>input_sequence_66348
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-----------------------------------------------------CTATATATGAAGCACAG-TTCTTTCTC
CACTTCGCTGCATCCGAAGTTTGTCCTGTCCTTCGTACAGCAGTGATGCAGATGAACAACAAGGAGCCGGCCGCCGACGG
CAAGTCGCCGACTACCATCTGTAGCAGGCTTCAGAGAGCCTTCCACGCCCGGCCGGTCTTCGGGCCTCTTCGCCGCCTCA
CGGGCCAACCCCACGACGGCGGAGCTGCCGCTACCGGCGTACCCGGGGGAGCGCCTGCCACGACGCACGGTGGTGCACCG
CCACCGGTTGTATTGCCGGCACGTGCACCGGCGCCGTCTCCAGCAGGCAAAGCTCCCGCACCTACGGCGACACCGGCGAT
CGTGCCAGCGGCGCCCCAGAAACCGGCTGCTGCCAAGGGAGGTGGCAAGCCTGGGCAGGTCCTCGGGAGCACTCCTACCG
TCGCTGCAACCAGGAGCAAGGTTGCCGAGAAGGCGGCAGGGGGGATCCCGGTACCGGTGCCACCGCCGGCAGTCATGGCT
GGAAGGCCGGCAGCGGACGCGAAGGCTGGGG---ACAAGGCGCAGCAGACAAAGGGGAAGATCAGGGTGAGCTCCAGGGT
CCGCAAGGCCTTGGCCTCATCCAAGTAGAGGGATGATCACCTGAATCGCCAGGGTGCGCGCCAAGAACGGAGCTAGCTGA
ATTACGCCTCTCCAAAGCCATTCTCTGCTACCAGTGTGCTGTTTTTTATTTACCGATTTTTGAGCTAGGCTCTCCGTTCT
GCTGTAACTTCAGATTTTCT-TTCTTGTTGATGAATTATCACTTGGGGGATCACCAGGAGGGAAAGTCACAGAAACTGGG
CCGGATTGTACCGGCAATAATATTCTTGGCTCAAGTTTCGTTGATGCTACACATCATATA--------------------
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-----------------------------------------------
>chr3D_1_TraesCS3D01G340600
ACACTATGGCAACTTCAGTGTAAAATCATGGCAACTTTTGGCCCAAGAAAAAGTCA---AAACATGTTAATATTGTATTT
AGTTTTGAAGATCTTGTCGAGACGGATTTAATGTTGAAAATGGATTTTTAATCGTATTTTTTATTTAAAAGATAAAATAT
TTTTAAGTCCGAAAAACCAAAAAAAATTCGCTG-TGTCATCTGTTTGATGTGGTAAAATAGATAATAATGAGGGCGTTTG
AATCATATTGCTTTGTGCCACACATGTGGCACTTATCATTTGGGCTAATTAATATACGAGGCAAATCTTTTGTCTCCATT
TAAAAGTAGAAGAAGAAGGGGATAGTCGATGACATGCTAGATAGTCATGAGTTAAGCTCCCACAAAATGCTGGCATGTGG
TGGCCCAAGGCTTTGGGCAACTTTGGTGGCCCCACATGTAAGTGGGTGCCTCGTAGGTGCAGCGTTTTAGGCCCACTAGC
AGCCAATTCTGGTGGTCGTAACCCAGTCTTATCTTTCTGCCCCCTTTCTTCCGTTGT-TTCCTTCTTTCGCGTTTGCTTT
CCTGGTCCACTACTCAATCTGCTTTAGAGCATCTATAGCCGAACC----AAATTCGACCCCTTAAACGTCCGCGGACGCG
TGAGACGTGACCTTGAAGAGCGATGGACGGCCCCTCAAATGTCCTATTGAACAATCACACTCCTTACCCCTCAAGTTCAT
GTACGTTGATCATATAGTGCAAATTCATCACAATTAAGTCCATAC-AAAAAACGAGTCAAAAGCTAGCCAAATTTAGTGG
TCTATATCCGCAACACTATTAAGGACCGTTCATCTGCGCGGCAAAGCGCGCCTTTCCATCTAGA---ATTCTCGAGGAAT
ATGATACCCGTCTCTCGTCGGCTCATCTGTTGAGTTCGTGCGCGGAGCATCTCATCTGACGGAAAGCGAAGATGTAGCGA
AATGCGTCCCCATCTCTTTCCCTTCACCGGGAAGCTGAGTATATGTCATTTGCCTATATATGAAGCACAG-TTCTTTCTC
CACTTCGCTGCATCCGAAGTTTGTCCTGTCCTTCGTACAGCAGTGATGCAGATGAACAACAAGGAGCCGGCCGCCGACGG
