCACCGTCTGAGCATTGTGGAAATCAAGA-TTTTTCTTACCT
TCCG-GTTTTTTCAACGGCTTCACAAATGTTTGCCACTTTGGGTAGATGCCATCCGCAAGATAGTAGCCATAGTTGTATG
TATGACCATTTGCTACAAACTGCACCGATGACAGTTCACCATTTGCTATCTTATTCATGAGTGGTGACCGATTAACAACG
TTGATGTCATTCAAAGACCCAGGCATTCC-AAAAAAAACATGCCAAATCCAAGTCACTTGATCGGCCACTGCTTGAAGGA
TTATAGTGGAGCCCTTTTTTGA-CCGTGGAATTGTCCTTGCCATGCCTTAGGACAGTTCTTCCAATTCAAATGCATGCAA
TCTATTGAGCCAAGCATACCTGGGAACCCGCAAGTTTTGTTCATCTTCAAAAGCCTTGTAGCGTTTTCATCATTGGGAGA
TCCCAAATACTCCTGGCCAAACACTTGCACAATTCCGACTGTGAAGCGCTAGACACACATGATGCCCTGGCTCTCACCCA
TGGCCAAGTGGTCATCAACTACATCAGCCGGAATACCGTATGCCAACATACGCAAA
>chr1D_1
CTCCGGCCGCCCCA-CATCGACCCTCCACGCGCCGACGACCAGCCAAGGGACACACCGCAACGGATCTTAACTAGGATTG
GACACGGCCGCCGCCACCAACCATCGCATGAGAGCATGTTGGAGACCGATCCCCACTGACCCTCCCACCATGGAGGCCAC
TGTTGCCGCCGTCTGACCAGAAAACTCTGCCCTGGCCGCCGCGCTCGTTGGTCCTGCGACCACCACCCGCCTCCCCGAAG
AGGATCCCCCATCGATGGTCCATGAGACAGCCGAGGATCAGATCCCCGCCGCCCCATTACGGACACAATGCAACCTTGGC
CGGCAGAGAGGGTGGGGGGGATGGCGACAGCCGCCTAGGGTTGCGGGAGGTGGATATGT---------------------
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---------------------------------------------------------CGCTTAGCTTGATCTTGATATTC
ACCCGGGATGGCACCCGAAGGGTTTGGGTATGGGTGGAGCCACCCCATACCCTTACCCGTCCCATTTGAGCGTACCCGTA
CCCATACCCACTAGTGGGTACAATTTTACCTCATACCCGTCACCCGACAGGGTAAATGGGTACCGGGGGTAAAAATACCC
ATGTTTGAATAACATTAATTTGAGCATCACATAATAAACAACAACAACATATAATCATAGTTTATAAACAACAACACATA
ATAACATCAATACATACTTATAAACAACAACACATCCTAAACAACAACACATTCTATGAAAAATCAACACCTTCTTGTAA
ACAATAACACATCAAAACATCTAACATATAGTCATAAATAGTACTCCCTCCGTCCCAAAATAAGTGTCTTGAGCTTAGTA
CAAATTTATATTAGAGCTAGTACAAAGTTGAGACACTTATTTTGAGACGAAGGAAGTAGCACATAGTCATACATTTCAAA
TTGACAAACTCATGACAAAGTGTAGAGGTAATTTATCCATATTTGTTAGATTTTATAAGGGTACATGGGTATGCGGGTAT
GGGTTATGTGATCTCATACCCATACCCGCTCTATCCTATGGGTTTGAGATTTGCCTATTTATATACCCATGGGTAACATT
TTATCTCATACCCTTACCCTAATAGGGTTTTTACCCGCAGAGTACATGGGTAATGAGTACCCATTGCCATCCCTCTTCAC
CCTCGGCGGCAATTGTAGGTGACAGGTTGGAAGGTTTTTGTTGGTATTCGCCTCTTCCAACGCATTAAACATTTCAACGA
GAACTTGGAATCAATTTGATGCAAACAACATCGTGGATGACCTAATGCAGCAAGCAATTAGCTACT---AAAATATACTC
CATATGCAACAAGAATACAAAGTGAAGTCCATTACGCGGTTCAACGAGACAAACCATGCACTCACGGGTGCATGCTCATC
CAAATCCAAGGAAAACACCACCACAGTCCACAACGCGAATGCATGATCCTGACCCGCCAGCTCGGAAAATCACATGCTGT
CTCTTCATGGACGTGTAGACTCCCATTTGCCGAGGTCGAAGGCCTAGCTACAAATACGCCTCTCCATGCAGTCACACTGG
TGCATCAGACTTCAAGCGGGAGCACGAAAGCACACGCAGTCGCTAACACTTGCTCCAT--TGATATCGATCGATGGCCAT
GGTAGCGAGAGCCGCGCTGCTCCTGGCCATGGTGGTCGTGGCAAGCGCCACCTACTGCCCCCCGCCGCCGGCGCCGGTGC
CGGTGCCCCGCTACGGGTCGTGCCCCCAGAACGCGCTCAAGCTGCACGTGTGTGCCAACGTGCTGAACCTGGTGAAGGCC
