>input_sequence_66437
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-----------------------------------------------------ATGAGGGACTTCCCGTCCTGCTTCGGG
GAGAGCGGCGTCCAGATCGCGGACGCCGCGTCCTCCTCCAGCAGCGCCGGCAAGGGCGCGGCGCAGAACCTGGTCACCTG
CCTCTACCAGACGCAGCTCGCCGGCCGGCCCTGCGTCGTCTCCGTCACCTGGAGCAAGAGCCTCATGGGGCAGGGCCTCA
GCGTCGCCGTCGACGGCCTCTCCGGCCAGAGCCTCTGCAAGGCGGACATCAAGCCCTGGCTCTTCTCCAAGAAGAAGGGC
TCCAAGAGCCTCGACGTCGACGGCGGCAAGGTCGACATCTTCTGGGACCTCTCCGCCGCCAGGTTCGGCGCCGGGCCGGA
G--------------------------CCGCTGGAGAGCTTCTACGTCGCGCTGGTCTCCGACCTCGAGCTCGCGCTCCT
GCTCGGCGACATGAAGAAGGACGCCTACCGCAAGACCGGCGCCAACCGGCCGGCGCTCAACGCCGCCTTCGTCGCCAGGA
AGGAGCACATCTACGGCAAGAAGATTTACTCCGCCAAGGCGCAGTTCTGCGACAATGGCCAGTTCCACGACCTGGTGATA
GAGTGCGACACCGTCGGCCTCAAGGACCCGTGCCTTGAGATACGCATCGACAAGAAGCCGGTGATGCAGGTGAAGAGGCT
GGCATGGAAGTTCAGGGGAAACCAGACGATCCTCGTCGACGGCCTGCCGGTGGAGGTGTTCTGGGACGTCCACAGCTGGC
TCTTCGGGCCGACGACGGCGAGCAACGCGGTGTTCATGTTCCAGACATGCCAGGCGCCCGAGAAGTCGATGCCGTGGTCG
TACTCGCAGATTTTTAGGGAGTCCCAGCTGCAGGGCCTCGGCTTCTCGCTCATCCTACATGCATGGAAGATTGAGTAG--
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>chr5A_1_TraesCS5A01G456500
AGCAGCAAATTGGCATGGGAGACAATTGTCTCCACGCACGCACCTCAGGAATCTCCCGCCTCAACCTCCTCATTCAGCCC
ACCGATCCAGATATCATCCAAC--------GCCAGTAA-AAAAAGGATCAGAAACTCCCCCTGCTTTTTCCTTTGTTGCT
GTCTCAAGTCTCAACAGCAATGTCCCTCCCGACCTTCGGCCAGTGCCAACTGAAACTGTACTGTAGTGGCACGCACGCAA
GCGCGCAAGAAAAGAAAACCATGGGCAATGGCAGCAGTTACTACAATGGCA-------------------------ATGG
CACCTGCTCCTCC-----TCCTCCTCCCTCCGTCTTCCGCCGTGAGCGTGAGTTGGCTGGCTGACAGTGAGCGCTGCGTG
TCGTGCTGCGTTGTTGTCTGGTAGGGCTGCCCCCATTGATTTGATCCCCCCGGACCTTTTGTCTCCTTCCTTTCCTTTCC
CTTCCCTTCCCCCTCACCACTGCCGCTCGCCTA--CTACTACTACTTGTTCTCACTTCTTGGCCGCTGCTTCT-------
-------GCTTGCTTCCTCGCTCCTCCCACCTCGTCCCTCCCCTCGCCTCCCTCCTCTGGCCGCTAGCTAGC--------
-------TAGATACTGCAGTGGTTGCTGCTTGGCTTTGGCTTTGG----TTGCTTGCTGGTGCTCTCCCCACTCCAGCTT
GCTCCCCTCTCCACACCCCCCTCGGCGGCTTCTGCGGTGAAGGTGCGAGCTCCGGGCATGCCCCCCCGAG-----CTTGA
TTGCGGTCGACGGGGGTGAAGGTGGAAGCTTGCTGCCGGATCGATTGGGGCGCTTGCTTTCCG----------GGCGGTG
CCGCTTTCGGCAGTAAAGGCGGGGGGATCTTGCGCCCACCTGCCGCCGGATCGACAAATCCCCCGCGGCAGCAATCCGTG
TGGCTGCGGGCAGGAGGGTGCCGCGCGCCGCCGCTCCCCCTGTCCGGCATTGCGGGGAGCTCCGCCGAGCTCTGAGCGGG
GGCCGCACGCACGCAAGGTGTTTGGTGAAAAGCGCGGCGCGG----GCGAGCCATGAGGGACTTCCCGTCCTGCTTCGGG
GAGAGCGGCGTCCAGATCGCGGACGCCGCGTCCTCCTCCAGCAGCGCCGGCAAGGGCGCGGCGCAGAACCTGGTCACCTG
CCTCTACCAGACGCAGCTCGCCGGCCGGCCCTGCGTCGTCTCCGTCACCTGGAGCAAGAGCCTCATGGGGCAGGGCCTCA
GCGTCGCCGTCGACGGCCTCTCCGGCCAGAGCCTCTGCAAGGCGGACATCAAGCCCTGGCTCTTCTCCAAGAAGAAGGGC
TCCAAGAGCCTCGACGTCGACGGCGGCAAGGTCGACATCTTCTGGGACCTCTCCGCCGCCAGGTTCGGCGCCGGGCCGGA
G--------------------------CCGCTGGAGAGCTTCTACGTCGCGCTGGTCTCCGACCTCGAGCTCGCGCTCCT
GCTCGGCGACATGAAGAAGGACGCCTACCGCAAGACCGGCGCCAACCGGCCGGCGCTCAACGCCGCCTTCGTCGCCAGGA
