>input_sequence_66355
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----------------------------------------------------------------------------ATGG
AGCTCGTCTCATGCATTGCCATGTGCCTCTGGTTGGCCTTTCTCCTCCCTTCCCACGTAGCAGCCACGGCGCCAACCGGC
ATGGTAGAGCGGGAGACCAAGCAGCAGATTCTGGCGAGCATCCCGCCGCACTGGGAGGAGAACCCCGTGCTGTTCCTGAC
ATCGCCGTCCGGCAAGTACGCGGCCTACTTCATGCGCAGCCAGACCGCGCCGGGCGCGGGCGGCCTCAGGGCCGACTTCT
GCTACGTTGAGGTCCTCGACACCACGGCGCCGGGCGCGGAGGGCTGGAGCGTGTGGGAGTCGGAGTGCTTGGCGGTGAGC
ACCGTGAACACGTGCGCGCTCGTGTTCTCGTGGAAAGGGCTGGAGGTCTTCGACGGGAGCAACTCAGTGTGGCACACACA
CGACACAGAGTCGGACGACAACAACTTCCTCAAGACCCTGCAGCTGGTGGACGAGGGTGACATGCGCATCCTCGACAAGG
GCGGCGAGCTGGCGTGGAAGGCCAGCGACGAGCCGCGCGCCGCGCAACACTGCGGCATGCCTGGTTCGCCTGGCTTGGCC
CCGGCAATGCCGCCGTTCGCTGATCCGATCGGAAAGGGGAGTAGCAACTTGCCTTTCGGGCAAGATGAAGGAGGCATCGA
CGGCAACAGCTACGGTTCCGTCGGAGGAGTTGCACAACCCGAGCTGCCGTTGGC------------GCCGGGTGGCGTTG
GTGGGCAGGGGCAAGCTGTGGAGAGCGTGGGGGAGACTATGGGCTTCGGTAGCCAGCCATTGGTGGACAATAGCCCATAC
GACAGCGGTGCACCGGAGCGTCCATGGGCTGGAGTTGCTAATTTGGGTCTCAGCGTGGCAATTGTCATTGCCATGGGCCT
GGGTCTCTGA----------------------------------------------------------------------
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>chr4D_1_TraesCS4D01G226400
GCATCATGCAGAAATCATCCAGATCCAATCATGTGTGTAGCAGCGTTGCTAACCAAATCAACTGTTTGTGAGATAAGTCA
TTTAAGGAGTTCGAAATAGCAATTAATATGATGATATCATGTGGTGGAAGATTCCTCTACATGCATACATATG-------
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-------------------------------------------------------------CTCATATTGAAA---CACA
TGACTTGACTACTTATTTCCATAC--GTAGCCCACATATCTTTGCCCCTTATAAAATATATATACTACTAAGATTAAATT
GTGAATACTAATTCTATGCTAGATAAAT-TACAAAGAATATGCTTCACAGTTACAGGAAA-TAACTATAGCAAGATAAAC
AAAAAAATAGGACAATTGAGCAATTT-TTTGTACTAAGGTGCAAGGCTTTAAGATGGAAAACTATCACATGTGGAATCTT
CAACTATATAGTTATGCTCCTATTTATAAATATAACTAGATTAAATTAATAATATGAAAGAAAAAC-GAAACCTCTATAA
TTCTCCCCCACTCAACTC--AAAGAACAAAGACC--AAAAAAATAGCTCAAAAGGATCACACACAAAAAGGCCATAAACA
ACCAAGGAAGAATCCCAACTAATCTCAGATTGTACAAAGCTGATAGGATGGCTAAGATAGTTGACCAATATTAATAAATT
TTCTAACAAAGATTTAACAAAAT-TTTCGAGTATACTAAGCAATAGTGAAGCCTTTGAAAATAAATAAATGAGTATTAGG
ATATTGATTCATGGTCAAACTTGTTGCATGGAAGTCCAAATTCTGACGCTGGCCGATCGACTTTGTGCTGGTTTGCTTTA
CTAATCTCCCACTGATATATTGGATCCGGTGACTTCAACCACTCAAC-----------------------CCATGCACCA
T--CCATCGTTCTGTACCACCCCATT-------GCCAAGTCTCACTATAAAAAGCACA--CACCACCCCATGCACAATGC
AAGCACAAGCACAAACACCAGAACCCCACTTAGAAGTTGCATCTGACCAGGTAGCGAAACCCAAGCACCGGCGGCCATGG
AGCTCGTCTCATGCATTGCCATGTGCCTCTGGTTGGCCTTTCTCCTCCCTTCCCACGTAGCAGCCACGGCGCCAACCGGC
ATGGTAGAGCGGGAGACCAAGCAGCAGATTCTGGCGAGCATCCCGCCGCACTGGGAGGAGAACCCCGTGCTGTTCCTGAC
ATCGCCGTCCGGCAAGTACGCGGCCTACTTCATGCGCAGCCAGACCGCGCCGGGCGCGGGCGGCCTCAGGGCCGACTTCT
GCTACGTTGAGGTCCTCGACACCACGGCGCCGGGCGCGGAGGGCTGGAGCGTGTGGGAGTCGGAGTGCTTGGCGGTGAGC
ACCGTGAACACGTGCGCGCTCGTGTTCTCGTGGAAAGGGCTGGAGGTCTTCGACGGGAGCAACTCAGTGTGGCACACACA
CGACACAGAGTCGGACGACAACAACTTCCTCAAGACCCTGCAGCTGGTGGACGAGGGTGACATGCGCATCCTCGACAAGG
GCGGCGAGCTGGCGTGGAAGGCCAGCGACGAGCCGCGCGCCGCGCAACACTGCGGCATGCCTGGTTCGCCTGGCTTGGCC
CCGGCAATGCCGCCGTTCGCTGATCCGATCGGAAAGGGGAGTAGCAACTTGCCTTTCGGGCAAGATGAAGGAGGCATCGA
CGGCAACAGCTACGGTTCCGTCGGAGGAGTTGCACAACCCGAGCTGCCGTTGGC------------GCCGGGTGGCGTTG
GTGGGCAGGGGCAAGCTGTGGAGAGCGTGGGGGAGACTATGGGCTTCGGTAGCCAGCCATTGGTGGACAATAGCCCATAC
GACAGCGGTGCACCGGAGCGTCCATGGGCTGGAGTTGCTAATTTGGGTCTCAGCGTGGCAATTGTCATTGCCATGGGCCT
GGGTCTCTGAATTT----------------------------------------------------GGTACTTCCTCTAC
TCGTGGCCTCTTCGATTTTTCTCATGGGGATAGTGGCGGCATCTTCGATTTGTTATTTAACTTGGTGGTAT--ATTCTGG
CACAATAAGCCAGAGGATGTGTGGGTTTTTTA------------------------------------------------