AAGATCGGCGTGCCGCCAGCGGAGCCCTGCTGCTCGCTCCTCGACGGGCTCGTCAACCTGGACGCCGCCGTCTGCCTTTG
CACCGCCATCAAGGCCAACGTGCTCGGTATCCACCTCAACGTCCCCATCGACCTTAGCCTCATCCTGAACAACTGCGGCA
AGATCTGCCCCGCCGACTTCCAGTGCATCCACTAGGAATGCTAGAAGTGCATGCACAGTACTATCGATCGAGTGGGGTGT
T--GTTTGCTTTCGTTTCAAGCC-TTTGCTTTATTTATTTCTTAATTCTATGCTGGCAATCTGGCCTAGTATGTACGTTC
TCGCTTTCACACGAGAGGTAGGATTATGATCCTTTGGAG-TTTAATTGAAGTGGTGATTTCATGAGATTGGAGCGCATCC
TTACGGCATCCCAA------------------------------------------------------------------
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>chr1B_629
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-----------------------AGCTTGGATGGTTTTTGTTTTTATTCGCCTCTTCCAACGCATTAAACATTTCAGGGA
CAACTTGGAATCAATTTGATGGAAACAACATCATGGATGACCTAATGCCGCAAGAAATTAGCTACT---AGAATATACTC
CATATGCAGCAAGAATACAAAGTGAAGTCCATTACGCAGTTCAATGAGACAAACCATGCACTCACGGGTGCATGCTCATC
CAAATCCAAGGAAAATACCACCA-------CAACGCGAATGCATGATCCTGATGCGCCAGCTCGGAAAATCACATGCTGT
CTCTTCACGGACGTGTAGACTCCCATTTGCTGAGGTCGAAGGCCTAGCTACAAATACGCCTCTCCATGCGGTCACACTGG
TGCATCAGACTTCAAGCGGGAGCACGAAAGCACACGCAGTCGCTAACACTTGCTCCAT--TAATATCGATCGATGGCCAT
GGTAGCGAGAGCCGCGCTGCTCCTGGCCATGGTGGTCGTGGCAAGCGCCACCTACTGCCCCCCGCCGCCGGC------GC
CGGTGCCCCGCTACGGGTCGTGCCCCCAGAACGCGCTCAAGCTGCACGTGTGTGCCAACGTGCTGAACCTGGTGAAGGCC
AAGATCGGCGTGCCGCCAACGGAGCCCTGCTGCTCGCTCCTCGACGGGCTCGTCAACCTGGACGCCGCCGTCTGCCTTTG
CACCGCCATCAAGGCCAACGTGCTCGGGATCCACCTCAACGTCCCCATCGACCTTAGCCTCATCCTGAACAACTGCGGCA
AGATCTGCCCCGCCGACTTCCAGTGCATCCACTAGGAATGCTAGAAGTGCATGCACAGTACTATCGATCGAGTGGGGTGT
T--GTTTGCTTTCGTTTCAAGCC-TTTGCTTTATTTATTTCTTAATTCTATGCTGGCAATCTGGCCTAGCATGTACGTTC
TCGCTTTCACTCGAGAGGTAGGATTATGATCCTTTGGAG-TTTAATTGAAGTGGTGATTTCATGAGATTGGAGCGCATCC
TTA-----------------------------------------------------------------------------
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>chr2D_1632
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------------------------------------------------------------------------------TC
TTAGAGCATCTCCAACAGCCGTGTGATGCGCAG--TGCGCTAAAAAAGCATTTTCAGCGTGCTAATCGCGAGT-TTCTTG
CGTGGCAAGGAGCGCTTGCTCTAACGGCTG-CTGCAAAG-TT-TAGCGCGCGCGAGCCGCTCCAGCAGCCGCTGCAAAAA
AAACTGCACGCG--CGCCCTCGCACAAACAACATATGCACTCCAAACACAACCAAAAAGATCAAACACAAACGAAATAAA
TCAACAATAAATAGTTCAATTTTATTATTACAACTCAAACAAATAGTTTGTCTTGCAATAGAACAAATAGTTCAACAATA
CA-CATCAAACATACAAATCATGATGCTTTTTGTCGGCCATTCCATGCCCACCACTCCTTGATGAGATCCTTGTGAAGAT
CATCGTGTGTTTCGGCACGTCGAATGGCAT-AATAGGAGACAACAAAACGGGCCACCCTGGCAGCCCTCCGCCACACTCG
