>input_sequence_66332
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--------------ATGATGGATCACCTGAGCCTGGTGCCCTACGAGGGAGGCAGCGGCGCCGGGGGCGACGCCGGGGCC
AAGTACAAGGAGTGCATGCGCAACCACGCGGCTGCCATGGGCGGCCAGGCCTTCGACGGCTGCGGGGAGTACATGCCGGC
CTCGCCCGACTCGCTCAAGTGCGCCGCATGCGGCTGCCACCGCAGCTTCCACCGTCGCGCGGGTAGCCTCACTGGTGGGG
CGTGCCCGGCGCCCTTCTTCTTCAGCCCGCCTCCGCCGCCGCCCCCGCACCATCACCCGCCGCCGCACCACCCCGTGCTG
CAGGGCTTCCTCCCGTCGGCGCCCCCGCGGCCGCCCCAGCTCGCGCTGCCGTACCACGCCGTGCCCGCCGCGTGGCACCA
CGCCCTGCTGGACCCCGCGCGGGCCGGCTCGGAGACGCCTCCCCGGGCGGACGACTGCAGCCCCGGGTGCGGGAGCGGAA
GCTTCGGGAGGAAGCGGCACCGGACCAAGTTCACCCCGGAGCAGAAGGAGAGGATGCGCGCCTTCGCCGAGAAGCAGGGG
TGGCGCATCAACCGCGACGACGGCGGTGCCCTCGAGCGCTTCTGCCTCGAGATCGGGGTCAAGCGGAACGTCCTCAAGGT
CTGGATGCACAACCACAAGCACCAGCTCGCCTCGCCCACCTCCACCGCGGCCGGCATCGGCATGGGCATGGGGATGGGCA
TCGGCATCAACCCAGGAGTCCTCGGCACTGGCACTGGGACCGGCGCTGGCGCTGGCGTT------GGCGTTGGCGTTGGA
GCGGGCACCGGCGATGGAGACGGCGACGACGACGACACGGACGACGACTCGCCTCCACGCGCCGCCGTCTCGTCGCCCTC
CCCCTCCCCCATCAGCGTCTAG----------------------------------------------------------
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>chr2B_1_TraesCS2B01G322200
GCTGGCCCAGTCTCCCGAATGTGCTCATAGGGTTATAGTGTGCGTGTGTATTCATCGGATGAGTGTATGTGCGTTTGTAT
GAGCGCCGCGTCTGTACTGTCTTAAAAAAACATGGACACCGAAATTGGAGAAATCCACGCTGACATTTGAGTCCCGTGAC
GGGCCATATTTTCTGTGCCGTGTAATTAAATCAGCTGCAAATATCGTCATCTAATTGACAGAGAGC---ACCAAGGTTGG
AGCT--AACCCCCTGGCAACAGGATTGGGCAGACAAATACTGGGCACAGAAGATCAGCTAAGATGCCGTACCCCACGGCC
GCTTGGGTGGCAGTTAGCCCATACCTCATCTCCCCGTCCGATCGCATCAGGGCCGTCCGTCCGCGGAGGTCCCATCATCA
TCTGACGCCGAGTAGTACACCACGGCACCCTCACGTGGCGGGCCCGAGCGGTTACTGTTGTTGTAACAATGGTATCCGGC
CCCAATGCCGGGTCGACACGTTGCCGCTGTTACCACCCATCGTCGAGTCCCGTCTCACGTGGCGCCTGCAGGCACCCCTT
CCCGCTTCCACGTGGCACCGCGCGCAAACGTGATCTCGCCGCCTCATCAACTAGTATCACAAAGCAGCATAGCAGA----
--------------------------------------------------------------TCA---------------
-----------------GTTTTACTGTATGTAAAATATTGCTTTTACTGTGTGTACTGCTG-------CTTCATTGCACT
ACCTATAGTCACTAGTAGTACCAATAATTATTCTTATTATTCTGTGAGTACTAGTAGTATGAGGGCCAAAGTCGTCGCAT
TAATTAACGAACTAATTTATGCTTCGCACCTGATGGATGACGGAGGTCTGCGTGCAGATAAAACCCCCTAGCTCCTCCCC
TCCTA----GGCCGGTGGTCGCTTCTACCGCTGCTGCGAAAGCGATACGCC-----TTCCTTCTTCT--------AGCGA
GCGAGAGTGGCCACCCGCGACCGGGTGGGT----GAGCGAGCGCGTGAGTGGTGGTGGTGGGAA---GGGAGCGAGCTCT
CCTCTCGTGCGGACATGATGGATCACCTGAGCCTGGTGCCCTACGAGGGAGGCAGCGGCGCCGGGGGCGACGCCGGGGCC
AAGTACAAGGAGTGCATGCGCAACCACGCGGCTGCCATGGGCGGCCAGGCCTTCGACGGCTGCGGGGAGTACATGCCGGC
CTCGCCCGACTCGCTCAAGTGCGCCGCATGCGGCTGCCACCGCAGCTTCCACCGTCGCGCGGGTAGCCTCACTGGTGGGG
CGTGCCCGGCGCCCTTCTTCTTCAGCCCGCCTCCGCCGCCGCCCCCGCACCATCACCCGCCGCCGCACCACCCCGTGCTG
