>input_sequence_66595
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-----------------------------------------------------------ATGGATAGAGATCCCATGGAG
GCGCCGACGTCTACGAC---GGCTGCGCTGGTTAT---GCCAAAGACAGCGCCGGCGAGCGA------CAAGAAGCTGC-
-----CGTCGCGGTTCAGGCGGGTCTGCGTGTTCTGTGGGAGCAGCGCAGGGAGGAAGGCGGCGTACCAGGCGGCAGCGG
TGCAGCTCGGGCAGCAGCTGGTAGAGCGCGGCATCGACCTCGTGTACGGCGGAGGCAGCGTGGGTCTCATGGGCCTGGTG
TCCCGCGCCGTGCACGGCGGCGGCGGGCGCGTCACGGGCGTGGTGCCCCGGTCGGTTCTGCCGCGGGAGCTGATCGGCGA
GACGCCCGGCGGGGAGGAGGTGAAGGCGGTGTCCGGCATGCACCAGCGCAAGGCTGAGATGGCCCGCCGCGCCGACGCCT
TCGTGGCGCTCCCTGGCGGCCACGGCACGCTGGAGGAGCTGCTGGAGGTCATCACCTGGGCGCAGCTCGGCATCCACGAC
AAGCCGGTTAGTGGCCTCACACCTCACCCTATGAACTCGCAAAGAACATAATTTTCTCTATAGTTTTGTGCAAATTTGTG
ATA-TTTTTGTTGGATTTTGTGATGA---GTTTGATCGAGGTGAATGAATTTTGTTGAACTGCAGGTGGGATTGTTGAAC
GTGGACGGGTACTACGACTCGCTGCTGGCGTTCATCGACAGGGCGGTGGAGGAGGGGTTCGTGGCGCCGGCGGCGCGGAA
GATCATCGTGGCGGCGCCCACGCCCGGTGAGCTGCTCGCCGCGCTGGAGGAGTACGTGCCGGCACACCACGACGCCTCCT
CCGTCAAGCTCAGCTGGGAGTCGTCCGTGGACACCAGGACCTGCTCACCATCCAAGCCAGACATCTCACGCTAG------
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>chr4A_1_TraesCS4A01G317900
CATATAGCTTCAAGGCTAGGAGGAAGAGGTTTGGCCGCCCTTCGGCCAGAGGATTCGGTGGCGCGGCGGCGCTGCAAGCC
GGCTGTCCGCCGGGAGCGCCAAAGCTCAAGCACCATCGATGATTTGCTCTGGAACCGGTCGCAAGAACAGTCTTCATACC
AGTCCCTGTCGACTTGACCACCACCATGGTGACTGCCGTCGGCGAGAGCAAGCGAAGGGGATTCCTGCATACCAGGGGAG
ACATCGAGCTTATTTCCGAGGATTCCAGCGCGCCTGCTTCCAGCAGCAGCGAGCCAACCGCCACCACCAACAAGAGCATC
GCCAGGAACCACCGAACGCGGCTCGGGCGCGCCGACAGCAAAATCCTCATCGGCATGACGCCAATCTCCGGCACTAGGCC
AAACTCCTCTAAGGAAAAACTAGAACTACACCTACTAGATACTATAGAGCACCGCGCACCTCCCCCATCACCTCTCCAAC
CGGCGTCGCCGGCGGCGAAGATCCGGGATCGGGCCGGGCCTGAGCTGCTTTTGTTTTCGCCTCTCCCAAACAGTACCGAG
GAAAGGAGAAGGAACGAGAATTATTCGAATTTACTATTACTTATATTGGTTAACGGACAGCAGAAAAAAAT-AACTAATT
AATCAAGTAGCTCTGTTGTAGTACTAATTCTGAACTAGCTAGCTAGCTACCATAGCCAGAATATTAATCAAATACTAGTG
CTAAGGCAGAGTGAGACAAGACAGGAGATTGCCAAGAATCCTCTCTGGCCACTAGCTACAGCTTAACTACTAATTA---G
CAACAAAAAATTATGTTGGGCTGGCAGGCAGGTTTATTATACCAACATCCAAGCAACT---AGGAGGAGGAAGACGACCA
ACCTAGACCAGCCTATATATACGCACCGCACCTTAGCTACCTTTTGCTTCCCTCCCCTTCCGCCCACCTAGATTCTACCT
GCA-------T-----AGCTAGTACGTGCGCGCAGCTGCCGGCAAAGTCAAGGCGATCGATGGATAGAGATCCCATGGAG
GCGCCGACGTCTACGAC---GGCTGCGCTGGTTAT---GCCAAAGACAGCGCCGGCGAGCGA------CAAGAAGCTGC-
-----CGTCGCGGTTCAGGCGGGTCTGCGTGTTCTGTGGGAGCAGCGCAGGGAGGAAGGCGGCGTACCAGGCGGCAGCGG
TGCAGCTCGGGCAGCAGCTGGTAGAGCGCGGCATCGACCTCGTGTACGGCGGAGGCAGCGTGGGTCTCATGGGCCTGGTG