AGGAGCACATCTACGGCAAGAAGATTTACTCCGCCAAGGCGCAGTTCTGCGACAATGGCCAGTTCCACGACCTGGTGATA
GAGTGCGACACCGTCGGCCTCAAGGACCCGTGCCTTGAGATACGCATCGACAAGAAGCCGGTGATGCAGGTGAAGAGGCT
GGCATGGAAGTTCAGGGGAAACCAGACGATCCTCGTCGACGGCCTGCCGGTGGAGGTGTTCTGGGACGTCCACAGCTGGC
TCTTCGGGCCGACGACGGCGAGCAACGCGGTGTTCATGTTCCAGACATGCCAGGCGCCCGAGAAGTCGATGCCGTGGTCG
TACTCGCAGATTTTTAGGGAGTCCCAGCTGCAGGGCCTCGGCTTCTCGCTCATCCTACATGCATGGAAGATTGAGTAGGT
GCTTGCAGATCATAAGTTGCTTCTGCGGCCGCCTCCTTTCCAGTGCTAACAAGATGTTCCATTCAGTGTCTGTCTGTTCT
TCCGAGTGCTATGGGAAACTCCAATATATGTTCTTTCAATTTATTTTATTCCTTTTCGGTTTCGCCATCTTCATAAACGA
TGTGTTCGAATTGTCTGGCAAGTTCCAGTGATATTCCAGTCTG-TTTTTGTCATCTCTTCCCCTC-CCCTGTGTTTTGTT
CCTTAAGTGAGATCGGTTCCA---ATGCTCCAAGTAGTTG-AACTATGGCAATGTTCTAAGAAAGAATGCTGTCATGTGT
----G--TATACTGAAAGTTCAGATTTATAATT----TTTGTGTATGGTAACAGTATTGTCTGATGATTGTTCCCCAA--
-------TTTGTTCCCTGATGATC--------------------------------------------------------
---------------------------AGTAACAAATATT-ATCACAATGTAACTTTGGTCCATGTGCAAAAGTGGAGGT
TTTAAGGAATC-AAGACACATGGATTGCTTGAGCATCAAGTCTGTTACATTGATGACAGTCCTTT-TTGTGCTTATCTGT
AG--ATATCTGAATATGCCCATCTTTTGCAGGAGACAGATCATCCTACTGAGGATCATGGAGCTCAGATGATAAAACTT-
-----------------------------------------ACTGAAGATCACCATATTCTGTGCAATTTGGTTGGTACT
ACCAT-------------------------TTTTATAGATCTCCCAAAATGATCATCTTGTGACTT-CCTTTCTGTGGTT
TCTTGGTGCTCTCTTGCAGTACTTTTCTTATTTCTTGTAGTCATCTGCATTGTGTGGCTAGCCAGTAAGGTGGGTGCAGC
TCTACTTTTTATTTTCCCTAAGTGAGGAGGTTGCATTGACATCGCCACATCGGCTATGATGATCAATAGAATTAAGCAGC
CTTTCCGCTTGCTGGACCACTTCAGCTGTGTTTTGAGA-----TATTAAATAGCGTATTATCCCGAATCATAC-ACAGTA
CATTCAAATCAGAGAGCCTGATTTTTCTCTCTCTCTTTCTGATAAGGACACCACTTTATATCTTC---------------
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>chr5B_1
AGCAGCAAATTGGCATGAGAGACAATTGTCTCCACGT----ACCTCAGGAATCTCTC-------------------GCCC
ACTGATCCAGATATCATCCAACATTCCAACGCCAGTAA-AAAAAAGATCAGAAACTACCCCTGCTTTTTTTTGTTGGT--
-------GTCTCAACAGCAATGTCCCGACCTTCAGCAAGCCAGTGCTAACTGAAGCTGTACTGTAGTGGCACGCAAGCAA
AAGAAAG--------AAACCATGGGCAATGGCAGCAGTTACAAAAGGGAGGGAGAGAGGCAGAGGAGGGCAATGGCATGG
CACCTGCTCCTCC-----TCCTCCA--------------CCGTGAGCGTGAGTTGGCTGGCTGGCAGTGAGCGCTGCGTG
CC-----GCGTTGTTATCTGGTAGGGCTGCCCCCATTGATTTGAT-CCCCCGGACCTTTTGTCTCCTTCCTTTCCTTTCT
CCCCT------CCTCACCACTGCCGCTCGCCTCGCCTACTACTACTTGTTCTCACTTCTTGGCCGCTGCTTGGCTTGGCT
TGGCTTGGCTTGCTTCCTCGCTCCTCGCACCTCCCC--------------CCTCCTCTGGCTGCTAGCTAGATAGAGTAG
TAGATAGTAGATACTCCAGTGGTTGCTGCTTTGCTTTGG----------TTGCTTGCTGGTGCTCTCCCCACTCCAGCTT
GCTCCCCTCTCCACGCCCCCCTCGGAGGCTTCTGCGGTGAAGGTGCGAGCTT--------------CGAG-----CTTGA
CTGCGGTCGAAGGGGGTGAAGGCGGAAGCTTGCTGCCGGATCGATTGGGTCGCTTGCTTTCCGGGCGGTGCTTGGCGGTG
CCGCTTTCGGCAGTAAAGGCGGGGGATCT-----------TGCGGCCGGATCGAGAAATCCCCTGCGGCAGCAATCCGTG
TAGCTGCGGGCAGGAGGGTGCCGCGCGCCGCCGCTCCCCCTGTCCGGCATTGCGGGGAGCTCCGCCGGGCTCTGAGCGGG
