>input_sequence_66354
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------------------------------------------ATGACGGAGAGCGCGGGATCGCAGCGTAGGAAGGGAAA
AGAGATGGCGGAGGATCTTCTGGCAAGGCTCACTTTGCAGGAAGAGGAGGAGGATGATTTCGTCTGGGAGGAAGAGTTGA
CTGACAGTTTGGAACCTGCAAAGTGGTTGGCGATTGCCCGCGTCCACACGGCGAAATCGTTCAGCCCTAATGCTCTCTAC
GGGGATATGCGGGCGGCCTGGAACCCAGCTAGACCGGTGGTGTGGAGAAAGATCAAGGAGAACCTCTTCACGGCGCAATT
TGGATGTCTT-GGTGACTGGAATAAGGCCATGCTTGAGGGGCCATGGTTGTTCAGAGATCAGGCGGTGATCATGGAGGAA
TATGATGGCTTTAAAAACCCTGATTCGTTTAAACTCAACAAGCTGGCTGTTTGGGCTCAGATCCACCGGCTACCGAACAA
CTTTTTGATTGAACCAGCAGTGAGGGGACTGGCCTCCAGGATCGGCGAGGTGGAAGAAGTACAACTGAAACTGCCTGCAG
GTTACTTTGGGGAGTTTGTCAGGGTGAAGATAAAGATAGATATCAACGCCAAGATCAAACATTTCGTCACCGGAAAAAAG
GGGGATGAGAGGATCAAATATCAAGGTAAGTATGAGAAGCTGCCTATCTTCTGCTATAATTGTGGGGAATTTGGTCATTG
GCATGAGGAATGCGGAGATGGAGAGCATGATGAGATGTCTTTCGAGTGGGGCGATTTTCTCTTTGCTGATAATGTTCGCT
TCAGGCCCTTTGGCCGGGGGAACCCTGCTCCGCAGCGTGGTAGGGGTGGCCCGGGGATGGGCGGTCGTGGGAGAGGACGT
GAACAGTATAACCCAGATCGTAGCTGGCGCTTTAACGCTCAGTAG-----------------------------------
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>chr4D_1_TraesCS4D01G045000
GATTTCACTTTGTGCATAGACTTTGTCTAGGGCTCATGGGCCCGGTCGATGGCCGGAGCCGGTGATGACGATGCCCTTAT
CATCGTTTCCTTCATAAAGGCATCATCGAGGTGAAGCTTCCAACTCCACTCAATACCTTCGGGGGAAACCCTAGATCAGA
TGATCGGATGTTGGCGGCAATCATGTGTCGTAACCCCCTTGGGGGAGGCATTCTTGGAGGTGCACTCGGCTTCGCGGGAC
CAGCGGACGGCTTCTTTGGTGGAGCGGTGCTTCATCCAT-ACATTGATGGCGACGGATCTTGACGGCGTGGCGCAGTGCA
GATTCGGAGTTTGATGTGGGAGCATGGACTCGTGCAGGAGGACGACGCTGTTTGGCGTCGTGGTGGCGTCGATGGCAGTG
AGACCTGGCACGGTAGATGCAATAGTACAGATCTGAAGATGGACTCGTGGCAGGTGGCCGCGGCGGCCTCATACCCGGCA
GGCGTCCTGGTTGAGGAGTGTGCCGGACTGGTAGGTGCCCCATACCAGGCAGGCGTCCTGGTTGGGACCTCAGGTCTTAG
ATGTTTAGGTTTGGCTGCGATGTCTGTTTGGTATTAGGCCC-AGGCTATCAGCGCCCCTTCATCAATTGGATAGATGTAG
CGACTGTTGTTGCTTAGACGGTGGCTTCAGTCTTGCTGTTGTATGACTTTATAAAGTTTTGTGAGAATAATTAATAAAGT
GGCCGCATGCATCGCCCAGATGCAGAGGCCGGGGGTCATCCTCCTTTAAAAAAAAAATGGGCCTCAATTGAGTTGAAGAT
CATTGTGTGACTTGCGTGATAAACCAACTGAGCCAACTAACGATTGTGTAGGGAGCCGCTATCTTCCCCTAGGAGAAAAA
CCCTAGGGTTTCCATCTCTTCCGGAGATCTACGCCGGAATCTACCTTTTGGCCCGTCGTGCTCGCGCACCCCCGGCTGCC
ATAGACTCCGCGCTGTCTCCAGCCGCTGGTCGATCGCCGAGGATGACGGAGAGCGCGGGATCGCAGCGTAGGAAGGGAAA
AGAGATGGCGGAGGATCTTCTGGCAAGGCTCACTTTGCAGGAAGAGGAGGAGGATGATTTCGTCTGGGAGGAAGAGTTGA
CTGACAGTTTGGAACCTGCAAAGTGGTTGGCGATTGCCCGCGTCCACACGGCGAAATCGTTCAGCCCTAATGCTCTCTAC
GGGGATATGCGGGCGGCCTGGAACCCAGCTAGACCGGTGGTGTGGAGAAAGATCAAGGAGAACCTCTTCACGGCGCAATT
TGGATGTCTT-GGTGACTGGAATAAGGCCATGCTTGAGGGGCCATGGTTGTTCAGAGATCAGGCGGTGATCATGGAGGAA
TATGATGGCTTTAAAAACCCTGATTCGTTTAAACTCAACAAGCTGGCTGTTTGGGCTCAGATCCACCGGCTACCGAACAA
CTTTTTGATTGAACCAGCAGTGAGGGGACTGGCCTCCAGGATCGGCGAGGTGGAAGAAGTACAACTGAAACTGCCTGCAG
GTTACTTTGGGGAGTTTGTCAGGGTGAAGATAAAGATAGATATCAACGCCAAGATCAAACATTTCGTCACCGGAAAAAAG
GGGGATGAGAGGATCAAATATCAAGGTAAGTATGAGAAGCTGCCTATCTTCTGCTATAATTGTGGGGAATTTGGTCATTG
GCATGAGGAATGCGGAGATGGAGAGCATGATGAGATGTCTTTCGAGTGGGGCGATTTTCTCTTTGCTGATAATGTTCGCT
TCAGGCCCTTTGGCCGGGGGAACCCTGCTCCGCAGCGTGGTAGGGGTGGCCCGGGGATGGGCGGTCGTGGGAGAGGACGT
GAACAGTATAACCCAGATCGTAGCTGGCGCTTTAACGCTCAGTAGCAGCAAAACCCTAGAAAGGAGGGGGGTCGTCAGAG
AATACAGAGAAGGAGAAAGGCGTGACTGCGGATAGTACGCCCTAAGGGATGATGAGTACGGGGCATGAGCAGATTCAGAA
CTCAAATAAACGCACCACTGTGGATAATATGGCTAGTTCGTCAATAAGCAACAGTGTGGGAGGGGCCCAGGATGACACTT
TAGCGCTGATTCCAAAACAGCCTCAAGTTCCCCCTCTCCCACCAGTTTATGTGTCACCAAGGAAGGATCGGAAAAGGCCA
AAGAAAGGGATGGATGAGTCAGGAAAGACGGTGGAGACAGGCAAAGCCACCAACACCAATGAAGCACAATCAGCGGGCTC
CTTCGAGGAGCACCGCCGGGCGCATTGAGTATCCTGAGTTGGAACTGTCGTGGCGCGGGCAACGCTGCGACGGTTCGAGA