TCCCGCGCCGTGCACGGCGGCGGCGGGCGCGTCACGGGCGTGGTGCCCCGGTCGGTTCTGCCGCGGGAGCTGATCGGCGA
GACGCCCGGCGGGGAGGAGGTGAAGGCGGTGTCCGGCATGCACCAGCGCAAGGCTGAGATGGCCCGCCGCGCCGACGCCT
TCGTGGCGCTCCCTGGCGGCCACGGCACGCTGGAGGAGCTGCTGGAGGTCATCACCTGGGCGCAGCTCGGCATCCACGAC
AAGCCGGTTAGTGGCCTCACACCTCACCCTATGAACTCGCAAAGAACATAATTTTCTCTATAGTTTTGTGCAAATTTGTG
ATA-TTTTTGTTGGATTTTGTGATGA---GTTTGATCGAGGTGAATGAATTTTGTTGAACTGCAGGTGGGATTGTTGAAC
GTGGACGGGTACTACGACTCGCTGCTGGCGTTCATCGACAGGGCGGTGGAGGAGGGGTTCGTGGCGCCGGCGGCGCGGAA
GATCATCGTGGCGGCGCCCACGCCCGGTGAGCTGCTCGCCGCGCTGGAGGAGTACGTGCCGGCACACCACGACGCCTCCT
CCGTCAAGCTCAGCTGGGAGTCGTCCGTGGACACCAGGACCTGCTCACCATCCAAGCCAGACATCTCACGCTAGCTAGC-
TAGCCTTGCCTTGTA-----------------------------------------------------------------
----------AACTACACAATTAAGATTGACATACATTTA---TATACTACATCAGATGATATATTCATCCAACAAACCG
TACGCGTATTCATACTGATATCATGAACTTTTTGTGGACATAGACTACTTAGTAT---ATTGATCAATTGATGATTACTC
TGTGACTTGTATATGAATGCGTGTGTTCTTGCCTGCTTTGGCTTTTGCTAGTACAGTATGTGGTATCTTTTGTTGCCATT
TCTGGGGATAGATGCTGATTTCCAATTGGGGGTTCTTGGCAACCACACACGTACGTATGTACTCCCTCCGTCCCATAATA
TAATAATATAAAAGCGTTTTTTATATTAGTGTAGTATAAAAAACGTTCTTATATTGTGGAACGGAGGGAGTACAACACAT
TATGTGTTGCATGAATGATTGCATTGCAGAAAGATAGGATCGATGATGGACGTGGCCACCTCCCCAACAGTCGGAAAAGG
TGGATCCATTAGGTCATTCATTCATATCCCTGTCTACCTGCAGTAGCTACAACTTGCAGCTTTAGCCGTGTGACGCCGTG
TGCGTGCATGTGTGTGAGAGGTCAGCAATTCACGCACGTGGATGTACCACACCACCGGGCAGCAAACGGTAGTGGCCGGG
GACCTTCTCTGGGGTTGTGGAAGATAGGATGCAGACAACCAACCAGGTACTGCTCTTCATGTGCTGTCCAGTCCAATCTG
ATCCGATCCAAGTATCCAACCAACACAATAGACAGGCTAGACGTGGAAAGAA-------------TGGCTCACAGTGCTC
ACTCTACTCAAGCCACCCTCACAATTCTTTTTAGCCCCTCCGATCCATATTAATTGTCACCGGTTTAGCACCAAGTTGTT
AATATGGATCATATGGATCGGAGAGAGTATCAGTTATCCATGTATCCTCTCCTAATATTACTATTTTTTGCACTTCAGAC
ACTGAATTATTGGTCTAGGAAACATAATTTTCTCCTGCGAAGATGAGAA
>chr5B_1
CATATAGCTTCAAGGCTAGGAGGAAGAGGTTTGGCCGCCCTTCGGCCAGAGGATTCGGTGGCGCGGCGGCGCTGCAAGCC
GGCTGTCCGCCGGGAGCGCCAAAGCTCAAGCACCATCGATGATTTGCTCTGGAACCGGTCGCAAGAACAGTCTTCATACC
AGTCCCTGTCGACTTGACCACCACCATGGTGACTGCCGTCGGCGAGAGCAAGCGAAGGGGATTCCTGCATACCAGGGGAG
ACATCGAGCTTATTTCCGAGGATTCCAGCGCGCCTGCTTCCAGCAGCAGCGAGCCAACCGCCACCACCAACAAGAGCATC
GCCAGGAACCACCGAACGCGGCTCGGGCGCGCCGACAGCAAAATCCTCATCGGCATGACGCCAATCTCCGGCACTAGGCC
AAACTCCTCTAAGGAAAAACTAGAACTACACCTACTAGATACTATAGAGCACCGCGCACCTCCCCCATCACCTCTCCAAC
CGGCGTCGCCGGCGGCGAAGATCCGGGATCGGGCCGGGCCTGAGCTGCTTTTGTTTTCGCCTCTCCCAAACAGTACCGAG
GAAAGGAGAAGGAACGAGAATTAT--------------------------------------------------------
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>chrUn_1