CACGGAATGTCCCAAAAGCTCATACTGAGAGTAGTCTAAATCTTGGCCACGCTCATTCTCGATGATCATATTGTGCATGA
TCACACAAGCGTGCATGATGTACCAAAGCATC-TTTCAATCCCAAAATCTAGCCGGTCCTCTCACAATGGCAAATTGGGC
TTGCAAAATCCTAAAAGCTCTCTCCACATCTTTCCTAGCCGCCGCCTGAGCATTGTGAAAATTAAGA-TTTTTCTTACCT
TCCA-GTTTTTTCAACGGCTTCACAAATGCTTGCCACTTTGGGTGGATGACATCTGCAAGATAGTATCCACAGTTGTATG
TATGGCCATTTGCTACAAACTGCACCGGTGGCAGTTCATCATTTGCAATCTTATTCATCAATGGTGACCGATTAACAACG
TTGATGTCATTCAAAGATCCAGGCATTCC-AAAAAAAGCATGCCAAATCCAAGTCTCTTGATCTACCACCGCTTCAAGGA
TTATAGTGGAACCCTTTTTTGG-CCGTGGAATTGCCCATGCCATGCCTTAGGACAGTTTTTCCAACTCCAATGCATGCAA
TCTATTGAGCCAAGCATACCTGGGAACCTGCGAGCTTTGTTCATCTCCAAAAGCCTTGCACAGTCTTCAGCATTGGGAGA
TCTCAAATACTCCAGGCCAAACAATTGCACAATTGCGACTGCGAAGCGCTTGACACACATGATGGCTTGACTCTCACCCA
TGGCCAAGTGGTCATCAACTAGATCAGCCGGAATACTGTATACCAACATATGCAAA
>chr4B_1632
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------------------------------------------------------------------------------TC
TAAGAGCATCTCCAACAGCCGCGCAATGCGCGG--CGCGCTAAAAAAGCGTTCGCAGCGCGCTATTCGCGAGT-TT-TTG
CGCGGTGGAGAGAGCTTGCTCCAGCAACCG-TTGCAAAG-TT-TAGCGCGCGCGAGCCGCTCCAGCAGCCGCTGCAAAAA
AAC-TGCGCGCG--TGCTCTCGCACAAACAACATATGCACTCCAAACACAACCAATAAGATCAAACACAAACAAAATAAA
TCAACAATAAATAGTTCAATTTTATTATTACAACTCAAACAAATAGTTTACCCTGCAATAGAACAAATAATTCAACAATA
CAACATCAAACGCACAAATCATGATGCTCTTTGTTGGTCATTCTATGCCCACCACTCCTCGATGAGATCCTTTCGAAGAT
CATCATGTGTTTCGGCACGTCGAATGACAT-GATAGGAGGCAACAAAATGGGCCACCCTAGCAGCCCTCCGCCGCACTCG
CATGGGATGTCCCAAGAGCTCATACTGAGAGTAGTCTAAATCTTGGCCATGCTCATTCTTGATGATCATGTTGTGCATGA
TCACACAAGCGTGCATGACGTACCAAAGCATC-TTTTGATCCCAAAATCTAGCTGGTCCTCTCACAATAGCAAACTGGGC
TTGAAAAATCCCAAAAGCTCTCTCCACATCTTTCATAGCCGCCGCCTGAGCATTGTGGAAATCAAGA-TTTTTCTTACCT
TCCA-TTTTTTTCAACGGCTTCACAAATGTTTGCCACTTTGGGTAGATGCCATCCGCAAGATAGTAGCCATAGTTGTATG
TATGGCCATTTGCTACAAACTGCACCGGTGGCAGTTCACCATTTGCAATCTTATTCATCAGTGATGACCGATTAACAACG
TTGATGTCATTCAAAGATCCAGACATTCC-AAAAAAAGCATGCCAAATACAAGTCTCTTGATCGGCCACCACTTCAAGGA
TTATAGTGGAACCCTTTTTTGG-CCATGGAATTGCCCGTGCCATGCCTTAGGACAATTCTTCCAACTCCAATGCATGCAA
TCTATCGAGCCAA-CATACCTGGGAAGCCGCGAGCTTTGTTCATCTCCAATAGCCTTGTGACATCTTCAGCATTGGGAGA
TCTCAAATACTCCTGGCCAAACACTTGCACAATTCCGACTACGAAGCGCTTGACACACATGATGGCTTGACTCTCACCCA
TGGCCAAGTGGTCATCAACTAGATCATCAGGAATACCATATGCCAACATACACAAA
>chr5D_1633
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-------------------------------------------------------------------------------C
TTAGAGCATCTCCAACAGCCGTCCAACGCGTGA--CACGTTAAAAATCAGTTTGCAGCATTTCGATTGTCTGA-TT-TGG
CGCGGCGAGGAGCGCTGGCTCCAGCGGCCG-CAGT-AAA-TT-TAGCGCGCACACGTAGCTCCAGCAGGCGCGTTAAAAT