ACTTCACGATTTCGCGAAGGATTTTGCCCCTACCCTGTTATGCATTGTTGAGACTCAGATTGAGAGATCTAGGGTAGAAA
ACTTAGCTGGTTCGATCGGTTATGACAATGGCTATGCTGTGAGTAGTCAAGGTAGAAGTGGTGGACTTGGTATTTTTTGG
AATAATCCAATAAAGATTGAGATTCTTGGTTATTCTGTGTACCATATTGATTGCTCTGTGGAAGAACCAGGGAGTGATCC
ATGGAGAATGACGGTGGTCTATGGGGAAGCTCAAACATCTTTAAGGTTCCAAACGTGGGACATATTAAAAGGGATCAGTA
CTTTGAGTGATCTGCCATGGGTGTGTATAGGCGATTTT-AACAAGGTGGTTCATCCGGACGAACATGAAGGTGTTGGGGA
ACGAAGCAATGCCCAAATACAAGGCTTCCGTGAGGCGGTGGATGTTTGCATGTTAATGGATGTTGGCTATCAGGGGCACT
TCTGGACTTATGAGAAGAAAGTGGTGGGAGGAAGTTATACCCGCGTGCGGCTGGATCGCGCCTTAGCCTCGGCGGAGTGG
AATGAA
>chr4D_43
CGA------------------------------------------TCGATGGCCGGAGCCGGTGATGACGATGCCCTTAT
CATCGTTTCCTTCATGAAGGCATCATCGAGGTGAAGCTCCCAACTCCACTCAATACCTCCGGGGGAAACCCTAGATCAGC
TGATCGGATGTTGGCGGCAATCATGTGTCATAACCCCCTTGGGGGTGACATTCTTGGAGGTGCACTCGGCTTCGCGGGAC
CAGCGGACGGCTTCTTTGGTGGAGCGGTGCTTCATCCAT-ACATTGATGGCGATGGATCTTGACGGCATGGCGCAGTGCA
GATTCGGAGTTCGATGTGGGAGGATGGACTCGCGCAGGAGGACGACTCTGTCTGGCGTCATGGTGGCGTCGATGGCAGTG
AGACATGGCATGGTAGATGCAACCGTATAACTCTGAAGATGGACTCGTGGCAGGTGGCTGCGGCGGCCTCATACCCGGCA
GGCGTCCTGGTTGAGGAGTGCGCCGGACTGGTAGGTGCCCCATACCAGGCAGGCGTCCTGATTGGGACCTCAGGTCTTAG
ATGTTTAGGTTTGGCTGCGATGTCTGTTTGGTATTAGGCCC-AGGCTATCAGCGCCCCTTCATCAATTGGATAGGTATAG
CGACAGTTGTTGCTTAGACGGTGGCTTCAGTCTTGCTGTTGTATGACGTTGTAAGGTCTTGTGAGAATAATTAATAAAGT
GGCCGCATGCATCGCCCAGATGCAGAGGCCGAAGGTCATCCTCCTTTTCTAAAAAAAT----------------------
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>chr3D_43
------------------------------------------CGGTCGATGGCCGGAGCCGGTGATGACGATGCCCTTAT
CATCGTTTCCTTCATGAAGGCATCATCAAGGTGAAGCTCCCAACTCCACTCAATACCTCCGGGCGAAACCCTAGATCAGC
TGATCGGATGTTGGCGGCAATCATGTGTCGTAACCCCCTTGGGAGCGGCATTCTTGGAGGTGCACTCGGCTTCGCGGGAC
CAGCGGACGGCTTCTTTGATGGAGCGGTGCTTCATCCAT-ACATTGATGGCGACGAATCTTGACGGCGTGGCGCAGTGCA
GATTTGGAGTTCGATGTGGGAGGATGGACTCGTGCAGGAGGACGACGCTGTCTGGCGTCGTGGTGGCATTGATGGCAGCG
AGACCTGGCACGGTAGATGCAACAGTACAGCTCTGAAGATGGACTCGTGGCAGGTGGCTGCGGCGGCCTCATACCCGGCA
GGCGTCCTGGTTGAGGAGTGCGCCGGACTGGTAGGTGCCCCATACAAGGCAGGCGTCCTGGTTGGGACCTCAGGTCTTAG
ATGTTTAGGTTTGGCTGCGATGTCTGTTTGGTATTAGG-CC-AGGCTATGAGCGCCCCTTCATCAATTGGATAGGTGTAG
CGACAGTTGTTGCTTAGACGGTGGCTTCAGTCTTGCTGTTGTATGACTTTATAAGGTCTTATGAGAATAATTAATAAAGT
GGCCGCATGCATCGCCCAGATGCAGAGGCCGGGGGTCATCCTCCTTTTCTAAAAAAAAT---------------------
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>chr3D_43
------------------------------------------CGGTCGATGGCCGGAGCCGGTGATGACGATGCCCTTAT
CATCGTTTCCTTCATGAAGGCATCACCGTGGTGAAGCTCCGAACTCCACTCAATACCTCCGGG-GAAACCCTAGATCGGC
TGATCGGATGTTGGCGGCAATCATGTGTCGTAACCCCCTTGGGGGCGGCATTCTTGGAGGTGCACTCGGCTTCGCGGGAC
CAGCGGACGGCTTATTTGGTGGAGCGGTGCTTCATCCAT-ACATTGATGGCGACGGATCTTGACGGCGTGGCGCAGTGCA
GATTCGGAGTTCGATGTGGGAGGATGGACTCGCACAGGAAGACGACGCTGTCTGGCGTCGTGGTGGCGTCGATGGCAGTG
AGACCTGACACGGTAGATGCAACAGTACAGCTCTGAAGATGGACTCATGGCAGGTGGCTGCGGCGGCCTCATACCCGGCA
GGCGTCCTGGTTGAGGAGTGCGCCAGACTGGTAGGTGCCCCATACCAGGCAGGTGTCCTGGTTGGGATCTCAGGTCTTAG
ATGTTTAGATTTGGCTGCGATGTCTGTTTGGTATTAGGCCC-AGGCTATCAGCGCCCCTTCATCAATTGGATAGGTGTAG
CGACAATTGTTGCTTAGACGGTGACTTCAGTCTTGCTGTTGTATGACTTTGTAAGGTTTTGTGAGAATAATTAATAAAGT
GGCCGCATGCATTGCCCAGATGCAGAGGTCGGGGGTCATCCTCCTTTTCTAAAAAAAAAAT-------------------
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>chr3D_43
------------------------------------------CGGTCGATGGCCGGAGCCGGTGATGACGATGCCTTTAT
CATCGTTTCCTTCATGAAGGCATCATCGAGGTGAAGCTCCCAACTCCACTCAATACCTCTGGGGGAAACCCTAGATCAGT
TCATCGGATCTTGGCGGCAATCATGTGTCGTAACCCCCTTGGGGGCAGCATTCTTGGAGGTGCACTCGGCTTCGCGGGAC