CAAGTCGCCGACTACCATCTGTAGCAGGCTTCAGAGAGCCTTCCACGCCCGGCCGGTCTTCGGGCCTCTTCGCCGCCTCA
CGGGCCAACCCCACGACGGCGGAGCTGCCGCTACCGGCGTACCCGGGGGAGCGCCTGCCACGACGCACGGTGGTGCACCG
CCACCGGTTGTATTGCCGGCACGTGCACCGGCGCCGTCTCCAGCAGGCAAAGCTCCCGCACCTACGGCGACACCGGCGAT
CGTGCCAGCGGCGCCCCAGAAACCGGCTGCTGCCAAGGGAGGTGGCAAGCCTGGGCAGGTCCTCGGGAGCACTCCTACCG
TCGCTGCAACCAGGAGCAAGGTTGCCGAGAAGGCGGCAGGGGGGATCCCGGTACCGGTGCCACCGCCGGCAGTCATGGCT
GGAAGGCCGGCAGCGGACGCGAAGGCTGGGG---ACAAGGCGCAGCAGACAAAGGGGAAGATCAGGGTGAGCTCCAGGGT
CCGCAAGGCCTTGGCCTCATCCAAGTAGAGGGATGATCACCTGAATCGCCAGGGTGCGCGCCAAGAACGGAGCTAGCTGA
ATTACGCCTCTCCAAAGCCATTCTCTGCTACCAGTGTGCTGTTTTTTATTTACCGATTTTTGAGCTAGGCTCTCCGTTCT
GCTGTAACTTCAGATTTTCT-TTCTTGTTGATGAATTATCACTTGGGGGATCACCAGGAGGGAAAGTCACAGAAACTGGG
CCGGATTGTACCGGCAATAATATTCTTGGCTCAAGTTTCGTTGATGCTACACATCATATAAAAAA-GCTTTGTCTCAAAA
AAAAATCACATAAAAAAGCTCACTCAAGAACGAATAACAGATCTATTTATTGTGACTTTATTATACCATCCTTCGCCGAA
CTGCAATGTCCTCCAAATTGACGCAGCTCTTGGAGGCTTACAGG------------GTGTTGGTTCTGAACTTTTGATAG
GTTTGTTCTGAACTTCTGATATGCCAAACAAGTCAGAACTTCTGATAGGTGATCAGCATTACAACTTCTCGATTCGGTGA
ATGATCAGGTCTCTCTCCTCGTCAAGTTCATCTTCGCCTGTAAAATGGAACAAAAAAAAATTACATACGCGAGTTTTTGT
GGTGGTTGACATCATGGCTTCAAGTTTAAACTCAGAACAACCAGAAGC-GGGTTTCCTGACTACTCCATCCTTCTTTTGC
AATTTTAAGCTGGTGTGTAATGGGCTCTAAGATGGAAACTTCACAGCACTACCTTTACTTGCA-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------GGAAGATTGTGGAGTAGTTTCAAC
AATTCCTTGCGATTGTCTCGCAAAGCTTCAATAATACCA-------GGAGGCTTGTTTGGATTGGCAACGAACACCTAAT
TCCGCACAGGAAAATGGACCAACAGAAATTGTTAGAAGGAATTTGTTTGACGAGGAAATACAACGTACGTGCACTTATAT
AACGATGGTACCTTAAAAACGTGGAAGGCGCATATTTTGATATTTTTGCTTGAATCCTAAAAAA-ATGCCGGTTAGTAGT
AACACTCCTACAAATAGATAGGATCTGTACACACATAATATTAG-TAATATTTTTT---------AGAATCTTTTCACGC
AAAAAA-TATGTATTTAATCAACGTCAAA-AAAAGCTGCAAGCTTGTGTTTCTCATAAATGAAGCCTTTCAGATGTATAT
TCACGTCTCAACTTCCAGAGAACTGCTGGAACCTTTGCATAAGAGATAAGAGTGTTTAAGACAGTTTTTTTTTTGACAGA
ACCTTTTTTTTTACAGAACCTCGTAAAGAGGGCAGGGAGCTCTTGCG
>chr3A_1
ACACTATGGCAACTTCAGTGTAAAATCATGGCAACTTTTGGCCCAAGAAAAAGTCATCGAAACATGTTAATATTGTATTT
AGTTTTGGAGATCTCGTCTAGACGGATTTAATGTTGAAAATTTA-TTTTAATCGGATTTTTTATTTAAGAGATAAAATAT
CTGTAAGTCTGAAAAACCAAAAAGATTTCGCTGATGTCATTTG-TTAATGTGGTAAAATGGATAGTAATGATGATGTTTG
AATCATATTGCTTTGTGCCACACATGTGGCACTTATCATTTGGGCTAATTAATATACGAGGCAAATATTTTGTGTCCATT