GGCTCCACGCACGCAAGGTGTTTGCCGAAAAGCGCGGCGCGGGCGAGCGAGCCATGAGGGACTTCCCGTCCTGCTTCGGG
GAGAGCGGCGTCCAGATCGCGGACGCGGCCTCCTCCTCCAGCAGCGCCGGCAAGGGCGCGGCGCAGAACCTCGTCACCTG
CCTCTACCAGACGCAGCTCGCCGGCCGGCCCTGCGTCGTCTCCGTCACCTGGAGCAAGAGCCTCATGGGGCAGGGCCTCA
GCGTCGCCGTCGACGGCCTGGCCGGCCAGAGCCTCTGCAAGGCGGACATCAAGCCCTGGCTCTTCTCCAAGAAGAAGGGC
TCCAAGAGCCTCGACGCCGACGGCGCCAAGGTCGACATCTTCTGGGACCTCTCCGCCGCCAGGTTCGGCGCGGGTCCCGA
G--------------------------CCGCTCGAGGGCTTCTACGTCGCGCTGCTCTTCGACCTCGAGCTGGCCCTCCT
GCTCGGGGACATGAAGAAGGACGCCTACCGCAAGACCGGCGCCAACCGCCCGGCGCTCAACGCCGCCTTCGTCGCCAGGA
AGGAGCACATCTACGGCAAGAAGATTTACTCCGCCAAGGCCCAGTTCTGCGACAATGGCCAGTTCCACGACCTTGTCATA
GAGTGCGACACCGTCGGCCTCAAGGACCCGTGCCTCGAGATACGCATCGACAAGAAGCCGGTGATGCAGGTGAAGAGGCT
GGCATGGAAGTTCAGGGGAAACCAGACGATCCTCGTCGACGGCCTGCCGGTGGAGGTGTTCTGGGACGTCCACAGCTGGC
TCTTCGGGCCGACGACGGCGAGCAACGCCGTGTTCATGTTCCAGACATGCCAGGCGCCCGAGAAGTCGATGCCGTGGTCG
TACTCGCAGATTTTTAGGGAGTCCCAGCTGCAGGGCCTCGGCTTCTCGCTCATCCTACATGCATGGAAGATTGAGTAGGT
GCTTGCAGATCATAAGTTGCTTCTGCGGCCGCCTCCTTCCCAGTGCTAACAAGATGTTCCATTCAGTGTCTGTCTCTTCT
TCCGAGTGCTATGGGAAGCTCCAATATATGTTCTTTCAATTTATTCTATTCCTTTTCGGTTTCGCCGTCTTCATAAACGA
TGTGTTTGAATTGCCTGGCAAGTTCCAGTGATATTCCAGTCTG-TTTTTGTCATCTCTCCCCCTC-CCCTGTGTTTTGTG
CCTCAAGTGAGATCGGTTCCAATTATGCTCCAAGTAGTTG-AACTATGGCAATGTTCTAAGAAAGAATGCTGTCATGTGT
----G--TATACTGAAAGTTCAGGTTTATAATT----TTTGTTTATGGTAACAGTATTGTCTGATGATTGTTCTCCC---
-CCTTCCTTTGTTCCCTGATGATC--------------------------------------------------------
---------------------------AGTAACAAATATT-ATCACAATGTAACTTTGGTCCATGTGCAAAAGTGGAGGT
TTTAAGGAATCAAAGACACATGGATTGCTTGAGCATCAAGTCTGTTACATTGATGACAGTCCTTT-TTGTGCTTATCTGA
AG--ATATCTGAATATGCCCATCTTTTGCAGGAGACAGATCATCCTACTGAGGATCATGGAGCTCAGATGCTACAACTT-
-----------------------------------------ACTGAAGATTACCATATTCTGTGCAATTTGGTTGGTACT
ACCAT-------------------------TTTTATAAATCTCCCAAAATGATCATCTTGTGACTT-TCCTTTTGTGATT
TCTTGGCGCTCTCCTGCAGCACTTTTCTTATTTCTTTTAGTCATCTGCATTGTGCGGCTAGCCAGTAAGGTGGGTGAAGC
TCTGCTTTTCTTTTTC--TAAATGAGGAGGTTGCATTGACATCGCCACATCGGCTATGATGATCAATGGAATTAAGCAGC
CTTTCCGCTTGCTGGACCACTTCAGCTGTGATGTTTGACATATTATTAAATAGAGTATTATCCTGAATCATAC-ACAGTA
CATTCAAATCAGAGAGCCTGATTTTCCTCTCTCTCTTTCTGATAAGGACACCACTTTATATCTTC---------------
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>chr5D_1
AGCAGCAAATTGGCATGAGAGACAATTGTCTCCACGT----ACCTCAGGAATCTCTCGCCTCACCCT---CATTCAGCCC
ACCGATCCAGATATCATCCAAC--------GCCAGTAAGAAAAAAGATCAGAAACT------------------------
-------------------------------ACCTCCAGCCAGTGCTAACTGAAACTGTACTGTAGTGGCACGCAAGCA-
---AAAG--------AAACCATGGGCAATGGCAGCAGTTACAAAAGGGAGAGAGAGAGAGT------GGCAATGGCATGG
CACCTGCTCCTCCCTCCGTCCTCCA--------------CCGTGA--GTGAGTTGGCTGGCTGACAGTGAGCGCTGCGTG
CTGCGTTGCGTTGTTATCTGGTAGGGCTGCCCCCATTGATTTGAT-CCCCCGGGCCTTTTGTCTCTTTCCTTTCCTTTCC