CAGCGGACGGCTTCTTTGGTGGAGCGGTGCTTCATCCAT-ACATTGATGGCGACGGATCTTGACGGCGTAGCGCAGTGCA
AATTCGGAGTTCGATGTGGGAGGATGGACTCGCGCAGGAGGATGACACTGTCTGGCGTCATGGTGGCGTCGATGGCAGTG
AGACCTGGCACGGTAGATGCAACAGTAGAGCTCTGAAGATGGACTCGTGGCAGGTGGCTGCGGCGGCCTCATACCCGGCA
GACGTCCTGGTTGAGGAGTGCGCCGGACTGGTAGGTGCCCCATACCAGGCAGGCGTCCTGGTTGGGACCTCAGGTCTTAG
ATGTTTAGGTTTGGCTGTAATGTCTGTTTGGTATTAGGCCC-AGGCTATCAGCACCCCATCATCAATTGGATAGGTGTAG
CGACAGTTGTTGCTTAGACGGTGGCTTCAGTCTTGCTGTTGTATGCCTTTGTAAGGTCTTGTGAGAATAATTAATAAAGT
GGCCGCATGCATCGTCCAGATGCAGAGGCCGGGGGTCATCCTCCTTTTCTAAAAAAAA----------------------
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>chr2D_43
------------------------------------------CGGTCAATGGCCGGAGCCGGTGATGACGATGCCCTTAT
CATCGTTTCCTTCATGAAGGCATCATCGAGGTGAAGCTCCCAACTCCACTCAATACCTCCGGGGGAAACCCTAGATCAGA
TGATCGGATGTTGGCGGCAATCATGTGTCGTAACCCCCTTGGGGGCGGCATTCTTGGAGGTGCACTCGGCTTCGCGGGAC
CAGCGGACGGCTTCTTTGGTGGAGCGGTGCTTCATCCAT-ACATTGATGGCGACGGATCTTGACGGCGTGGCACAGTGCA
GATTCGGAGTTCGATGTGGGAGGATGGACTCGCGCAGGAGGACGACGCTGTCTGGCGTCGTGGTGGCGTCGATGGCAGTG
AGACTTGGCACGGTAGATGCAACGGTACAACTCTGAAGATGGACTTGTGGCAGGTGGCTGCGGCGGCCTCATACCCGGCA
GGCGTCCTGGTTGAGAAGTGCGCCGGACTGATAGGTGCCCCATACCAGACAGGCGTCCTGGTTGGGACCTCAGGTCTTAG
ATGTTTAGGTTTGGTTACGATGTATGTTTGGTATTAGG-CCCAGGCTATCAGTGCCCCTTCATCAATTGGATAGGTGTAG
CGACAGTTGTTGCTTAGACGGTGGCTTCAGTCTTGCTGTTGTATGATTTTGTAAGGTTTTGTGAGAATAATTAATAAAGT
GGCTGTATGCATCGCCCAGATGCAGAGGCCGGGG-TCATCCTCCTTTTCAAAAAA-------------------------
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>chr2D_43
------------------------------------------CGGTCGATGGCCGGAGCCGGTGATGACGATGCCCTTAT
CATCGTTTCCTTCATGAAGGCATCATCAAGGTGAAGCTCCCAACTCCACTCAATACCTCCGGGGGAAACTCTAGATCAGC
TGATCGGATGTTGGCGGCAATCATGTGTCGTAACCCCCTTGGGTGCGGCATTCTTGGAGGTGCACTCGGCTTCGCGGGAC
CAGCGGACGAC-TCTTTGGTGGAGCGGTGCTTCATCCAT-ACATTGATGGCGACGGATCTTGACGGCGTGGCGCAGTGCA
GATTCGGAGTTCGATGTGGGAGGATGGACTCGCGCAGGAGGACGACGCTGTCTGGCGTCCTGGTGGCATCGATGGCAGTG
AGAACTGGCACGGTAGATGCAACAGTACAGCTCTGAAAATGGACTCATGGCAGGTGGCTGCGGCGGCCTCATACCCGGCA
GGCGTCCTGATTGAGGAGTGCGCCGGACTGGTAGGTGCCCCATACCAGGCAGGCGTCCTGGTTGGGACCTCAGGTCTTAT
ATGTTTAGGTTTGGCTGCGATGTCTGTTTGGCATTAGG-CTCAGGCTATCAGCGCCCCTTCATCAATTGGATAGGTGTAG
CGACAGTTGTTGCTTAGACGGTGGCTTCAGTCTTACTGTTGTATGACTTTATAAGGTCTTGTGATAATAATTAATAAAGT
GGCCGCATGGATCGCCCAGATGCAGAGGCCGGGGGTCATCCTCCCTTTTTTAAAAAAAAA--------------------
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>chr6D_43
------------------------------------------CGGTCGATGGCCGGAGCCGGTGATAATGATGCCCTTAT
CATCGTTTCCTTCATGAAGGCATCATCGAGGTGAAGCTCCCAACTCCACTCAATACCTTCGGGGGAAACCCTAGATCAGC
TGATCGGATGTTGGCGGCAATCATGTGTCGTAACCCACTTGGGGGCGGCATTCTTGGAGGTGCGCTCGGCTTCGTGGGAC
CAGCGGACGGCTTATTTGCTGGAGCGGTGCTTCATCCAT-ACATTGATGGCGACGGATCTTGACGGCGTGGCGCAGTGCA
GATTCGGAGTTCGATGTGGGAGGATGGACTCGCGCAGGAGGACGGCGCTGTCTGGCGTCGTGGTGGCGTCGATGGCAGTG
AGACCTAGCACGGTAGATGCAACAGTACAACTCTGAAGATGGACTCGTGGCAGGTGGCTGCGGCGGCCTCATACCCGGCA
GACGTCCTGGTTGAGGAGTGCGCCGGACTGGTAGGTGCCCCATACCAGGCACGCGTCCTGGTTGGGACCTCAGGTCTTAG
ATGTTTAGGTTTGGCTGCGATGTCTGTTTGGTATTAGG-CCCAGGCTATCAGCGCCCCTTCATCAATTGGATAGGTGTAG
CGACAGTTGTTGCTTAGACGGTGGCTTCAGTCTTGATGTTGTATGACTTTGTAAGGTCTTGTAAGAATAATTAATAAAGT
GGCCGCATGTATCGCCTAGATGCAGAGGCCGGGGGTCATCCTCCTTT---------------------------------
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>chr7D_43
------------------------------------------CGGTTGATGGCCGGAGCCGGTGATGACGATGCCCTTAT
CATCGTTTCCTTCATGAAGGCATCATCGAGGTGAAGCTCCCAGCTCCACTCAATACCTCCGGGGGAAACCCTAGATCAGC
TGATCGGATGTTCGCGGCATTCATGTGTCGTAACCCCCTTTGGGGCGGCATTCTTGAAGGTGCACTCGACTTCGCGGGAC