CAGGGCTTCCTCCCGTCGGCGCCCCCGCGGCCGCCCCAGCTCGCGCTGCCGTACCACGCCGTGCCCGCCGCGTGGCACCA
CGCCCTGCTGGACCCCGCGCGGGCCGGCTCGGAGACGCCTCCCCGGGCGGACGACTGCAGCCCCGGGTGCGGGAGCGGAA
GCTTCGGGAGGAAGCGGCACCGGACCAAGTTCACCCCGGAGCAGAAGGAGAGGATGCGCGCCTTCGCCGAGAAGCAGGGG
TGGCGCATCAACCGCGACGACGGCGGTGCCCTCGAGCGCTTCTGCCTCGAGATCGGGGTCAAGCGGAACGTCCTCAAGGT
CTGGATGCACAACCACAAGCACCAGCTCGCCTCGCCCACCTCCACCGCGGCCGGCATCGGCATGGGCATGGGGATGGGCA
TCGGCATCAACCCAGGAGTCCTCGGCACTGGCACTGGGACCGGCGCTGGCGCTGGCGTT------GGCGTTGGCGTTGGA
GCGGGCACCGGCGATGGAGACGGCGACGACGACGACACGGACGACGACTCGCCTCCACGCGCCGCCGTCTCGTCGCCCTC
CCCCTCCCCCATCAGCGTCTAGCCGTGCTAGCGCTAGCTAATGAGCACGGAGTTCTTTTAATCGCCAGGGCTTTAGATTT
AATTAATGCACTCTCAGTCAGTTGTCAGCGAGCAGCTGGTGTAAACGACCCCC-TGATCCCCCGCATGCCTCCCCCGCAG
CGGCCGTGCCGTACATCGTGGTACCGGACCGAGGGCATATTTGTACCCCTACTCTAATTCTAGCTAGGCGCCGCTGTTTG
TAGGTTCATTATCTTTCTTGTCTTGCTTTAATCCTAGTACTACTTGTACTACTACCAGTGCTAGACAAGTGTAGTAGCTG
CAGTGAGTGACTAATCATCGTACCCC------TGTCAAGATTAATGCCGCATTAATTCTTCCATGT-CAGTAGAGTGCAT
CAGGATTTTGTGCCTGGAAGCTTCTCTAAGAGCATGGTTAATAGTATAGCCAGCGGCTGGCTATAAGCCAGTGCCATGTC
ATCTACAACCCATCTTATAGCTAACATGTACAATAGTAAATAAAAAAATGTACTACTTTTTTATTATGTGGCCCACCTTT
CATTCTCACAAAGTGCCTAGGAGCACGTGTTAGAGCTGTCTGTTCACGAAGAGCCCGCTTACCTTCTCTCTCCTCTTCTC
TTTCTTCTAACTAAGCAGAAATATACTAGTTTATTTCTTATAGCCCGCTGACTAAGCTCTATTGTACTTGCTCTAAATTG
CAATGTGTGTTGGTTTGGTTTGGTTTTGTCGTACTCGTGTGGCTTTG---------------------------------
---GGCTGGAGTGCCACCTCGTAATCGGCCGGCCTGCTCTCC------------------------------GTGGTGGC
CTGAGATTTTTGTTCCCATTTGCGCCCTCCGGTCCGGCCGGCCGGGCCGAGTGGTAGGCCGCGCCGCGGTGGTGGAGCCG
GCCGGAGCTTGGCCGAGCACGCCCGCCAAGCTTGGCGTTCTACT---GGTGCTGTTGCGTGGGGTCGAACGTTGCCCTTG
TGTCCGTCCGTGCCGACTGAGTTGTCTCATCGGCTTGGG--TGTGGTGTGTGATGATGGCG
>chr2A_109
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----------------------------AACATGGCCACCGAAGTTCGAGAAATCCACGCTGACATTTGAGTCCCGTGAC
GTGCCATATTTTCTGTGCCGTGTAATTAAATCAGCTGCAAAGATTGTGATCTAATTGACAGAGAGT---AACAAGATTGG
AGCTAGAACCCCCTGGCAACAGGACCGGGCAGGCAAACACGGGGCACAGAAGATCAGGTAAGATGCCGTACCCCACGGCC
GCTTGGGTGGCAGTTAGCCCATACCTCATCTCCCCGTCCGATCGCATCAGGGCCGTCCGTCCGCGGAGGTCCCATCATCA
TCTGACGCCGAGGAGTACACCACGGCACCCTCACGTGGCGGGCCCGAGCGGTTACTGTTGTGGTAACAATGGCATCCGGC
CCCAATGCCGGGTCGACACGTTGCCGCTGTTATCACCCTTCGTCGAGTCCCGTCTCACGTGGCGCCTGCAGGCACCCCTT
CCCGCTTCCACGTGGCACCTACAAAGCATAGCCTCAGTCTCTGAGTAAATTGGTTAACAGATGACCATGCGACAAGCGTG
GTAAAAGCAATCTCAAATTGACAAAAATTGGTTAACAGATGAGCTTCACTTACTGTACGACGTAAAAATAAATTTTTTTG
CTGGTAGACGTA-------------------AAAATATTGCTTTTACTATGTGTAGGTACTGCCAGTACTTCTTTGCG--
-----------------GTGCCTATAGTCAAATTAATTTATTCTCATTCT------GTATCAGGGCCAAAGTCGTCGCAT
TAATTAACGAAGTAATCTATGCTTCACACCTGATGGGTGACGGTGGTCCGCGCGCAGATAAAACCCCCTAGCTCCTCCCT
