>input_sequence_66445
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----------------------------------------------------------------ATGGGCATCGCCGGCC
TCCCTTCTGACATCCTCGTGGAGGTGACTGCCAGAATCGCCGGGGAGTCAACGACGCCCCTCGACGACATCGTCAGCCTC
AGGCGATCGTAAGTGACCAATTAATTGTTCCTTTCCTTTCTGATGTTCGCGTGTGATTGTGAAATGATGCAAGGTGCTAC
ATC-------ATGCGCATGTATCTCTTCAGATGCAAGGTGTTCCGCGACGCGACGGCGGCGAGGGAGGTGGGCCGGTGCA
TGGCGGTGGACAGGGAGTGGCGTCTGCACTGGTGGGACAAGGAGAGGTTCCTCTCGGTGCTCGGGGAGTGCGCGGCCACC
GGCAACCCCGAAGCATCCTACATCCTCGGCCTGGTAATGTCTGAAGCACGGATACCCATCTTGCAGAATCGCATCATGTT
CAGTTTGTTCACTTGCTAACCAACCCAGCTGCTACAATTCTGACATTTTCTTCCTTCGCCAGGAGGAGATCTGCAACCGT
AGGGGAAAGGAGAGCGGGCTCCAGCACCTCCACCGTGCCATGAAGCACGGCCATGCCGTTGCGGCCTACACCATCGGCAT
GATTATGCTGCGCGACGCGTACAATCCCGAAGGTATCGAGGAGGCAATGGGATATCTGGAGGGATGCTCTGCAGCAAGAA
CAAAGAGCAAGATCAAGATTGCCTCCGTTCGCAGAGAGGCCGCTTCGGTCATGAGAAGGCTGACGATGCGCCGCTGGAGG
ACGGCCGAGCCTGCTGCGCCCTGCGCCGACCCGCGGTGCGGGGAGATGGAGACGGCGGAGGCCTGGGACGAGGACGACGA
ACAGAGGAGGTTCTGCAGCCGGCTGTGCAGATGGAAACATGAATACCGCAAATTTGTGCAGAGGATTTAA----------
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>chr6B_1_TraesCS6B01G123200
TATGCCCGAGTGCTACTGATCAGGAACCAACGTTCCACACTGTTCTGAGATGTGAACTAGTATGCTTGCAGTACTATATA
AAGAACAGTTTGATTCATACAGCCTAAATAAAATCGTTCTGAACAATCAT----TTTTTTGCTTGTTGCTGTATAGGGAG
AAGATTCACTGGTGATTTGGTTTAGTTGCTGTCACGAATGTTGTGCACAGCGACATGCCCTGATGCTGTTCCAGATTGCA
TACTGGTGAGTACCCCTCACCCAATTTGACTACCAATTTTGTTTTTATGCATTTT--TTCTTTCTCAAACTTAGATA--T
TT--ACTAGTACATGAGATGCTAGATGAACGTCTTAGACGCTAGTATATAAAATTACAGCTACATCGTGACAAGATTTCA
GTTCCTAATCTCTGCTTGTGGAAACAAA--AAGAGATATTTGTGCTTGCCTTTTTAGCACAAACATATCTTTAT------
---TGTATAAATCAGACCCTTTTCTCACCAATACAATATTCTTCCTAATACAGACATTTCAAGGTTACATATTTTTAGCG
CACAACCTTTTCATATATATAGAATAAAATAGGTGGCCTTGTTCACTTTCTCATTCTTCGACCAC---TAGAATGCATCA
CTGTTCTCTAGTAGGTCAGCAAATTTGCAGCCGTGCAGTGAACCAACCAATGGAAACGAGAGCTGGTTTGCTTTGACATC
TGAGACCCCACGCGGAAGCTTAGCTAGACATCCATCCAACTATAATAAACTAGTAGTATCACCTCTTGGTCCTTGCGTGA
TAGATTGGTTTATGCCCCCCCACCGCTTCTCTGTGACCACAAACAACTTCCTTTCTGCCAACCGCCATTGCAAGTTGCTA
TAATTGGCTGTACTTACACGTGCTTCTGGTCTGGTCATCATCTACCTTAACAAGGCAAAAGGGGACGAGGAGGAGGATTG
GGGTGAGGAGACGGAGGAGGGGCTCACGGGGCAAGGAGGAGGAGGAGGGGCTGATCCGTCAGGCATGGGCATCGCCGGCC
TCCCTTCTGACATCCTCGTGGAGGTGACTGCCAGAATCGCCGGGGAGTCAACGACGCCCCTCGACGACATCGTCAGCCTC
AGGCGATCGTAAGTGACCAATTAATTGTTCCTTTCCTTTCTGATGTTCGCGTGTGATTGTGAAATGATGCAAGGTGCTAC
ATC-------ATGCGCATGTATCTCTTCAGATGCAAGGTGTTCCGCGACGCGACGGCGGCGAGGGAGGTGGGCCGGTGCA