CAGCGGACGGCTTCTTTGGTGGAGCGGTGCTTCATCCTACACATTGATGGCGACGGATCTTGACGGCGTGGTGCAGTGCA
GATTCGGAGTTCGATGTGGGAGGATGGACTCGCGCAGGAGGACGGCGCTGTCTGGCGTCGTGGTGGCGTCGATGGCAGAG
AGACCTGGCACGGTAGATGCAACAGTACAGCTCTGAAGATGGACTCGTGGCAGGTGGCTGCGGCGGCCTCATACCCGGCA
GGCGTCCTGGTTGAGGAGTGCGCCGGACTGGTAGGTGCCCCATACCAGGCAGGCGTCCTGGTTGGGACCTCAGGTCTTAG
ATGTTTAGGTTTGGCTGCGATGTCTGTTTGGTATTAGG-CCCAGGCTATCAGCGCCCCTTCATCAATTGGATGGGTGTAG
CGACAGTTGTTGCTTAGACGGTGGCTTTAGTCTTACTATTGTATGACTTTATAAGGTCTTGTGAGAATAATTAATAAAGT
GGCCGCATGCATCGTCCAGATGCAGAGGCCGGGGGTGATCCTCCTTTTCTAAAAAAAAAT--------------------
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>chr1D_43
------------------------------------------CGGTTGATGGCCGGAGCCGGTGATGACGATGCCCTTAT
CATCGTTTCCTTCATGAAGGCATCATCGAGGTGAAGCTCCCAACTCCACTCAATACCTCCGGGGGAAACCCTAGATCAGC
TGATCGGATGTCGGCGGCAATCATGTGTCGTAACCCCCTTGAGGGCGGCATTCTTGGAGGTGCACTCGGCTTCGCGGGAC
CAGCGGATGGCTTCTTTGGTGGAGCGGTGCTTCATCCAT-ACATTGATGGCGACAGATCTGGACAGCGTGGCGCAGTGCA
GATTCGGAGTTCGATGTGGGAGGATGGACTCGCGCAGGAGGACGACGCTGTCTAGCGTCGTGGTGGCGTCGATGGCGGAG
AGACCTGGCATGGTAGATGCAACAGTACAGCTCTGAAGATGGACTCGTGGCAGGTGGCTGCGGCGGCCCCATACCCGGCA
GGCGTCCTGGTTGAGGAGTGCGCCGGACTGGTAGGTGCCCCATACCAGGCAGGCGTCCTGGTTGGGACCTCAGGTCTTAG
ATGTTTAGGTTTGGCTGTGATGTCTGTTTGGTATTAGG-CCCAGACTATCAGCGCCCCTTCATCAATTGGATAGGTGGAG
CGATAGTTGTTGCTTAGACGGTGGCTTCAGTCTTACTGTTGTATGACTTTGTAAGGTCTTGCGAGAATAATTAATAAAGT
GGCCGCATGCATCGCCCAGATGCAGAGGCCGGGGGTCATCCTCCTTTTCTAAAAAAAAA---------------------
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>chr3A_863
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----------------------------------------------------------------TCCCCTAGGCGAAAAA
CCACAGGGTTTCGATCTCTTCCGGCGATCTACGTCAGAATCTACTTTTTCTCCCGTCGTGCTCGCGCACCCCCGGCTGCC
A-AGACTCGGCGCTGTCTCTAGCCGCTGGTCGACCACCGAGGATGACGGAGAGCGCGGGATCACAGCGTAGGAAGGGAAG
AGAGACGGCGGAAGAACTGCTGGCAAGGCTCACTTTGCAGGAAGAGGAGGAGGATGAATTCGTCTGGGAGGAAGAGCTGC
CTGACAGTTTGGAACCTGCGAAGTGGTTCGCGATTGCCCGCGTCCACACGCCGAAATCGTTCAGTCCTAATGCCCTCTAC
GGGGATATGCGGGCGGCCTGGAACCCGGCTAGACCGGTGGTGTGGAGAAAGATCAAGGAAAATCTCTTCACAGCGCAATT
TGGATGCCTT-GGTGACTGGAATAAGGCCATGCTTGAGGGGCCTTGGTTGTTTAGAGATCAGGCGGTGATCATGGAGGAA
TATGACGGATTTAGAAACCTTGATTCTTTTAAACTCGACAGGCTGGCTGTTTGGGCTCAGATCCACCGGCTTCCTAATAA
TTTTCTGGTCGAACCAGCAGTGAAAGGGCTAGCCTCCAGAATCGGCGAAGTGGAAGAAGTACAATTGAAGCTGCCTGCAG
GTTACTTTGGGGAATTTGTCAGGGTGAAGATAAAGATAGATATTAATGCCAAGATCAAGCATTTCGTCACTGGAAAAAAG
GGAGATGAGAGGATCAAATATCAAATTAAGTATGAAAAGTTGCCTATCTTCTGCTACAATTGTGGGGAGTTTGGTCATTG
GCATGAGGAGTGCGGAGATGGAGTGCATGATGAGATGTCTTTCGAGTGGGGCGATTTTCTCTTTGCTGATAATGTTTGCT
TCAGGCCCTCTGGCCGGGGGAACCCTGCTCCTCAGTGTGGCAGAGGTGGCCCGGGGATGGGCGGTCGTGGGAGAGGCCGT
GAACAGTATAACCCAGAGCGAAGCTGGCGTTTTAATGCTCAACAGCAGCAGAACC-----------GGGGGACGGCAGGG
AACACAGAGGAGGAGAAAGTTGGGACTGAGGATGGAGCGACCCAGGGGTTGATGAGTACGGGGCAGGAGCAGTGTCAGAA
CTCAAATAAACGCATCTCCGTGGACAACATGGCTAGTATATCGACGAGCGACAGTGTGGAGGGGTCCCAGGATGACACTT
TAGCGTTGATTCCTGTTCAGCCTAAAGTTCCCCCTCTCCCACCAGTTTATGTGTCACCAAGGAAGGAAAGGAAAAGGCCA
AAGAAAGGGATGGATGAGTCAGGATTGACGGTGGAGATAGGCGAAGCCACCAATATCAATGAAGCACAATCGGCGGGCTC
CTTCGAGGGGTACCGCCGGGCGCAATGAGTATTCTGAGTTGGAACTGTCGTGGCGCGGGCAACGCTGCGACGGTTCGAGA
ACTTCGTGATTTCGCGAAGGATTTTGCCCCTACCCTATTATGCATTGTTGAGACACAGATTGAGAGATCTAGGGTAGAAA
ACTTAGCTGGTGCGATCGGTTATGATAGTGGCTATGATGTAAGTAGTCAAGGTAGAAGTGGTGGACTTGGTATTTTCTGG
AATAATCCAATAAAGATTGAGATTCTTGGTTACTCTGTTTACCACATTGATTGCTCTGTGGAAGAACCAGGGAGTGATCG
ATGGAGAATGACGTTGTTCTATGGGGAAGCTCAAACATCTCTAAGGTTCCAAACGTGGGATATATTAAAAGGGATCAGTT
CTTTGAGTGATCTGCCATGGGTGTGTTTAGGCGATTTT-AACGAGGTGCTTCGTCCGGACGAACATGAAGGAGTTGGGGA