TGAAAAAGA---AAGAAAAGGATATTCGATGACATGCTAGATAGTCATGAGTTAAGCTCCCACAAAATGTTGGCATGTGG
TGGCCCAAGGCTTTGGGCAACTTTGGTGGCCTCACATGTAAGTGGGTGTCTCGTAGGTGCAGCGTTTTAGTCCCACTAGC
AGCCAATTCTGCTAGTCGTAACCCAGTCTCATCTTTTTGCACCTTTTTTTTCGTTGTGTTC-------------------
---------CTACTCAATCTGCTTTAGAGCATCTATAGCCGAACCTGGCAAATTCGACCACTTAAACGTCCACGGATGCA
TAGGACGTGATCTTAGACAGCGATGGACGGCCCCTCAAATATCCTATTGAACAATCACACTCCTTAACCCTCAAGCTCAT
GTACGTTGATCATATAGTGCAAATTTATCACAATTAAGTCCATAC-AAAACGAGC--CAAAAGCTAGCCAAATTTAGTGG
TCTATATCCGCAACACTATTAAGGACCGTTCATCTGCGCGGCAAAGCGCGCCTTTCCATCTACTAGTATTCCCGAGGAAT
ATGATACCCGTCTCTCGTCGGCTCATCATTTGAGTTCGTGTGCGGAGCATCTCATCTGACGGAAAGCGAAGATGTAGGGA
AATGCGTCCCCATCTCTCTCACTTCACCAGGAAGCTGAGTATATGTCATTTGCCTATATATGAAGCACAG-TTCTTTCTC
CACTTCGCTGCATCCGAAGTTTGTCCT-----TCGTACAGCAGTGATGCAGATGAACAACAAGGAGCCGGCCGCCGACGG
CAAGTCGCCGACTACCATCTGTAGCAGGCTTCAGAGAGCCTTCCACGCCCGGCCGGTCTTCGGGCCTCTTCGCCGCCTCA
CGGGCCAACCCCACGACGGCGGAGCTGCCGCTACCGGCGTACCGGGGGGAGCGCCTGCCGCGACGCACGGTGCTGCACCG
CCACCGGTTGTATTGCCGGCACGTGCACCGGCGCCGTCTCCAGTAGGCAAAGCTCCCGCACCTAAGGCGGCACCGGCGAT
CGTGCCAGCGGCGCCCCAGAAACCGGCTGCTGCCAAGGGAGGTGGCAAGCCTGGGCAGGTCCTCGGGAGCACTTCTACCG
TCGCGGCAACCACGAGCAAGGTTCCCGAGAAGGCGGCAGGGGGGATCCCGGTTCCGGTGCCACCGCCGGCGGTCATGGCT
GGAAGGCCGGCAGCGGACGCGAAGGCTGGGGACAACAAGGCGCAGCAGACAAAGGGGAAGATCAGGGTGAGCTCCAGGGT
CCGCAAGGCCTTAGCCTCATCCAAGTAGAGGGATGATCAACTGAATCGCCAGGGTGCGCGCCAAGAACGGAGCTAGCTGA
ATTACGCATCTCCAAAGCCATTCTCTGTTACCAGTGTACTGTTTTTTATTTACCGATTTT-GAGCTAGGCTCTCCGTTCT
GCTGTAACTTCAGATTTTCT-T-CTTGTTGATGGATTATCACTTGGGGGATCACCAGGAGGGAAAGTCACAGAAACTGGG
CCGGATTGTACCAGCAATAATATTCTTGGCTCGAG-TTCTTTGATGCTACACATCATATAAAAAAAGCTTTGTCT----A
AAAAATCACATAAAAAAGCTCACTCGAGAACGAATAGCGGATATATTTATTGTGACTTTATTATACCATCCTTCGCCGAA
CTGCAATGTCCTCCAAATTGACGCAGCTCTTGGAGGCTTA-AGG------------GTGTTGGTTCTGAACTTTTGATAG
GTTTGTTCTGAACTTCTGATATGCCAAACAAGTCAGAACTTCTGATAGGTGATCAGCATTACAACTTCTCGATTCGCTGA
ATGATCAGGTCTCTCTCCTCGTCAAGTTCATCTTCACCTGTAAGATGGAACAA-AAAAAATTACATATGCGGGTTTTTGT
GGTGGTTGACATCATGGCTTCAAGTCTAAACTCAGAACAACCAGAAGC-GGGTTTCCTGACTACTCCATCCTTCTTTTGC
AATTTTAAGCTGGTCTGTAATGGGCTCTAAGATGGAAACTTCACAGCACTACCTTTACTTGCA-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------GGAAGATCGTGGAGTAGTTTCAAC
AATTCTTTGCGATTGTCTCGTAAAGCTTCAATAATACCA-------GGAGGCTTGTTTGGATTGGCAACGAACACCTAAT
