>input_sequence_66541
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-------------------------------------------------------------ATGGGCGGTGCCGTGAAGG
TGTACGGGGTGGCGGCGTCTCCGTTCGTCGCGACGGTGCTGCTGTGCCTGGAGGAGGTCGGCGCCGACTACGAGCTCCTC
CCCCTCGACATGGCTGCGCGGGAGCAGAGGACCGAGCCCTACCTCTCTCGGAACGTATGTAGAAAGAGAGACA-------
------------------------------------------------GTTTATAATTTGATTTGAGTATGTTTCTATCT
CGCTCCATTTTCGTATGCAAG--TTTTCA-TACGATTCAATCTCGCAGCCTTTCGGCAAGATCCCGGCGTTGGAGGACGG
GGAGCTGACTATATTCGGTA-TGAAATTCACATACTCGCTCACGAACCAATTCATAGCAGCA------------------
---TACAAACTGTAATTAGA-TTTT------------CAATTGATCCACACACTGGTGATAT--TACCTCAGAATCGCGC
GCGATTTCTCGGTACGTGCTCCGCAAGTACGG------AGGCACCGGCG---CCACCGATCTCCTACGGGCATCCAGCCT
CGAGGAATCGGCCATGGTGGACGTGTGGATGGAGGTGGAGGCCCACCAGTACCAGCCGGCCATAGCCAACATCGTCCGGC
AGTGCGTCATCCTGCCGTTCATCGGCGGCGCGCGAGACCAGGCCGTCGTCGACGAGTACGTCGGGAAGCTGGAGAAGGTC
CTCGACGTGTACGAGGCGCGGCTGTCCAGCTCGCCGTACCTCGCCGGGGACTTCTTCAGCCTCGCCGACCTCGTCCACTT
CGGCTTCGCCTACTGCCTCGTGGCCGGCACCGAGTACGCGACGCTGCTGGAATCGCGCGCGAGCGTCATGGCGTGGTGGG
GGCGGATCATGACCAGGCCGGCGGTGAGGAAGGTGGCGCCGCTAATCCACCTCGGACTGAAGCTATCTTCGCCAGCATAA
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>chr1A_1_TraesCS1A01G103000
ATCTAACTCTGCCAACATCTTGGAGAGCTTCACTGTATACGAAGTCACAATTCCTTGGGTAGGAAGGAAGCTCGAATTAT
TGAACAAGTCAATCAAGAACAAAAGGAAAATATCACTAGGTACTAGGTAGAAGACCATAACCACACCAAATCTTCCCGGC
GACCAGATCACGAGAAGAGTATACTAGTCTATTACTCCGGCCATACCATAATATAAAAACGTCTTTTATACTAGTGTAGT
GTATAAAAAAGGGACACGTTGTTTTGGTGTTTGGGTTCAGAGAGCCCGTGTTAGATACAAGATGCTCAAATGCTTAATGG
TCGTGCAAAATTTTATGAAGTTTGGGCATCCGAGGAGCTCATGGCAAAAAAATAAAATTCTGGCAGGTCGGGAACATTTT
AAAACAGTGATGTGCATGTCCTAATTTATCTTTTTTTTATCATGCACTTCTCAAATGTCCAAACTTCATCAAATTTTGCA
CGAACATCACACACATGCACATCTTACTTGCAAAAAAAATTATTTATTTTTTTCCTATTATTAATCATTTTACTGTTTAT
TGAGAAAATGGATATTCGATGAAGAACATTGTTATATTATGGGACGGAGGAAGTACCATTTGGAGTGAGAAAGCAAATCC
CATAAAGGACCACTATTTGGATATATTATCGTATGAATTTAATTATGGACAAAGTCACAATTCCTTGGGCAGGGAGGAAG
CTCGATTCATCAACCAATTCAAGGACAAAAGGAAATTATCACTCGGTTGACCATAACCACACCAAATCTTCCCAAGACCA
GATCAC---GAAAATTGTATAGTACCGTCTACACTATTTGGTTATATTATCTTCCTCTCAATCACTCCCATCACATGTAC
TATAAGTTATGCTGGTCAAGGTCTGCTTAAGCACGCACTAATTA------------AAAAACAGAGCTGCTTAATTACAG
CTCTGT------GTGTGAGAGAAAGAGGGAAGCTGCGTGGGTGAGTGAGAGGGAGAGAGAGATGGGCGGTGCCGTGAAGG
TGTACGGGGTGGCGGCGTCTCCGTTCGTCGCGACGGTGCTGCTGTGCCTGGAGGAGGTCGGCGCCGACTACGAGCTCCTC
CCCCTCGACATGGCTGCGCGGGAGCAGAGGACCGAGCCCTACCTCTCTCGGAACGTATGTAGAAAGAGAGACA-------
------------------------------------------------GTTTATAATTTGATTTGAGTATGTTTCTATCT
CGCTCCATTTTCGTATGCAAG--TTTTCA-TACGATTCAATCTCGCAGCCTTTCGGCAAGATCCCGGCGTTGGAGGACGG
GGAGCTGACTATATTCGGTA-TGAAATTCACATACTCGCTCACGAACCAATTCATAGCAGCA------------------
