>input_sequence_66486
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------------------------------------------------------------------ATGGCCTCCTCTAA
GCTCTTCCTCCTCATCATCAGTGCCATCATCTCCATGGCAATCACTAGTAGTCGTAAGCATGCATCATCATC-----TAG
CTAGCTCTTCAACTTCAATAT-----------------------------AATGCAGAGTATGTACACGGTGATGTAATG
TGCGTACGCCTAATGCATTTGTCTGATGGTTTGCAGCGGCGGCTGCGGCAAATGGTCGCATACATCTCATCATGGTGAAC
AACTGCGCCGAGTCGGTGTGGCCGGCCATGCTCGGCACCACCGGCCACGCCACGCCGCAGTCGGGCGGCTTCCACCTCGG
CCCCGGCGAAGAGACCACCTTCGACGTGCCGGTAGGGTGGTCGGGGCGGGTGTGGCCGCGCCGGGGCTGCTCCTTCGACC
CGCGCGGCATGGGCAAGTGCGCCACGGGCGACTGCGGCGGCGTGCTGCGGTGCGGGGGCGCCCCGGGCGCCACCCCGGCC
ACCGTGGTGGAGATGACGCTGGGGACTCCCCAGTCGCCGATGCACTTCTACGACGTGAGCCTGGTGGACGGGTTCAACGC
GCCGGTGTCCATGACGCCGGTCGGTGGCGGCCGCGGGTGCGGCGTGGCGGCGTGCGGGGCGGACCTGAACGTCTGCTGCC
CGTCGGCGCTGGAGGTGAGGGACCGGGAGGGGAGGGTGGCCGGTTGCCGGAGCGCGTGCCTGGCGATGGGCAGCGACAAG
TACTGCTGCACCGGGGAGTACGGGACGGCGGCGGCGTGCAAGCCCACTATGTTCTCGCACCTCTTCAAGGCCATCTGCCC
CAGGGCCTACAGCTACGCCTTCGACGACGCCTCAAGCCTCAACCGCTGCAAGGCCAACCGATACCTCATCACATTCTGCC
CACCACAACCTGAATGA---------------------------------------------------------------
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>chr4D_1_TraesCS4D01G135200
TTTTTATGGATAATTTCATAAAA-TGTGTTCTGTAATGTGCATCTATCATTATAAACCAGAGCAATTGGCCTGGTAGAAC
TGAATTGGGTCTTCAGAGTTCAGTTGTTGTGTTCAACCATAATCCTCGCTTCTTCAGTCTGAAGGAAAGACAAAAGGGAC
TCATCATGAGCGACAGTGAGATCGAGTTGAAGAGTCTGCCTTTCTGATTTGGAAAGCAGGACTACTCAACATTACATGCT
TTATCATGTGTGCTTTGTGATGAATCAAATTGATATGTTGCGGGATCGCACGCACTTCCGTAAGATCGACATGAGTAAAG
CAAAAGAGATTCCAATGATCACGAACTGGGGCTACCGCTGTCTCATTCTTTTCGTTAGTTATCCAAATCTGCAGCACAGT
AGGTAGCCAAGTAGACGAAAATAAAGCAAGAAACCCGAATCACAAGCAAGGAATAGATCCTGAGG------GAAGAAGAA
GATAGCAATCCCCAAAGGAGAAGGAGAAAAGAAAAGTTAGTATTTGCAGGGGAACGTACATCTTTAGAGTCTGCTCTATC
TCCCTGACATGATTGTCGGCTACAAGCTATGTAGATGCAGTTGCAGGTAGCCCACTCACTGATCAAGTTAATCTACCAGC
TAGCCTGAAGAATTGATCATTAGAGTGTAATTCTTAACATCCATTGCACGCTTGCAG------GGTAGTAGC-----TAG
CATAGTTTCAGTTCAGATAACTAACTGTATAGTAGTAGAATGCAGCTTGAATGCACTGGAGCTTAAACTTTTGTTTGTTT
CAGACATGGAAGAGAGAAAGAAAGAAGGAATATCAAATAAATAAAGGTTCATGCAGGAACAAAGTAGCAGTAGTACTTAT
TAAGTGGTTCAACTGTCAAATCTCATAGGTTTTCTTTGCAATATTATTTTCAATATGGTTACTA-----CTTAAGAGTAA
GACCACCACACC-CCTGCTCCACTTCCAAGTTCGAGCTCAGAGCAAGACACACG--CGCAGACGCCATGGCCTCCTCTAA