TCCACACAGGGAAATGGACCAACAAAAATTGTTACAAGGAATTTGTTTGACGGGGAAATACAGTGTACGTGCACTTG---
-AAGATGGTACCTTAAAAACGTGGAAGGCACATATTTTGATATTTTTGCTTGAATCCTACAAAGGATGCCGGTTAGTAGT
AACACTCCTACAAATAGATAGGATCTGTACATACATAATATTTAATAATATTTGTGCAGAAATGGAGAATCTTTC-----
--------ATGCAAAAAATCAATGTTAAG-AAAGTTTGCAAGCTTTTATTTCTCATAAATGAAGCCTTTCAAATGTATAT
TCACGTCTGAACTTCCAGACAACTGCTGGAACATTTGGCTAAGAGATAAGAATGTTCAAGACAGTATTTTTTTTTTC---
-------TTTTGACAGAACCTCGTCAAGAGGGCTGGGAGCTCTTGC-
>chr3B_1
ACACTATAGCAACTTCAGTGTAAAATTATGACAACTTTTGGCCCAAGAAAAAGTCA-CGAAACATGTTAATATTGTATTT
AGGTTTGAAGATCTCGTCGAGACGGATTTAATGTTGAAAATGTATTTTTAATCGGAATTTTTATTTAAGAGA---AATAT
TTTTAAGTCTGAAAAACCAAAAGGATTTCGCTAATGTCATCTGTTTGATGTGGCAAAATGGATAGTAATGAGGAAGCTTG
AATCATATTACTTTATGCCACACGTGTGGCACTTATCATTCGGGCTAATTAATATACGAGATAAATCTTTTGTCTCCATT
TAAAAAAGG---AAGAAAAGGATA-TCGATGACATGCTAGATAGTCATCAATTAAGCTCCCACAAAATGTTGGCATGTGG
TGGTCCAAGGCTTTGGGCA---------------CATGTAAGTGGGTGCCTCATAGGTGCAGCGTTTTAGGCCCACTAGC
AGCCAATTCTGATGGTCGTAACCCAGTCTCATCTTTCTACCCCCTTTCTTCTGTTGT-TTC-------------------
---------CTCCTCAATCTGCTTTAGAGCATCTATAGCTGAACCTGACGAATTCGACCCTTTAAACGTCCGCAGATGCA
TGCGGCGTGATCTTGGACAGCGACGGACGGCCCCTCAAATGTCCTATTGAACAATCACACTCCTTAACCCTCAAATTCAT
GTACGTTGATCATATAGTACAAATTCATCACAATTAAGTCCATACAAAAACGAGC--CAAAAGCTAGCCAAATTTAGTGG
TCTATATCCGCAACACTATTAAGGACCGTTCATCTGCGCGGCAAAGCGCGCCTTTCCATCTAGA---ATTCCCGAGGAAT
ATGATACCCGTCTCTCGTCGGCTCATCTGTTGAGTTTGTGCGCGGAGCATCTCATCTGACGGAAAGCCAAGATGTAGCGA
AATGCGTCCCCATCTCTTTCACTTCACCAGGAAGCTGAGTATAGATCATTTGCCTATATACAAAGCGCAGTTTGTTTCTC
CACTTCGCAGCATCCGAAGTTTGTCT-----TTCGTACAGCAGTGATGCAGATGAACAACAAGGAGCCGGCCGCCGACGG
CAAGACGCCGGTTACCATCTGCAGCAGGCTTCAAAGAGCCTTCCACGCTCGGCCGGTCTTCGGGCCTCTTCGCCGCCTCA
CGGGCCAACCCCATGACGGCGGAGCTGCCGCTACCGGCGTACCCTCGGGAGCGCCTGCCGCGACGCACGGTGGTGCACCG
CCACCGACTGTATTGCCGGCACGTGCACCGGCGCCGTCTCCAGTAGGCAAAGCTCCGGCACCTAAGGCGGCACCGGTGAT
CCTGCCCGCGGTGCCACAGAAACCGGCTGCTGCCAAGGGAGGTGGCAAGCCTGGGCAGGTCCTCGGGAGCACTCCTACCG
TCGCTGCAACCACGAGCAAGGTTCCCGAGAAGGCGGCAGGGGGGATCCCGGTACCGGTGCCACCGCCGGCGGTCATGGCT
GGAAGGCCGGCAGCGGACGCGAAGGCTGGGGACAACAAGGCGCAGCAGACAAAGGGGAAGATCAGGGTGAGCTCCAGGGT
CCGCAAGGCCTTGGCCTCATCCAAGTAGAGGCATGATCAACTGAATCGCCAGGGTGCGCGCCAAGAACGGAGCTAGCTGA
ATTACGCATCTCCAACGCCATTCTCTTTTACCAGTGTGCTGTTTTTTATTTACCGATTTT-GAGCTAGGCTCTCCGTTCT
GCTGTAACTCCAGATTTTCTAT-CTTGTTGATGGATTATCACTTGGGGGATCACCAGGAGGGAAACTCACACAAACTGGG