TGGCGGTGGACAGGGAGTGGCGTCTGCACTGGTGGGACAAGGAGAGGTTCCTCTCGGTGCTCGGGGAGTGCGCGGCCACC
GGCAACCCCGAAGCATCCTACATCCTCGGCCTGGTAATGTCTGAAGCACGGATACCCATCTTGCAGAATCGCATCATGTT
CAGTTTGTTCACTTGCTAACCAACCCAGCTGCTACAATTCTGACATTTTCTTCCTTCGCCAGGAGGAGATCTGCAACCGT
AGGGGAAAGGAGAGCGGGCTCCAGCACCTCCACCGTGCCATGAAGCACGGCCATGCCGTTGCGGCCTACACCATCGGCAT
GATTATGCTGCGCGACGCGTACAATCCCGAAGGTATCGAGGAGGCAATGGGATATCTGGAGGGATGCTCTGCAGCAAGAA
CAAAGAGCAAGATCAAGATTGCCTCCGTTCGCAGAGAGGCCGCTTCGGTCATGAGAAGGCTGACGATGCGCCGCTGGAGG
ACGGCCGAGCCTGCTGCGCCCTGCGCCGACCCGCGGTGCGGGGAGATGGAGACGGCGGAGGCCTGGGACGAGGACGACGA
ACAGAGGAGGTTCTGCAGCCGGCTGTGCAGATGGAAACATGAATACCGCAAATTTGTGCAGAGGATTTAACGTTTTGATT
CATTAGTAGGCTGTCGGCCACTGTGCCGGCAGTAAAAGTTGTGAGACACAATTTCAGATTTATCACTTTATGCTTCTCCA
ATTCTAGATCTGCCATCCCAATTTTTCTCATTCCTATT--AAAGCTGGCTTAGGCACTTTGCCATCCCC----GGTGGTT
AGGTAGTGATATTTTCTTGTGGGTCACTGGCTTGCGTGTATC-TTTTTGGGGCTGCGATATGCTTGTATTTTGTGACATC
AGTGCTTTTATTTCGGCCATTTTTGTGAAAACTGTCAAATTCCTGCC------CCAACTCATTGTAGTGTCTCGAAGAGA
ACTTTTAGGTCAGTTTTTCATATTTTTCAGCGGTTTGTGTCAATGAAAATGGGGTGGAGGTTATGAACCTC-CCCACGAG
TGTATCATGGAGCGTGAACTAGTCATTTACTCCCTCCATTCCTAAATATAAGTCA--------ATTTCAATATAAACTAC
ACACGGGTATATATAAACGTATATTAG--TGTAGATTCATTTATTTTGCTTTGTATGTAGTTCATGTTGTAATCTCTAAA
AGGACTTATATTTAAGAACGGAGGAAGTACTTAACAACAGCGAAATGCCTTGCCACGGGATAACAAAAGATATTTATAGG
CACACTAACATACACGGGATAACAAAAAGTATTTATAGACACACTAACGTAAAAGATGGGCGATGACGTAGTGGGAATGT
ATCCGGTGCACCCACACTTGTGGTGCTACCGGTGCACCGGATGCTATATAATATTTTTTAAAATCTGAATAAATTCTAGC
ATGTTAACGCAATATCAATGTATGATGTCACAAAAAATCGTATACAAATTCAAAATATTTTTTGAGATACAAAAATGATA
AATTTGGCATCAGTGTGAAAATGGGCCAAATCTAAAGCCCAAGATAATGTTATGTACTATTCAGTGTTGAATTTTTCATT
ATTGTTTTTCAAGTTATGTTTCAAATTTTGATTTGAAATGTTGTGACAACCTAC
>chr6A_1
TATGCCCGAGTGCTACTGATCAGGAACCAATGTTCCACACTGTTCTGAGATGTGAACTAGTATGCCTGCAGTACTATATA
AAGAACAGTTTGATTCGTACAGCCTACATAAAATTGTTCTGAACAATCCT----TTTTTTGCTTGCTGCTGTATAGAGAG
AAGATTCACTGGTGATTTGGAGTAGTTGCTGTCACGAATGTTGTGCACAGCGACATGCCCTGATGCTGTTCCAGATTGCA
TACTGGTGAGTACCACTCACCCAATTTGACTACAAATTTTGTTTTAATGCATTTT--TTCTTTCTCAAACTTAGATATTT
TT--ACTAGTACATGAGATGCTAGATAAACGTCTTAGATGCTAGTATATAAATTCACAGCTACATCGTGACAAAATTTCA
GTTCCCAACCTCTGCTTGTGGAAACAAAGAAAGAGACATTTGTGCTTGCCTTTTTAGCACCAGCATATTTTTACTTTTTT
TAGTGTATAAATCAGACCCTTTTCGCACCAGTACAATATTCTTCTTAATACAGACATTTCAAGGTTACATATTTTTAGCG
CACAATCTTTTTC---ATATAGAATAAAATAGGTGGCCCTGTTCACTTTCTCATTCTTCGGCAACTAGTAGAATGCATCA
CTGTTCTCTAGTACGTCAGCAAATTTGCAGCCGTGCAGTGAACCAACCAATGGAAACGAGAGCTGGTTTGCTTTGACATC
TGAGACCCCACGCGGAAGCTTAGCTAGACATCCATCCAACTATAATAAACTAGTAGTATCTCCTCTTGGTCCTTGCGTGA