ACGAAGCAATGCACAAATACAAGGCTTCCGTGAGGCGGTTGATGTTTGCATGTTAATGGATGTTGGCTATCAGGGGCACT
TCTGGACTTATGAGAAGAAAGTGGTGGGAGGAAGTTATACCCGGGTGCGGCTGGATCGCGCCTTAGCCTCGGCGGAGTGG
AATGAA
>chr3A_968
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---------GCGCTGTCTCTAGCCGCTGGTCGACCACCGAGGATGATGGAGAGCGCGGGATCGCAGCGTAGGAAGGGAAG
AGAGACGGCGGAAGAACTGCTGGCAAGGCTCACTTTGTAGGAAGAGGAGGAGGAGGATTTCGTCTGGGAGGAAGAGCTGC
CTGACAGTTTGGAACCTGCGAAGTGGTTGGCGATTGCCCGCGTCCACACGCTGAAATCATTCAGTCCTAATGCCCTCTAC
GGGGATATGCGGGCGGCCTGGAACCCGGCTAGACCGGTGGTGTGGAGAAAGATCAAGGAAAATCTCTTCACAGCGCAATT
TGGATGCCTT-GGTGACTGGAATAAGGCCATGCTTGAGGGGCCTTGGTTGTTTAGGGATCAGGCGGTGATCATGGAGGAA
TATGACGGATTTAGAAACCCTGATTCTTTTAAACTCGACAGGCTGGTTGTTTGGGCTCAGATCCACCGGCTTCCTAATAA
TTTTCTGATCGAACCAGCAGTGAAAGGGCTAGCCTCCAGAATCGGCGAAGTGGAAGAAGTACAATTGAAGCTGCCTGCAG
GTTACTTTGGGGAATTTGTCGGGGTGAAGATAAATATAGATATTAATGCCAAGATCAAGCGTTTCGTCACTGGAAAAAAG
GGAGATGAGAGGATCAAATATCAAATTAAGTATGAAAAGTTGCCTATCTTCTGCTACAATTGTGGGGAGTTTGGTCATTG
GCATGAGGAGTGCGGAGATGGAGTGCATGATGAGATGTCTTTCGAGTGGGGCGATTTTCTCTTTGCTGATAATGTTCGCT
TCAGGCCCTCTGGCCGGGGGAACCCTGCTCCTCAGCGTGGCAGAGGTGGCCCGGGGATGGGCGGTCATGGGAGAGGCCGT
GAACAGTATAACCCAGAGCGAAGCTGGCGTTTTAATGCTCAACAGCAGCAGAACC-----------GGGGGACGGCAGGG
AACACAGAGGAGGAGAAAGTTGGGACTGAGGATGGAGCGACCCAGGGGTTGATGAGTACGGGGCAGGAGCAGTGTCAGAA
CTCAAATAAACGCATCTCTGTGGACAACATGGCTAGTATATCAACGAGCGACAGTGTGGAGGGGTCCCAGGATGACACTT
TAGCGCTGATTCCTGTTCAGCCTAAAGTTCCCCCTCTCCCACCAGTTTATGTGTCACCAAGGAAGGAAAGGAAAAGGCCA
AAGAAAGGGATGGATGAGTCAGGATTGACGGTGGAGACAGGCGAAGCCACCAATATCAATGAAGCACAATCGGTGGGCTC
CTTCAAGGGGTACCGCCGGGCGCAATGAGTATCCTGAGTTGGAACTATCGTGGCGCGGGCAACGCTGCGACGATTCGAGA
ACTTCGCGATTTCGTGAAGGATTTTGCCCCTACCCTGTTATGCATTGTTGAGACACAGATTGAGAGATCTAGGGTAGAAA
ACTTAGTTGGTGCGATCGGTTATGATAATGGCTATGCTGTAAGTAGTCAAGGTAGAAGTGGTGGACTTGGTATTTTCTGA
AATAATCCAATAAAGATTGAGATTCTTGGTTACTCTGTTTACCACATTGATTGCTCTGTGGAAGAACCAGGGAGTGATCG
ATGGAGAATGATGTTGTTCTATGGGGAAGCTCAAACATCTCTAAGGTTCCAAACGTGGGATATATTAAAAGGGATCAGTT
CTTTGAGTGATCTGCCCTGGGTGTGTTTAGGCGATTTT-AACGAGGTGCTTCGTCCGGACGAACATGAAGGAGTTGGGGA
ACGAAGCAATGCACAAATACAAGGCTTCCGTGAGACGGTTGATGTTTGCATGTTAATGGATGTTGGCTATCAGGGGCACT
TCTGGACTTATGAGAAGAAAGTGGTGGGAGGAAGTTATACCCGGGTGCGGCTGGATCACGCCTTAGCCTCGGCGGAGTGG
AATGAA
>chr2A_1064
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-------------------------AGGCTCACCCTATAGGAGGAGGAAGAGGATGATTTCGTCTGGGAGGAAGAGTTGC
CGGACATGGCGGAACCAGCGAAGTGGCTGGCGATCGTCAGAGTCCATACACCAAAAACTTTCAGCCCCAATGCTCTGTAT
GGGGATATGCGGGCAGCATGGAATCCGGCACGACCGGTGGTGTGGACGAAGATCCGTGAGAACCTCTTCACGGCGCAGTT
TGGTTGTCTGGGGGGAATGGAACAAGGCGATGTCAGAAGGCCCATGGTTGTTCAGAGATCAAGCAGTTATTATGGAGGAG
TACGACGGGTTCAAAAACCCAGATTCGTTCAAACTGGATAAATTAGCTGTATGGGCACAAATCCATTGTCTTCCCGACAA
GTTCTTGATTGAGCCAGCGGTCATAGGCTTGGCATCAAGGATCGGGGAAGTGCAAGAGGTACAATTGAAATTACCAGCAG
GTTTCTTTGGAGAATTTGTCAGGGTCAGAGTGAAGCTTGACATCAACGCTAAGATCAA----------------------
--------------------------------------------------------------------------------
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>chr5B_1262
--------------------------------------------------------------------------------
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---------------------------------------------------------------CTCTTCACAGCGCAATT
TGGATGCCTT-GGTGACTGGAATAAGGCCATGCTTGAGGGGCCTTGGTTGTTTAGAGATCAGGCGGTGATCATGAAGGAA
TATGACGGATTTAGAAACCCTGATTCGTTTAAACTCGACAGGCTGGCTGTTTGGGCTCAGATCCACCGGCTCCCAAACAA
TTTCTTGATCGAACCAGCAGTGAAAGGGCTGGCCTCGAGGATCGGCGTAGTGGAGGAAGTACAATTGAAGCTGCCTGCAG