GCA----GCGCA--CGCTCTCGCACAAATAATATATGCGCTCCAAACACAAGCAAAAAGATCAAACACAAACAAAATAAA
TCAACAATAAATAGTTTAATTTTATTATTACAACTCAAACAAATAGTTTATCTTTCAATGCAACAAATAGTTCAACAATA
CAACATCAAACGCACAAATCATGATGCTCTTTGTCGGCCATTCCAAGCCCACCACTCCTTAATGAGATCCTTCTGAAGAT
CATCATGCGCTTTGGTACGTCGAATGGCAT-GATAGGAGGCAACAAAACTGGATACCCTTTCAGCCCTCCGCCGTACTCG
CACGGGATGTCCCAAGAGCTCATAGTGAGAGTAGTCTACATCTTGGCCACGCTCATTCTCGATGATCATGTTGTGCATGA
TCACACAAGCCTGCATGATGTACCAAAGCATC-TTTTGATCCCAAAATCTAGCCGGTCCTCTCGCAATATCAAATTGGGC
TTGCAAAATCTCAAAAGCTCTCTCCACATATTTTCTAGCCGCCGCCTGCGCATTGTGGAAATCAAGA-TTTTTCTTACCT
TCCG-GTTTTTTCAACGGCTTCACAAATGTTTGCCACTTTGGGTAGATGCCATCCGCAAGATAGTAGCCATAGTTGTATG
TACGGCCATTTGCTATAAACTGCACCGGTGGCAGTTCACCATTTGCAATCTTATTCATCAGTGATGACCGGTTGACAATG
TTGATGTCATTCAAAGATCCAGGCATTCCAAAAAAAAGCATGCCAAATCCAAGTCTCTTGATCGGCCACCACTTCAAGGA
TTATAGCGGAACCCTTTTTTGGGCCGTGGAATTGCCCATGCCATGCCTTAGGACAATTCTTCCAAATCCAATGCATGCAA
TCTATTGAGCCAAGCATACCTGGGAAGCCGCGAGCTTTGTTCATCTCCATTAGCCTTGCGGCGTCTTCAGCATTGGGAGA
TCTCAAATACTCCTGGCCAAACACTTGCACAATTTCGACTGCGAAGCGCTTGACACACATGATGGCTTGGCTCTCACCCA
TGGCCAAGTGATCATCAACTAGATCAGCGGGGATACTGTATGCCAACATACGCAAA
>chr7B_1633
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-------------------------------------------------------------------------------C
TTAGAGCATCTCCAACAGCCATGCTACGCGCGG--TGCGTTAAAAAAGCGTTTGCAGCACGCAGTTCGCGAGT-TT-TTA
CGTTGCGCGGAACGCTTGCTCCAGCGGCCG-CTGC-AAAGTT-TAGCGCGCGCGAGCCGCTCCAGCAGCCGCTGCAAAAA
AAC-TGTGCGCG--CGCTCTCGCACAAATAACATATGCACTCCAAACACAATCAAGAAGATCAAACACAAACAAAATAAA
TCAGCAATAAATAGTTCAATTTCATTATTACAACTCAAACAAATAGTGTATCTTGCAATATACCAAATAGTTCAACAATA
CAACATCAAACACATAAATCATGATGCTCTTTGTTGGCCATTCCATGCCCACCACTCCTCGATGAGATCCTTCTGAAGAT
CATCATGCATTTCGGCACATCGAATGGCAT-GATATGAGGCAACAAAACGGGCCACCCTAGCAGCCGTGCGCCACACTCG
CACGGGATGTCCCAAGAGCTCATACTGAGAGTAGTCCAAATCTTGGTCACGCTCATTCTCGATGATCATGTTGTGCATGA
TCACACAAGCGTGCATGATGTACCGAAGCATC-TTTTGATCCCAAAATCTAGCCGGTCCTCTCACAGTAGCAAATTAGGC
TTGCAAAATCCCAAAAGCTCTCTTCACATCTTTTCTAGCCGTCGCCTGAGCATTGTGGAAATCAAGA-TTTTTCTTACCT
TCCG-GTTTTTTCAACAGCTTCACAAATGTTTGCCACTTTTGGTAGATGTCATCCGCAAGATAGTAGCCACAGTTGTATG
TATGGTCATTTGCTACAAACTGCACCGATGGCAGTTTATCATTTGCAATCTTATTCATCAGTGGTGACCAATTAACAACG
TTGATGTCATTCAAAGATCAAGGAATCCCAAAAAAAAGCATGCTAAATCCAAGTCTCTTGATCGGCCACCGCTTCAAGGA
TTATAGTGGAATCCTTTTTTTGGCCGTGGAATTGCCCATGTCATGCCTTAGGACAATTCTTCCAACTCCAATGCATGCAA
TCTATTGAGCCAAGCATACCTGGGAAGCCGCGAGCTTTGTTCATCTCCAATAGCCTTGCAGCGTCTTCAGCATTGGGAGA
TCTCAAATACTCCTGGCCAAACACTTGCACAATTCCGACTGCGAAGCGCTTGACACACATGATGGCTTGACTCTCACCCA