CATATAGCTTCAAGGCTAGGAGGAAGAGGTTTGGCCGCCCTTCGGCCAGAGGATTCGGTGGCGCGGCGGCGCTGCAAGCC
GGCTGTCCGCCGGGAGCGCCAAAGCTCAAGCACCATCGATGATTTGCTCTGGAACCGGTCGCAAGAACCGTCTTCATACC
AGTCCCTGTCGACTTGACCACCACCATGGTGACTGCCGTCGGCGAGAGCAAGCGAAGGGGATTCCTGCATACCAGGGGAG
ACATCGAGCTTATTTCCAAGGATTCCAGCGCGCCTACTACCAGCAGCAGCGAGCCAACCGCCACCACCAACAAGAGCATC
TCCAGGAACCACCGAACGCGGCTCGGGCGCGCCGGCAGCAAAATCCTCATCGGCATGACGCCAATCTCCGGCACTAGGCC
AAACTCCTC---GGAAAAACTAGAGCTACACGTACTAGATACTATAGAGCACCGCGCACCTCCCCCATCACCTCTCCAAC
CGGCGTCGCCGGCGGCGAAGATCCGGGATCGGGCCGGGCCTGAGCTGCTTTTGTTTTCGCCTCTCCCGAACAGTACCGAG
GAAAGGAGAAGGAACGAGAAT-----------------------------------------------------------
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>chrUn_1
CATATAGCTTCAAGGCTAGGAGGAAGAGGTTTGGCCGCCCTTCGGCCAGAGGATTCGGTGGCGCGGCGGCGCTGCAAGCC
GGCTGTCCGCCGGGAGCGCCAAAGCTCAAGCACCATCGATGATTTGCTCTGGAACCGGTCGCAAGAACCGTCTTCATACC
AGTCCCTGTCGACTTGACCACCACCATGGTGACTGCCATCGGCGAGAGCAAGCGAAGGGGATTCCTGCATACCAGGGGAG
ACATCGAGCTTATTTCCAAGGATTCCAGCGCGCCTACTACCAGCAGCAGCGAGCCAACCGCCACCACCAACAAGAGCATC
TCCAGGAACCACCGAACGCGACTCGGGCGCGCCGGCAGCAAAATCCTCATCGGCATGACGCCAATCTCCGGCACTAGGCT
AAACTCCTC---GGAAAAACTAGAGCTACACCTACTAGATACTATAGAGCACCGCGCACCTCCCCCATCACCTCTCCAAC
CGGCGTCGCCGGCGGCGAAGATCCGGGATCGGGCCGGGCCTGAGCTGCTTTTGTTTTCGCCTCTCCCGAACAGTACCGAG
GAAAGGAGAAGGAACGAGAAT-----------------------------------------------------------
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>chr7B_1
CATATAGCTTCAAGGCTAGGAGGAAGAGGTTTGGCCGCCCTTCGGCCAGAGGATTCGGTGGCGCGGCGGCGCTGCAAGCC
GGCTGTCCGCCGGGAGCGCCAAAGCTCAAGCACCATCGATGATTTGCTCTGGAACCGGTCGCAAGAACCGTCTTCATACC
AGTCCCTGTCGACTTGACCACCACCATGGTGACTGCCATCGGCGAGAGCAAGCGAAGGGGATTCCTGCATACCAGGGGAG
ACATCGAGCTTATTTCCAAGGATTCCAGCGCGCCTACTACCAGCAGCAGCGAGCCAACCGCCACCACCAACAAGAGCATC
TCCAGGAACCACCGAACGCGACTCGGGCGCGCCGGCAGCAAAATCCTCATCGGCATGACGCCAATCTCCGGCACTAGGCT
AAACTCCTC---GGAAAAACTAGAGCTACACCTACTAGATACTATAGAGCACCGCGCACCTCCCCCATCACCTCTCCAAC
CGGCGTCGCCGGCGGCGAAGATCCGGGATCGGGCCGGGCCTGAGCTGCTTTTGTTTTCGCCTCTCCCGAACAGTACCGAG
GAAAGGAGAAGGAACGAGAAT-----------------------------------------------------------
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>chr7B_1
CATATAGCTTCAAGGCTAGGAGGAAGAGGTTTGGCCGCCCTTCGGCTAGAGGATTCGGTGGCGCGGCGGCGCTGCAAGCC
GGCTGTCCGCCGGGAGCTCCAAAGCTCAAGCACCATCGATGATTTGCTCTGGAACCGGTCGCAAGAACCGTCTTCATACC
AGTCCATGTCGACTTGACCACCACCATGGTGACTGCCGTCGGCGAGAGCAAGCGAAGGGGATTCCTGCATACCAGGGGAG