GCTCTTCCTCCTCATCATCAGTGCCATCATCTCCATGGCAATCACTAGTAGTCGTAAGCATGCATCATCATC-----TAG
CTAGCTCTTCAACTTCAATAT-----------------------------AATGCAGAGTATGTACACGGTGATGTAATG
TGCGTACGCCTAATGCATTTGTCTGATGGTTTGCAGCGGCGGCTGCGGCAAATGGTCGCATACATCTCATCATGGTGAAC
AACTGCGCCGAGTCGGTGTGGCCGGCCATGCTCGGCACCACCGGCCACGCCACGCCGCAGTCGGGCGGCTTCCACCTCGG
CCCCGGCGAAGAGACCACCTTCGACGTGCCGGTAGGGTGGTCGGGGCGGGTGTGGCCGCGCCGGGGCTGCTCCTTCGACC
CGCGCGGCATGGGCAAGTGCGCCACGGGCGACTGCGGCGGCGTGCTGCGGTGCGGGGGCGCCCCGGGCGCCACCCCGGCC
ACCGTGGTGGAGATGACGCTGGGGACTCCCCAGTCGCCGATGCACTTCTACGACGTGAGCCTGGTGGACGGGTTCAACGC
GCCGGTGTCCATGACGCCGGTCGGTGGCGGCCGCGGGTGCGGCGTGGCGGCGTGCGGGGCGGACCTGAACGTCTGCTGCC
CGTCGGCGCTGGAGGTGAGGGACCGGGAGGGGAGGGTGGCCGGTTGCCGGAGCGCGTGCCTGGCGATGGGCAGCGACAAG
TACTGCTGCACCGGGGAGTACGGGACGGCGGCGGCGTGCAAGCCCACTATGTTCTCGCACCTCTTCAAGGCCATCTGCCC
CAGGGCCTACAGCTACGCCTTCGACGACGCCTCAAGCCTCAACCGCTGCAAGGCCAACCGATACCTCATCACATTCTGCC
CACCACAACCTGAATGAGGCATCGCTATCAATCACCATGTATTTATATTTCTGAATCCAAAACCTGAGTGAACTGTGTAG
CTACATGGAGTATATGATACAGTATGAGGGTGTTTGGGATGTTATTTTGGCTTATGATATAAATGAGACACGTATTACCA
TGCAAAAGTAAATAAATAAAATCCAAACACCATATATCTCTTTTCTT-CTGCCCGATCGAACTGGATGGAGCGCACAGTC
TGATCCCAAACCAGTCAAGAAAAATTATAAGTCCGAAACTAAACCGATAAGATTTGTCCACAAACGAACAACAACGTAGT
AGCAAGTTCAAGGGCTCCTTAAAAATCGG-ATAGTTCAAAGGCACAA--------------------------------A
TTTTAAACATCATCGGCAAGATGGCGTCGGCGTCCCAGCTCTGTCGAGCGGCCTCTATTGATGTAGAAGGGCAACCATTA
TGAATAGGCAACCATTAGCAAAGATGCCCGTGCGTTGTATTGGGAGAT-AAAAATATTATGTCATAGCCAAATAAGTATG
GCTCAATA----GACATATGAGCGTCCTCTACTTTAACACGGTGGCCCACCATGTTAGCCACATATATTATTT---CTCA
CCC-TCGTTGTTGATGGCCGTGTTGTCCATGTAAAACTAATCCCGTCGACCACGAAATGCTCCCAGCGTCTAGAGATATA
AATACTTACCAAAAACTAATTAAATCCTAGACATAAAAGACCTAGCCGCCCAAATTCTAGAGCAA----------TCTTA
TGAAGAACTACTAAAATAGA--ACATGATATTCT-T-AAA---AAAATCTTTAAAAGCATAATTTCAAATAATATGAAAA
TCAACATTAATCCACTGGTTTACATAAACCTCGTATCAGCAGTTTAGAGTACACCGATCTTGAGAAATGAACCTTTTTT-
GCATAGTTTTCACTTTTATTACTTTAGGT--TTTTACCATTTCTTTTTGTCTCCCATTTTATTTTAA-------TTTCTT
TG---TTTAATGTTTTTTACAAGTTTGGTTTTCTTTTCTTTTCATTTTCC
>chr4B_2
-TTTTATGGATAATTTCATAAAA-TGTGTTCTGTAATGTACATCTATCATTATAAACCAGAACAATTGGTCTGGTAGAAC
TGAACTGGGTGTTCAGAGTTCAGTTGTTGTGTTGAACCATAATCTTCGCTTCTTCAGTCTGAAGGAAAGACAAAAGGGAC
TCATCATCAGCAACAGTGAGATCGGCTCGAAGAGTCTGCCTTTCTGATTTGGAAAGCAGGACTACTCAACATTACATGCT