TGGCCAAGTGGTCATCAACTAGATCAGCGAGAGTACCATATGCCGACATATGCAAA
>chr7D_1641
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-------ATCTCCAACAGCCGCGCAACGCGTGG--CGCGCTAAAAAAGTGTTTGCAGCGCGCTGTTCGCGAGA-TT-TTG
CGCAGCGCGGAGCGCTTGCTCCAGCGACCG-CTGC-AAAGTT-TACCGCGCGCGAGCCGCTCCAGCAGCCGCTGCAAAAA
AAC-TGCACACG--CGCTCTCGCACAAGCAGCATATGCACTCCAAACACAACCAAGAAGATCAAATACAAACAAAATAAA
TCAACAATAAATAGTTCAATTTTATTA---CAACTCAAACAAATAATTTACCTTGCAACAGAACAAATAGTTCAACAATA
CAACATCAAACACACAAATCATGATGCTCTTTGTCGGCCATTTCATGCCCACCACTTGTCGATGAGATCCTTCTGAAGAT
CATCATGCGTTTCGGCACGTCAAATGGCAT-GATAGGTGGCAACAAAACGGGCCACCCTGGCAGCCCTCCGCTGCACTCG
CACAGGATGTCCCGAGAGCTCATACTGAGAATAGTCTAAATCTTGGCCACGCTCATTCTTGGTAATCATGTTGTGCATGA
TCACACAAGCGTGCATGATGTACCAAAGCATC-TTTTGATCCCAAAATCTAGCCCGTCCTCTCACAATAGCAAATTGGGC
TAGCAAAATCCCAAAAGCTCTCTCCACATCTTTTCTAGGCGCCGCCTGAGCATTGTGGAAATCAAGA-TTTTTCTTACCT
TCCG-GTTTTTTCAACGGCTTCACAAATGTTTGTCACTTTGGGTAGATGCCATCCGCAAGATAGTAGCCATAGTTGTATG
TATGGCCATTTGCTACAAACTGCACCGGTGGTAGTTCATCATTTGCAATCTTGTTCATTAGTGGTGACCGATTAACAATG
TTGATGTCATTCAAAGATCCAGGCATTCCAAC-AAAAGCATGCCAAATCCAAGTCTCTTGATTGGCCACCACTTCAAGGA
TTATAGTGGAACCCTTTTT--GGCCGTGGAATTGGCCATGCCATGCCTTAGGATAATTCTTCCAACTCCAATGCATGCAA
TCTATCGAGCCAAGCATACATGGGAAGCCGCGAACTTTGTTCATCTCCAATAGCCTTGCGCTGCCTTTAGCATTGAGAGA
TCTCAAATACTCCTGGCCAAACACTTGCACAATTCCGACTGCGAAGCACTTGACACACATGATGGTTTGACTCTCACCCA
TGGCCAAGTGGTCATCAACTAGATCAGCGGGAATACCGTATGCCAACATACACAAA
>chr1B_1665
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-----------------------------GCAG--CGCGTTAAAAAAGCGTTTACAACACTGTAATCGTGAGT-TT-TTA
CGTGACGAGGAGCGCTTGCTCCAGCGACCGGCTGCAAAG-TA-TAGCGCGCATGAGCCGCTACAGCATCCGCTGCAAAAA
AAC-TGCGCGCG--CTCTC-AGCACAAACAACACATGCACTTCAAACACAACTAAGAAGATCAAACACAAACAAAATAAG
TCAACAATAAATAATTCAATTTTATTATTACAACTCAAACAAATAGTTTATTTTGCAATATAACAAATAGTTCAACAATA
GAACATCAAACATAGAAATCATGATGCTCTTTGTCTGCCCTTCCATGCCCACCACTCCTTGATGAGATTCTTCTGAAGAT
CATCATGCGTTTCGGCACGTCGAATGGCAT-GATAGGAGGCAACAAAACGGGCCACCCTCGCAGCCCTCTGCCGCACTCG
CACGGGATGTCCCAAGAGCTCATACTGAGAGTAGTCTAAAACTTGGCCACGCTCATGCTCG-TGATCATGTTGTGCATGA
TCACACAAGCGTGCATGATGTACGAAAGCATC-TTTTGATCCCAAAATCTAGCCGGTCCTCTCACAATGGCAAATTGGGT
TTGCAAAGTCCCAAAAGCTCTATCAGCATCTTTCCTAGGCA---CCGGAGCATTGTGGAAATCAAGA-TTTTTCTTACCT
TCTA-GTTTTTTCAACGGCTTCACAAATGTTTGCCACTTTGGGTAGATGTCATCCGCAAGATAATAGCCATAGTTGTATG
TATGGTCATTTGCTACAAACTGCACCGGTGGCGGTTCACCATTTGCAATCTTATTCATGAGTGGTGATCGATTAACAATG
TTGATGTCATTCAACGATCCAGGCATTCCAAA-AAAAGCATGACAAATCCAAGTCTCTTGGTCGGCCACCGCTTCAAGGA