TAGATTGGTTTATG-CCCCCCACCGCTTCTCTGTGACCACAAACAACTTCCTTTCCGCCAACCGCCATTGCAAGTTGCTA
TAATTGGCTGTACTTACACGTGCTTCTGGTCTGGTCATCATCTACCTTAACAAGGCAAAAGGGGACGAGGAGGAGGATTG
GGGTGAGGAGACGGAGGAGGGGCTCACGGGGCAAGGAGGG---GGAGGGGCTGATCCGTCTGGCATGGGCATCGCCGGCC
TCCCTTCCGACATCCTGGTGGAGGTGACTGCCAGAATCGCGGGGGAGTCGACGACGCCCCTGGACGACATCGTCAGCCTC
AGGCGATCGTAAGTGACCAATTAATTATTCCTTTCCTTTCTGATGTTTGGCTGTGATTGTGAAATGATGCAAGGTGCTAT
ATC-------ATGCGCATGTATCTCTTCAGATGCAAGGTGTTCCGCGACGCGACGGCGGCGAGGGAGGTGGGCCGGTGCA
TGGCGGTGGACAGGGAGTGGCGTCTGCACTGGTGGGACAAGGAGAGGTTCCTCTCGGTGCTCGGGGAGTGCGCGGCCACC
GGCAACCCCGAAGCGTCCTACATCCTCGGCCTGGTAACATCTGAAGCACAGATAC-TATCTTACAGAATTGCATCATGTT
CAGTT-GTTCACGCGCTAACCAACCCAACTGCTACGATTCTGACATTTTCTTCCTTTGGCAGGAGGAAATCTGCAACCAT
AGGGGAAAGGAGAGCGGGCTCCGGCACCTCCACCACGCCATGAAGCACGGCCATGCCGTCGCGGCCTACACCATCGGCAT
GATTATGCTGCGTGACGCTTACAATATCGAAGGCATCGAGGAGGCAATGGGATATCTGGAGGGATGCTCTGCAGCAAGAA
CAAAGAGCAAGATCAAGATTGCTTCCGTACGCAGAGAGGCTGCTTCGGTCATGAGAAGGCTGACGATGCGCCGCTGGAGG
ACGGCCGAGCCTGCCGCTCCCTGCGCCGACCAGCGGTGCGGGGAGATGGAGACGGCGGAGGCCTGGGACGAGGACGACGA
ACAGAGGAGGTTCTGCAGCCGGCTGTGCAGATGGAAACATGAATACCGCAAATTTGTGCAGTGGATTTAACGATTTGATT
CATTAGTAGGCTGTCGGCCACTCTGCCGGCAGTAAAAGTTGTGAGACACAATTTCAGATTTATCACTTTATGCTTCTCCA
ATTCTAGATCTGCGATCCCAATTTTTCTCGTTCCTATC--GAAGCTGGCTTAG-CACTTTGCCATCCCC----GGTGGTT
AGGTAGTGATATTTTCTTGCGGGTCACTGGCTTGCGTGTATC-TTTTTGGGGCTGCGATATGCTTGTATTTTGTGACATC
GGTGCTTTTATTTCGGCCATTTTTGTGAATACTGACAAATCCCTGCC------CCAACTCATTGTAGTGTCTCGAAGAGT
ACTTTTAGATCAGTTTTTCATATTCTTCAGCGGTTTGTGTCAATGAAAATGGGGTAGAGGTTATGAACCTCTCCCACGAG
AGTATCATGGAG--------------------------------------------------------------------
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>chr6D_1
TATGCCCGAGTGCTACTGATCAGGAACCAATGTTCCACACTGTTCTGAGATGTGAACTAGTATGCTTGCAGTACTATATA
AAGAACAGTTTGATTCGTACAGCCTAAATAA-ATTGTTCTGAACAATCCTCTTTTTTTTTGCTTGTTGCCGTGTAGAGAG
AAGATTCACTGGTGATTTGGAATAGTTGCTGTCACGAATGTTGTGCACAGCGACATGCCCTGATGCTGTTCCAGATTGCA
TACTGGTGAGTACCTCTCACCCAATTTGACTACCAATTTTGTTTTTATGCATTTTCTTTCTTTCTCAAACTTAGATA--T
TTTTACAAGTACATGAGATGCTAGATAAACGTCTTAGATGCTAGTGTATAAAAGCACAGCTACATCGTGACAAAATTTCA
GTTCCTAACCTCTGCTTGTGGAAACAAA--AAGAAACATTTGTGCTTGCCTTTTTAGCACAAACATATTTTTA-------
--GTGTATAAACCGGACCCTTTTCTCACCAATACAATATTCTTCTTA----AGACATTTCAAGGTTACATATTTTTAGCG
CACAACCTTTTCATATATGTAGAATAAAATAGGTGGCCTTGTTCACTTTCTCATTCTTCGGCCAC---TAGACTGCATCA
CTGTTCTCTAGCACGTCAGCAAATTTGCAGCCGTGCAGTGAACCAACCAATGGAAACGAGAGCTGGTTTGCTTTGACATC