TTATCATGTGTGCTTTGTGATGAATCAAATTGATATGTTGCGGGATCGCACGCACTTCCGTAAGATCGACATGAGTAAAG
CAAAAGAGATTCCAATGATCACGAACTGGGGCTACCGCTGGCTCATTCTTTTTGTTAGTTATCCAAATCTACAGCACAGT
AGGTAGCCAAGTAGACGAAAATAAAGCAAGAAACCCGAATCACAAGCAAGGAATAGATCCTGGGGGGAGAAGAAGAAGAA
GATAGCAATCCCCAAAGGAGAAGGAGAAAAGAAAAGTTGGTATTTGCAGGGGAACGTACACCTTTAGAGTCTGCTCTATC
TCCCTGACATGATTGTCGGCTACAAGCTATGTAGATGCAGTTGCAGGTAGCCCACTCACTGATGAAGTTAATCTACCAGC
TAGCCTGAAGAATTGATCATTAGAGTGTAATTATTAACATCCATTGCACGCTTGCAGTTGCAGGGGAGTAGCCAGC----
------TTCAGTTCAGATAACTAACTGTATAG------AATGCAGCTTGAATGCACTGGAGCTTAAACTTTTGTTTGTTT
CAAACATGGAAGAGAGAAAGAA-GAAGGAATATCAAATAAATAAAGGTTCATGCAGGAACAAAGCAGCAGTA---CTTAG
TAAGTTGTTCAACTGTCAAATCTCATAGGTTTTCTTTGCAATATTATTTTCAGTATGGTTACTA-----CTTAAGAGAAA
GACCACCGCACCCCCTGCTCCACTTCGAAGTTCGAGCCCAGAGCAAGACACACACACGCAGACGCCATGGCCTCCTCTAA
GCTCTTCCTCCTCCTCATCAGTGCCATCATCTCCATGGCAATCACTAGTACTCGTAAGCATGCATCATCATCTACAGTAG
CTAGTTCTTTAACTTCAATGCAGAGTTTTTTTTTTTTTGCAGCGAACTTCAAAGCAGAGTATGTACACGGTGGTGTAATG
TCCGTACGCCTAATGCATTTGTTTGATGGTTTGCAGCGGCGGCTGCGGCAAATGGTCGCATACATCTCATCATGGTAAAC
AACTGCGCCGAGTCGGTGTGGCCGGCCATGCTCGGCACCACCGGCCACGCCACGCCGCAGTCGGGCGGCTTCCACCTCGG
CCCCGGCGAAGAGACCACCTTCGACGTGCCGGTAGGGTGGTCGGGCCGGGTGTGGCCGCGCCGGGGCTGCTCCTTCGACG
CGCGCGGCATGGGCAAGTGCGCCACGGGCGACTGCGGCGGCGTGCTGCGGTGCGGGGGCGCCCCGGGCGCCACCCCGGCC
ACCGTGGTGGAGATGACGCTGGGGACCCCCCAGTCGCCGATGCACTTCTACGACGTGAGCCTGGTGGACGGCTTCAACGC
GCCCGTGTCCATGACGCCGGTCGGTGGCGGCCGCGGGTGCGGCGTGGCGGCGTGCGGGGCGGACCTGAACGTCTGCTGCC
CGTCGGCGCTGGAGGTGAGGGACCGGGAAGGGAGGGTGGCCGGTTGCCGGAGCGCGTGCCTGGCGATGGGCAGCGACAAG
TACTGCTGCACCGGGGATTACGGGACGCCGGCGGCGTGCAAGCCCACTATGTTCTCGCACCTGTTCAAGGCCATCTGCCC
CAGAGCCTACAGCTACGCCTTCGACGACGCCTCAAGCCTCAACCGCTGCAAGGCCAACCGATACCTCATCACATTCTGCC
CACCACAACCTGAATGAGGCATCGCTATCAATCACCATGTATTTATATTTCTGAATCCAAAACCTGAGTGAACTGTGTGG
CTACATGGGGCATATGATACAGTATGAGGGTGTTTGGGTTGTTATTTTGGCTTATGATATAAATGAGACACGT-------
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>chr4A_2
-TTTTATGGATAATTTCATAAAAATGTGTTCTGTAATGTACATCTATCATTATAAACCAGAACAATTGGTCTGGTAGAAC
TGAATTGGGTCTTCAGAGTTCAGTTGTTGTGTTGAACCATAATCTTGGCTTCTTCAGTCTGAAGGAAAGACAAAAGGGAC
TCATCATCAGCGACAGTGAGATCGACTGGAAGAGTCCGCCTTTCTTATTTCGAAAGTAGGAGTACTCAACATTACATGCT
TTATCATGTGTGCTTTGTGATGAATCAAATTGATATGTTGCCGGATCGCACGCACTTCCGTAAGATCGACATGAGTAAAG
CAAAAGAGATTCCAATGATCACGAACTGGGGCTACCGCTGGCTCATTCTTTTCGTTAGTTATCCAAATCTACAGCACAGT