TTATAGTGGAACCCTTTTTTTGACCATGGAATTGGCCATGCCATGCCTTAGGACAGTTCTTCCAACTCCAATACATGCAA
TATTTTGAGCCAAGCATATATGGGAACCCGCGAACTTTGTTCATCTCCAAAAGCCTTGCACAGTCTTTAACATTGGGATA
TCTCAAATACTCCGGGCCAAACACTTGCACAATTCCAACTGCGAAGCTCTTGACACAAG-GATGGCTTGACTCTCACCCA
TGCCCAAGTGGTCATCAACTAGATCAGTCGGGATACCATATGCCAACATACGCAAA
>chr5D_1670
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------------------------------------ACGTTAAAAAAGCGTTTACAGTATCGGAATCACGAGTTTT-TTG
CGCGGCGAGGAGCGCTTGCTCCAGCAGCCG-CTGC-AAA-TTATAGCGCACGGGAACCGCTCCAGCAGCCGCTGCAAAAA
AAG-CGAGCATG--CTCTC-AGCACAAACAACATATGCACTCCAAACACAACCAAGAAGATCAAACACAAACAAAATAAA
TCAACAATAAATAGTTTAATTTTATTATTACAACTCAAACAAATAGTTTATCTTGCAATACAACAAATAGTTCGACAACA
CAACATCAAACATACAAATCATGATGCTTTTTGATGGTCATTCCATGCCCACCACTCCTGGATGAGATCCTTCTGAAGAT
CATCATGCGTTCCGGCACGTCGAATGTCCT-GATAGGAG-CAACAAAACGGGCCACCCTCGCAACCCTCCGCCGCACTCG
CATGGGATGTCCCAAGAGCTCATACTGAGAGTAGTCTAAATCTTGGCCACGCCCATTCTCGATGATCATATTGTGCATGA
TCACACAAGCTTGCATGATGTACCAAAGCATC-TTTTGATCCCAAAATCTAGCCGGCCCTCTCACAATGGCAAATTGGGC
TTGCAAAATCCCGAAAGCTCTCTCCACATCTTTCCTAGCCGTCGCCTGAGCATTGTGGAAATCTAGA-TTTTTCTTACCT
TCCGGTTTTTTTCAACGGCTTCATAAATGTTTCCCACTTTGGGTAGATACCATCCGCAAGATAGTAGCCATAGTTGTATG
TATGGCCATTTGCTACAAACTGCACCGGTGGCAGTTCACCATTTACAATCTTATTCATGAGTGGTGACCGATTAACAACA
TTGGCATCAATCAAAGATCCAGGCATTCC-AA-AAAAGCATGCCAAATCCAAGTCTCTTGATTGGCCACCGCTTCAAGGA
TTATAGTGGAACCCTTTTTTGG-CCGTGGAATTGCTTATGCCATGCCTGAGGACAGCTCTTCCAACTCCAATGCATGCAA
TCTACTGAGCCAAGCATACCTGGGAACCCGCGAGCTTTGTTCATCTCCAAAAGCCTTGCGGCGTCTTCAGCATTGGGAGA
TCTTAAATACTCCTGGCCAAATACTTGCACAATTCCGACTGCGAAGCGCTTGACACACATGATGACTTGACTCTCACCCA
TGGCCAAGTGGTCATGAACTAGATCAGCCAAAATACCGTATGCCAACATACGCAAA
>chr6A_1672
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--------------------------------------GCTAAAAAATCGTTTACAATGTTGTAGTCGTGAGTTT--TTG
CGTGGCGAAGAGCACTTGCTTCAGCGGCCG-CTGG-AAA-GTATAGCGCGCACGAGCCGCTCCAGTAGCTGCTGCAAAAA
AAC-TGCGCATG--CACTCTAGCACAAACAATATATGCACTTCAAACAGAACCAAAAAGATCAAACACAAATAAAATAAA
TCAACAATAAATAGTTCAATTTTATTATTACAACTCAAACAAATAGTTTATCTAGCAATACAACAAATAGTTCAACAATA
CAACATCAAACATACAAATCATGATGCTCTTTGTCGGCCATTCTATGTCCACCACGTCTCGATAAGATCCTTCTGAAGAT
CATCATGCGTTTCAACACGTTGAATGGCAT-GATAGGAGGCAACAAATCAGGCCACCCTCGCAGCCCTCCGCCGCACTCG
CAC-GGATGTCCCAAGAGCTCATACTGAGAGTAGTATAAATTTTGGCCACGCTCATTCTTGATGATCATATTGTGCATGA
TCACACAAGCATGCATGTTGTATCAAAGCATC-TTTTGATCCCAAAATCTAGCCGGTCCTGTAACAATGGCAAATTGGGC
TTGCAAAATTCCAAAAGCTCTCTCCACATCTTTCCTAGCCGCCGCCTGAGCATTGTGGAAATCAAGTTTTTTTCTTACAT
TTCG-GTTTTTTCAACGGCTTCACAAATGTTTGCCACTTTGGGTAGATGCCATCCGCAAGATAGTAGCCATAGTTGTATG