GTTACTTTGGGGAATTTGTCAGGGTGAAGATAAAGATAGATATCAATGCCAAGATCAAGCGTTTCGTAACAGGAAAAAAG
GGAGATGAGAGGATCAAATATCAAGTCAAGTATGAAAAGCTGCCTATCTTCTGCTACAACTGTGGGGAATTTGGTCATTG
GCATGAGGAGTGCGGAGATGGTGTGCATGATGAGGCATCTTTCGAGTGGGGTGACTTTCTCTTTGCTGATAATGTTCGCT
TCAGGCCCTCTGGTCGGGGGAACCCTGCTCCGCAGCGCGGCAGAGGCGGCCCGGGGATGGGCGGTCGAGGGAGAGGACGT
GAACAGTATAACCCAGAGAGAAGCTGGCGTTTTAACGCTCAACAACAGCAGAACA-----------GGGGGACGGCAGAG
GACACAGAGAAGGAGAAAGTTGGGACTACGGAAGGAGCGAACCAGGGGTTGATGAGTACGGGGAAGGAGCAGTTTCAGAA
CTCAAATAAACGCATCTCTGTGGAGAACATGGCTAGTACATCGACGAGCAACAATGTGGAAGGGTCCCAGGATGACACTT
TAGCGCTGATTCCTGTACAGCCTAAAGTTCCCCCTCTCCCACCAGTTTATGTGTCACCAAGGAAGGAGAGGAAAAGGCCA
AAGAAAGGGATGGATGAGTCAGGAGCGAGGGTGGAGACAGGCGAAGCCACCAATACCAATGAAGCACAATCGGCGGGCTC
CTTCGAGGAGCACCGCCGGGAGCAATGAGTATCCTGAGTTGGAACTGTCGTGGCGCGGGCAACGCTGCGACAGTCCGAGA
ACTTCGCGATTTCGTGAGGGATTTTGCCCCTACCCTGTTATGCATTGTTGAGACTCAGATTGAGAGATCTAGGGTAGAAA
ACTTAGCTGGTTCGATTGGTTATGATAATGGCTATGCTGTAAGTAGTCAAGGTAGAAGTGGTGGACTAGGTATTTTCTGG
AACAATCCAATAAAGATTGAGATTCTTGGTTATTCTGTGTACCATATTGATTGCTCTGTGGAAGAACCAGGAAGCGACCC
ATGGAGAATGACATTGTTCTATGGTAAAGCTCAAACATCCCTAAGGTTCCAAACGTGGGACATATTAAAAGGGATCAGCT
CTTTAAGTGATCTACCCTGGGTGTGTTTAGGCGATTTT-AACGAGGTGCTTCGTCCGGACGAACATGAAGGAGTTGGGGA
GCGAAGCAATGCACAAATACAAGGCTTCCGTGAGGCGGTTGATGTTTGCATGTTAATGGATGTTGGCTATCAGGGGCACT
TCTGGACTTATGAGAAGAAAGTGGTGGGAGGAAGTTATACCCGGGTGCGGCTGGATCGCGCCTTAGCCTCAGCGGAGTGG
AATGAA
>chr5A_2162
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----AAGGGATGGATGAGTCAGGATTGACGGTGGAGACAGGCGAAGCTACCAATACCAATGAAGCACAATCGGCGGGCTC
CTTCGAGGGGTACCGCCGGGTGCAATGAGTATCCTGAGTTGGAACAGTCGTGGCGCGGGCAACGCTGCGACGGTTCGAGA
ACTTCGCGATTTCGCGAAGGATTTTGCCCCTACCCTGTTATGCATTGTTGAGACACAGATTGAGAGATCTAGGGTAGAAA
ACTTAGCTGGTGCGATCGGTTATGATAATGGCTATGCTGTAAGTAGTCAAGGTAGAAGTGGTGGACTTGGTATTTTCTGA
AATAATCCAATAAAGATTGAGATTCTTGGTTACTCTGTGTACCACATTGATTGCTCTGTGGAAGAACCAGGGAGTGATCG
ATGGAGAATGACATTGTTCTATGGGGAAGCTTAAACATCTCTAAGGTTCCAAACGTGGGATATATTAAAAGGGATCAGTT
CTTTGAGTGATCTGCCCTGGGTGTGTTTAGGCAATTTT-AACGAGGTGCTTCGTCCGGACGAACATGAAGGAGTTGGGGA
ACGAAGCAATGCCCAAATACAAGGCTTCCGTGAGGCGGTTGATGTTTGCATGTTAATGGATGTTGGCTATCAGGGGCACT
TCTGGACTTATGAGAAGAAAGTGGTGGGAGGAAGTTATACC-GGGTGCGGCTGGATCGCGCCTTAGCCTCGGCGGAGTGG
AATGAA
>chr3B_2193
GACATGGGAAAGACAACAATCAA---------------------------------------------------------
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--------------------------------------------------------CAATATTGCAACATCGGCGGGCTC
CGGCGAGGAGCACCGCCGGGCGCAATGAGTATTCTAAGTTGGAACTGTCGCGGTGCGGGCAACGCTGCGACAGTTAGAGA
ACTTCGCGAGATCGCGAGGGATTTTGCCCCTACCCTT-TATGTATTGTTGAAACACAAATTGAAAGGACGAGGGTAGAAA
GTCTAGCAGGAACTATTGGCTATGATAATGGCTATGCTGTAAGTAGCCAAGGTAGAAGCGGCGGTTTAGGTTTGTTTTGG
AATAATCCAATAAAGATTGAGATTCTTGGTTATTCGGTTTATCATATTGATTGCGCTGTGGAGGAACCAAACAGTGAACC
ATGGAGAATGTCTTTGTTTTATGGGGAAGCACGAACGCACTTAAGATATCAAACTTGGGATGTGTTGAAAGGAATAAGCA
CTTTGAGCAATCTCCCGTGGATATGTATAGGGG-TTTT-AATGAAGTTCTACGTCCAGATGAACAAGAAGGTATTGGAGA
GAGGAGCAATGCCCAAATTCCGGGTTTTAGGGATGCGGTGGGCGTGTGCATGTTGATGGATATTGGCTATCAGGGCCGTT
TTTGGATGTATGAAAAGAAGGTGACTGGAGGGAGTTATACTCGGGTCAGGTTGGACCGGGCGATGGCTACAGCTGAGTGG
AATGA-
>chr1A_2205
-------------CAACAACCAA---------------------------------------------------------
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--------------------------------------------------------CAATGCAGCAATATCGGCGGGCTC
CGGCGAGGAGCACCGCCGGGCGCAATGAGTATTCTAAGCTGGAACTGTCGCGGTGCGGGCAACG-TGCGACAGTTAGAGA
ACTTCGCGAGATCGCGAGGGAATTTGCCCCTACCCTTTTATGTATTGTTGAAACACAAATTGAAAGGACGAGGGTAGAAA
GTCTAGCAGGAACTATTGGCTATGATAATGGCTATGCTGTAAGTAGTCAAGGTAGAAGCGATGGTTTAGGTTTGTTTTGG