CCCCT------CACCACT---------------GCCTACTACTACTTGTTCTCACTTCTTGGCTGCTGCTTCT-------
-------GCTTGCTTCCTCGCTCCTCCCACCTCCCCTCC----------CCCTCCTCTGGCCGCTAGCTAGC--------
-------TAGATACTGCAGTGGTTGCAGCTTGGCTTTGGCTTTGGTTGCTTGCTTGCTGGTGCTCTCCCCACTCCAGCTT
GCTCCCCTCTCCCAT---------GCGGCTTCTGCGGTGAAGGTGGGAGCTT--------------CGGGCCGACCTTGA
TTGCGGTTGAAGAGGGCGG----GGAAGCTTGCTGCCGGATCGATTGGGGCGCTTGCTTTCCG----------GGCGGTG
CCGCTTTCGGCAGTAAAGGCGGGGGGATCTTGCGCCCACCTGCCGCCGGATCGAGAAATCCCCTGCGGCAGCGGTCCGTA
TAGCCGCGGGCAGGAGGGTGCCGCGCGCCGCCGCTCCCCCTGTCCGGCATTGCGGGGAGCTCCGCCGGGCTCTGAGCGGG
GGCCGCACGCACGCAGGGTGTTTGCTGAAAAGCGCGGCGCGGGCG----AGCCATGAGGGACTTCCCGTCCTGCTTCGGG
GAGAGCGGCGTCCAGATCGCGGACGCGGCCTCCTCCTCCAGCAGCGCCGGCAAGGGCGCGGCGCAGAACCTGGTCACCTG
CCTCTACCAGACGCAGCTCGCCGGCCGGCCCTGCGTCGTCTCCGTCACCTGGAGCAAGAGCCTCATGGGGCAGGGCCTCA
GCGTCGCCGTCGACGCCCTCTCCGGCCAGAGCCTCTGCAAGGCGGACATCAAGCCCTGGCTCTTCTCCAAGAAGAAGGGC
TCCAAGACCCTCGACGCCGACGGCGCCAAGGTCGACATCTTCTGGGACCTCTCCGCCGCCAGGTTCGGCGCCGGGCCGGA
G--------------------------CCGCTGGAGGGCTTCTACGTCGCGCTGCTCTTCGACCTCGAGCTCGCCCTCCT
GCTCGGCGACATGAAGAAGGACGCCTACCGCAAGACCGGCGCCAACCGCCCGGCGCTCAACGCCGCCTTCGTCGCCAGGA
AGGAGCACATCTACGGCAAGAAGATTTACTCCGCCAAGGCGCAGTTCTGCGACAATGGCCAGTTCCACGACCTGGTGATA
GAGTGCGACACCGTCGGCCTCAAGGACCCGTGCCTCGAGATGCGCATCGACAAGAAGCCGGTGATGCAGGTGAAGAGGCT
GGCATGGAAGTTCAGGGGAAACCAGACGATCCTCGTCGACGGCCTGCCGGTGGAGGTGTTCTGGGACGTCCACAGCTGGC
TCTTCGGGCCGACGACGACGAGCAACGCCGTGTTCATGTTCCAGACATGCCAGGCGCCCGAGAAGTCGATGCCGTGGTCG
TACTCGCAGATTTTTAGGGAGTCTCAGCTGCAGGGCCTCGGCTTCTCGCTCATCCTACATGCATGGAAGATTGAGTAGGT
GCTTGCAGACCATAAGTTGCTTCTGCGGCCGCCTCCTTCCCAGTGCTAACAAGATGTTCCATTCAGTGTCTGTCTCTTCT
TCCGAGTGCTATGGGAAGCTCCAATATATGTTCTTTCAATTTATTCTATTCCTTTTCGGTTTCGCCGTCTTCATAAACGA
TGTGTTTGAATTGCCTGGCAAGTTCCAGTGATATCCCAGTCTG-TTTTTGTCATCTCTTCCCCTC-CCCTGTGTTT-GTG
CCTCAAGTGAGATCGGTTCCA---ATGCTCCAAGTAGTTG-AACTATGGCAATGTTCTAAGAAAGAATGCTGTCATGTGT
----G--TATACTGAAAGTTCAGATTTATAATT----TTTGTTTATGGTAACAGCATTGTCTGATGATTGTTCTCCCGCT
TC----CTTTGTTCCCTGATGATCAGTACTCCCTCTGTAAATAAATATAAGAGCGTTTAGATCACTACTTTAGTGATCTA
AACGCTCTTATATTTCTTTACGGAGGGAGTAACAAATATT-ATCACAACGTAACTTTGGTCCATGTGCAAAAGTGGTGGT
TTTAAGGAATCAAAGACACATGGATTGCTTGAGCATCAAGTCTGTTACATTGATGACAGTCCTTT-TTGTGCTTATCTGT
AGATATATCTGAATATGCCCATATTTTGCAGGAGACAGATCATCTTACTGAGGATCATGGAGTCCAG-TGCTACAACTT-
-----------------------------------------ACTGAAGATTACCATATTCTGTGCAATTTGGTTGGTAC-
--CAT-------------------------TTTTATAAATCTCCCAAAATGATCATCTTGTTACTT-CCCTTTTGTGATT
TCTTGGCGCTCTCCTGAAGTACTTTTCTTATTTCTTTTAGTCATCTGCATTGTGTGGTTAGCCAATAAGGTGGGTGCAGC
TCTACTTTTCTTTTTC--TAAATGAGGAGGTTGCATTGACATCGCCACATCGGCTATGATGATCAATGGAATTAAGCAGC
CTTTCCGCTTGCTGGACCACTTCAGCTCTGATGTTTGACATATTATT-AATAGAGTATTATCCTGAATCATAC-ACAGTA