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----------------------------------------------------------------------TTTTTTGAGT
TGAGGATGTGT----------GTGATGCTTTTCATGATTCTGATTGTATTTGTATTTAATATATAC--AAAAATGA-TTT
TTTCACCGTTATTTATTTCTTCTTGTAAAAAAG--TCAACATGCTGTGGTTTTTTCTTTATATTAATGATGTATTTCTTA
CGCATGTTGTAGCTCCAAGGAAGGCGCCAAAAAGGGCATGCCAGATTCTCCTCTCCGATGAGCTTATACTGCTAGTACTA
GGAGCAACAATGGGTGGATCCCTTGCCCAGATCATTGTGGCCGAAGGCCGGAGGAAGAGGAGAGATCCGAATGAGGGGGT
GAGGAGGAGACTTTGGAGATTGGGCAAGCGAACGCGGAATGGAAAGTGGTGTTTCTTACGCTCACATTGGTTGATACCGA
CATCTATCGAGCTATGCTTGTCTT-GACAAATACCTTCTTTTTTACAAAAGCCTCATCGAATACCTGATGAAACTGGTCG
GCGACATGCACTAGGCTTTGATCTCTCATCGACATAACCATGGTGTATGTGTGTGGCTTCAATGACTTGATCCACTTGTG
GCCCAACCCATTGTAGCTTCGAATTTGTGCTGGTGTGTTTGCGTTTGTGTTGTACACGTTGAGTTACTTAGAGCAAGCTC
AGTCTGCCCCCTCAAAACCTCATATCCTCTACTTTAGGAGCAAAATGCCCAAAATCTCACACCACTTCTACCCCATTTTT
TCCCTACATGTA-GGGAAAAGGACGGGGACCATTCCCCCTCTCTCCCACAAAAAAAATCAACTAACATGAATGTTCCCTG
CAACAACTAACTACCACCGCCATCTGTCGCCAGAGTCCGCCAGTGGCCTCAGGCATGGCGGAGGTAGCTAGAGTCGCCG-
>chr4D_1
GCATCATGCAGAAATCATCCAAATCCTATCGTGTGTGTAGCAGCGTTGCTAACCAAATCAACTGTTTGTGAGATAAGTCA
TTTAAGGAGTTCGAAATAGCAATTAATATGATGATATCATGTGATGGATGATTTCT------------------------
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--------------------------------------------CTACATGCATACATATGCTCATATTGAAA---CACA
TGACTTGAATACTTATTTCGATAC--GTAGCCCACATATCTTTGCCCCTTATAAAATATATATACTACTAAGATTAAATT
GTGAATACTAATTCTATGCTAGATAAAT-TACAAAGAATATGCTTCACAGTTACAAGAAA-TAACTATAGCAAGATAAAC
AAAAAAATAGGACAATTGCGCAATTT-TTTATACTAAGGTGCAAGGCTTTAAGATGGAAAACTATCACATGTGGAATCTT
CAACTATATAGTTATGCCCCTATTTATAAATATAACTAGATTAAATTAATAATATGAAAGAAAAAC-GAAACCTCTATAA
TTCTCCCCCACTCAACTC--AAAGAACAAAGACCAAAAAAAAAAAGCTCAAAAGGATCACACACAAAAAGGCCATAAACA
ACCAAGGAAGAATCCCAACTAATCTCAGATTGTACAAAGCTGATAGGATGGTTAAGATAGTTGACCGATATTAATAAATT
TTCTAACAAAGATTTAACGAAAT-TTTCGAGTATACTAAGCAATAGTGAAGCCTTTGAAAATAAATAAATGAGTATTAGG
ATATTGATTCATGGTCAAACTTGTTGCATGGAAGTCCAAATTCTGACGCTGGCCGATCGACTTTGTGCTGGTTTGCTTTA
CTAATCTCCCACTGATATATTGGATCCGGTGACTTCAACCACTCAAC-----------------------CCATGCACCA
T--CCATCGTTCTGTACCACCCCATT-------GCCAAGTCTCACTATAAAAAGCACA--CACCACCCGATGCACAATGC
AAGCACAAGCACAAACACCAGAACCCCAATTAGAAGTTGCATCTGACCAGGTAGCCAAACCCAAGCACCGGCGGCCATGG
AGCTCGTCTCATGCATTGCCATGTGCCTCTGGTTCGCCTTTCTCCTCCCTTCCCACGTCACAGCGACGGCGCCAACCGGC
ATGGTAGAGCGGGAGACCAAGCAGCAGATTCTGGCGAGCATCCCGCCGCACTGGGAGGAGAACCCCGTGTTGTTCCTGAC
ATCGCCGTCCGGCAAGTACGCGGCCTACTTCATGCGCAGCCAGACCGCGCCGGGCGCGGGCGGCCTCGGGGCCGACTTCT
GCTACGTTGAGGTCCTCGACACCACGGCGCCGGGCGCGGAGGGCCGGAGCGTGTGGGAGTCGGAGTGCTTGGCGTTGAGC
ACCGTGAACACGTGCGCTCTCGTGTTCTCGTGGAAAGGGCTGGAGGTGTTCGACGGGAGCAACTCAGTGTGGCACACACA
CGACACGGAGTCGGACGACAACAACTTCCTCAAGACCCTGCAGCTGGTTGACGAGGGTGACATGCGCATCCTCGACAAGG
GCGGCGAGCTCGCGTGGAAGGCTAGCGACGAGCCGCGCGCGGCGCAACACTGCGGGATGCCCGGCTCGCCCGGCCTGGTC
TCGGCAATGCCGCCCTTCGCGGAGCCGGCTGGGCATGGAAGCAGCAACCTGCCATTTGGACAGGAACCAGAAGGCA---A
CGGCGATGCC---------------GGTGTAGCACAGCCCATGCTGCCGCTGCCGGAAGCGGCAGGGTCCGGTGGTGTCG
TTGGGCAGGGACAGGCCCTGGAGGACGTGGGGCAGACGATTGGGTTTGGCAGCCAACCATTGGTGGACAACAGCCCATAC
GACAGTGGTGCACCGAAGC-------------------------------------------------------------
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>chr4D_48
-----------------------------------------------GCTAACTAAATCAACGGTTTGTGAGATAAGTCA
TTTTAGGA------------------------------------------------------------------------
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-------------------------------------------------------------------------------G
AAATGGCAATTGATATGATGAAATCGGTATGTGGTGGAAGATTCCTACATGCATAAATATGCTCATATTGAAAATTCACA