TGAGACCCCACGCGGAAGCTTAGCTAGACATCCATCCAACTATAATAAACTAGTAGTATCTCCTCTTGGTCCTTGCGTGA
TAGATTGGTTTATG-CCCCCCACCGCTTCTCTGTGACCACAAACAACTTCCTTTCCGCCAACCGCCATTGCAAGTTGCTA
TAATTGGCTGTACTTACACGTGCTTCTGGTCTGGTCATCATCTACCTTAACAAGGCAAAAGGGGACGAGGAGGAGGATTG
GGGTGAGGAGACGGAGGAGGGGCTCACGGGGCAAGGAGGAGGAGGAGGGGCTGATCCGTCAGGCATGGGCATCGCCGGCC
TCCCTTCTGACATCCTCGTGGAGGTGACTGCCAGAATCGCCGGGGAGTCGACGACGCCCCTGGACGACATCGTCAGCCTC
AGGCGATCGTAAGTGACCAATTAATTGTTCCTTTCCTTTCTGATGTTCGCCTGCGATTGTGAAATGATGCAAGGGGCTAT
ATCATGATTCATGCGCATGTATCTCTTCAGATGCAAGGTGTTCCGCGACGTGACGGCGGCCAGGGAGGTGGGCCGGTGCA
TGGCGGTGGACAAGGAGTGGCGTCTGCACTGGTGGGACAAGGAGAGGTTCCTCTCGGTGCTCGGGGAGTGCGCGGCCACC
GGCAACCCCGAAGCGTCCTACATCCTCGGCCTGGTAACGTCTGAAGCACGGATAC-CATCTTACAGAACTGCATCATGTT
CAGTT-GTTCACGCGCTAACCAACCCAACTGCTACGATTCTGACATTTTCTTCCTTTGGCAGGAGGAAATCTGCAACCGG
AGGGGAAAGGAGAGCGGGCTCCGGCACCTCCACCGCGCCATGAAGCACGGCCATGCCGTCGCGGCCTACACCATCGGCAT
GATTATGCTGCGCGACGCCTACAATCCCGAAGGTATCGAGGAGGCAATGGGATATCTGGAGGGATGCTCTGCAGCAAGAA
CAAAGAGCAACATCAAGATTGCCTCCGTACGCAGAGAGGCCGCTTCGGTCATGAGAAGGCTGACGATGCGCCGCTGGAGG
ACGGCCGAGCCTGCCGCGCCCTGCGCCGACCCGCGGTGCGGGGAGATGGAGACGGCGGAGGCCTGGGACGAGGACGACGA
ACAGAGGAGGTTCTGCAGCCGGCTGTGCAAATGGAAACATGAATACCGCAAATTTGTGCAGTGGATTTAACGATTTGATT
CATTAGTAGGCTGTCGGCCACTCTGCCGGCAGTAAAAGTTGTGAGACACAATTTCAGATTTATCACTTTATGCTTCTCCA
ATTCTAGATCTGCCATCCCAATTTTTCTCCTTCCTAATGGAAAGCTCGCTTAG-CACTTTGCCATCCCGGTCAGGTGGTT
TGGTAGTGATATTTT-----------CTGGCTTGCGTGTATTTTTTTTGGGGCTGCGATATGCTTGTATTTTGTGACATC
AGTGCTTTTATTTTGTCCATTTTTGTGAATACTGACAAATTCCCGCCCAACAGCCAACTCATTCTAGTGTCTCGAAGAGT
ACTTTTAGGTCAGTTTGTCATATTTTTTAGCGGTTTGCATCAATGAAA-TGGGATGGAGGTTATGAACCTCTCCCACGGG
AGTATCATGGAGCGTCAAGTAGGCATTTACTCCTTCTGTTTCTAAATATAAGTCTTTTTAGAGATTTCAATACAAACTAC
ATACGAAAGTATATAAATATATTTTAAAATGTAAATTCATTTGTTTTGCTTCGTATGTA---------------------
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>SNPs
------------------------------S-------------------------------------------------
----------------S-----------------S-------------S---------------------------S---
--------------------SS----------------------------------------------------------
--------------S-----------------------------------------------------------------
--------------------------S-----------S---------------S------------------S------
--------S---------------------------S-------------------------------S----S------
--------------------------------------------S-----------------------------------