ACATCGAGCTTATTTCCAAGGATTCCAGCGCGCCTACTACCAGCAGCAGCGAGCCAACCGCCACCACCAACAAGAGCATC
TCCAGGAACCACCGAACGCGGCTCGGGCGCGCCGGCAGCAAAATCCTCATCGGCATGACGCCAATCTCCGGCACTAGGCC
AAACTCCTC---GGAAAAACTAGAGCTACACCTACTAGATACTATAGAGCACCGCGCACCTCCCCCATCACCTCTCCAAC
CGGCGTCGCCGGCGGCGAAGATCCGGGATCGGGCCGGGCCTGAGCTGCTTTTGTTTTCGCCTCTCCCGAACAGTACCGAG
GAAAGGAGAAGGAACGAGAAT-----------------------------------------------------------
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>chr7B_1
CATATAGCTTCAAGGCTAGGAGGAAGAGGTTTGGCCGCCCTTTGGCCAGAGGATTCGGTGGCGCGGCGGCGCTGCAAGCC
GGCTGTCCGCCGGGAGCGCCAAAGCTCAAGCACCATCGATGATTTGCTCTGGAACCGGTCGCAAGAGCCGTCTTCATACC
AGTCCCCGTCGACTTGACCACCACCATGGTGACTGCCGTCGGCGAGAGCAAGCGAAGGGGATTCCTGCATACCAGGGAAG
ACATCGAGCTTATTTCCGAGGATTCCAGCGCACCTCCTTCCAACAGCAGCGAGCCAACCGCCACCACCAACAAGAGTATC
GCCAGGAACCACCGAACGCGGCTCGGGCGCGCCGGCAGCAAAATCCTCATCGGCATGACGCCAATCTCCGGCACTAGGCC
AAACTCCTCTAAGGAAAAACTAGAACTACACCTACTAGCTGCTATAGAGCACCGCGCACCTCCCCCATCACCTCTCCAAC
CGGCGTCGCCGGCGGCGAAGATCCGGGATCGGGCCGGGCCCGAGCCGCTTTTGTTTTCGCCTTCTC--------------
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>chr7B_1
CATATAGCTTCAAGGCTAGGAGGAAGAGGTTTGGCCGCCCTTTGGCCAGAGGATTCGGTGGCGCGGCGGCGCTGCAAGCC
GGCTGTCCGCCGGGAGCGCCAAAGCTCAAGCACCATCGATGATTTGCTCTGGAACCGGTCGCAAGAGCCGTCTTCATACC
AGTCCCCGTCGACTTGACCACCACCATGGTGACTGCCGTCGGCGAGAGCAAGCGAAGGGGATTCCTGCATACCAGGGAAG
ACATCGAGCTTATTTCCGAGGATTCCAGCGCACCTCCTTCCAACAGCAGCGAGCCAACCGCCACCACCAACAAGAGTATC
GCCAGGAACCACCGAACGCGGCTCGGGCGCGCCGGCAGCAAAATCCTCATCGGCATGACGCCAATCTCCGGCACTAGGCC
AAACTCCTCTAAGGAAAAACTAGAACTACACCTACTAGCTGCTATAGAGCACCGCGCACCTCCCCCATCACCTCTCCAAC
CGGCGTCGCCGGCGGCGAAGATCCGGGATCGGGCCGGGCCCGAGCCGCTTTTGTTTTCGCCTTCTC--------------
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>chr3B_1
CATATAGCTTCAAGGCTACGAGGAAGAGGTTTGGCCGCCCTTCGGCCACAGGATTCGGTGGCACGGCGGCGCTGCAAGCC
GGCTGTCCGCCGGGGGCGCCAAAGCTCAAGCACCATCGATGATTTGCTCTGGAACCGGTCGCAAGAACCATCTTCATACC
AGTCCCCGTCGACTTGACCACCACCATGGTGACTGCCGTCGGCGAGAGCAAGCGAAGGGGATTCCTGCATACCAGGGGAG
ACATCGAGCTTATTTCCGAGGATTCTAGCGCGCCTACTTCCAGCAGCAGCGAGCCAACCGCCACCACCAACAAGAGCATC
GCCAGGAACCACCGAACGCGGCTCAGGCGCGCCGGCAGCAAAATCCTCATCAGCATGACGCCAATCTCCAGCACTAGGCC
AAACTCCTCTAAGGAAAAACTAGAACTGCACATACTAGATACTATAGAGG--------CCTCCCCCATCACCTCTCCAAC
CGGCATCGCCGGCGGTGAAGATCCGGGATCGGGCCGGCCCCGAGCCGCTTTTGTTTTCGCCTCTCCCAAACAGAACCGAG
GAAAGGAGAAGGAACGAGAA------------------------------------------------------------
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>chr5D_589