AGACTAGAAGACTTATTTCTAGACATGTTGCACACATATATTTGCCCCTTATAAAATATATATACTACATAGATTAAATT
GTGAATATTAACTCTATGCTAGATAAATATACAAAGAATATGCTGCACAGTTACAAGAAAATAACTATAGCAAGATAAAC
GAAAAATTAGGACAATTGCGCAA-TT-TTTATACTAAGGTGCAAAGCTTTAAGATGGAAAACTATCACACATTTAATCTT
CAACTATATAGTTATGCTCCTATTTATAAATATAACTAAATTAAATTAATA-TATGAAAGAAAAGC-GAAACCTCCATAA
TTCTCCCCCACTCAATTCAAAAAGAAGAAAGACCGAAAA---AAAGCTCAAAAGGATCACACACAAAAAGTCCATAAACA
AC--AGGAAGAATCCCAACTAATCACAGATTGTACAAAGCTGATCGGATGGCTAAGA-AGTTGACCAATATTAATAATTT
TTCTAACAAAGACTTAACAAAAT-TTTGTATACT-----------------CCTTTGAAAATAAAT-------TAGTAAG
ATATTGATTCATCGTTAAACTTGTTGCGTGGAAGTCCAAATTCTGACGCTGCCAGATCGACTTTGTGGTCGTTTGATTTA
CTAATCTCCCACTGATATATTGGATCCGG---------------------------------------------------
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>chr4D_48
-----------------------------------------------GCTAACTAAATCAACGGTTTGTGAGATAAGTCA
TTTTAGGAGTTTGG------------------------------------------------------------------
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-AATGGCAATTGATATGATGAAATCGGCATGTGGTGGAAGATTCGTACATGCATAAATATGCTCATATTGAAAATTCACA
AGACTAGAAGACTAATTTCCATACACGTTGCCCACATATATTTGCCCCTTATAAAATATATATACTACATAGATTAAATT
GTGAATATTAATTCTATGCTAGATAAATATACAAAGAATATGCTACACAGTTACAAGAAAATAATTATAGCAAGATAAAC
AAAAAATTAGGACAATTACGCAATTT-TTTATACTAAGGTGCAAAGCTTTAAGATGGAAAACTATCACACATGGAATCTT
CAACTATATAGTTATGCTCCTATTTATAAATATAACTAAATTAAATTAATA-TATGAAAGAAAAGC-GAAACCTCCATAA
TTCTCCCCCACTCAACTCAAAAAGAAGAAATACCGAAAA---AGAGCTCAAAAGGATCACACACAAAAAGTCCATAAACA
AC--AGGAAGAATCCCAACTAATCACAGATTGTACAAAGCTGATCGGATGGCTAAGATAGTTGACCAATATTAATAATTT
TTCTAACAAAGACTTAACAAAAT-TTT-----------------------------------------------------
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>chr4B_149
CTAATCTCCTAATGATACTACATTGGAACAGGTGACTTCAACCACTCAACTTTGCCTCTATACATCATCACGTACCACTC
CATTGCCAGGCTGCCTATAAAAGGCCTCCACCACCCAGAGAACAAGCACAAACACAAACACAACAAGCCCTGACCCCATA
CACATAAACTTCTGGGGAGACCACGAAATCCCATACCCAGCAGCCATGGAACTCCTCTCCTACGCTGCCATGTGCCTCTC
GCTGGCGTTTCTTCTCCATTCCTACGCCGCGGCGACGGCGCCAATCGGCATGCTTGAGCGGGAGACCAAGCAGCAAATCA
TAGCGAGCATCCCGCCGCACGGGCAGGAGAACCCCGTGCTATTCCTAACGTCGCCGTCCGGCAAGTACGCGGCGCACTTC
ATGCGCAGCGATACCGCGCCGGGCGCGGCCGGCCTCGGAGCCGACTTCTGCTACGTGGAGATCCTCGAGACCACCGAGCC
GGGCGCGGAGGGGCGGAGCGTGTGGGAGTCGGAGTGCTTGGCGGTGAGCACCATCAACACGTGCGCGCTCGTGTTCTCGT
GGAAAGGGCTGGAGGTGTTCGACGGGAGCAACTCTGTGTGGCACACGCACGACACGGAGTCGGACGACAACAACTTCCTC
AAGACCCTGCAGCTGGTTGACGAGGGTGACATGCGCATCCTCGACAAGGGCGGCGAGCTCGCGTGGAAGGCCAGCGACGA
GCCACGCGCGGCGCAACACTGCGGGATGCCCGGCTCGCCCGGCCTGGTCTCGGCAATGCCGCCCTTCGCGGAGCCGGCTG
GGCACGGAAGCAGCAACCTGCCATTTGGACAGGAACCAGAAGGTAATGGCAATGCCGGTGTAGCACAGCCCGTGCTGCCG
CTGCCGGAAGCGGCAGGGTCCGGTGGTGTCGCTGGGCAGGGGCAGGCCGTGGAGGACGTGGGGCAGACGATTGGGTTTGG
CAGCCAGCCATTGGTGGACAACAGCCCATACGACAGTGGTGCACAGAAGCATGGATGGAGCTTGCTAGGAATCGGAGTTG
CACTGGGTGTCAGCTCTGCCACTGTCATGGCCCTCGGTATCTGATTTGTGTACATGCGCTTGTGCAGCGGCGTGATGGCT
TTGGAGATTTCTCGAATTTCTTATTATTTCTGGCGCAATAAGCCAGGGATGTGTTGTGTGGACTCCTGACCAGCCGTGGC
GCCTTTTCTTGGCGTGGGCCTGCTGGTAGGATTGCATTGTATCTTGAGACCACGAAGTGTAATTTTTCGATTGTTCAAGT
TTGCTCGTCTAGACTATCAAACCTTGCTGTGCTCTCTTCTTCTTTCTAATAAACAATGGCCGATGGCCCTTCGATTGTTC
AAGCTTGCTTTGTAAACCATGAAGTGTGGTTTCTATCAGGCTGAGCCCATCTTAAGCTCTCACTGAATATTTGAGACATA
ATAACGTACTACCCTCTGTAACTTTGGGTCTTCTAAACTGTGATGACATATTGAATTAGATGCAAAATCTGATTTTTTTT
TTCTATGTCCAAAATCATCTAATATCGTGGGGATGGGCTATCGCCTGGGGTAGTTACCATCATGTCTCATACACTACCAT
GTGGTAGTATATATACTACTTTATCATTATAAGTATGTTGATATACTATCTAAGATATTTCAAACAAGTTATACAAAAAA
AATGCATGTAAGTTCATAATTTTTTTGTATATTTTGAAAATACCTTCATATTGGTACATATAAAACAATATACTAAGAAA