TATGGCCATTTGCTACAAACTGCACCGATGACAGTTCACCATTTGTAATCTTATTCATGAGTGGTGACCGATTAACAACA
TTGATATCATTCAAAGATCCAGGCATTCCAAA-AAAAACATGCCAAATCCAAGTCTCTTGATCGACCACTGCTTCAAGGA
TTATAGTGGAATCCCTTTTTTGGCCGTGGAATTGGCCATGCCATGCCTTAGGACAGTTCTTCCAACTCCAATACATGCAA
TCTATTGAGCTAAGCATACCTGGGAACCCGCAAACTTTGTTCATCTCCAAAAGCCTTGCGGCGTCTTCATCATTGGGAGA
TCTCAAATACTCCTGGCCAAACACTTGCACAATTTCGATTGCGAAGCGCTTGCCACACATGATGGCTTGACTCTCACCCA
TGGCCAAGTGGTCATCAACTAGATCAGCCGGAATACCGTATGCCAACATATGCAAA
>chr6B_1672
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--------------------------------------GCTAAAAAAGCGTTTACAGCGCTGGAGTCGCGAGTTT--TTG
CGCGGCGAGGAGCACTTGCTCCAGCAGCCG-CTGC-AAA-ATATAGCGCGCGCAAGCCGCTCCAGAAGCCGCTGCAAAAA
AAA-TGCGCGCGCTCTCTC-AGCACAAACACCATATGCACTCCAAACACAACCAAAAATATCAAACATAAACAAAAAAAA
TCAACAATAAATAGTTCAATTTTATTATTACAACTCAAACAAATAGTTTATCTTGCAATACAACAAATAGTTTAATAATA
CAACATCAAACATACAAATCATGATGCTATTTGTCGGTCATTCCATGCCCACCACTCCTCGATGAGATCCTTCTGAAGAT
CATCATGCGTTTCGGCACGTCGAATGGCAT-GATAGGAGGCAACAAATCAGGCCACCCTCGTAGCCCTCCGCCGCACTCA
CACGGGATGTCCCAAGAGCTTATACTGAGAGTAGTCTAAATCTTGGCCACGCTCATTCTCGATGATCATGTTGTGCATGA
TCACACAAACGTGCATGATGTGTCAAAGCATTTTTTTTATCCCAAAATCTAGCCAGTCCTATCACAATGACAGATTGGGC
TTGCAAAATCCTAAAAGCTCTCTCCACATCTTTCCTAGCCGCCGCCTGAGCATTATGGAAATCAAGA-TTTTTCTTACCT
TCAG-GTTTCTTCAACGGCTTCACAAATGTTTGCCACTTTGGGTAGATGCCATCTGCAAGATAGTAGCCATAGTTGTATG
TATGACCATTTGCTACAAACTGCACTGGTGGCAGTTCACCATTTGCAATCTTATTCATGAATGGTGACCGATTAACAACG
TTAATGTCATTCAAAGATCCAGATATTCCAAA-AAAAGCATGTCAAATCCAAGTCTCTTGATCGGCCACCTCTTCAAGGA
TTATAGTGGAACCCCTTTTTTGGCCGTGGAATTTCCCATGCCATGCCTTAGGGCAGTTCTTCCAACTCTAATGCATGCAA
TCTATTGAGCCAAGCATACCTGAGAACCCGTGAGTTTTGTTCATCTCCAAAAGCCTTGCGGCGTCTTCAGCATTGGGAGA
TCTCAAATACTCCTGGCCAAACACTTGCACAATTCCGACTGCAAAGCGCTTGACACACATGATGGCTTGACTCTCACCCA
TGGCCAAGTGGTCATCAACTAGAGCAGCCGGAATACCGTATGCCAACATACGCA--
>SNPs
----S-------SSS---S-----------S-------S--S--------S------S--------------------SS
------------S------------S----------------------------SS----------S------S---S--
--SS---S-------S---S-----------S---------------S---------------S-------------S--
----------S-------------------S--S-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------S-----
----SS-SSS----S-SSSSSS-SS-SS-SSSSSS--S-SSSSSSSSSS-SSSSSSSSSSSSSSS-SS------------
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--------------------------------------------------S--------------------S--------
------------------------------------------------------------------SSS---------S-