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----------------------------ATTTACTATTACTTATATTGATTAATGGACAGCAG-AAAAAAT-AACTAATT
TATCAAGTAG-TC---TGTCGTACTAATTCTGAACTAGCTAGCTGGCTAC-TTAGCAAGGAGATTAATCAAATACTAGTG
CTAAGGCAGAGAGAGACAAGAGAGGAGATTGCCAAGAATCCTCTCTGGCCACTAGCTACAGCT-------TAACTA---G
CAACAAAAAATTAAGTTGGGCTGGCAGGTAGGCTTATTATACCAACATCCAAGCAGCTAGGAGGAGGAGGAAGACGACCA
AGCTAGACCAGCCTATATATATGCACCGCACCTTAGCTACCTTTTGCTTCCCTTCCCTTCCGCCCACCTAGATTCTACCT
GCA-------TCAAGCAGCTAGTACGTGCGCGCAGCTGCCGGCACAGTCAAGGCGATCGATGGATAGAGATCCCATGGAG
GCACCGACGTCTACGAC---GGGGGCGCTGGCTAT---GCCAACGCTGGCGCCGGCGGGCAA------CAACAGCGGCAA
GAAGGCGTCGCGGTTCAGGCGGGTATGCGTGTTCTGTGGGAGCAGCGCAGGGAGGAAGGCGGCGTACCAGGCGGCAGCGG
TGCAGCTCGGGCAGCAGCTGGTGGAGCGCGGCATCGACCTCGTGTACGGCGGCGGCAGCGTGGGTCTCATGGGCCTGGTG
TCCCGCGCCGTGCACGGCGGCGGCGGGCGCGTCACGGGCGTGGTGCCTCGGTCGGTTCTCCCGCTGGAGCTGATCGGCGA
GACGCCCGGCGGGGAGGAGGTGAAGGCGGTGTCGGGCATGCACCAGCGCAAGGCCGAGATGGCCCGCCGCGCCGACGCCT
TCGTCGCGCTCCCCGGCGGCTACGGCACGCTGGAGGAGCTGCTTGAGGTCATCACCTGGGCGCAGCTCGGCATCCACGAC
AAGCCGGTTAGT-------CACCTCACCCTATGAACTCGCAAAGAACATATTTTTCTGTATAGTTTCGTGCAAAATTGTG
ATG-ATTTTGTTGGCTTTCGTGATGA---GTTTGATCGAGGTGAATGAATTTTG-TGAACTGTAGGTGGGATTGTTAAAC
GTGGACGGGTACTACGACTCGCTGCTGGCGTTCATCGACAGGGCGGTGGAGGAGGGGTTCGTGGCGCCGGCGGCGCGGCA
CATCATCGTGGCGGCGCCCACGCCCAGTGAGCTGCTCGCCGCGCTGGAGGAGTACGTGCCG-CACACCACGACGCCTCCT
CCGTCAAGCTCAGCTGGGAGTCGTCCGTGGACACCATGACCTGCTTACCATCCAAGCCCGATATCTCTCGCTAGCTAGC-
TAGCCTGGCTTGTA----------------------------------------------TACTAGCCTAGGATGGAGCT
A--CCTGCTCAACTACACAATTAAGATTGACATACATTTA---TA-----CATCAGATGATATATTCATCCAACCAACCG
TACGCGTATTCATACTGATATCATGAACTTTTTGTAGACATAGACTACTTGGTAT---ATTGATCAATTGATGATTACTC
TGTGACTTGTATATGAAT--GTGTGTTCTTGCCTGCTTTGGCTAGCTTGTGCT-AGTATGTGGTATCTTTTGTTCCCATT
TCTGGGG-GAGATGCTGATTCCCATTCGGGGGTTCTTGGCAACCACACACGTACGTATGTACT-----------------
-----------------------------------------------------------------------ACAACACAT
TATGTG------------TTGCATTGCAAAAAGGTA-GATCGATGATGGATGTGGCCACCTCCCCAACAGTCGGAAAAGG
TGGATCCATTCAGTCATTCATTCATATCCCTGTCTACCTGCAGTAGCTACAACTTGCAGCTTTACCCGTGTGGCGCCGTG
TGCATGCATGTGTGTGAGAGGTCAGCAATTCACGCACGTGGATG-----CACCACCGGGCAGCAAACGGTAGTGGCCGGG
GACCTTCTCTGGGGTTGTGGAAGATAGGATGCAGCCAACCAACCAGGTACTGCTGTTCATGTGCTGTCCAGTCAAATCTG
ATCCAATCCAAGTATCCAACCAACACA-------GGCCAGACGTGGAAAGAAACCAAAGAATGCATGGCTCACAATGCTC
ACTCTACTCAAGTCACCCTCACAATTCTTCTTAGACTCCTC---------------------------------------
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>chr5B_589