---TACAAACTGTAATTAGA-TTTT------------CAATTGATCCACACACTGGTGATAT--TACCTCAGAATCGCGC
GCGATTTCTCGGTACGTGCTCCGCAAGTACGG------AGGCACCGGCG---CCACCGATCTCCTACGGGCATCCAGCCT
CGAGGAATCGGCCATGGTGGACGTGTGGATGGAGGTGGAGGCCCACCAGTACCAGCCGGCCATAGCCAACATCGTCCGGC
AGTGCGTCATCCTGCCGTTCATCGGCGGCGCGCGAGACCAGGCCGTCGTCGACGAGTACGTCGGGAAGCTGGAGAAGGTC
CTCGACGTGTACGAGGCGCGGCTGTCCAGCTCGCCGTACCTCGCCGGGGACTTCTTCAGCCTCGCCGACCTCGTCCACTT
CGGCTTCGCCTACTGCCTCGTGGCCGGCACCGAGTACGCGACGCTGCTGGAATCGCGCGCGAGCGTCATGGCGTGGTGGG
GGCGGATCATGACCAGGCCGGCGGTGAGGAAGGTGGCGCCGCTAATCCACCTCGGACTGAAGCTATCTTCGCCAGCATAA
GTTGAATACCGTGAATTCAGTTTATATATGTATTTCAATTGGGTTTTATTA------TTTTTCATGTCTAGGGACACGTT
GAGAAATAAATGTTTGTTCATATATATAAGTAGTACTTCCTACGGAAAAAACATAAAAACATTTAGATCACTATTTTAAT
AATATAAAGGCTTTTATATTTCTTTATGGAGAGAGTGCTACATATAAATAAGACTAGCAAAAAAAGTGAGGTGCACTAAA
CTCATCATCGAGTCTGACAGTATAATGGCGTTGGAGGCTATCTCTCATCCCAATGCTTATATTCGAACTGATGTTTCAAT
CATTACAAGCCATGGAGTT-GCTAGTATCAGTCTTGTCCAC--TAGCAGAGAAGCAAATATTGCCGAAAAAGAATTTCCT
CCACGTTTTATATTATAAATCAAACATCACCACATA--TCTTAGCGAGCTGAATAAACACACACCATCATGACACACATC
GAACACATCCAAGTCTAGATACAAAGGTGCCGAGCACCATCACATCACTCGGACACAACCAAGCAAACATAATATGAGCT
ACGACGAACCACTTGGAGCCACCGAGGGGGTGAGATGGAC-ATGACGAAGCAAGGACTCCAAGACGGTGCCTCCCAGAAG
GGCACGACCACGGATAGCCGCCACCGTCCGATCCGCAGATCAAGTTTTCACCCGGAGCAACGCAGGGGGTGGGAGCACCA
CGACGGAACCTTCAAGAAGGATACGACGTCCACGGACGCCGCCACCGACGGCCAGAAACTGGGCAAGTGATGAACCCCGG
TGCTTGCACCCCGCCGACACACCCTTGCTCCGCCAACCACCCACAGCCACGTCCCCCCGCAAAACCATGGCTGCCCGCCC
GCACCTGGGACGCAGGTTCAGCCCACGAACGCCACGCCTCCCGTCGCCAGGGCCGCCGCCCAACATCTATACACCCCCAA
AACCATCCAAAGAGATCAACTTTGCGCCAAAAGAACACCACTGACCGACGAA
>chr1D_679
TTATAT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------TATGGACAAAGTCGTAATTCCTTGGGCGTGAAGGAAG
CTCGATTCATGAATCAAGTCAAAGACAATAAGAAATTATCACTTGGTTGACCATAACCACACCAAATCTTGTTGAGATCA
GATCAC---AAAAATGGTATAGTAGAGTCTGTACTATTTTCTGGTATTATCTTCCTTGCAATCACGCCGATCACATGTAA
TATAAGTCGGGTTGGTCAAGGTCTGCTTAAGCATGCACTAATCAGCACTAAAAAGTAAAAACAGAGCTGCTTAATTGAAG
CTCTCTCTCTCTGTGTGTATC--AGAGAGAAGCTGTGTGGGTGTGTGAGAGGGAGAGAGAGATGGGCGGTGCCGTGAAGG
TGTACGGGGTGGCGGCGTCGCCGTTCGTCGCGACGGTGCTGCTGTGCCTGGAGGAGGTCGGCGCCGACTACGAGCTCCTC
CCCCTCGACATGGCTGCGCGGGAGCAGAGGACCGAGCCCTACCTCTCTCGGAACGTATGTAGAAACAGAGACA-------
------------------------------------------------GTTTATACTTTGA-TTGAGTATGTTTCTATCT
CGCTCCATTTTTTTATGCAAG--TCTTCA-TACGGTTCAATCTCGCAGCCTTTCGGCAAGATCCCAGCGTTGGAGGACGG
GGAGCTGACTCTCTTCGGTAATGAAATTCACACACTGA-TCACGAATCAATCCAT---AGCA------------------
---TACAAACTCTGATTAGA-TTTT------------CAATTGATCCACACACCGGTAATAT--GATCTCAGAATCGCGC
GCGATTTCTCGGTACGTGCTCCGCAAGTTCGG------AGGCGCCAGCG---CCACCGATCTTCTAGGAGAATCCAGCCT
CGAGGAATCAGCCATGGTGGACGTGTGGATGGAGGTGGAGGCCCACCAGTACCAGCCGGCCATCGCCAACGTCGTCCGGC