CCAGATTGTACCGGAAATGATATTCTTGGCTCGAG-TTCGTTGATGCTACACATCACATATATCTATTTATTTTGCAACT
CGGAAAAAAAAGA-------------------------GGATCTATTTATTGCGCTTTTATTATACTATCCTTCGCCGAA
CTGCAAGGCCCTCGAAATTGAGGCAGCTCTTGGAGGCTTGCAGGGATATATACCGTGTGTTGCTTCTGAACTTTTGATAG
GTTGGTTCT--------------------------GAACTTCTGATAGGTGATCAGCATTACAACTTCTCGATTTGCTGA
ATGATCAGGTCTCTCTCCTCGTCAAATTCATCTTCGCCTGTAAAATGGAACAA-AAAAT-TTACATACACGAGTTTTTGT
GGTGGTTGACATCATGGCTTCAAGTCTAAACTCAAATCAACCACAGGC-AGGTTTCCTGACTACT-TATCATTCTTTTTC
AATTTCAAGCTGGTCTGTGATGGGTTCCAAGATGGGAACTTCACAGCACTACCTTTACTTGCAAT---------------
--------------------------------------------------------------------------------
----------------------------------------------------------AAGATTGTGGAGTAGTTTCAAC
AATTCTTTGCGATTGTCTCGCAAAGCTTCAATAATACCA-------CGAGGCTTGTTTGGATTGGCAACGAACACCTAAT
TCCGCACAGGGAAATGGACCAAAAAAATTTGTTAGAAGGAATTTGTTTGACGGGGAAATACAGTGTACGTGCACTTG---
-AAGATGGTACCTTAAAAACGTGGAAGGCACATATTTTGATATTTTTGCTTGAATCCTACAAAGGATGCTGGTTAGTAGT
AACACTCCCACAAATAGATAGGATCTGTACATACATAATATTTAATAATATTTGTGCAGAAATGGAGAATCTTTC-----
--------ATGCAGAAAATCAATGTTAAGAAAAATTTGCAAGCTTTTATTTCTCATAAATGAAGCCTTTCAAATGTATAT
TCACGTCTGAACTTCCAGACAACTGCTGGAACCTTTG-------------------------------------------
-----------------------------------------------
>chr6D_2044
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--------------------------------------------------------------------------TGATAA
GTTGGTTCTGAACTTCTGATACACCAAACAAGTGAGAACTTCTGATAGGTGATCAGCATTACATATTTTCAATTTCCTGA
ATGATCAGGTCTTTGTCCTCGTCAAGTTCTTCTTCGCCTGTGAAATGGAACAA-AGAAAATTACATACACAAGTTTTTGT
GGTGGTTGACATCATGGCTTCAAGTCAAAACTCAAATCAACCACACGATGGGTTTCCTGACTACTCTATCATTCTTTTTC
AGTTTCAAGCTGGTCTATGATGGGTTCTAAGATGGGAACTTCACAGCACTACCTTTACTTGCAGGCAGTGGTGGAGCGTA
CACCAAACTTAAGGAGGGGCCAAAATGAAATCAAGGCATATAAACAACTAAGGTGATCAGACTGGCCGAATAATTAGTAG
GAAGTTTACCAAAGGGGAAGCTTATCTGGTCACCCGAGGCTCCGCCACTGCTTGCAGGAAGATTGTGGAGTAGTTTCAAT
AATTCTCTGCGATTGTCTCGCAAAGCTTCGATAATATCGCTATTCGCTAGGCTTGTTTGGATTTGCCACGAACACCTAAG
TCGGCACAGGGAAATGGACCAACAAAAATTATTAGAAGGAATTTG-TTGACGGGGAAATACAATGTGCGTGCACTTATAT
AAAGATGGTACCTTAAAAACGTGGAAGGCACATATTATGATATTTTTGCTTGAATCCTACAAAAGATGCCGGTTAATAGT
AACACTCCTACAAATAGATAGGATATGTACACACATAATATTTG-TAATATTTGGGCAGAAATGGAGAATCTTTTCACGC
AAAAAAGTATGTGTTTAATCAACATTAAG-AAAATTTGCAAGCTTGTATTTCTCACAAATGAAGCCTTTCTGATGTATAT