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----------------------------ATTAACTATTACTTATATTGATTAATGGACAACAG-AAAAAATTAACTAATT
AATCAAGTAGCTC---TGTTGTACTAATTCTAAACCAGCTAGCTAGCTACCTTAGCCAGGAGATTAATCAAATACTAGTG
CTAAGGCAGAGAGAGACAAGAGAGGAGATTGCCAAGAATCCTCTCTGGCCACTAGCTACAGCT-------TAACTAATAG
CAACAAAAAATTAAGTTGGGCTGGCAGGCAGGTTTATTATACCAACATCCAAGCAGCTAGGAGGAGGAGGAAGACGACCA
AGCTAGACCAGCCTATATATACGCACCGCACCTTAGCTACCCTTTGCTTCCCTTCCCTTCCGCCTACCTAGATTCTACCT
GCATCAAGCTTCAAGCAGCTAGTACGTGCGCTTG--TGCCGGCACAGTCAAGGCGATCAATGGATAGAGATTCCATGGAG
GCGCCGACGTCTACGAC---GGCTGCGCTGGCTAT---GCCAAAGCCAGCGCCGGCGAGCAG------CAACAACGACAA
GAAGGCGTCGCGGTTCAGGCGGGTATGCGTGTTCTGTGGAAGCAGCGCGGGGAGGAAGGCGGCGTACCAGTCGGCGGCGG
TGCAGCTCGGGCAGCAGCTGGTGGAGCGCGGCATCGACCTCGTGTACGGCGGCGGCAGCGTGGGCCTGATGGGCCTGGTT
TCCCGCGCTGTGCACGGCGGCGGCGGGCGCGTCACGGGCGTAGTGCCTCGGTCGGTTCTCCCGCGGGAGCTGATCGGCGA
GACGCCCGGCGGGGAGGAGGTGAAGGCGGTGTCGGGCATGCACCAGCGCAAGGCCGAGATGGCCCACCGCGCCGACGCCT
TCGTCGCGCTCCCCGGCGGCTACGGCACGCTGGAGGAGCTGCTGGAGGTCATCACCTGGGCGCAGCTCGGCATCCACGAC
AAGCCGGTTAGTGACCTCG---CTCACCCTATGAACTCGCAAAGAACATATTTTTCTACACAG-TTCATACAAATTTGGG
ATGAATTTGGTTAGATTTTGTGATGTCTCGTTTGATTGAGATGGATTTTG--TG-TGAACTTTAGGTGGGATTGCTGAAC
GTGGACGGGTACTATGACTTGCTGCTGGCGTTCATCGACAGGGCGGTGGAGGAGGGGTTCGTGGCACCGGCGGCGCGGCA
CATCATCGTGGCGGCGCCCACACCCGGTGAGCTGCTAGCCGCGCTGGAGGAGTACGTGCCGGCGCACCACGACGCCTCCT
CCGTGAAGCTCAGCTGGGAGTCGTCCGTGGACACCAGGACCTGCTCACCACCCAAGCCAGACATGTCACGCTAGCTAGCC
TAGCCTAGCCTTGTAGTGCTGGTAGTATATATTTCTTTTCTTTTATTCATGAAGTAGAAGTACTAGTCTAGGAAAGGAGC
TACCCTCCTCAACTACCCAATTAAGATTGACATATACATATACTA-----CATCAGATTATATATTCATCCAACCAGACA
TACGCGTATACATACTGATATCATGAAGTTTTTGTAAGTATAGCCACTTAGTATATTGATTGATCAATTGATGATTACTC
TGTGACTTGTATATGAATGTGTGTGTTCTTGCCTGCTTTGGC----TTGTGCT-AGTATGTGGTATCTTTTGTTCCCATT
TCTGGGGAGAGATGGTGATTTGCATTTGGGGGTTCATGGCATCCACATGTATGTTC------------------------
--------------------------------------------------------------------------------
-ATCTGTTGCATGAATGATTGCATCGCCAAAAGATA-GATCGATGATGGATGTGGCCAGCTCCCCAACAGTCGGAAAAGG
TGGATCCATTCAGTCATTCATTCATATCCCTGTCTACCTGCAGTAGCTACAACTTGCAGCTTTAGCCGTGTG--------
--CGTGCATGTGTGTGAGAGGTCAGCAATTCACGCACGTGGATG-----CACCACCGGGCAGATAACGGTAGTGGCCGGG
GATCTTCTCTGGGGTTGAGGAAGATAGGATGCAGCCAACCAACCAGGTACTGCTGTTCATGTGCTGTCCAGTCCAATCTT
ATCTAATCCAAGTATCCAACCAACAC--------------ACGTGGAAAGAAACCAAAGAATGGCT------CAATGCTC
ACTCTACTCAAGTCACCCTCACAATTCTTCTTA-----------------------------------------------