AGTGCATCATCCTGCCGTTCATCGGCGGCGCGCGCGACCAGGCCGTCGTCGACGAGTACGTCGGGAAGCTGGAGAAGGTC
CTCAACGTGTACGAGGCGCGGCTGTCGAGCTCACCGTACCTCGCCGGGGACTTCTTCAGCCTCGCCGACCTCGTCCACTT
CGGCTTCACCTACTGCCTGGTGGCCGGCACCGAGTACGGGGCTCTGCTGGAGTCGCGCGCGAGCGTCCTGGCGTGGTGGG
GGCGGATCATGACCAGACCCTCGGTGAAGAAGGTGGCGCCGCTAATCCACCTCGGACTGAAGCTATCTTCGTCAGCTTAA
ATTGAATATCGTACATTCAGTTTATATATGCATTTCAGTTGGGTTTTACTACTATTATTTTTCATGTCTAG-GACACGTT
GAGAAATAAATGTGTGTTCC------TAAGTAGTACTCCCTATTTAAAGAAAAAT-------------------------
-ATATAAACGCTTTTATATTTTTTTGTGGAGGAAGTACTACATATAAATAAGACCAGCGAAAAAAATGAGGTGCACTAAA
CTCATCGTCGAGTCTGGCAGTATGATGGCGTTGGATGCTATCTCTCATCCAAATGCTTA-ATTCGGACTGATGTTTCAAT
CATTACAAGCCATGGAGTTTGCTAGCATCTGTCTTGTCCACTATAGCAGAGAAGCAAAT---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>chr1B_684
--------------------------------------------------------------------------------
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-------------------------------------------TATGGACAAAGTCGTAATTCCTTGGGCGTGAAGGAAG
CTCGATTCATGAATCAAGTCAAAGACAATAAGAAACTATCACTTGGTTGACCATAAGCACACCAAATCTTGCTGAGATCA
GATCAAGCAAATACTAGTACAGTACCGTCTACACTATCTGGTTATAATATCTTCCTTGCAATCACTCCCATCACAAGTAT
A--AAGTTGGGTTGGTCAAGGTCTGCTTAAGCACGCACAAATCAGCAC-------TAAAAACAGAGCTGCTTAATTACAG
CTCTCT------GTGTGTGTC--AGAGAGAAGCTGTGTGGGTGTGTGAGAGGGAGGGAGAGATGGGCGGTGCCGTGAAGG
TGTACGGGGTGGCGGCGTCTCCGTTCGTCGCGACGGTGCTGCTTTGCCTGGAGGAGGTCGGCGCCGACTACGAGCTCCTC
CCCCTCGACATGGCTGCGCGGGAACAGAGGACCGAGCCACACCTCTCTCGGAACGTATTCAGAAACAGAGATA-------
------------------------------------------------GTTTATACTTTGA-T----TATGTTTCTATCT
CGCTCCATTTTCTTATGCAAG--TCTTC-GTATGGTTCAATCTCGCAGCCATTCGGCAAGATCCCAGCGTTGGAGGACGG
GGAGTTGACTCTCTTCGGTA-TGAAATTCACACACCCA-TCAAGAATCAATTCAT---AGCA------------------
---TACAAACTATGATTAGA-TTTT------------CAATTGATCCACACATCGGTAATAT--GATCTCAGAATCGCGC
GCGATTTCTCGGTACGTGCTCCGCAAGTACGG------AGGCACCAGCG---CCACCGATCTTCTAAGGGCATCCAGCCT
AGAAGAATCAGCCATGGTGGACGTGTGGATGGAGGTGGAGGCCCACCAGTACCAGCCGGCCATCGCCAACGTCGTCCGGC
AGTGCGTCATCCTGCCGTTCATCGGCGGCGCGCGAGACCAGGCCGTCGTCGAGGAGTACGTCGGGAAGCTCGAGAAGGTC
CTCGACGTGTACGAGGCGCGGCTGTCGAGCTCGCCGTACCTCGCCGGGGACTTCTTCAGCCTCGCCGACCTCGTCCACTT
CGGCTTCACCTACTGCCTGGTGGCCGGCACCGAGTACGCGACGCTGCTGGAGTCGCGCGCGAGCGTCATGGCGTGGTGGG
GGCGCATCATGGCCAGGCCCTCGGTGAAGAAAGTGGCCCCGCTCATCCACCTCGGATTGAAGCTATCCTCGTCTGCTTAA
ATTGAATGTCGCAAATTCAGTTTATATATGCATTTCAGTTGGGTTTTACTACTATGATTTTTGATGTCTAGAGACATGTT
GAGAAATAAATGTTTGTTCG------TAAGTAGTACTTCCTACGTAAAAAAATATATATAAGCGTATGGATCAC-TTAGT
GATCTAAACGCTCGTATATTTCTTTGTGGAAGGAGTACTACATATAAATAAGACTAGAAGGAAAAATGAGATGCACTAAA
CTCATCATCGAATCTGATGGTATGATGGCGCTGGAGGCTACCTATCAT-CCAATGCTTATATTCGGACTGATGTTTCACT