AGGTAGCCAAGTAGACGAAAATAAAGCAAGAAACCCGAATCACAAGCAAGGAATAGATCCTGAGG---GAAGAAGAAGAA
GATAGCAATCCCCAAAGGAGAAGGAGAAAAGAAAAGTTGGTATTTGCAGGGGAACGTACACCTTTAGAGTCTGCTCTATC
TCCCTGACCTGATTGTCGGCTACAAGATATGTAGATGCAGTTGCAGGTAGCCCACTCACTGATGAAATTAAGCTAGCAGC
TAGCCTGAAGAATTGATCTTCAGAGTCTAATTCTTAATCTCCATTGCACGTTTGCAG------GGGAGTAGCCAGCATAG
CATAGTTTCAGTTCAGATAACTAACTGCATAG------AGTGCAGCTTGAATGCACTGGAGCTTAAACTTTTGTCTGTTT
CAGACATGGAAGAGAGAAAGAAAGAAGGAATATCAAATAAATAAAGGTTCATGCAGGAACAAAGTAGCAGTA---CTTAT
TAAGTGGTTCAACTGTCAAATTTCATAGGTTTTCTTTGCAATATTATTTTCAGTATGGTTACTATACTACTTAAGAGTAA
GACCACCACACCCCCTGCTCCACTTCGAAGTTCGAGCTCAGAGCAAGACACACACACGCAGACGCCATGGCCTCCCCTAA
GCTCTTCCTTCTCCTCATCAGTGTCATCATCTCCATGGCAATCACTAGTACTCGTAAGCATGCATCATCATC-----TAG
CTAGTTCTTTAACTTCAATGCAGAGTTTTTTTTTGTTTGCAGCGAACTTCAATGCAGAGTATGTGCACGGTGATGTAATG
TCCGTACGCCTAATGCATTTGTCTGATGGTTTTCAGCGGCGGCTGCGGCAAATGGTCGCATACATCTCATCATGGTGAAC
AACTGCGCCGAGTCGGTGTGGCCGGCCATGCTCGGCACCACCGGCCACGCCACGCCGCAGTCGGGCGGCTTCCACCTCGG
CCCCGGCGAAGAGACCACCTTCGACGTGCCAGTAGGGTGGTCGGGGCGGGTGTGGCCGCGCCGGGGCTGCTCCTTCGACG
CGCGCGGCATGGGCAAGTGCGCCACGGGCGACTGCGGCGGCGTGCTGCGGTGCGGGGGCGCCCCGGGCGCCACCCCGACC
ACCGTGGTGGAGATGACGCTGGGGACTCCACAGTCGCCGATGCACTTCTACGACGTGAGCCTGGTGGACGGGTTCAACGC
GCCGGTTTCCATGACGCCGGTCGGTGGCGGCCGCGGGTGCGGCGTGGCGGCGTGCGGGGCGGACCTGAACGTCTGCTGCC
CGTCGGCGCTGGAGGTGAGGGACCGGGAAGGGAGGGTGGCCGGTTGCCGGAGCGCGTGTCTGGCGATGGGCAGCGACAAG
TACTGCTGCACCGGGGAGTACGGGACGCCGGCGGCGTGCAAGCCCACTATGTTCTCGCACCTGTTCAAGGCCATCTGCCC
CAGGGCCTACAGCTACGCCTTCGACGACGCCTCAAGCCTCAACCGCTGCAAGGCCAACCGATACCTCATCACATTCTGCC
CACCACAACCTGAATGATGCATCGCTATCAATCACCATGTACTTATATTTCTGAATCCAAAACCTGAGTGAACTGTGTAG
CTACATGGAGTATATGATACTATAGTATGA------GGGTGTTATTTTGGCTTATGATATCAAAGAGACACGTATTATCA
TG-----------AAAAAAAGTGAAAAGACCAAATAAAAGCTTAACCAAACACTGT------------------ACAGCC
TGATCCCAAACCAGTCAATTTTTTTTACAAGTCGGCAGCTTAACCGATAAGTTCTATCCACAAACGAACAACGACGT-GT
AGCAAGTTCAAAGGTTCCTTAAAAAAAGGCATAGTTCAAAGGCATAACACGCCAGACGGGGGTGATGGCGGAGACACAAA
TCTTAAACATCATCAGCGAGATGGCGTCGGCGTTCCAGCTCAAGCGAGCAAGCT-TATTGATGTAGAAGGGCAACCATTA
TGAATA--------------------------------------------------------------------------
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>chr4B_1993
TATAT---------------------------------------------------------------------------