TCACGTCTGAACTTCCAGACAACTGCTGAAACCTTTGGATAGGAGATAAGAGTGTTCAAGACAG----------------
-----------------------------------------------
>chr4B_2046
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----------------------------------------------------------------------------ATAG
GTTGGTTCTGAACTTCTGATAGGCCAAACAAGTAAGAACTTCTGATAGGTGATCAACATTACAAATTCTCAAATTCCTGA
ATGATCAGGTCTCTCTCCTTGTCAATTTTATCTTCACATGTAAAAGGCAACAA-AACTTATGGCTT---CAAGTTTTTGT
GGTGGTTGACCTCATGGCTTCAAGTCAAAACTCAAATCAACCACACGC-AGGTTTCCTGACTACTCTATCATTTTTTTTC
AGTTTCAAGTTAGTCTGTGATGGGTTCTAAGATGGGAACTTCACATCACTACCTTTA-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------CTTGCAGGAAGATTGTGTAGTAGTTTCAAT
AATT---TACAATTATCTCACGAAGTTTTGATATACT--------GCGAGGCTTGTTTGGATTGGCCACAAACACCTAAT
TTGGCACAGGGAAATGGACCAACAATAATTGTTAGAAGGAATTTGCTTGATGGGGAAATACAATATGCATGCACTTATAT
AAATATGGTACCTT-AAAACGTGGAAGGCACATATTCTGATTTTTTTGCTT-AATCCTACAAAAGATGTCGGTTAATAGT
AACACTCCTGAA---AGATAGGATCTGTACACACATAATATTAG-TAGTATTTTTTCATAAATGGAGAAACTTTTCACGC
AAAAAAGTATGTGTCTAATCAAAGTTAAG-AAAATTTGCAAGGTTGTATTTCTCACAAATGAAGACTTTCAGATGTATAT
TCATGTTTGAACTTCCATACAACTGTTGGAACCTTTGGATAGGAGATAAGAGTGTCGAAGACATATCTTTTTTGGCAAGA
A----------------------------------------------
>SNPs
--------------------------------------------------------------------------------
--------------S---------------------------S-----------S-------------S-----------
---------S-------------S-S---------------------------------S----S--------SS-----
--------------------------------------------------------------------------------
-----SSS-SSS-----SS-----S--------------------------------------------S----------
-------------------------------S------------------------------------------------
-----------S-----------------S-------------------------------SSSSSSSSSSSSSSSSSSS
SSSSSSSSS-------------------------------------------------------------------S--S
--S-------S----S-S------------------------------------------------S-------------
--------------------------------------------------SSS-SSS-----------------------
-----------------------------------------------------------------------S--------
--------------------------------------------------------------------------------
--------------------S-------S---------------------------------------------------
---------------------------SSSS-------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
-------------------------------------------S--------------------S----S----------
--------------------------------------------------------------------------------
------------S----------S----------------------------------------------S---------
--------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
-------S-------------------S--------------------------------S-------------------
----------------------S----------S----------------------------------------------
--------------------------------S--S------------------------------------------S-
-------------------------S----------S-S-----------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
-----------------------------------------------------S--------------------------
-------------------------S------------------------------------------------------
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
----------S-------------S---------------------------S----------S----------------
--S--------------------------S-----------------------------S--------------------
--------------------------------------------------------------------------------
-------------------------S--S-----SS-----------S--------------------------------
--------S----------S-----------------S------------------S------------------S----
-SSSSSS----S------------S--------S------------S
>forward_565
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-----------------------------------------------------------------TTTCGCGTTTGCTTT
CCTGG---------------------------------------------------------------------------
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>reverse_1688
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-------CTCTCCAAAGCCATTCTCTGC----------------------------------------------------
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-----------------------------------------------
>forward_981
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-ATGCGTCCCCATCTCTTTCC-----------------------------------------------------------
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>reverse_3065
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------------------------AAAGAGGGCAGGGAGCTCTT---