CATTACAAGTCATGGAGTT-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>chr1B_982
GAGAGAGAGA----------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------GAGAGAGAGATGGGCGGTGCCGTGAAGG
TGTACGGGGTGGGGGCGTCTCCGTTCGTGGCGACGGTGCTGTTGTGCCTGGAGGAGACGGGCGCAGACTACGAGCTCGTC
CCCCTCGACATGGCGGCGCGTGAGCAGAGGACCGAGCCCCACCTCTCCCGAAACGTACGTCGGTTCTGCTGAGCTCTACC
ATCAACCACAGCACTCCACCTTCTACTTTTT-------CGTGACAAGTGTTATTACTCAGG-TGCTCTAATTTTCTATCT
CATTCCAT---------------TTTCTTGTATGCTTCAATCTTGCAGCCTTTCGGGAAGATCCCAGTGTTAGAGGACGG
AGAGCTGACTCTCTTCGGTA-TGAAATTCTCACGCTCA-TCACAAATCAGACCAT---AGCATCTTAATCAAAACCTCAC
TTTTACAAACGATGATTAGA-TTTTCTTTTGCCCTATCAATTAATCCGCACGTCGGTAATAC--GATCTCAGAATCGCGC
GCGATTTCTCGGTACGTGCTCCGCGAGTACGG------AGGCACCAGCG---CGACCGATCTTCCAAGGGAATCCAGCCT
CGAAGAATCAGCCATGGTGGACGTGTGGACGGAGGTGGAGGCCCACCAGTACCAGCCGGCCATCGAACACATCGTCCAGC
AGTGCGTCATCCTGCCGTTCATCGGCGGCGCGCGCGACCAGGCCGTCGTCGACGAGAACGTCGGCAAGCTGGAGAAGGTC
CTCGACGTGTATGAGGCGCGGCTGTCGACGCACGCGTACCTTGCCGGAGACTTCTTCAGCCTCGCCGACCTCCTCCACTT
CGGTATCACCTACTACCTGGTGGCCGGCATCGAGTACGCGACGCTGCTGGAGTCGCGCGCGAACGTCAGTGCGTGGTGGG
GGCGGATCATGGCCAGGCCGTCGGTGAAGAAGGTGGCGCCGTTAATCCACCTCTGGTTGAAGCCGTCTTCG---------
--------------------------------------------------------------------------------
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----------------------------------------------------
>chr1D_982
GAGAGAGAGA----------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------GAGAGAGAGATGGGCGGTGCCGTGAAGG
TGTACGGGGTGGGGGCGTCTCCGTTCGTGGCGACGGTGCTGTTGTGCCTGGAGGAGACGGGCGCAGACTACGAGCTCGTC
CCCCTCGACATGGCGGCGCGAGAGCAGAGGACTGAGCACCACCTCTCCCGAAACGTACGTTGGTTCTCCTGAGCTCAACC
ATCAACCACAGCACCCTACCTTCTTAATCCCATTTTCCCGTGAGAAGTGTTATTAGTCAGG-CGCTCTAATCTTCTATCT
CATTCCATTTTCTTATGTAAG--TTTCTTGTATGCTTCAATCTTGCAGCCTTTCGGCAAGATCCCAGTGTTGGAGGACGG
AGAGCTGACACTCTTCGGTA-TGATATTCACACGCTCA-GCACAAATCAGACCAT---AGCATCAAGT------------
------AAACGATGATTAAA-TTTTCTTTTGCCTTATCGATTAATCCGCACACCGGTAATATATGATCTCAGAATCGCGC
GCGATTTCTCGGTACGTGCTCCGCAAGTACGCATCGCCAGGAACCAAGG---CCACCGATCTCCTAGGAGAATCCAGCGT
CGAGGAATCAGCCATGGTGGACGTGTGGACGGAGGTGGAGGCCCACCAGTACCAGCCGGCCATCGAACACATCGTCCAGC
AGTGCGTCATCCTGCCGTTCATCGGCGGCTCGCGAGACCAGGTCGTCGTCGACGAGAGCGTCGGGAAGCTGGAGAAGGTC
CTCGACGTGTACGAGGCGCGGCTGTGGACGCACGCATACCTCGCTGGAGATTTCTTCAGCCTCGCCGACCTCGTCCACTT
CGGTATTACCTACTACCTGGTGGCCGGCACCGAGTACGCGACGCTGCTGGAGTCGCGCGCGAACGTGTGGGCGTGGTGGG
GGCGGATCATGGCCAGGCCGTCGGTGAAGAAGGTGGCGCCGTTAATCCACCTCTGGTTGAAGCCGTCTTCG---------
--------------------------------------------------------------------------------
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----------------------------------------------------
>chr1A_987