ATAGTGTACATACTACCTAAAAAGTAGGATATATACTACCAAAATGTTCTTATATACTATTCCCTCCATCACAAAATAAG
TGTATTAACTTTGTACTAATTTTAGTACAAAATTGTACTAAGCTTGAGACACTTATTTTGGGACGGAGGAAGTACTACAT
AGTACATATTATAAGTACATACTCTCGATTTTGGGACGGAGGAAGTACTACATACTCCCTCCGCCGAAAAAACTTGTCCC
TCAAATGAATGTATCTAGCACCAAGTTAGTGCTAGATACATTCATTTGAGGAACAAGCTTGGGACAAGCTTTTTCAGACG
CAGGGAGTACAACATACAAAACTCACATGAGGGTAACTACCCCTGTGTGGTAGGAAACATTTATCATATATATACCGAGT
TTTCTTATCTGGAGGGAAAAGTTGTTCTGTATTAATAAAACACGAATCTAGAGAGCAAAAAACTGAAGCTAAACACTCCA
TTGTTGCAAAGTGAGGTGCCAAGCACCAACATCAACAGTTTGCTTCTTTGAATATCCCATCGTCAATATGCTATTTTTTG
GATGTAGCACCCAATTGCATGTTCATACTTCTAAAAAGATGAAAAATAATTAATGTCGTTCCAATTCCCATGGAATTCCA
CGCTACACACAACTAGCTCTGATGATTTTGGTCATAGTGGAGAGTAACTTAGACTAGTAACATGCATATGTTACTAGTCT
ATGTTACTACCTTCATAGTGGGTAGTATCATATATGTGGTAACATAAATGTCTTCATTTATTACTTTGTAGACTCATTTT
GCATTGGGAAGCGCTATGTGATGGTAACATATTATGTTACTCTATTTGCCTCTCTCCTTATTAACTACTTGCCATCTCAT
TATTTTTACTTATGTGGCATCTAAGTTACTACCTATGTTACTCCCACTATGACCAGCCTAACATGGTTAATCTCCGTTGT
AAAGTTTCTTTTTACTATCATAACACATCATTTATCACCAAAGAACCGGTCTTAAAGATCCTGCCCAAGAAGTTACATAT
ATGTTCATACTTATAATGTGGCACCTAGTGGCAATGGTTTTTTAGTCCAAACATAATATCATGGGATATTGTTTTAAGCC
CTCATCGAGACGAACTCACCGGTGAAGATAGATCGCTAACCAAATCAACAGTTTGTGAGATTCGTCATTTCAGGAGTTTG
AAATGGCAATTGATATGATGAAATCGGCA---------------------------ATGTGCTCATATTGAAAGTTCACA
AGACTTGAAGACTAAGTTCCATACACGTTGCCCACATATATTTGCCCCTTATAAAATATATATACTGCACAAATTAAATT
GTGAATATTAATTCTATGCTAGATAAATATACAAAGAATATGCTACACAGTTACAAGAAAATAATTATAGCAAGATAAAC
GAAAAATTAGGACAACTGCGCAA-TTGTTTATACTAAGGTGCAAAGCTTTAAGATGGAAAACTATCACACATGGAATC--
------TATAGTTATGCTCCTATTTGTAAATATAAATAAATTGAATTAATA-TATGAAGGAAAAAATGAAACCTCTATAA
TTCTCCTCCACTCAACTCAAAAAGAAGAAAGACCAAAAA---AAAGCTCAAAAGGATCACACACAAAAAGCCCATAAACA
AC--AGGAAGAATCCCAACTAATCACAGATTATACAAAGCTGATCTGATGGCTAAGATAGTTGACCAATATTAATAGTTT
TTCTAACAAAGATTTAACAAAAAGTTAGTATAGT-----------------CCTTTGAAAATA-----------------
ATATTGATTCATCGTCAAACTTGATACGTGGAAGTCCAAATTCTGACGCTGTCAGATCGACTTTGTGCTCGTTTGCTTTA
CTAATCTCCCACTGATATATTGGATCCGGTGACTTCAACCACTCAACGAGCGAGGTGTTCCACCAGTCAACCATGCCTTC
GCACCATCGTCATGTACCACTCCC-------TTGCCAAATCCCCCTATAAGAAGCACACGCACCACCCCATGCACAATGC
AAGCACAAGCACAAACACCACAACCCCACTTGGAAGTTTCATCTGGCCAGGTAGCGAAACCCAAGCACCAGTAGCCATGG
AGCTCGTCTCATGCATTGCCATGTGCCTCTCGCTCGCCTTTCTCCTCCCTTCCCCCGTCGCAGCGACGGCGCCAACCGGC
ATGGTAGAGCGGGAAACCAAGCAGCACATTCTGGCCAGCATCCCGCCGCACTGGGAGGAGAACCCCGTGTTGTTTCTCAC
ATCGCCGTCCGGCAAGTACGCGGCCTACTTCATGCGCAGCCAGACCGCGCCGGGTGCGGGCGGCCTCGGGGCCGACTTCT
GCTACGTGGAGATCCTCGACACCACCGAGCCGGGCGCGGAGGGGCGGAGCGTGTGGGAATCGGAGTGCTTGGCGGTGAGC
ACCGTGAACACGTGCGCGCTCGTGTTCTCGTGGGAAGGACTGGAGGTGTTCGACGGGAGCAACTCTGTGTGGCACACGCA
CGACACGGAGTCGGTCGACAACAACTTCATCAAGACCCTGCAGCTGGTGGACGAGGGTGACATGCGCATCCTCGACAAGG
GCGGCGAGCTGGCGTGGAAGGCCAGCGACGAGCCGCGCGCCGCGCAACACTGCGGCATGCCCGGCTCGCCTGGCTTGGCC
CCGGCAATGCCGCCGTTCGCTGATCCAATCGGAAAGGGGAGCAGCAACCTTCCATTTGGGCAAGATGAAGGGGGCA---A
CGGCAACAGCTACGGTTCCGTCGGAGGAGTTGCACAACCCGAGCTGCCGTTGGC------------GCCGGGTGGCGTCG
GTGGGCAGGGGCAAGCTGTGGAGAGCGTGGGGGAGACTATGGGCCTCGGTAGCCAGCCACTGGTGGACAATAGCCCATAC
GACAGCGGTGCACCGGGGCGTCCATGGGCTGGAGTTGCTAATTTGGGTCTCAGCGTTGCAATTGCCATTGCCATGGGCCT
GGGTCTCTGAATTT----------------------------------------------------GGTACTTCCCTCTT
G-GTGGCTTCTTCGATTTTTCTCATGGGGATACTGGTGGCATCTTCGATTTGTTATTTAACTTGGTGGTATCTATTCTGG
CGCAATAAGCCAGAGGATGTGTGGG-TTTTTA------------------------------------------------
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----------------------------------------------------------------------TTTTTTGAGT
TGAGGA-GTGTGTGGTTTGAAGTGATGCTTTTCATGATTCTGATTGTATTTGTATTTAATATAT--TGAAAAATGATTTT
TTTCATC-TTATTTATTTCTTCTTGGAAAAAAG--TCAACATGCTGCAGTTTTCTCTTTATATTAATGATGTATTTCTTA