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>chr4A_1018
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----------------------------------------------------------------------------GGAG
GCGCCGACGTCCACGACCACGGTGGCGCTGGCCACGTCGCCCAAGCCTGCGCCGTCGAGCAACGGCAGCAAGAAGCTGC-
-----CGTCGCGGTTCCGGCGGGTGTGCGTGTTCTGCGGGAGCAGCCCGGGGAGGAAGCCGGCGTACCAGCTGGCCGCCG
TGCAGCTCGGGCAGCAGCTGGTGGAGCGCGGCATCGACCTCGTGTACGGCGGCGGCAGCGTCGGGCTCATGGGCCTGGTG
TCCCGCGCGGTGCACGGCGGCGGCGGGCGCGTCACGGGCGTGGTGCCCCGGTCGGTCCTCCCGCGGGAGCTCATCGGCGA
GACGCCCGGCGGGGAGGAGGTGAAGGCCGTGTCCGGCATGCACCAGCGCAAGGCCGAGATGGCCCGCCGCGCCGACGCCT
TCGTGGCGCTCCCCGGCGGCTATGGCACGCTGGAGGAGCTGCTGGAGGTCATCACCTGGGCGCAGCTCGGCATCCACGAC
AAGCCGGTGGGCC-------------------------------------------------------------------
------------------------------------------------------------------------TGCTGAAC
GTGGAGGGCTACTACGACTCGCTGCTGGACTTCATCGACAGGGCGGTGGACGAGGGGTTCGTGTCGCCGGCGGCAAGGCG
CATCATCGTGGCCGCGCCCACGCCCGGCGAGCTGCTGGCGGCGCTGGAGGACTACTCGCCGGCGCACCACGACGGCGGAG
GCGTGAAGCTCAGCTGGGAGTCGTCCGTGGACACCATGGCCTGCTCGCCGCCCAAGCCGGACATCTCCCGCTAGC-----
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>chr5D_1018
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----------------------------------------------------------------------------GGAG
GCGCCGACGTCGACGCCCACGGTGGCGCTGGCCACGTCGCCCAAGCCGGCGCCGGCGAGCAACGGCCGCAAGAAGCTGC-
-----CGTCGCGGTTCCGGCGGGTGTGCGTGTTCTGCGGGAGCAGCCCGGGGAGGAAGCCGGCGTACCAGCTGGCCGCCG
TGCAGCTCGGGCAGCAGCTGGTGGAGCGCGGCATCGACCTCGTGTACGGCGGCGGCAGCGTGGGGCTCATGGGCCTGGTG
TCCCGCGCCGTGCACGGCGGCGGCGGGCGCGTCACGGGCGTCGTGCCGCGGTCGGTCCTCCCGCGGGAGCTCATCGGCGA
GACGCCCGGCGGCGAGGAGGTGAAGGCCGTGTCCGGCATGCACCAGCGCAAGGCCGAGATGGCCCGCCGCGCCGACGCCT
TCGTGGCGCTCCCCGGCGGCTACGGCACGCTGGAGGAGCTGCTGGAGGTGATCACCTGGGCGCAGCTCGGCATCCACGAC
AAGCCCGTGGGCC-------------------------------------------------------------------
------------------------------------------------------------------------TGCTGAAC
GTGGAGGGGTACTACGACTCGCTGCTGGACTTCATCGACAGGGCGGTGGACGAGGGGTTCGTGTCGCCGGCGGCAAGGCG
CATCATCGTGGCGGCGCCCACGCCCGCCGAGCTGCTGGCGGCGCTGGAGGAGTACGCGCCGGCGCACCACGACGCATCCG
CCATCAAGCTCAGCTGGGAGTCGTCCGTGGACACCATGGCGTGCTCGCCGCCCAGGCCGGACATCTCGCGCTAGC-----
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>SNPs
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------------------------SSSS--------------------S----S---------S----------------
-------------SSS---S-------------------------------S-------S-S------------------
