>input_sequence_66241
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---------------------------ATGGCATTTTTTTTTTTTGCGAATAGAATAGCATTCAAGACCGATCCGTCCCG
ACGTGATCTCGCCACCAAACCAGATGCAAACCATAG------------------------------GAGAAAACATAAAC
ACCTTCGTCCTGGTCGGACGCAGCGGCCACAGCTCCACTACTTCCTCTCCGGCATCTACTTAAGATCTTCAAAGGTTTTT
CTTGCGATAAGGAACTGCAAAGGTGAGCTTACTTCTTCTGCTTCTGCAAAGGTGAGCTTACTTCTGTTGCGCTTCTCCCT
TCGGCTTTGTTGAATCCAGAACCAGGAGAAACATGACGCTGGATCGTGGGCGCAGCCGTTCCTGAGCCGAGGTGTATCTT
GATGTGCAGAAGATGCCGACGTTGAGCATCACGGTGGACATGGGGTGCAGCCGCTGCAGCGCCAAGATTCAGAGGGTCCT
ATCCTCCATCCAGGACCGAGGCAAGTTTGTCATCGAGAAGATCGTGTACGAGGATAAACGGGTGCTCGTGTCGGGGCCCT
TCGACGCCGACAAGCTGACATGCAAGCTCTGGTGCAAGGCCAGCAACGTCATCAAGAACATTGAGGTCGTCAAGCCGCCG
GTGGTAGCCAAGCCGAAGGACGACCCTCCCAAGCAGAAGAAGCAAGACGAGAAGCCCGAGACCAAGCCAGCCCCGTGCAA
CCAGCTGGTCCCGTACGCGTAC------CCGTACCCGCTGCCGTACCCATCGGCGTGGCCGTGTGGCTGCGGTACGCCGT
GCTGCGAGGGCCACTCCAAGCCGCCCCCT------CCGGCGCCGGCGCCCACGTGCCAGTGCCCGGC-------------
-----------CTACCCGCCGTACCAGCAGCCGATGCCCATGCCGTGCACGCCGATGGTCATCTGCGAGGAGAGCCCGCC
CGCCTGCTCCGTCATGTAA-------------------------------------------------------------
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------------------
>chr2B_1_TraesCS2B01G305600
GGCGAGTAGCGACATACCACACGCCGCCTGCAACATGGACTGGTATGTGTGGAGCCACCGCTTCTCCGCATGTTCGAATT
GTGGATCTCCGCTGCCGAATCGCCCTAGGCCGCATGCCG--GTACTTCTCCAGCAGCAGCGATGACTGAGACATGGATCT
CGAGCGGGAGGTGGCGGCGGGTACTCGGGTGGCTGCGCCGACCCATTCCGGACGAAATGCGAATACGGGGTGGCCCTCCT
CATCTACGAGCTCATGGTAGCAGCCATGACTAGATTCATCGATTCACATGATGTCGGTAGGCGGTGGTCAATCAAAGTGT
GCAG-GAGGATGGCGGGGGCTGCACGGTGGCCGACGGGGGAAAGGAAAGCGGCGGAGGCAAGAAAGTTGGTGCCTGCGTG
GAGGCAACCGAGCTAGGGAGAGTGACATCCAAGCCACAAAGGGAATCTTTTTTGCTGAGAAGTGGCTTCGGCCGCTCAAA
TTTGAGGCGCAACCGATATGCCGCCTTCTTTC-TTGAGAAGTTAAACTAGATGAGAGTTTGGCTATAGTTGCCGTGAACA
TGTCTATGCATTCTAGGCCCTATTCGACAACACTCGACTCCTCCAGGACGGA---------GCGGAGCGCCGGATTAGCA
GCTTCCTAAATTACAACTACATGATGCAG---------------------------------------AGGCTCTTAGTC