AG---AGAGA----------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------GAGCCAGACATGGGCGGTGCCGTGAAGG
TGTACGGGGTGGGGGCGTCTCCGTTCGTGGCGACGGTGCTCTTGTGCCTGGAGGAGACGGGCGCAGACTACGAGCTCGTC
CCCCTCGACATGGCGGCGCGTGAGCAGAGGGCCGAGCCACACCTCTCCCGAAACGTACGTCGGTTCTGCTGAGCTCAACC
ATCAACCACAGCACTCTACCTTCTTAATCCCATTTTCCCGTGACAAGTGTTATTAGTCAGG-TGCTCTAATCTTCTATCT
CATTCCATTTTTCCATGTTAAGTTTTCTTGTATGCTTCAATCTTGCAGCCTTTCGGGAAGATCCCAGTGTTAGAGGACGG
AGAGCTGACTCTCTTCGGTA-TGAAATTCTCACGCTCA-TCACAAATCAGACCAT---AGCATCTTAATCAAAACCTCAC
TTTTACAAAAGATGATTAGATTTTTCTTTTGCCCTATCAATTAATCCGCACGTCGGTAATAC--GATCTCAGAATCGCGC
GCGATTTCTCGGTACGTGCTCCGCAAGTACGG------AGGCACCAACCCCACCACCGATCTTCTAAGGGAATCCAGCCT
CGAGGAATCAGCCATGGTGGACGTGTGGACGGAGGTGGAGGCCCACCAGTACCAGCCGGCCATCGAACACATCGTCCAGC
AGTGCGTCATCCTGCCGTTCATCGGCGGCGCGCGAGACCAGGCCGTTGTCGACGAGAACGTGGGGAAGCTGGAGAAGGTC
CTGGACGTGTATGAGGCGCGGCTGTCGACGCACGCGTACCTCGCCGGAGATTTCTTCAGCCTCGCCGACCTCGTCCACTT
CGGTATCACCTACTACCTGGTGGCCGGAACCGAGTACGCCACGTTGCTGGAGTCGCGCGCGAACGTGTGGGCGTGGTGGG
GGCGGATCATGGCCAGGCCGTCGGTCAAGAAGGTGGCGCCGTTAATCCACCTCTGGTTGAAGCCATCTTCGTCTGCTTAA
GTTCAATATCGTAAATTC--------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------
>chr4D_2246
ATTACCGA------------------------------------------------------------------------
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------------------------------------------------------------------AAAAGGG--TTT-C
CCCCGCTTTATATTATAAAGCAAACAACATCACATACATCTGAGCGAGGCAAACAAACACACGCCACCACGACACACACC
GAACACACCCAAGGCTAGATACAAAGGTGCCGAGCACCATCACACCACCCGGACACAACCAAGCAAACATAATATGAGCT
ACGAAGAACCACTTGGAGCCACCGAGGGGGTGAGATGGACCATGACGAAGCAAGGACTCTAAGACGGTGCCTCCCAGAAG
GGTACGACCACGGATAGCCGCCACCGTCCGATCCGCAGATCAAGTTTTCACCCGGAGCGACGTAGGGGGTGGGAGCACCG
CGACGGAGCCTTCAAGAAGGATACGACGTCCACGGACGCCGCCACCGACGGCCAGAAACTGGGCAAGTGATGAACCCCGG
TGCTCGCACCCCGCCGACACACCCCTGCTCCGCCAACCACCCGCAGCCACGTCCCCC-GCGAAGCCATGGCTGCTCGTCC
GCACCTGAGACGCAGGTTCCGCCCCCGAACGCCACGCCTCCCGCCGCCAGGGCCGCCGCCCAACATCCAGACACCCCCGA
GACCATCCAAAGAGATCAACTTTGCACCAAAGGAACACCACTGACCGACGAA
>chr1A_2247
-TTACCGA------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------AAAAGGG--TTT-C
CCCCACTTTATATTATAAAGCAAACATCATCCCATACATCTGAGCGAGCCGAACAAACACACACCACCACGACACACACC
GAACACACTCAAGGCTAGATACAAAGGTGCCGAGCACCA-CACACCACTCGGACACAACCAAGCAAACATAATATGAGCT
ACGAAGAACCACTTGGAGCCATCGAGGGGGTGAGATGGACCATGACGAAGCAAGGACTCCAAGACGGTGCCTCCCAGAAG
GGTACGACCACGGATAGCCGTCACCGTCCGACCCGTAGATCAATTTTTCACCCGGAGCGACGCAGGGGGTGGGAGCACCG
CGACGGAGCCTTCAAGAAGGATACGATGTCCACGGACGCCGCCACCGACGGCCAGAAACTGGGCAAGTGATGAACCCCGG
TGCTCGCACCCCGCCGACACACCCCTGCTCCGCCAACCACCCGCAGCCACGTCCCCT-GCGAAACCATGACTGCTCGCCC
GCACCTGAGACGCAGGTTCCGCCCCCGAACGCCACGCCTCCCGCCGCCAGGGCCGCCACCCAACATCCAGACACCCCCAA