CATTCAAATCAGAGAGCCTGATTTTTCTTTCTCTCTTTCTGATAAGGACACCACTTTATATCTTC---------------
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>chr7B_1002
TGAGG---------------------------------------------------------------------------
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------------------------------------------------------------ACTTCCCGTCCTGCTTCGGG
GAGAGCGGGGTCCAGATCGCAGACACAGTGTCGTCCTTGAGCAGCGCTGGTAAGGGTGCGACGCTGAACATGGTCACCTG
CCTCTACCTTATGCAGTTCGCTCGCCGGCCCTGCGTCATCTCCGTCACCTGTTGCAAGGGCCTCATAGGGTAGGGCGTCA
ACATCGTCATCAATGGTCTGTCCGGCAAGAGCCTCTGCAAGGCGGACATCAAGCTCGGGCTTTTCTCCAAGAAGAAGGGC
TCCAAAAGCCTCGACATTGACGGCGGCAAGGTCGACATCTTCTAGGGCCTGATG--------------------------
GCCGCTAGGTCCAGCATGGAGCCAAAGCCGCTGGAGGGCTTCTTCGTCACGCTGGTGTTCGACCTCGAACTGGTGCTCCT
GCTCGGCGACACGAAGAAGGGTGCGTACAACAAGAC---CGCCAACCAGCCGGCGCTGAACGAACGCG-----GCCAGGA
AGGTGCACATTTACGGCAAGAAGATTTTACTCT-------GCAGTTCTGCGACAATGGCCAGTTCCATGA----------
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-----------------------------------------------------------------------------TAG
TTACATAGTGTGACACTGTTGACCTCAAGG---------------------------------------------
>chr4B_1042
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--------------GATCACGGACATAGTGTCGTCCTTGAGCAGCGCTGGAAAGGGCGCGTCGCTGAACCTGGTCACCTG
CCTCTACCTTACGTAGTTCGCTCGCCGGCCCTGCGTCATCTTGGTCACCTGGAGCAAGAGCCTCATAGGGTAGGGCCTCA
GCATCGTCGTCGATGGTCTGTCTGGCAAGAGCCTCTGCAAGGCGGACATCAAGCCCGGGCTTTTCTCCAAGAAGAAGGGC
TCCAAAAGCCTCGACATTGACGACGGCAAGGTCGACATCTTCTGGGACCTGTTG--------------------------
G--------------------------CCGCTGGAGGGCTTCTACGTCGCACTGGTCTTCGACCTCAAACTGGCGCTCCT
GCTCGGCGACACGAAGAAGGGTGTGTACAGCAAGACCGGTGCCAACTAGTCGACGCTGAAGGCCGCGTTCGTGACCTGGA
AGGTGCACATTTACGGCAAGAAGATTTTACTCTA-------CAGTTCTGTGACAATGGCCACTTCCATGACGG-------
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------------------------------------------------------------------------------TG
TCATAGAGTGTGACACTGTTGACCTCAAGG---------------------------------------------
>chr5B_1503
TTTTT---------------------------------------------------------------------------
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-------------------------------------------------TCCTTTTTCGGTTTGTCATCTTCATAAACGA
TGTGTTTGAATTGTCTGGCAAGTTCCCATGATATTCCAGACTGTTTTTTGTCATCTCTTCCCCTC-CCCCGTGTTT-GTG
CCTCAAGTGAGATCGGTTCTA---ATGCTCCAAGTAGTTC-AAC--TGGCAATGCTCTAAGAAAGAATGCTGTCATGATG
TAAGGTATATACTGAGAGTTCAGATTTATATTT--TATTTGTTTATGGTAACAGTATTGTCTAATGATTGCTCTTCC---
-C----CTTTGTTCCCTTATGATT--------------------------------------------------------
---------------------------AGTAACAAATATT-ATCACAATGTAAATTTGGTCCATGTGCAAAAGTGGAGGT
TTTAAGGAATCAA-GACAC-------GCTTGAGCATCAAGTCTCTTACATTGATGACAGTCCTTT-T-GTGCTTATCTCT
AG--TTATCTGAATATGTCCATCTTTTGCAGGAGACAGATAATCCAACTGAGGATCATGGAGTTCTGATGCTTAAACCT-