CTACAAATTCGTCCGTGTCATCAATTGTCGTTGGCTTTTCCTTTTCTTTGCAGGAGCATAAACTCTTGTAAGACGTGCGA
TTCCAGTACACCGGTCGATGCAGAGGCAACATCCATTTCGGTT---------------CGGCATATAGGCCAACGTTGAT
TTTATTTATTTTTATTTTTTACAGTTGCTGTTTCTTCGTCGTTCCACTAATTGTCACCGCTCCATGTCCTGGCTTCACGG
CGGCGGCATTAAATGTTCAACAGAATTTGTCAACCGTTGAGATGTGATCCGACACCCGATACGGGGGGATCGCTCGCCAT
CTATTCGCGCCGCACCAGGGTTTCAGAATGGCATTTTTTTTTTTTGCGAATAGAATAGCATTCAAGACCGATCCGTCCCG
ACGTGATCTCGCCACCAAACCAGATGCAAACCATAG------------------------------GAGAAAACATAAAC
ACCTTCGTCCTGGTCGGACGCAGCGGCCACAGCTCCACTACTTCCTCTCCGGCATCTACTTAAGATCTTCAAAGGTTTTT
CTTGCGATAAGGAACTGCAAAGGTGAGCTTACTTCTTCTGCTTCTGCAAAGGTGAGCTTACTTCTGTTGCGCTTCTCCCT
TCGGCTTTGTTGAATCCAGAACCAGGAGAAACATGACGCTGGATCGTGGGCGCAGCCGTTCCTGAGCCGAGGTGTATCTT
GATGTGCAGAAGATGCCGACGTTGAGCATCACGGTGGACATGGGGTGCAGCCGCTGCAGCGCCAAGATTCAGAGGGTCCT
ATCCTCCATCCAGGACCGAGGCAAGTTTGTCATCGAGAAGATCGTGTACGAGGATAAACGGGTGCTCGTGTCGGGGCCCT
TCGACGCCGACAAGCTGACATGCAAGCTCTGGTGCAAGGCCAGCAACGTCATCAAGAACATTGAGGTCGTCAAGCCGCCG
GTGGTAGCCAAGCCGAAGGACGACCCTCCCAAGCAGAAGAAGCAAGACGAGAAGCCCGAGACCAAGCCAGCCCCGTGCAA
CCAGCTGGTCCCGTACGCGTAC------CCGTACCCGCTGCCGTACCCATCGGCGTGGCCGTGTGGCTGCGGTACGCCGT
GCTGCGAGGGCCACTCCAAGCCGCCCCCT------CCGGCGCCGGCGCCCACGTGCCAGTGCCCGGC-------------
-----------CTACCCGCCGTACCAGCAGCCGATGCCCATGCCGTGCACGCCGATGGTCATCTGCGAGGAGAGCCCGCC
CGCCTGCTCCGTCATGTAACTGCGTGTATGTCCCTGCTCGACGGTGTACACCACCTCTTTGAAGCCTCCATGTATCCAGT
CCATGAGTGATTTGTTTGTAATTCTTCCAATATATTTCCTTAAACGTCTTCGAGCTTAATGCTTTCTGTCGAATAAGTGA
ACGTTGTATATATGTTGCTTAAGGAATCAGGAATCCCCAAGCAGCCTAGAGCAATTTTCACCTTGTTCAAAAATCCTTTA
CTCTTAGGATTTGAAAATACAATGCCCTGTTTTACTTTTATA--AAGTGTAATGCATTTCTTTCACCACTTAAATTACAA
TGCCTACCCAG-----------------------GCCTGAATCTGGGAGCTATTGATCTTCATGGCACTGATTCTGACAT
CCCCGGTGGAGGTGGTTAAGGCGGCCATTGATGCTATTTCACTACAAGAAATATGTTAACTAGTGACCTTCTGTGAGTGA
-CCTGGAAGAATCGGTCATAGATCTATGACCATTTCAAACTAATTGGTCAAAAGCTGTTTGGGGGGCTCCAAACCCTAAA
CTATAACGACCATTTTGATCAGAAATGTCGTAATTTCCTTACACGAAATGGTCATAAAGCAGATCC------------GC
CTTATTTCTAGCTGATCATGACCAATATAGATGGTCATAACCTTGTAAATTGTGGTGGGTTGCTATGACTAGGCGCCACC