CGCATATTGTAGCTCCAAGGAAGGCACCGAAAAG----------------------------------------------
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-----------------------------------------GGTGTGTGTGTGTGGCTTCAACGACTTGATCCACTTGTG
GCCCAACCCATTGTAGCTTTGAATTTGTGCCAGTGTGTTTGCGTTTGTGTTGTACACGTTGAGTTGCTT-----------
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>chr4A_406
CTAATCTCCTAATGATGCTACATTGGAACAGGTGACTTCAACCACTCAACTTTGCCTCTAATACATCATCACGTACCACT
CCATTGTCATGCTCCCTATAAAACGCCTCCACCACCCAGTGGACAAACACAAACACAAACACAAACACAAACACAAACAC
AACAAGCTTCTAGGGAGACCACGAAGTCCTATACCCAGTAGCCATGGGACTCATCTCCTACGCTGCCATGTGCCTCTCGC
TGGCGTTTCTTCTCCATTCCTACGCCGCCGCGACGGCGCCAACCGGCATGCTAGAGCGGGAGACCAAGCAGCAAATCATA
GCGAGCATCCCGCCGCACGGGCAGGAGAACCCCGTGCTATTCCTGACGTCGCCGTCCGGCAAGTACGCGGCGCACTTCAT
GCGCAGCCAGACCGCGCCGGGCGCGGGCGGCCTCGGCGCCGACTTCTGCTACGTGGAGATCCTCGACACCGCGGAGCCGG
GCGCCGAGGGGCGGAGCGTGTGGGAGTCGGAGTGCCTGGCGGTGAGCACCGTGAACACGTGCGCGCTCGTCTTCTCGTGG
AAAGGGCTGGAGGTGTTCGACGGGAGCAACTCGGTGTGGCACACGCACGACACGGAGTCGGACGACAACAACTTCCTCAA
GACCCTGCAGCTGGTCGACGAGGGTGACATGCGCATCCTCGACAAGGGCGGCGAGCTCGCGTGGAAGGCCAGCGACGAGC
CGCGCGCGGGGCAACACTGCGGGATGCCCGGCTCCCCCGGCCTGGTCTCGGCAATGCCGCCCTTCGCGGAGCCGGCTGGG
CACGGAAGCGGCAACCTGCCATTTGGACAGGAACCAGAAGGCAATGGCAATGCCGGTGTAGTACAGCCCGCGCTGCCGCT
GCCGGAAGCGGCAGGGTCCGGTGGTGTCGCTGGGCAGGGGCAGGCCGTGGAGGACGTGGGGCAGACGATTGGATTTGGCA
GCCAGCCATTGGTGGACAACAGCCCATACGACAGTGGTGCACCGAAGCATGGATGCAGCTTGCTTGGATTTGGTGTTGCA
CTGGGTGTCAGTGCTGCCATTGCCATGGCCCTCGGTCTCTGATCGAGGGTGTGCATGCGCTCTTGCGGCGTGGTGGCGTT
GGTGGTTTGTCGAATTTCTTGTTATTATTTCTGGCGCAATAAGCCAGGGATGTGTTGTGAACTCCTGACCAGCCGTGGCG
CTTTTTCTGGGCGTGGGCCTGCTGGTAGGATTGCATTGTATCTTGAGACCACGAAGTGTAATTTTTCGATTGTTCAAGTT
TGCTTTGTAAACCACGAAGTGTGGTTTCTATCAGGCTGAGCCCATCTTAGGCTCTCACTGAATATTTGAGACATAATAAC
GTACTACCCTCTGTAACTTTTTATAAGGATCCCTTTTTATATGACGTTTTTAAAGTCTATGACAGTGTAAAAAAAACGTC
TAATATTAAGTTATAGAAAGAGTATTAAATAAGTAGGATATTTCACTTAAATAATGTGTTGCTCAGTCTTAAATTGGGTC
CTCTAAACTGTGATGACATATTGAATTAGATGCAATCTAATTTTTCGATATCACAAAATCATCTAATATCATGGGGATGG
GCTAATGACCCACCAAGATTAGAGATCGGATCTTCGATTCTATGTACGCACTAACCTGAGATTCAGAGATTTCTTATCAG
GAGGGAGAGTTGCTCTGTATTAATAGAACACGAGTCTAGAGAGCAAGAAACTGAGCCAAACACTCCATCGTTGCAAAGTG
AGGTGCCGATCACCAGCATCAACAGTTTGCTTCGTCGAATATCCCTCGTCAATATGCTATTTTTTGGAGGTAGCACACAA
ATATATGTTCATACTTCTATAAAGGTGAAAAATAATGAATGTTGTTCCAATTCCCATGAAATTCCATGCTACACACAACT
AGCTTTGATAATTTCTTAACATGGTTAATCTCCATTGTAAAGTTTCTTTTTACTATCATAACACATCATTTATCACCAAA
GAACTGGTCTTAAAGATCCTAGCTGAGAAGTTACATATATGTTCATACTTATAATGTGGCACCTAGTGGCAATCAATTTT
TTTAGTCCAAACAAAATATCATGGGGTATTGTTTTAAGCCTTCGTCGAGACGAACTCACTGGTGAAGATAGATCCTTAAC
TAAATCAACGGTTTGTGAGATAACTCATTTTAGGAGTTTGAAATGGCAATTGATATGATGAAATCGGTATGTGGTGGAAG
ATTCTTATATGTATACATATGCTCATATTGAAAATTCACAAGACTTGAAGACTAATTTCATACACGTTGCCCACGCCCCT
TGTAAAATATATATACTACATAGATTAAACTGTGAATATTAATTCTATGCTAGATAAATACACAAAGAATATGCTACACA
GTTATAAGAAAATAACTATAGCAAGATAAACGAAAAATTAAGACAATTGCACATTTTTTATA------------------
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--------------------------------------------------------------------------AATA--
------TATAGTTATGCTCCTATTTATAAATATAACTAAACTAAATTAATA-----------------------------
-------CCACTCAACTCAAAAAGGAGAAAGACC-AAAA---AAAGCTCAAAAGGATCACACACAAAAAGCCCATAAACA
AC--AGGAAGAATCCCAACTAATCACAGATTGTACAAAGCTGATCGGATTGCTAAGATAGTTGACCAGTATTAATAATTT
TTCTAACAAAGACTTAACAAAAT-TTTGTATACT-----------------CCTTCGAAAATAAAT-------TAGTAAG
ATATTGATTCATTGTTAAACTTGTTGAGCGGAAGTCCAAATTCTGACGCTGTCAGATCGACTTTGTGCTCGTTTGCTTTA
CTAATCTCCCACTGATATATTGGATCCGGTGACTTCAACCACTCAACGAGCTAGGTGTTCCTCCAGTCAACCATGCCTTC