-----------------------------------------ACTGAAGATTACCATATTCTGTGCAATTTGGTTGGTAC-
--CAT-------------------------TTTTGTAGATCTCAGAAAATGATCATCTTGTGACTT-CCTTTGTGTGGTT
TCTTGGTGCTCTCCTGCATTACTTTTCTTA-TTCTTTTAGTCATCTGCATTGTGTTGCTAGCCAGTAAGGTGGGTGCAGC
TCTACTTTTCCTTTTC--TAAATAAGGAGGTTGCATTGACATCGCCACATCAGCGATGATGATCGATGGTATCAAACAGT
CTTTCTGCTTGCTGGACCACTTCAGCTGTGATGTTTGACA-----TTAAATAGCGTATTATCCTGAATCATACAACAGTA
CATTCAAATCAGAGAGCTTGATTT--CTCTCTCTCTCTCTGATAAGGACACCACTTTATATCTGTTTGCATTTTGTAATT
ATCCTTATTGCATTTAATTCACTTGATGCTTCCATCCCAACAGAAAATTTTAGGTTCATCAATCGCTTTATACAGGATAT
TTTGTTGAAACCTCAGTCAAAATCGTGGGCCTCTGAAACAGGCCGAGTACTATTAAACCAGGCTAGACTTGACATGAATT
AACTTTGCTGTAGGTTGGCATTTGCTTATCATTGATTTTTTTATATGGATATTATAAAGAAAAAAAAACTCTTTGGGGTT
TTCTGTGTTGCTCTCTACTCTGTGTGCGTTAATTAATTTGGATCAGAGGGAGTACAACTTTCTTCTTCTATGTTTAGTTA
ATCATAAGGTCCCATTTTCTTACTACCTCCATCCCTAAATATATGGCATATAAATTCTGTCAAAAAGTCAATACTTTCTA
AGTTTGACCAAGTATATATACAAAAATATGACGATAAACAATACCAAGTCAATATCAACATATCCACCATTAGATACATT
TTCATATAATCTACTTATTCAAATTGTAATAGTTGACATTTTCTTCTATATATTTGGTCAACTTAGAAAGAATTGACTTT
TGGACTGAATTTATATGTATCATTTGGGGACAGAGGGAGTAGTATATATTCACACAGGTGAATAATTGTTTTTTCTGAGA
TAAGTATTTGCACATTTTTGTGGTAGTGTGGACAACGATAGACCATCTACTGTATGCTTCAGCTAATTCTTAATTCTGCT
GATTTTGTTCTTACTACAGATAAAAATTTAGTTAATGCGTTGTGCCATACATCTGTAATCTGTTTGGTCTTTGTAGTTGT
TTAAGTCAGAAATATAAGGTCCCGGCCATGCAACATAATTCTTCCTTCAGTTATTTTTTGATATGATTGTCATAAGTCAT
CGTCTAATCATTGTTCCTGTAATCTCGTAACTTTGCAGATATGCCGAGCATTTGCCTATATACATATTTGTGTTGGCATT
TGCTTATACGCAGCCTCCTTTTCCTGGGAAAGTGGAGTTGATCAACCGGTTGTGATTATCAAGGTGATATCTTGCAGTAT
GACAGTTGAAACTGTTTTCTCCTGCAACCTGTATGTATTCTTTAGAATGACATGTTCAGTCACAGTGCCTTGCAGGTCTT
GGGATACTCCTACAAGGCAAGAGATCAAGTGCATGAGTCCAAACTACACAGAGTTCAAGTTCCCGTGAATTAAGGCTCAT
CCATGGCGCAAGGTAATATGCATATATTATGAGTTTTTTTTAGTATGTCCAGAAATGCTGCACGGGCATGTTGTTTAATC
TAGCATGAACTAATATGAGTGCTGAAAAAAAAATTAGAGTTTCTCAGAAATTCTCGCCAAGAAATTCCTCAGATATTTAA
CAAAAAAAGAAAATTAATTGCAGCGAACAAAAATGAAAAGCTGATGCAACATAAAAGAAAAGAAAAGGCCCACATGAGAC
AGATGTTTCTCAGATGGGCCGGGTTCTGTGTGTCCAGCAAGCACAGCCAAACCTCACGGGCCAGCACCCACGAGTCCTTC
TAAGCTGCTCACACAAAGGGGGCGCTGCTGCGTAGCTGCACGCCTAGCATTAGTCCCACCTCGCCAGTTTACAGGGAGCA
GAACCAGCTTATAACCCGAGGCGCGGCAGGAGGTAGCACGACCTTACTTGAACAGGATCTGTTCTATAGGCTCGTACCGC
TGCATCCTTTACCAATAAGGAGGCAAGCACTTCAGTCTGGTTGATGTATTCTGACCTCTGGGCCAGAGCGTGATTAACGG
CCAGGATTTCTCTGATGGGGCAATCTAACGGCTGTAGAGGATCGTTCCTGCCTGGCTCTCATGCCTGACAGGGTGGCCCA
GAGGTTGTCTGACAGACTACAAAACTTTTTTTCCTTCCGTTTTTTAGCCAGTCTCTTTTTCCAGAAGTACTCTAACAGTT
GTGTCTGTCATCTGTATCTGAAAGAGCGAGCTTGCACTTGACCTTCTGGAACATGATGTCCGGCGGCGCGAGCTGCAGCT
TGAGCATGCATCTGGCCTGGAACTTGCACTTGCAGGTTTACTCCGCCAAGGCGCAGTTCTGCGACAATGGCCAGTCCTTG
TGATAGGGTGTGACACCGTTGGCCTCGAGGACCCATGCCTTGAGATACGCATTGATAAGAAGCCTGTCATGCAGG
>chr5A_2005
TTTTT---------------------------------------------------------------------------