TCATCAGTTTTGCCTATGTGTCATGTCCATGTGATAGTTTTTGCCCTAGGTTGTGAAGCAACCTATATTTCTGTCATTCC
CAAAATTCCCAAAAAAATCTCATAAATTGTTTGGGTCATATCTTCGTCAAATATATAAAAAACCTTCCTTGCCTAGTTCA
AAAATAATTCAAAAATATTCATTTTCCTATTCTGTTCAGAAAAACACTTTGTGAAGGAAGTACCACTTTGGCATGTCCAA
ATGGTATCCATTTTCTACGGTGCTTTCCTATGTCCAAATAACCATCCTCCACCAA-ATGCCAGCTCAATCCATTCATTAT
TTTGAGCCCAGCTTCAAC
>chr2A_1
GGCGAGTAGCGGCAGACCACACGCCGCCTGCAACGTGGACTGGTATGTGCCGAGCCACCGCTTCTCCACATGTTCGAATT
GTGGATCTCCATTGCCGAATCGCCCTAGGCCGCACGCCGTGGTACTTCTTCGGCGGCAGCGATGACAGAGACATGGATCT
CGAGCGGGCGGGGGCGGCGGGTACTCGGGTGGTTGCGCCGACCCGTTCCGGACGAAATGCGGATACGGGGTGGCCCTCCT
CATCGACGAGCTCATGGTAGCAGATGTGGCTAGACTCATCGATTCACGTGACGTCAGTAGGCGCTGGTCAATTAAAGTGT
GGCACGAGGATGGCGGGGGCTGCACGGTGGCCGAAGGGGGAAAGGAAAGTGGCGGAAGCAAGAAGGTTGGTGCCTGCGTG
GAGGCAGCCGAGCCAGGGAGAGCGACATCCAAGCCACGGAGGAAATCTTTTTTACTGAGAAGTGGCTTCGGCTGCTCAAA
TTTGAGGCACAACTGATATACCGCATTCTTTTTTTGAGAAGTTAAACTGGATGAGAGTTTGGCTATTGTTGCCATGAACA
TGTCTATGCATGTTAGGCCCTATTTGGCAAAACACCACTCCTCCAGGACGGAGCGGAGTGCGCGGAGCGCCGGGTTAGCA
GCT-CCTAAATTACAATTACATGTCGCTCCGCTCCAGAGCGGAGTTGCAGAGGGGAGGGATTCCAAACAGACTCTCAGTC
CTACAAATTCGTCTGTGTCATCAATCGTCGTTGGCTTTTCCTTTTCTTTGCAGGAGCATAAACTCCTGTAAGACTTGCGA
TTCCAGTACACAGGTCGATGCAGAGGCGACATCCATTTCGGTTAGGTTCTTGTGAGTGCGGCATATAGGCCAGCGTTGAA
TTTTTTTAATTTAG---TTCACAGTTGCTGTTTCTTCGTCATTCCACTAATTGTCACCGCTCCATGTCCTGGCTTCACGG
CGGCGGCATTAAATATTCAACAGAATCTGTTAACCGTTGAGATGTGAT-CGACACCCGATACAGGG--ATCGCTTGCCAT
CTATTCGCACCGCACCAGGGTTTC---------------------------AGAATGGCATTCAAGACCGATCCGTCCCG
ACGTGATCTCGCCACCAAACCAAATGCAAACCGTTG------------------------------GAGAAAACATAAAC
ACCTTCGTCCTGGTCGGACGCAGCGGCCACAGCTCCACTACTTCCTCTCCGGCATCTACTTAAGAACTGCAAAGGTTTTT
CTTCCGACAAAGAATTGCAAAGGTGAGCTTACTTCTTCTTCTTCTGCAAAGGTGAGCTTACTTCTGTAGCCCTTTCCCCT
TCTGCTTTGCTGAATCCAGAACCAAGAGAGACATGACGCTGGATGGTGGGCGCAGCCGTTCCTGAGCCGAGATGTATCTT
GATGTGCAGAAGATGCCGACGTTGTGCATCACGGTGGACATGGGGTGCAGCCGCTGCAGTGCCAAGATCCAGAGGGTCCT
GTCCTCCATCCAGGACCGAGGCAAGTTTGTCATCGAGAAGATCGTGTACGAGGATAACAGGGTGCTCGTGTCGGGGCCCT