G--CCATCGTCATGCACCACTCCATAT-------CCAAATCTCCCTATAAGAAGCACA--CAACACCCCATGCACAATGC
AAGCACAAGCACAAGCACAAACAC-------AGAAGCTGAATCTGACCAGGTAGCGAAACCCAAGCA----TAGCCATGG
AGCTCGTCTCATGCATTGCCATGTGCCTCGCGTTCGCCTTGCTCCTCCCTTCCCACGTCACAGCGACGGCGCCAACCGGC
ACGGTAGAGCGGGAGACCAAGCAGCAGATTCTGGCGAGCATCCCGCCGCACTGGGAGGAGAACCCCGTGTTGTTCCTGAC
GTCGCCGTCCGGCAAGTACGCCGCCTACTTCATGCGCAGCCAGACCGCGCCGGGCGCGGGCGGCGTCGGGGCCGACTTCT
GCTACGTTGAGGTCCTCGACACCACGGCGCCGGGCGCGGAGGGCCGGAGCGTGTGGGAGTCGGAGTGCCTGGCGGTGAGC
ACCGTGAACACGTGCGCGCTCGTCTTCTCGTGGAAAGGGCTGGAGGTGTTCGACGGGAGCAACTCGGTGTGGCACACGCA
CGACACGGAGTCGGACGACAACAACTTCCTCAAGACCCTGCAGCTGGTGGACGAGGGTGACATGCGCATCCTCGACAAGG
GCGGCGAGCTGGCGTGGAAGGCCAGCGACGAGCCGCGCGCCGCGCAACACTGCGGCATGCCCGGCTCGCCTGGCTTGGCA
CCGGCAATGCCGCCGTTCGCCGGTCCGATCGGAAAGGGGAGCAGCAACTTGCCATTCGGGCAAGATGAAGGAGGCATCGA
CGGCAACAGCTACGGTTCCGTCGGAGGAGTTGCGCAGCCCGAGCTGCCGTTGGC------------GCCGGGTGGCGTTG
GTGGGCAGGGGCAAGA---GGAGAGCGTTGGGGAGACCATGGGCCTCGGTAGCCAGCCACTGGTGGACAATAGCCCATAC
GACAGCGGTGCACCGGAGCGTCCATGGGCTGGAGTTGCTAATTTGGGTCTCGGCGTTGCAATTGCCATTGCCATGGGCCT
GGGTCTCTGAATTT----------------------------------------------------G-------------
-----------------------------ATACTGGTGGCATCTTCGATTTGTTATTTAACTTGGTGGTATCTATTCTGG
CGCAATAAGCCAGAGGATGTGTGGG-TTTTATTTTTTCGGAAATGTTAACGCCCACATGTGTGGGCGTTTGCACACCACT
CGCACACCTTCATCATCACTCATTTTGCCATGTATGAATAGATGATATCAGCAGAATTTTTTTTGGTTTTCGGCTTAAAA
ATGTTGTATCTCTTAAATAAAAAGTGAACTAAAAAATCCGCTTTTACCATTAAATCCATCTCGACGAGATCTTCAAAACT
AGACTCCATGTTGATATGTTTCGACGAATTTTTTTTTGTCAGAAATTGCCACGATGTTTACACTGCAGTTGCCATCGGGC
TTAAACTAAAGTTGCCATGTGGCAATTTTAGTTTGTAGATCATGGCAATTTTAGTATTTTGATGATGGCAACTCCAGTAG
TTTGACCATGAAAATTATTTTTTGTATGAACCATGACAATTTTACGTGCATGTATCATGGCAATTTTAGTTTATGGTTCA
TGGCAAGTCTAGTTTCTTAATTCCCTGTTTTATAAATGTCAAAATTTACTTTTAAATGTAGAAAAAAATAGCTAAAACAT
ATCATGGCAACTTCAATGTAAACATCATGGCAATTCATATGCAATAGATATGTCAACTTTTAATCCAAAAAAATTTTCAT
CAAAACATATCAACATGGGATCTAATTTCGAAGATCTCATCGCGAGAGATTTAATGGTGAAAACGGATTTTCAATCGGAT
TTTTCGTTTAAGAGATAAAACATTTTAAAAACTGAAAATCCAAAAAGATTCCTACATACATGCATGCGATGACGTGACAA
TCTGTTTACATTAGAGACGTGTGGTACGTCTCCCTTCCTGCCACACGTGTGGCAGTTAGCGCGACCCTATTTTTTTGAGT
TGAGGATGTGTGTGGTTTGAAGTGATGCTTTTCATGATTCTGATTGTATTTGTATTTAATATAT--TCAAAAATGATTTT
TTTCAGCGTTATTTATTTCTTCTTGTAAAAAAG--TCAACATGTTGTCGTTTTTCCTTTATATTAATGATGTATTTCTTA
CGCATGTTGTAGCTCTGAGGAAGGCGCTAAAAAGGGCATGCCAGATTCTCCTCTCCGACGAGCTTACACTAGTAGTACTA
GGAGCAACAATGGGTGGATCCCTCACCCAAATCATTGTGGCCGAAGGCCGGAGGAAGAGGAGAGATCCGAATGAGGGGGT
GAGGAGGAGACTTTGGAGATTGGGCAAGGGAACGCGGAAGGGAAAGTGGTGTTTCTTACGCGCACATTGGTTGATACCGA
CATCTATCGAGCTATGGTTGTCTCAGACAAATACCTTCTTTTT-ACAAAAGCCTTGTTGAATACCTGATGAAACTGGTCG
GCGACATGCACTAGGCCTTGATCTCTCATCGACATAACCATGGTGTATGTGTGTGGCTTCAATGACTTGATCCACTTGTG
GCCCAACCCATTGTAGCTTCGAATTTGTGCTAGTGTGTTTGCGTTTGTGTTGTACACATTGAGTTACTTAGAGCAAGCTC
AGTCCGCCCCCTTAAAACCTCATATCCTCTACTTTAGGGGCAAAATGCCCAAAATCTCACACCACTTCTACCCCATTTTT
TCCCTACATGCAGGGGAAAAGGACGGGACCCCCCTCATCTCTCTCATA-AAAAAAAATCAACTAACATGAATGTTCCCTG
CAACAACTA----CCACCGCCATCTGTCGCCGGAGTCCGCCGGTGGCCTCAGGCATGGCGGAGGTAGCTAGAGATCGCCG
>chr4D_719
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ATATTGATTCATTGTTAAACTTGGTGAGTGGAAGTCCAAATTCTCACGCTGTCAGATCGACTTTGTGCTCGTTTGCTTCA
CTAATCTCCCACTGATATATTGGATCCGGTGACTTCAACCACTCAACGAGCGAGGTGTTCCACCAGTCAACCATGCCTTT
G--CCATCGTCATGTAGCACTCCATTTCCATTTGCCAAATCTCCCTATAAGAAGCACA--TACCACCCCATGCACAATGC
AAGCACAAGCACAAGCACCAGAACCCCACTTAAAAGTTGCATCTGACCAGGTAGCGAAGCACAAACACAAGTAGCCATGG
AGCTCGTCTCATACATTGCCATGTGCCTCTCGTTCGCCTTTCTCCTCCCTTCCCATGTCACGGCGACGGCGCCAACCGGC
ATGGTAGAGCGGGAAACCAAGCAGCAGATTCTGGCGAGCATCCCGCCGCACTGGGAGGAGAACCCCGTGCTGTTCCTGAC