------------------------------------------------------------S-------------------
-------------S------------------------------------------------------------------
------------------------------------------------------------S-------------------
--------------S----------------------------------------S------------------------
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-------------------------------------------------S-----------S------------------
--------------------------------------------------S----------------------------S
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--------------S----------------------S-----------------S------S------S----------
-----S------SS-------------S-------S--------------------S-S--------S------------
----------------------S------------S-----------------------S--------------------
------------------S-------------------------------------------------------------
----------------------------S---------------------------------------------------
--------------S-----------------------------------------------------------------
-------------------------------------------------------------S----------S-------
----------------------S---------------------------------------------------------
-----------------------------S-----------------------S--------------------------
-------------------S------------------------------------------------------------
-----------------------------S----S--------------------------------------------S
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S--------------S--S---S----------S--SS--S-------------S-----------------S-------
-S---SSSS--------SS---S---S------S--------S--------S-------SSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_31
---------GTGCTACTGATCAGGAACCAAC-------------------------------------------------
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>reverse_1499
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----------------------------------------------------------CCAGGAGGAGATCTGCAACC--
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>forward_1476
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---------------CTAACCAACCCAGCTGCTACA--------------------------------------------
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>reverse_2523
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------------------------------------------AAATGCCTTGCCACGGGATA------------------
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