TCGACGCCGACAAGCTGACATGCAAGCTCTGGTGCAAGGCCAGCAACGTCATCAAGAACATTGAGGTCGTCAAGCCGCCG
GTGGTAGCCAAGCCGAAGGACGACCCTCCCAAGCCCAAGAAGAAAGAGGACAAGCCCGAGCCCAAGCCAGCCCCGTGCAA
CCAGCTGGTGCCGTACGCGTATCCGCTGCCGTACCCGCTGCCGTACCCATCGGCGTGCCCGTGTGGCTGCGCTACGTCGT
ACTGCGAGTGCCACTCCAAGCCACCTCCTCCGGCACCGGCGCCGGCGCCCACGTGCCAGTGCCCGGCGTGGTCATCTTGC
CACTGCCACACCTACCCGCCGTACCAGCAGCCCATGCCCATGCCGTGCACGCCGATGGTCATCTGCGAGGAGAGCCCGCC
CGCCTGCACCGTCATGTAACTGCGAC--------------ACGGTGTGCACCATCTCTTCGAAGCCTCCATGTATCCATT
CCATGAGTGATTTGTTTGTAATTCTTTCAATATATTTCCTTAAACGTCTTCGAGCTTAATGATTTCTGTCGAATAAGTGA
GCGGTGTATATATGTTGCTTAAGGAATCAGGAATTCCCAAGCAGCCTAGAGCAATTTTCACCTTGTTCAAAGATCCTTTA
CTCTTAGAATTTGGAAATACAATGCCTTGTTTTACTTTTATATAAAGTGTAATGGATTTCTTTCACCACTTAAATTACAA
TGCCTACCTAGGCCGACTGATCTAAATTCGGAGAGCCTGAATCTGGAGACTGTTGATCTTCATGGCATTGATTCTGACAT
CCCCGAGA-AGGAGGTTAAGGCGGCCATTGATGCTAT-------------------------------------------
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>chr2D_661
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------------------------------------------------------------------------TCTTAGTC
CTAC-AATTCGTTTGTGTCATCAATTGTTGTTGGCTCTTCCTTTTCTTTTCAGGAGCATAAACTCTTGTAAGACTTTCGA
TTCCAGTACACCGGTTGATGCAGAGGCGATATCCATTTCGGTTAGGTTCTTGTGGGTGCGGCTTATAGGCTAGCGCTGAT
TTCTGTA--------TTTTTACAGTTGTTGTTTCTTCGTCGTCCCACTAATTGTCACCGCTCCATGTCCTGGCTTCACGG
CGGCGGCATTAAATATTCAACAGAATTTGTTAACCGTTGAGATGTGATCCGACACCCGATACAGGG--ATCGCTCGCCAT
CTATTCGCGCCGCACCAGGGTTTC---------------------------AGAATGGCATTCAAGACCGATCCGTCCCG
ACGTGATCTCGCCACCAAACCAAATGCAAACCATAGGAGAAAACATAAACACCTTTTTTTTTTGGCGAGAAAACATAAAC
ACCTTCGTCCTGGTCGGACGCAGCGGCCACATCTCCGCTACTTCCTCTCCGCCATCTACTTAAGATCTTCAAAGGTTTTT
CTTGCGATAAGGAACTGCAAAGGTGAGCTTACTTCTTCTGCTTCTGCAAAGGTGAGCTTACTTCTGCTGCGCTTCTCCCT
CCGGCTTTGTTGAATCCAGAACCAGGAGAAACATGGCGCTGGATCGTGGGCGCAGCCGTTCCTGAGTCGAGGCGTATCTT
TATGTGCAGAAGATGCCGACGCTGAGCATCACGGTGGACATGGGGTGCAGCCGCTGCAGTGCCAAGATCCAGAGGGTCCT
GTCCTCCATCCAGGACCGAGGCAAGTTTGTCATCGAGAAGATCGTGTACGAAGATAACAGGGTGCTCGTGTCGGGGCCCT