------------------------------------------------------------S-------------------
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------------------------------------------S-------------------------------------
------S--S--------S------------------------------------SS-SS--------------------
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-------------------------------------------------S------------------------------
--------------------------------------------------S-----------------------------
------------------------S--S----------------------------------------------------
----------S---------------------------S--------------------------S--------------
SSS---------S---------SS---------------------S-----------------------------S----
---------------------S----------------SS------------S---------------------------
------S-----------S--------S----SSS------------S-----------------------------S--
--------------------S-----------S-----------------------------S-----------------
------------------------------------S---------------------S----------------S----
---------------------------------------S-------------------------S--------------
---S-----S-----------S------------------------------SS-----------------------S--
------------------------------S-------S-----------------------------------------
---------------------S----------------------------------------------------------
------------------------------------------------S-------------------------------
---------------------------------S----------S-----------------------------------
--------------------------------------------------------------------------------
----------------------------------------------S---------------------------------
-----------------S-------------------------------------S------------------S-----
----------S----------S------------S--S---------------------------S--S-----------
----------------------------------------------S-----------------S---------------
--S--------------------------------------S--------S-------------S-S-------------
---------------------S----------------------------------
>forward_611
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-------------------------------CAAAGGTGAGGAGAGCAGCA-----------------------------
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>reverse_3302
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---------------------ACCGTGGAATTGTCCTTGCC---------------------------------------
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