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-------------------------------------------------TCC-TTTTCGGTTTGTCATCTTCATAAACGA
TGTGTTTGAATTGTCTGGCAAGTTCCAGTGATATTCCAGTCTG-TTTTTGTCATCTCTTCCCCTCTCCCTGTGTTT-GTG
CCTTAAGTGAGATCGGTTCTA---ATGCTCCAAGTAGTTG-AACTATGGCAATGCTCTAAGAAAGAATGCTGTCATGATG
TAAGGTATATACTGAGAGTTCAGATTTATATTTGGTATTTGTTTATGGTAACAGTATTGTCTAATGATGGCTCTTCC---
-C----CTTTGTTCCATTATGATC--------------------------------------------------------
---------------------------AGTAACAAAAATT-ATCACAATGTAACTTTGGTCCATGTGCGAAAGTGGAGGT
TTTAAGG---------------------------------TCTGTTACATTGATGACAATCCTTT-T-GTGCTTACCTCT
AG--TTATCTGAATAGGCCCATCTTTTGCAGGAGACAGATGATCCATCTGAGGATCATGGAGTTCAAATGCTAAAACCTA
AGTTAGTGCAAAGTTGAGTCATCTATTTTGGAACGGAGGAAACTGAAGATTACCGTATTGTGTGCAATTTGGTTGGTAC-
--CAT-------------------------TTTTATAGATCTCCGAAAATGATCATCTTGTGACTT-CCTTTGTGTGGTT
TCTTGGTGCTCTCCTGCAGTATTTTTCTTA-TTCTTTTAGTCATCTGCATTGTGTTACTAGCCAGTAAGGTGGGTGCAGC
TCTACTTTTCCTTTTC----------------------------------------------------------------
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>chr5D_2005
TTTTT---------------------------------------------------------------------------
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-------------------------------------------------TCCTTTTCGGTCTTGCCATCTTCATAAACAA
TGTGTTTGAATTGTCTGGCAAGTTCCAGTGATATTCCAGTCTG-TTTTTGTCATCTGTTCGCCTC-CCCTGTGTTT-GTG
CCTTAAGTGAGATCGGTTCCA---ATGCTCCAAGTAGTTGGAACTATGGCAATGCTCTAAAAAAGAATGTTGTCATGATG
TACGG--TATACTGAAAGTTCAGATTTATATTT----CTTGTTCATGCT-ACAGTATTGTTTAATGTTTGTTCTCCC---
-C----CTTTGTTCCCTCGTGATC--------------------------------------------------------
---------------------------AGTAACAAATATTTATCATAATGTAACTTTGATCCATGTACAAAAGTGGAGGT
TTTATGGAATCAA-GACACATGGAATGCTTGAGCATCAAGTCTGTTACATTGATGACAGTTCTTTCT-GTGCTTATATGT
AG--ATATCTGAATATGCCCATCTTTTGCAGGAGACAGATCATCTTACTGAGGGTCATGGACTTCAGATGCTACAACTTT
------------------------------------------CTGAAGATTACCATATTCTGTGCAATTTGGTTGGTAAT
GTCTTACATTTGTTTAAAGCGGGAGTACCATTTTATGGATCTCCAAAAATGATCATCTTGTGACTTTCCTTTCTGTGGTT
TCTTGGTGCTCTCTTGCAGTACTTTCCTTATTTCTTTTAGTCATCCGCATTGTGTGGCTAGCCAGTAAGGTGGTTGCAGC
TCTACTTTT-TTTTTC--TAAGTCAGGAGGTTGCATTGACATCG--------GCTATGATGATAGAAGGAATTAAGCAGC
CTTTCCACTTGCTGGACCACTTCAGCTCTGATGTTTGACATATTA---AATAACATATTATCCC----------------
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>SNPs
-----------------S------------------SSSSS--------------S-------S---SSS----------
--------------------------------------------S-----------S------------SS-S-SSSSSS
SSSSSSS-------------------SS--S----S-S--------S----------------------------S----
SS-SSSSSSSSSSSS--------------------------S-S-SS-SS------------------------------