TCGACGCCGACAAGCTGACATGCAAGCTCTGGTGCAAGGCCAGCAACGTCATCAAGAACATTGAGGTCGTCAAGCCGCCG
GTGGTAGCCAAGCCGAAGGACGACCCTCCCAAGCCCAAGAAAAAAGAGGAGAAGCCCGAGACCAAGCCAGCCCCGTGCAA
CCAGCTGGTGCCGTACGCGTAC------CCGTACCCGCTGCCGTACCCATCGGCGTGGCCGTGTGGCTGCGGTACGTCGT
GCTGCGAGGGCCACTCCAAGCCACCTCCT------CCGGCGCCGGCGCCCACGTGCCAGTGCCACTC-------------
-----------CTACCCGCCGTACCAGCAGCCGATGCCCATGCCGTGCACGCCGATGGTCATCTGCGAGGAGAGCCCGCC
CGCCTGCGCCGTCATGTAACTGCGTGTACGTCCCTGCTGGACGGTGTACACCACCTCTTTGAAGCCTCCATGTATCCAGT
CCATGAGTGATTTGTTTGTAATTCTTTCAACATATTTCCTTAAACGTCTTCGAGCTTAATGCTGTCTGTCGAATAAGTGA
GCGTTGTATATATGTTGCTTAAGGAATCAGGAAGTCCCAAGCAGCCTAGAGCAATTTTCACCTTGTTCAAAAATCCTTTA
CTCTTAGAATTTGAAAATACAATGCCTTGTTTTAC--------AAAGTGTAATGCATTTCTTTCACCACTTAAATTACAA
TGCCTACCCAG-----------------------GCC-------------------------------------------
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>chr3A_2266
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-----------------------GCCAATGATGATTTTACACTACAAGAAATATGTCAACTAGTGACCTTCTGTCAGTGA
CCCTGGAAGAATTGGTCATAGATCTATGACCATTTCAGACCAATTGGTCAAAAGCTGTTCGGGGGGCTCCAAACCCTAAA
CTATAACGACCATTTTGATCAGAAAGTTCGTAATTTCCTTACACGAAATGGTCATAAAGCAGATAGCACTGGTCCGCTGC
CTTATTTCTAGTTGATCATGACCAATACAGATGGTCATAACCTTGTAAATTGTGGTGGGTTGCTATGACTAGGCGCCACC
TCATCAGTTTTGCCTATGTGTCATGTCCATGTGGCAGTTTTTGCCCTAGGTTGTCAAGCAACCTATATTTCTGTCATTCC
CAAAATTCCCAAAAA-ATCTCATAAATTCTTTGGGTCATATCTTCATCAAATATGTAAAAATCCTTCCTTGCCTAGTTCA
AAACTAATTCAACAATATTCATTTTCCTATTCTGTTCACAACAGCACTTTATGAAGGAAGT-------------------
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>chr2A_2268
CATTGTGCTTC---------------------------------------------------------------------
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---------------------------------------CACTACAAGAAATATGTCAACTAGTGACCTTCTGTCAGTGA
CCCTGGAAGAATTGGTCATAGATCTATGACCATTTCAGACCAATTGGTCAAAAGCTGTTCGGGGGGCTCCAAACCCTAAA
CTATAACGACCATTTTGCTCAGAAAGGTCGTAATTTCCTTACACGAAATGGTCATAAAGCAGATAGCACTAGTCTGCTGC
CTTATTTATAGCTGATCATGACCAATATAGATGGTCATAACCTTATAAATTGTGGTGGGTTGCTATGACTAGGCGCCACC