TCCTTGCTTGGCCGGTGGTCGCTTCTACCGCTGCTGCGAAAGCGATACGCCTTCCTTTCCTTCTTCTGGCGAGGGAGCGA
GCGAGAGTGGCCACGCGCGAGTGGGTGGGTGAGCGAGCGAGCGCGTGAGTGGTGGTGGTGGTGGGACGGGAGCGAGCTCT
CCTCTCGTGCGGACATGATGGATCACCTGAGCCTGGTGCCCTACGAGGGAGGCAGCGGCGCCGGGGGCGACGCCGGGGCC
AAGTACAAGGAGTGCATGCGCAACCACGCCGCCGCCATGGGCGGCCAGGCCTTCGACGGCTGCGGGGAGTACATGCCGGC
CTCGCCCGACTCGCTCAAGTGCGCCGCCTGCGGCTGCCACCGCAGCTTCCACCGCCGCGCGGGTAGCCTCGCGGGCGGGG
CCTGCCCGGCGCCCTTCTTCTTCAGCCCGCCCCCGCCGCCGCCCCCGCACCATCACCCGCCGCCGCACCACCCCGTGCTG
CAGGGCTTCCTCCCGTCGGCGCCCCCGCGGCCGCCCCAGCTCGCGCTGCCGTACCACGCCGTGCCCGCCGCGTGGCACCA
CGCCCTGCTGGACCCCGCGCGCGCCGGCTCGGAGACGCCTCCCCGGGCGGACGACTGCAGCCCCGGGTGCGGGAGCGGGA
GCTTCTCGAGGAAGCGGCACCGGACCAAGTTCACCCCGGAGCAGAAGGAGAGGATGCGCGCCTTCGCCGAGAAGCAGGGG
TGGCGCATCAACCGCGACGACGGCGGCGCCCTCGAGCGCTTCTGCCTCGAGATCGGCGTCAAGCGGAACGTCCTCAAGGT
CTGGATGCACAACCACAAGCACCAGCTCGCCTCGCCCACCTCCGTCGCGGCCGGTATGGGCATGGGCATGGGGATGGGCA
TCGGCATCAACCCAGGAGCCCTCGGCACCGGCACTGGGACCGGCGCTGACGCTGGCGTTGGCGTTGGCGGTGGCGTTGGA
GCGGGCACCGGCGACGGCGACGGCGACGACGACGACACGGACGACGACTCGCCTCCACGCGCCGCCGTCTCGTCGCCCTC
CCCCTCCCCCATCAGCGTCTAGCCGTGCTAGCGCTAGCTAATGAGTACCGAGTTCCTTTAATCCCCAGGGCTTTAGATTT
AATTAATGCAGTGTCAGTCAGTTGTGAGCAAGCAGGTGGTGTAAACGACCCCC-TGATCCCCCGCATGCCTCCCCCGCAG
CGGCCGTGCCGTACATCGTGGTACCGGACCGAGGGCATATTTGTACCCCCACTCTAATTCTAGCTAGGCGCCGCTGTTTG
TAGCTTCATTATCTTTCTTGTCTTGCTTTAATCCTAGTACTACT---------ACCCGTGCTAGACTAGTGTAGTAGCTG
CAGTGAGTGACTAATCATCGTACCCC------TGTCAAGATTAATGCCGCATTAATTTGTCCCTGGACAGTAGAGTGCAT
CGGGA-TTTGTGCCTGGAAGCTTCTCTAAATTGCAGTTGCAG--------------------------------------
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----------TGTTTTGGTTTGGTCTGGTCGCACTCGTGTGGCTTTA---------------------------------
---GGCCGGAGCGCCACCTCGTAATCGGCCGGCCTGCTCTCCAGCCAGCATC----------GCCTTGGCCGGTGGTGGC
CTGAGATTTTTGTTCCCATTTGCGCCCTCCGGTCCGGCCGGCCGGGCCGAGTGGTAGGCCGCGCCGCGGTGGTGGAGCCG
GCCGGAGCTTGGCCGAGCACGCC-GCCCGGCTTGGCGCTCTACT---GCTGCTGTTGCGTGGGGTCGAACGTTGCCCTTG
TGTTCGTCCGTGCCGACTGAGTTGTCTCATCGGCTTGGGAGTGTGGTGTGTGATGATGGCG
>chr2D_115
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----------------------------------GACACCGAAGTTGGAGAAATCCACGCTGACATTTGAGTCCCGTGAC
GTGCCATATTTTCTGTGCCGTGTAATTAAATCAGCTGCAAATATAATGATC-AATTGACACAGAGAGCAACAAAGATTGG
AGCTAGAACCCGGTGGCAACAGGACCGGGCAGGCAAACACTGGGCACAGAAGATCAGGTAAGATGCCGTACCCCACGGCC
GCTTGGGTGGCAGTTAGCCCATACCTCATCTCCCCGTCCGATCGCATCAGGACCGTCCGTCCGCGGAGGTCCCATCATCA
TCTGACGCCGAGTAGTACACCACGGCACCCTCACGTGGCGGGCCCGAGCGGTTACTGTTGTGGTAACAATGGTATCCGGC
CCCAATGCCCGGTCGACACGTTGCCGCTGTTACCACCCTTCGTCGAGTCCCGTCTCACGTGGCGCCTGCAGGCACCCCTT
CCCGCTTCCACGTGGCACCGCGCGCGAACGTGATCTCGCCGCCTCATCATCAA----CACAAAGCAGCATAGCAGA----