AATAATCCAATAAAGATTGAGATTCTTGGTTATTCGGTTTATCATATTGATTGCTCTGTGGAGGAACCAAGCAGCGAACC
ATGGAGAATGTCTTTGTTTTACGATGAAGCACAAACACACTTAAGATATCAAACCTGGGATGTGTTGAAAGGAATAAGCA
CTTTGAGCAATCTCCCGTGGATATGCATAGGGG-ATTTCAATGAAGTCCTACGTCCAGATGAACAAGAAGGTATTGGAGA
GAGGAGCAATGCCCAAATTCAGGGTTTTAGGGATGCGGTGGATGTGTGCATGTTGATGGATATTGGCTATCAGGGCCGGT
TTTGGACGTATGAAAAGAAGGTGACTGGTGGGAGTTATACTCGGGTCAGGCTGGA-------------------------
------
>chr5B_2208
----------------CAACCAA---------------------------------------------------------
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--------------------------------------------------------CAATGAAGCATCATCGGCGGGCTC
CAGCGAGGAGCACCGCTGGGCGCAATGAGTGTTTTAAGCTGGAACTGTCGTGGCGCGGGCAACGCTGCGACAGTTAGAGA
GCTTCGCGAAATCGCGAAGGAGTTTGCCTCTACCCTTTTATGTATCGTTGAAACACAAATTGAAAGGACAAGGGTAGAAA
GTCTAGCAGGAACCATCGGCTATGATAATGGCTATGCTGTAACTAGTCAAGGTAGGAGCGGTGGTTTAGGAATATTCTGG
AATAATCCAATAAAGATCGAAATTCTGGGTTACTCGGTGTATCATATTGATTGTTCGGTGGAGGAACCAAACACTGATCC
ATGGAGAATGTCCTTGTTTTATGGTGAAGCACAAACACACCTAAGATACCAAACGTGGGATGTTATGAAAGTAATTGGGT
CTTTGAGCAACCTCCCGTGGATTTGCATAGGGG-ATTTCAATGAGGTGCTACGTCCAGATGAACAAGAAGGTGTTGGGGA
GAGGAGCAATGCACAGATTCAGGGTTTTCGGGATGCGGTGGATGTATGCATGTTGATGGACATTGGCTATCAAGGCCATT
TCTGGACTTATGAAAAGAAGGTGGCCGGAGGGAGTTATACCCGGGTAAGACTGGATAGGGCAATAGCCACTGCTGAATGG
A-----
>chr3B_2208
----------------CAACCAA---------------------------------------------------------
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--------------------------------------------------------CAATGCTGCAATATCGGCGGGCTC
CGGAGAGGAGCACCGCCGGGCGCAATGAGTATCCTAAGTTGGAACTATCTCGGTGCAGGCAACACCACAACAGTTACAGA
ACTTCGCGAGATCGCGAGGGAATTTGCCCCTACCCTTTTATGTATTGTTGAAACACAGATTGAAAGGACGAGGGTAGAAA
GTCTAGCAGGAACTATTGGCTATGATAATGGCTATGCTGTAAGTAGTCAAGGTAGAAGCGGTGGTTTAGGTTTGTTTTGG
AATAATCCAATAAAGATTGAGATTCTTGGTTATTCGGTTTATCATATTGATTGCTCTGTGGAGGAACCAAACAGTGAACC
ATGGAGAATGTCTTTGTTTTACGGTGAAGCACAAACACACTTAAGATATCAAACCTGGGATGTGTTGAAAGGAATAAGCA
CTTTGAGCAATCTCTCGTGGATATGCATAGGGG-ATTTCAATGAAGTTCTATGTCCAGATGAACAAGAAGGTATTGGGGA
GAGGATCAATGCCCAAATTATGGGTTTTAGGGATGCCGTGGACGTGTGCATGTTGATGGATATTGGCTATCAGGGCCATT
TTTGGACGTATGAGAAGAAGGTGACTGGAGGGAGTTATACTCGGGTCAGGCTGGACCGGGCGATGGCTACAGCTGAGTGG
AATGA-
>chr6D_2226
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--------------------------------------------------------------------ATCGGCGGGCTC
CTTCGAGGAGCGCCGCCAGGCGCAATGAGTATCTTAAGCTGGAACTGTCGCGGTGCGGGCAAAGCTGCGACAGTTAGAGA
GCTTCGCGATCTCGCGAGGAATTTTGCCCCTACCCTGCTTTGCGTCGTTGAAACACAAATAGAAAGGACTAGGGTAGAAA
ATTTAGCAGGAACAATTGGTTATGATAATAGCTATGCTGTAAGTAGTCAAGGCAGAAGTGGTGGGTTAGGAATTTTCTGG
AATAATCCAATAAAGATTGAGATTCTTGGTTTTTCGGTGTATCATATTGATTGCTCAGCGGAGGAACCGGGTGATGACCC
ATGGAGAATGACACTATTTTATGGAGAGGCACAAACACACTTACGCTACCAAGCGTGGGATGTGTTGAAGGGAATAAGCA
CTTTGAGCGAGCTTCCGTGGGTGTGTGTTGGCG-ATTTCAATAAAGTCCTACGTCCGGATGAACAAGTTGGAGTAGTAGA
ACGTAGTAATGCTCAGATTCAAGGTTTGCGAGATGCTGTCGATGTTTGCATGTTGATGGATATTGGCTATCAAGGACCTT
TCTGGACATACGAGAAAAAGGTGACGGGTGGGAGCTACACCCGTGTGCGCCTAGACCGGGCTTTAGCCACTGCTGAACTG
AATGAA
>SNPs
--SS-SSSSSS-SSS-S-SS-SSSSSSSSSSSSSSSSSSSSS--------------------------------------
---------------S----------------------S-----------------------------------------
---------------------------------------------S----------------------------------
--------------------------------------------------------------------------------
-----------S----------S----------------------------S----------------------------
----------------------S-------S---------------------------S---------------------