ATCGCCGTCCGGCAAGTACGCGGCCTACTTCATGCGCAGCCAGACCGCGCCGGGCGCGGGCGGCCTCGGGGCCGACTTCT
GCTACGTTGAGGTCCTCGACACCACGGCACCGGGCTCGGAGGGCCGGAGCGTGTGGGAGTCGGAGTTCTTGGCGGTGAGC
ACCGTGAACACGAGCGCTCTCGTGTTCTCGTGGAAAGGGCTGGAGGTGTTCGACGGGAGCAACTCAGTGTGGCACACACA
CGACA--GAGTCGGAAGACAACAACTTCCTCAAGACCCTGCAGCTGGTTGACGGGGGTGACATGCGCATCCTCGAAAAGG
GCGGCGAGCTGGCGTGGAAGGCCAGCGACAAGCCGCGCGCCGCGCAACACTGCGGCATGCCCGGTTCTCCTGGCTTGGCA
CCGGCAATGCCGCCCTTCGCCGGTCCGATCGGAAAGGGGAGCAGCAGGTTGCCATTCGGGCAAGATGAAGGAGGCATCGA
CGGCAACAGCTACGGTTCCGTCGGAGGAGTTGCACAACCCGAGCTGCCGTTGGC------------GCCGGGTGGCGTTG
GTGGGCAGGGGCAAGCTGTGGAGAGCGTGGGGGAGACTATGGGCTTCGGTAGCCAGCCATTGGTGGACAATAGCCCATAC
GACAGCGGTGCACCGGAGCGTCCATGGACTGGAGTTGCTAATTTGGGTCTCAGCGTTGCAATTGCCATTGCCCAGACCCT
GGGTCTCTGAAAATTTGGTAGTTCCCTCATGGGGATACTGGTGGCCTATTCGATTTTTCTCATGGGG-------------
-----------------------------ATACTGGTGGCATCTTCGATTTGTTATTTAACTTGGTGGTATCTCTTCGGG
CGCAATAAGCCAGAGGATGTGTGGG-TTT-TA------------------------------------------------
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----------------------------------------------------------------------TTTTTTGAGT
TGAGGAGGTGTGTGGTTCGAAGTGATGCTTTTCATGATTCTGACTGTATTTCTATTTAATATATATTGAAAAATGA-TTT
TTTCACCATTATTTATTTCTTCTTGTAAAAAAGAGTCACCATGCTGTGGTTTTCTCTTTATAATTAATGA----------
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>chr4D_875
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---------------------------CCATTTGCCAAATCTCCCTATAAGAAGCACA--TACCACCCCATGCACAATGC
AAGCACAAGCACAAACACCAAAACCCCACCTAGAAGTTGCATCTGACCAGGTAGCGAAGCCCAAACACAAGTAGCCATGG
AGCTCGTCTCATACATTGCCATGTGCCTCTCGTTCGCCTTTCTCCTCCCTTCCCACGTCACAGCGACGGCGCCAACCGGC
ATGGTAGAGCGGGAGACCAAGCAGCAGATTCTGGCGAGCATCCCGCCGCACTGGGAGGAGAACCCCGTGTTGTTCCTGAC
ATCGCCGTCCGGCAAGTACGCGGCCTACTTCATGCGCAGCCAGACCGCACCGGGCGCGGGCGGCCTCGGGGCCGACTTCT
GCTACGATGAGGTCCTCGACACCACGGCGCCGGGCGCGGAGGGCCGGAGCGTGTGGGAGTCGGAGTGCTTGGCGGTGAGC
ACCGTGAACACGTGCGCGCTCGTGTTCTCGTGGAAAGGGCTGGAGGTGTTCGACGGGAGCAACTCAGTGTGGCACACACA
CGACACAGAGTCGGACGACAACAACTTCCTCAAGACCCTGCAGCTGGTGGACGAGGGTGACATGCGCATCCTCGACAAGG
GCGGCGAGCTTGCGTGGAAGGCCAGCGACGAGCCGCGCGCCGCGCAACACTGCGGCATGCCCGGTTCTCCTGGGTTGGCA
CCGGCAATGCCGCCCTTCGCCGGTCCGATCGGAAAGGGGAGCAGCAGGTTGCCATTCGGGCAAGATGAAGGAGGCATCGA
CGGCAACAGCTACGGTTCCGTCGGAGGAGTTGCACAACCCGAGCTGCCGTTGGC------------GCCGGGTGGCGTTG
GTGGGCAGGGGCAAGCTGTGGAGAGCGTGGGGGAGACTATGGGCTTCGGTAGCCAGCCATTGGTGGACAATAGCCCATAC
GACAGCGGTGCAACGGAGCGTCCATGGACTGGAGTTGCTAATTTGGGTCTCAGCGTTGCAATTGCCATTGCCCTGACCCT
GGGTCTCTGAAAATTTGGTAGTTCCCTCATGGGGATACTGGTGGCCTATTCGATTTTTCTCATGGGG-------------
-----------------------------ATACTGGTGGCATTTTCGATTTGTTATTTAACTTGGTGGTATCTCTTCCGG
CGCAATAAGCCAGAGGATGTGTGGG-TTT-TA------------------------------------------------
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----------------------------------------------------------------------TTTTTTGAGT
TGAGGATGTGTGTGGTTCGAAGTGATGCTCTTCATGATTCTGATTGTATTTGTATGTAACATATATTGAAAAATGATTTT
TTTCACCGTTATTTATTTCTTCTTGTAAAAAAGAGTCATCATCCTGTGGTTTTCTCTTTATAATTAATGA----------
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>chr4D_998
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-------------------------------------------------------------------------GCCATGG
GACTCCTCTCCTACGCTGCCATGTGCCTCTCGCTGGCGTTTCTTCTCCAATCCTACGCCGCCGCGACGGCGCCAACCGGC
ATGCTTGAGCGGGAAACCAAGCAGCAAATCATAGCGAGCATCCCGCCGCACGGGCAGGAGAACCCCGTGCTATTCCTGAC
GTCGCCGTCCGGCAAGTACGCGGCGCACTTCATGCGCAGCCAGACCGCGCCGGGCGCGGGCGGCCTCGGAGCCGACTTCT
GCTACGTCGAGATCCTCGACTCCACGGAGCCCGGCGCGGAGGGGCGGAGCGTGTGGGAGTCGGAGTGCTTGGCGGTGAGC
ACAGTCAACACGTGCGTGCTCGTGTTCTCGTGGAAAGGGCTGGAGGTGTTCGACGGGAGCAACTCCGTGTGGCACACGCA