-----------S---------S-----------------------------------------SSSSSSS---S------
-------------S-----------------------------------------S------------------------
-S---------------------------------------------------S--------------------------
--------------------------------------------S-----------------------------------
-------------------------------S-------------S--------------S-------------------
------------------------S-------------------------------------------------------
----------------------S-----------------------------S---------------------------
-----------------------------------------------------------S--------------------
------------------------------------------------------S-------------------------
-------------S------S-----------------------------------------------------------
-------------S----S-------------------------------S------S--------S-------------
--S-S-------------------------------------------------S-------S-----------------
------------------------------------------------------------------------------S-
S-------------------------------------------------------------------------------
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------S-------------------------------------------------------------------------
---------------------------------------------SSSSS------------------------S-----
-----------------------------------S--------------S-----------------------------
-------------------S-----------------------SSSSSSS-SSS--------------------S-----
--------S---------------S--------------------------------------SSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------
----------------------------S-------S-------------S-----------------------------
----------SS------------------------------------------------------------S-------
--------------------------------------------SSSSS-------------------------------
----------------------------------S-------------------S-------------------------
----S----------------------SSSSSSS---S------------------------------------S-----
------------S----------------S----S-S-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_882
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------GGAGGAGGAAGACGACCA
AC------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>reverse_2375
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------TGTGGAACGGAGGGAGTACA------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