GACCATCCAAAGAGATCAACTTTGCATCAAAGGGACACCACTGACCGATGAA
>chr2A_2247
TTG-CCGA------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------------AAAAGGG--CTT-C
CCCCGCTTTATATTATAAAGCAAATAACATCACATACATCTGAGCGAGACAAACAAACACACGCCACCACGACATACACC
GAACACACCCAAGGCTAGATACAAAGGTGCCGAGCACCATCACACCACCCGGAAACAACCAAGCAAACATAATATGAGCT
ACGAAGAACCACTTGGAGCCACCGAGGGGGTGAGATGGACCATGATGAAGCAAGGACTCCAAGACGGAGCCTTCCAGAAG
GGTACGACCACGGATAGCCGCCACCGTCCGATCCGCAGATCAAGTTTTCACCCGGAGCGATGCAGGGGGTGGGAGCACCG
CGACGGAGCCTTCAAGAAGGATACGACGTCCACGGACGCCGCCACCGACGGCCAGAAACTGGGCAAGTGATGAACCCCGG
TGCTCGCACCCTACCGACACACCCCTGCTCCGCCAACCACCCGCAACCACGTCCCCC-GCGAAAACATGGCTGCTCGTCC
GCACCTGAGACGCAGGTTCCGCCCGCGAACGCCACGCCTCCCGCCGCCAGGGCCGCCGCCCAACATCCAGACACCCCCAA
GACCATCCAAAGAGATCAACTTTGCACCAAAGGAACACCACTGACCGACGAA
>chr3A_2247
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------------TTACCGAAAAAGGGTTTCCC
CCCGCTTTATATTTATAAAGCAAACAACATCACATACATCTGAGCGAGCCAAACAAACACACGCCACCACGACACACACC
GAACACACCCAAGGCTAGATACAAAGGTGCCGAGCACCATCACACCACCCGGACACAACCAAGCAAACATAATATGAGCT
ACGAAGAACCACTTGGAGCCACCGAGGGGGTGAGATGGACCATGACGAAGCAAGGACTCCAAGACGGTGCCTACCAGAAG
GGTACGACCACGAATAGCCGCCACCGTCCGATCCGCAGATCAAGTTTTCACCCGGAGCGACGCAGGGGGTGGGAGCACCG
CGACGGAGCCTTCAAGAAGGATACGACGTCCACGGACGCCGCCACCGACGGCCAGAAACTGGGCAAGTGATGAACCCCGG
TGCTCGCACCCCGCCGACACACCCTTGCTCCGCCAACCACCCGCAGCCACGTCCCCC-GCGAAACCATGGCTGCTCGTCC
GCACCTGAGACGCAGGTTCCGCCCCCGAACGCCACGCCTCCCGCCGCCAGGGCCGCCGCCCAACATCCAGACACCCCCAA
GACCATCCAAAGAGATCAACTTTGCACCAAAGGAACACCACTGACCGACGAA
>chr4A_2250
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------CCGAAAAAGGGTTTCCC
CCCGCTTTATATTTATAAAGAAAACAACATCACATACATCTGAGCAAGCCAAACAAACACACGCCACCACGACACACACC
GAACACACCCAAGGCTAGATACAAAGGTGCCGAGCACCATCACACCACCCGGACACAACCAAGCAAACATAATATGAGCT
ACCAAGAACCACTTGGAGCCACCGAGGGGGTGAGATGGACCATGACGAAGCAAGGACTCCAAGACGGTGCCTCCCAGAAG
GGTACGACCACGGATAGCCGCCACCGTCCGATCCGCAGATCAAGTTTTCACCCGGAGCGACACAGGGGGTGGGAGCACCG
CGATGGAGCCTTCAAGAAGGATACGACGTCCACGGACGCCACCACCGACGGCCAGAAACTGGGCAAGTGATGAACCCCGG
TGCTCGCACCCTGCCGACACACCCCTGCTCCGCCAACCACCGGCAGCCACGTCCCCC-GCGAAACCATGGCTGCTCGTCC
GCACCTGAGACGCAGGTTCCGCCCCCGAACGCCACGCCTCCCGCCGCCAGGGCCGCCGCCCAACATCCAGACACCCCCAA
GACCATCCAAAGAGATCAACTTTGCACCAAAGGAACACCACTGACCGATGAA
>chr5B_2250
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------CCGAAAAAGGGTTTT-C
CCCCGCTTTATATTATAAAGCAAACATCATCACATACATCTGAGCAAGCCGAACACACACACGCCACCACGACACACGTC
GAACACACCCAAGGCTAGATACAAAGGTGCCGAGCACCATCACACCACTTGGACACAACCAAGCAAACATAA-ATGAGCT
ACGATGAACCACTTGGAGCCACCGAGGGGGTGAGATGGACCATGACGAAGCAAGGACTCCAAGACGGTGCCTCCCAGAAG
GGTATGCCCACGGATAGCCGCCACTGTCTGATCCGTAGATCAAGTTTTCACCCGAAGCGACGCAGGGGGTGGGAGCACCA
TGACGGACCCTTCAAGAAGGATACGACGTCCACGGACACTGCCACCGACGGCCAGAAACTGGGCAAGTGATGAACCCCGG