--------------------------------------------------------------TCAAGATCAGTTTTACTG
TTGGTAAAATATTGTCAGTTTTACTGTTCGTAAAATATTGCTTTTACTGTGTGTACTGCTG-------CTTCTTTGC---
-------------AGTAGTGCCTAGAGTCAAATTAATTATTCTGTGAGCA----TAGTATGAGGGGCAAAGTCGTCGCAT
TAATTAACGAACTAATTTACGCTTCACACCTGATGGGTGACGGTGGTCCGCGCGCAGATAAAACCCCCTAGCTCCTCCCC
TCCTT----GGCCGGTGGTCGCTTCTACCGCTGCTGCGAAAGCGATACGCC-----TTCCTTCTTCTAGCGAG----CGA
GCGAGAGTGGCCACGCGCGAGTGGGTGGGTGAGCGAGAGAGCGCGTGAGTGGTGGTGGTGGGAA---GGGAGCGAGCTCT
CCTCTCGTGCGGACATGATGGATCACCTGAGCCTGGTGCCCTACGAGGGAGGCAGCGGCGCCGGGGGCGACGCCGGGGCC
AAGTACAAGGAGTGCATGCGCAACCACGCCGCTGCCATGGGCGGCCAGGCCTTCGACGGCTGCGGGGAGTACATGCCGGC
CTCGCCCGACTCGCTCAAGTGCGCCGCCTGCGGCTGCCACCGCAGCTTCCACCGCCGCGCGGGTAGCCTCGCGGGCGGGG
CGTGCCCGGCGCCCTTCTTCTTCAGCCCGCCCCCGCCGCCGCCCCCCCACCATCACCCGCCGCCGCACCACCCCGTGCTG
CAGGGCTTCCTCCCGTCGGCGCCCCCGCGGCCGCCCCAGCTCGCGCTGCCGTACCACGCCGTGCCCGCCGCGTGGCACCA
CGCCCTGCTGGACCCCGCGCGCGCCGGCTCGGAGACGCCTCCCCGGGCGGACGACTGCAGCCCAGGGTGCGGGAGCGGGA
GCTTCTCGAGGAAGCGGCACCGGACCAAGTTCACCCCGGAGCAGAAGGAGAGGATGCGCGCCTTCGCCGAGAAGCAGGGG
TGGCGCATCAACCGCGACGACGGCGGCGCCCTCGAGCGCTTCTGCCTCGAGATCGGCGTCAAGCGGAACGTCCTCAAGGT
CTGGATGCACAACCACAAGCACCAGCTCGCCTCGCCCACCTCCACCGCGGCCGGTATGGGCATGGGCATGGGGATGGGCA
TCGGCATCAACCCAGGAGTCCTCGGCACTGGCACTGGGACCGGCGCTGGCGCTGGCGC------TGGCGTTGGCGTTGGA
GCGGGCACCGGCGACGGAGACGGAGACGACGACGACACGGACGACGACTCGCCTCCACGCGCCGCCGTCTCATCGCCCTC
CCCCTCCCCCATCAGCGTCTAGCCGTGCTAGCGCTAGCTAATGAGTACCGAGTTCTAATAATCGCCAGGGCTTTAGATTT
AATTAATGCACTGTCAGCCAGTTGTGAGCAAGCAGGTGGTGTAAACGACCCCCCTGATCCCCCGCATGCCTCCCCCGCAG
CGGCCGTGCCGTACATCGTGGTACCGGACCGAGGGCATATTTGTACCCCCACTCTAATTCTAGCTAGGCGCCGCTGTTTG
AAGGTTCATTATCTTTCTTGTCTTGCTTTAATCCTAGTACTACC---------ACCAGTGCTAGACTAGTGTAGTAGCTG
CAGTGAGTGACTAATCATCGTGCCCTGTCAAGTGTCAAGATTAATGCCGCATTAATTTGTCCCTGG-CAGTAGAGTGCAT
GGGGA-TTTGTGCCTGGAAGCTTCTCTAAATTGCAGTTGCAG--------------------------------------
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----------TGTTTTGGTTTGGTCTGGTCGCACTCGTGTGGCTTTAAGCTCTTTTTTTTTTTTGAATGTTGGTGTGGCT
TTCGGCTGGAGTGCCACCTCGTAATCGGCCGGCCTGCTCTCCAGCCAGCATCGCCGCCTCCTGCCTTGGCCGGTGGTGGC
CGTAGATTTTTGTTCCCATTTGCGCCCTCCGGTCCGGCCGGCCGGGCCGAGTGGTAGGCCGCGCCGCGGTGGTGGAGCCG
GCCGGAGCTTGGCCGAGCACGCC-GCCCGGCTTGGCGCTCTACTGCTGCTGCTGTTGCGTGGGGTCGAACGTTGCCCTTG
TGTCCGTCCGTGCCGACTGAGTTGTCTCATCGGCTTGGG--TGTAGTGTGTGATGATGGCG
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------S------------------------------------
-S------------------------------------------S--S-----------------S---------S----
------------------------SS------S----S-------------------S----------------------
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-------------------------------------------------------------S------------------