------------------------SSSSSSSSSSSSSSS-----------------------------------------
S--S-S---------S-----------------------------S----------------------------------
-SS-SSSSSSS---------------------S-----------------------------------------------
---------------------------------SS-S-SSSSSSSSSSS-------------------------------
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--------------S------------------------------------SSSSSSSSSSSSSSS--------------
----------S-----------S---------------------------------------------------------
------------------------------------------------------S--------S----------------
-S-----------------------------------------------------------------S------------
------------------------S-------------------------------------------------------
--------------------------S-----------------------------------------------------
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------------------------------------S---------------------S---------------------
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-----------------------------------S--------------------------------------------
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----------------------------S---------------------------------------------------
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--------------------------------------S------------------------------------S----
-----------------S---------------------------S----------------------------------
------S------------------------------------------------------------------------S
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------------------------------------------S------------------------------S--SS--
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----------------------------------------------------------------------S---------
--------------------------------------------------S-----------------------------
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------------------------------------S-------------------------------------------
---------SS-----SS-------------------------------------------------S------------
------------------------------S-S-SS--------------------------------------------
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>forward_40
--------------------GACAATTGTCTCCACGCACG----------------------------------------
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>reverse_2076
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---------------------------------------------------------------------------GTTCT
TCCGAGTGCTATGGGA----------------------------------------------------------------
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---------------------------------------------------------------------------