--------------------S-----------------------------------------------------------
--------------------------------------------------------------------------S-----
----S-------------------------------------------------S-------------------------
-----------------------------------------------SS---------SSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------S------
--SS--------S-----------S--------S-S--------S----SS-----------------------------
-S------S----------S-------------S-S-------------------------------------------S
-----S------S--S--S------------------------------------------------------------S
-------------------S------------------------------S-----------------------------
--------------------------S-----------------------------------------------------
--------------------------------------------------------------------------------
-----S--S---------------------------S----------------------------------S--S-----
S----------------------SS--S--------------------S---------------S---------------
-------------S--------------------------------------------S-----------S---------
--S----------------------S---------S--------------------S-----------------------
---------S-------------S--------------------------------------------------------
---------S------------------------------S--S------------------------------------
-----------------S--S--------S-----------SS-------S----SSSSSSSSSSS-----S--S-----
--S----------------SS-S----------S-SS--S--S-S---S----------------S------S-------
--------------S-S-------S--S---------S-S----SS-------------S----S---------------
-------------SSS-------S-------------------------------------------SS-----------
------------------------SS----------------S----------S-----------------S--------
------------------------S-------------------------------------------------------
-----S--------------------------------------------------------------------------
-------------------------S--------------S---------------------------------------
--------------------------------------------------------------------------------
-------------S--S---------------------------------------------------------------
------------------------------------------------S---S---------------------------
--------------------------------------------------------------------------------
-------------------------------------------S------------------------------------
------
>forward_343
--------------------------------------------------------------------------------
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---TCGGAGTTTGATGTGGGAGC---------------------------------------------------------
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>reverse_1690
--------------------------------------------------------------------------------
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---------ATGCGGAGATGGAGAGCATG---------------------------------------------------
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>forward_864
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--------------------------------------------TGTGTAGGGAGCCGCTATCT----------------
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>reverse_2095
--------------------------------------------------------------------------------
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--------------AAACAGCCTCAAGTTCCCCC----------------------------------------------
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------