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----------------------------------------------------------ATAAATGAGACACGTATTACCG
TGAAAATAAATAAATATAAATTCCAAACACCATATATTTCTTTTTTTTCTGCCCGGTCGAACTGGATGGAGCGCACATTC
CGATCCCAAACCAGTCAAGAAAAATTATAAGTCCGAAACTAAACCGATAAGCTTTATCCACAAACGAACAACAGCGTAGT
AGCAAGTTCAAGGGCTCCTTAAAAATCGG-ATAGTTCAAAGGCACAA--------------------------------A
TCTTAAACACCATCAGCGAGATGGCGTCGGCGTCCCAGCTTTGTCGAGCGGCCTCTATTGATGTAGAAGGGCAACTATTA
TGAATAGGCAATCACTAGCAAAGATGCCCGTTCGTTGTATCAGGAGAC-AAAAATATTATGTCATAACCAAATAAGTATG
GCTCAATA----GACATATGAGCGTCCTCTACTTTAACACGATGACCCACCATGTTAGCCACTTATATTATTT---CTCA
CCC-TCGTTGTTGAGGGCCGTGTTGTTCATGTAAAACTAATCTCGTCGACCACGAATTACTCCCAGCGTCTAGAGATATA
AATACTTACCAAAAACTAATTAAATCCTAGACTTAAAAGACCTAGCCG-CCAAATTCTAGAGCAA----------TCTTA
TGGAGAACTACTAAGATAGA--ACATGATATTCT-T-AAAAAGAAAATCCTTATAAGCATAATTTCAAACAATATGAAAA
TCAACATTAATCCACTGGTTTACATATACCTCGTATCAGCAGTTTAGAGTACACCGGTTTTGAGAAATGAACCTTTTTT-
GCATAGTTTTCACTTTTATTATTTTAGGT--TTTACCTTTTCTTTTTTGTCTCCCATTATATCTTAA-------TTT---
--------------------------------------------------
>chr2D_2322
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---------------TAGCAAACATGTCCGTGCGTTGCAACGGGAGAC-AAAAATATTATGTCCTAGCC-AATAAGTATG
GCTCAATACCCAGACATACGAGCGTCTTCAGTGTTAACACGGTGGACCACAATGT-AGGCACTTGTATTTTTTTTCCTCA
CCG-TCACTGTTGATGGCCGCGATGTCCACGTGAAACTAATCTCGTCGACCACAAACTACTCCCAACGCCTAGATATATA
AATACTTTCCAAAAACTAATTAAATCCTAGACATAAAAGACTTAGCCGCCCAAATTCTAGAGCTA----------TCTTA
TGGAGAACTACTAAAATAGACCACATGATATACT-TAAAG---CAAATCTTTATGAGCGCAATTTCAAACAATATGGAAA
TCAACATTGAGCCACTCGTTTACATAAACCTCGTGTCAGCAGTTTAC-GTACACCGGTTTTGGGAAATGAACCTTTTTT-
GTTATGGTTTTATTATTATTATTTTACAT--TTAGCCTTTTCTTTTTTGTTTCCCTTTTTCTGTTAAATTTTCCTTTTTT
TG---TTTAAGTTTATTTTCAAGTTCTGTTTTCTTTTCTTCTCTTTTT--
>chr7B_2322
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---------------TAGCAAACATGTCCGTGCGTTGCAACGGGAGAC-AAAAATATTATGTCCAAGACAAATAAATATG
GCTCAGTACCCCAATATATGAGCGTCCTCTACTTTATCACAGTGGCCCACCATGT-TGCCACTTATATTATTT---CTCA
CCC-TTACCATTGATGGCCGTGGTGTCCACGT-AAACTAATCTCGTTGACGACGAACTACTCCCAACGCGTAGACATATA
AATACTTACCAAAAACTAATTAAATCCTAGACATAAAAGACTTAGCCACCCAAATTCTAGAGCTATCTAGGGCAATCTTA
TAGAGAACTACTAAAATAGACCACATGATATTCT-TTTCAAACATATA-TTTATGAGCACAATTTTAAACAATATGAAAA