CGACACGGAGTCGGACGACAACAACTTCCTCAAGACCCTGCAGCTGGTTGACGAGGGTGACATGCGCATCCTCGACAAGG
GCGGCGAGCTCGCGTGGAAGGCCAGCGACGAGCCGCGCGCGGCGCAACACTGCGGGATGCCCGGCTCGCCCGGCCTGGTC
TCGGCAATGCCGCCCTTCGCGGAGCCGGCTGGGCACGGAAGCAGCAACCTGCCATTTGGACAGGAACCAGAAGGCACT--
-GGCAATGCC---------------GGTGTAGCACAGCCCACTCTGCCGCTGCCGGAAGCGGCAGGGACCGGTGGTGTCG
CTGGGCAGGGGCAGGCCGTGGAGGACGTGGGGCAGACGATTGGGTTTGGCAGCCAACCATTGGTGGACAACAGCCCATAC
GACAGTGGTGCACCGAAGC-------------------------------------------------------------
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>SNPs
---------------------S--------S-------------------------------------------------
-------------------------------------------S------------SS---SS--S---S-SS-------
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--------S-----------------------------------------------------------------------
-------------------------------------------------------S------------------------
------------------S-----------S-------------------------------------------------
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-------------------------------------------S------------------------------------
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----------------------------------------------------------S-----S---------------
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-------------------------------------------------------------------S------------
--------------------------------------------S-----------------------------------
-----------------------------------------------S--------------------------------
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-------------------------------------------------------------S------------------
-----------------------------------------S-----------S--------------------------
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--------------------------------------------------------S-------S---------------
---------------------------------------------------------------------------SSSSS
SS-----S------------------------S---S-------------------------------------------
-S-----------------------S------------------------------------------------------
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-----------------------------------------------------------------S--------------
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----------------------------------------------------------S-------S---SS--------
-----------------------SS----S--------------------------------------------------
----------------------------S----------S---------------------S------------------
----------------S------S-------------------S----------SS-S----------------------
----------------S---------------------------------------------------------------
-------------------------------S------------------------------------------------
----S-------S-------------------------S-----------------------------------------
----------S----------------SS--SSSS-SS-------SS-S-------------------------------
---------SSSS------------------S---------S-------------------------------SSSS-S-
>forward_22
GCATCATGCAGAAATCATCCAG----------------------------------------------------------
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>reverse_4876
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---------------------------------------------------------------------------TCTAC
TCGTGGCCTCTTCGA-----------------------------------------------------------------
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