--------------------------------------S-----------------------------------------
-------------------------S-----------------------S-S-S--S-----------------------
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---------------------------SS-------------------------------------------S----SSS
SSSSSSSSSSSSS------S--S---S-S-SSS-S-------------S-SSSS--------------------------
-------------------------S----------S------S----S---S---------------------------
----S---------------------------------------------------------------------------
--------------S-----SS----------------------------------------------------------
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-----------------------------S--------------------------------------------------
---------------------------S--------------------------S---------------S-S--S----
-------------------------------S------------------------------------------------
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---------------------S--------------------------------------------------------S-
-----SS-------------------------------------------------------------------------
--------------------------S-----------------------------S-----------------------
------------------------------------------------------S--S----------------------
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--------------S-----------------------------------------------------------------
---------------------------------------------S--S-------------------------------
------------S------------S---S-----S--------------------------------------------
-------------------------------------------------S------------------------------
--------------------------------------------SSSSSSSSS-------------S-------------
---------------------------------------------------------SS---S--S--------------
-S---S-----------------------SSSSSS-S-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSS--S-----------S-S----S--------------S---------------------------------
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-----------------------S---SS--------S----------S-------------------------------
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>forward_104
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----GCCGCGTCTGTACTGTCTTA--------------------------------------------------------
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>reverse_2110
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-----------------------------GAGCAGCTGGTGTAAACGAC-------------------------------
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