TGCTCACACCCCGCCGACACACCCCTGCTCCGCCAACCACCCGCAGCCACGTCCCCC-ACGAAACCATGGCTGCCC-TCC
GCACCTGAGACGCAGGTTCCGCCCTCGAACGCCACGCCTCCCGCCGCCAGGGCCGCCGCCCAACATCTAGACACCCCCAA
GACCATCCAAAGAGATCAACTTTGCACCAAAGGAACACCACTGACCGAC---
>chr2A_2251
--------------------------------------------------------------------------------
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----------------------------------------------------------------CGAAAAAGGGTTTT-T
CCCCGCTTTATATTACAAAGCAAACATCACCACATACATCTCAGCGAGCCAAACAAACACACGCCACCACGACACACACC
GAACACACCCAAGGCTAGATACAAAGGTGCCGAGCACCATCACACCACTCGGACACAACCAAGCAAACATAATATGAGCT
ACGACGAACCACTTGGAGCCACCGAGGGGGTGAGATGGACCATGATGAAGCAAGGACTCCAAGACGGTGCCTCCCAGAAG
GGCACGACCACGGATAGCCGCCACCGTCCGATCCGCAGATCAAGTTTTCACTCGGAGCGACGCAGGGGGTGGGAGCACCG
CGAGGGAACCTTCAAGAAGGATACGACGTCCAAGAATGCCGCCACCTACGGCCAGAAACTGGGCAAGTGATGAACCCCGG
TGCTCGCACCCCGCCGACACACCCCTGCTCCGCCAACCACCCGCAGCCACGTCCCCC-GCGAAACCATGGCTGCCCGCCC
GCACCTGAGACGCAGGTTCAGCCCACGAACGCCACGCCTCCCGCCGCTAGGGCCGCCGCCCAACATCCAGACACCCCCAA
GACCATCCAAAGAGATCAACTTTGCACCAAAGGAACACCACTGACCGACGAA
>chr5D_2253
--------------------------------------------------------------------------------
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------------------------------------------------------------------AAAAAGG--TTT-C
CCCCGCTTTATATTATAAAACAAACATCATCACATACATCTAAGCGAGCCGAAC--ACACACGCCACCACGACACACACC
AAACACACCCAAAGCTAGATACAAAGATGCTCAGCACCATCACACCACTCGGACAC-ACCAAGCAAACATAATATGAGCT
ACGAAGAACCACTTGGAGCCACCGAAGGGGTGAGATGGACCATGACGAAGCAAGGACTCCAAGACGGTGCCTCCCAGAAG
GATACGACCACGGATAGCCGCCACCGTCCAATCCACGGATCAAGTTTTCACCCGGAGCGACGCAGGGGGTGGGAGCACCA
CGACGGAGCCTTCAAGAAGGATACGACGTCCATGGACGCCGCCACCGACGGCCAGAAACTGGGCAAGTGATGAATCCCGG
TGCTCGCACCCCGCCGACACACCCCTGCTCCGCCAACCACCCGTAGCCACGTCCCCC-GCGAAACCATGGCTGCCCGCCC
GCACCTGAGACGCAGGTTCCGCCCCCGAACGCCACGCCTCCCGCCGCCAGGGCCGCCGCCCAACATCCAGACACCCCAAA
GACCATCCAAAGAGATCAACTTTGCACCAAAGGAACACCACTGACCGACGAA
>chr3D_2273
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------TTTATATTATAAAGCAAACATCATCACATACATCTAAGCGAGCCGAACAAACACACACCACCACGACACACACC
GAACACACCCAAGGCTAGATACGAAGGTGCCGAGCACCATCACACCAGTCGGACACAACCAAGCAAACATAATACGAGCT
ACGAAGAACCACTTGGAGCCACCGAGGGGGTGAGATGGACCATGACGAAGCAAGGACTCCAAGATGGTGCCTCCCAGAAG
GGTACGACCACGGATAGCCGCCACCGTCCGATCCGCAGATCAAGTTTTCACCCGGAGCGACGCAAGGGGTGGGAGCACCG
CGACGGAGCCTTCAAGAAGGATACGACGTCCACGGACGCCACCACCGACTGTCAGAAACTGGGCAAGTGATGAACCCCGG
TGCTCGCACCCCGCCGACACACCCCTGCTCCGCCAACCACCCGCAGCCACGTCCCCC-GCGAAACCATGGCTGCTCGTCC
GCACCTGAGACGCAGGTTCCGCCCCCGAACGCCACGCCTCCCGCCACCAGGGCCGCCGCCCAACATCCAGACACCCCCAA
GACCATCCAAAGAGATCAACTTTGCACCAAAGGAACACCACTGACCGACGAA
>SNPs