TCAACATTACTCCACTGGTTTACATAAACCTCGTATCAGCAGTTTAGAGGACACCGGTTTTGGGAAATGAACCTTTTTTT
GCCTGGTTTTTATTTTTATTATATTACGTC-TTTACTTTTTCTTTTTTGTTTCCCTTTTCCTTTTCC-------TTTTTT
TTCATTTAAGTTTTGTTATCAAGTTCGGTTTTCTTTTATTTT--------
>chr3A_2325
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------------------CAAAAATGTCCATGTATTGTAACGGGACAAAAAAAATATTATGTCCTAACCAAATAAGTATG
GCCCAATACTCCAACATATGAGCATCATCTATTTTAACAAGGTGGCCCACCATGT-TGCCCCTTATATTATTT---CACA
ACC-TTATTGTTGATGGGCGCGGTGCTCACGTAAAACTAATCTCGTTGACCGCAAACTACTTTCAATGCCTAGACATATA
AATACTTACCAAAAACTAATTAAATCCTAAACATTAAAGACTTAGCCACCCAAATTCCAGAGCTATTTAGAGCAATCTTA
TGGAGAACTACTGAAATAGA--TCATAATATTCTCTAAAA---AAAATCTTTATAAGCATAATTTCAAACAATATGAAAA
TTAACATTAAGCCACTGGTTTACATAAACCTCGTATCAATAGTCTAGGAACC----------------------TTTTTT
GCCTGGTTTTTATTTTTATTATTTTACGTTCTTACCTTTTACTTTTTTGTTTCCCTTTTTCTTTTAA-------TTTTTT
TC---TTTAATGTTTTTTTCAAGTTTGGTTTTCTTTTATTTTTGTTTTC-
>chr2D_2349
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------------------------------------------GGAGAC-AAAAATATAATGTCCTAGCCAAATTAGTATG
GCTCAATACCAC-ACATATGTGTGTCCTCTACTTTAACACGGTGGCCCACCATGTTAGCCACTTATATTATTT---CTCA
CCCCTCGTTGTTAATGGCCGCGGTGTCCACATAAAACTAATCTCGTCGACCATGAATTACTCCCAACTCCTAGACTTATA
GATACTTACCAAAAACTAATTAAATCCTAACCATAAAAGACTTAGGTGCCCAAATTTTAGAGCTATCTAGAGCAATCTTA
TGGAGAACTACTAAAATAGA--TCATGATATTCT-T-AAA---AAAATCTTTATAAGCATAATTTCAAACAATATGAAAA
TTAACATTAATCCACTGGTTCACATAAACCTCGTATCAGCGGTTTAGAGAAAACCAATTTTGACAAATGATCTTTTTTTT
GCATGGTTTTCATTTTTATTATTTTACATT-TTAACCTTTTCTTTTTTGTCTCCCTTTTTCGTTTAA-------ATTCTC
TA---TTT------------------------------------------
>SNPs
---------------------------------------S---------------------S-------S----------
---------------------------------S----------S-----------------------------------
-------S-----------------S-S----------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------S-----------------------------S---------
--------------------------------------------------------------------------------
--------------------------------------S---------------------S-------------------
---------------------------------------------------------------S----------------
-----------------------------------------------------------------S--------------
--------------------------------SSSSSS------------------------------------------
------------------------------------------------------------------------SSS-----
----------------------------------------------------S---------------------------
--------------------------S--------------------------S--------------------------
-------------S------------------------------------S-----------------------------
----S----S---------SS-----------------------------------------------------------
-S------------------------------------------------------------------------------
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-------------------------------------------------------------------------------S
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----------------------------S---------------------------------------------------
---------------------------S----------------------------------S-----------------
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--------------------------------------S-----------------------------------------
--S---SSS-S-S-------S----------------S------S----------S------------------------
---------------------------------------------------S---S------------------------
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-S------------S--S--------------------------------------------------------------
-----------S--S-------------------------S------S--------------------------------
--------------------------------------------------------------S-----------------
------------------------------------------S-------------S-S---------------------
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--S--------------------------------------------------S---------------S----------
----------------------------------------------------------S---------------------
---------------------S------------SS-SS--SS-------------------------------------
------------------S------------------------S-----S
>forward_1014
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----------------------------------AGCTCAGAGCAAGACACACG--------------------------
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>reverse_2617
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--------------------------------------------------------ATGCTCCCAGCGTCTAGAGA----
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