--S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------SS------------SS-S------
----------S--S---S----S-----S-S------------S--------------------------S-SS---S--
---------S-----S----------------------------------------SS---------------------S
--------SS-S------------------------------S-------------------------------------
----S------------S-SSSS----S-------S-------S------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S--------------
-------------------------------------------------------S-----S------------------
------------S---------------------S------------------------------S--------------
----------S-S-------------------S----SS-------S--------SSS----------------------
-----------S-S---------------------------------------S---S------S-S-------------
---------------------------------------------S--------------------S-------------
---------S-----------------------------------------------------S----------------
--------------------------------------------------------------------------------
--------------------------S-----------------------------------------------------
-------S----------S--------------------------------S----------------------------
--------------------S------S-------------------------------------------S----S---
--------S---S-----------------S------S----------S----------------------S--------
-------------------SSSSSSS------------------S------S-SS-S-SS-SSSSSSSS-SS-SS---S-
S-------S----------------S-----S----S----------------------------S--------------
-----------------------S-----------------------------------------S--------------
-------------------------S---S-----------------------------S--S---------SS------
--S----------------S---------------------S-------S---S------------S--S----------
-------S-----S------------------------------S-----------------------------------
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----------------------------------------------------------S---------------------
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----S-------------------------------------S--------------S--S-------------------
-------S-----------------------------------S-------------------------S----------
S------------------------S-----S--------------------
>forward_357
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-----------------AAGTTTGGGCATCCGAGGAG-------------------------------------------
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>reverse_2264
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-----------------------AATGGCGTTGGAGGCTATCT-------------------------------------
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----------------------------------------------------