TCATCAGTTTTGCCTATGTGTCATGTCCATGTGGCAGTTTTTGCCCTAGGTTCTGAAGCAACCTATATTTCTGTCATTCC
CAAAATTCCCAAAAATATCTCATAAATTATTTGGGTCATATCTTCATCAAATATGTAAAAATCCTTCCTTGCCTAGTTCA
AAACTAATTCAACAATATTCATTTTCCTATTTTGTTCACAATAGCACTTTATGAAGAAAGT-------------------
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>chr2B_2270
TTGATGTA------------------------------------------------------------------------
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--------------------------------------TCACTACAAGAAATATGTCAACTAGTGACCTTCTGTCAGTGA
CCCTGGAAGAATTGGTCATAGATCTATGACCATTTCAGACCAATTGGTCAAAAGCTGTTCGGGGGGCTCCAAACCCTAAA
CTATAACGACCATTTTGGTCAGAAAGGTCGTAATTTCCTTACACGAAATGGTCATAAAGCAGATAGCACTGGTTCGCTGC
CTTATTTCTAGTTGATCATGACCAATATAGATGGTCATAACCTTGTAAATTGTGGTGGGTTGCTATGACTAGGCGCCACC
TCATCAGTTTTGCCTATGTGTCATGTCCATGTGGCAGTTTTTGCCCTAGGTTGTGAAGCAACCTATATTTTTGTCATTCC
CAAAATTCCCAAAAAAATCTCATAAATTCTTTGGGTCATATCTTCGTCAAATATGTAAAAAACCTTCCTTGCCTAGTTCA
AAATAAATTCAAAAATATTCATTTTCCTATTCTGTTCA-AAAAACACTTTGTGAAGGAAGTACCACTTTGGCATGTCCAA
ATGGTATCCATTTTCTATAGCGCTTTCCTATGCCCAAATAACCATCCTCCACCAA-ATGCCAGCTCAATCCATTCATTAT
TTTGAGCCCAACTTCAAC
>chr3A_2273
ATGCTA--------------------------------------------------------------------------
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-------------------------------------TTCACTACAAGAAATATGTCAACTAGTGACCTTCTGTCAGTGA
CCCTGGAAGAATTGGTCATAGATCTATGACCATTTCAGACCAATTGGTCAAAAGCTGTTCGGGGGGCTCCAAACCCTAAA
CTATAACGACCATTTTGGTCAGAAAGGTCGTAATTTCCTTACACGAAATGGTCATAAAGCAGATAGCACGGGTCTGCTGC
CTTATTTCTAGCTGATCATGACCAATATAGATGGTCATAACCTTGTAAATTGTGGTGCGTTGCTATGACTAGGCGCCACC
TCATCAGTTTTGCCTATGTGTCATGTCCATGTGGCAGTTTTTGCCATAGGTTGTGAAGCAACCTATATTTCTGTCATTCC
CAAAATTCCCAAAAAAATCTCATAAATTCTTTGGGTCATATCTTCATCAAATATGTAAAAATCCTTCCTTGCCTAGTTCA
AAACTAATTCAACAATATTCATTTTCCTATTCTGTTCACAACAGCACTTTATGAATGAAGT-------------------
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>chr2D_2279
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------------------------------------TTTCACTACAAGAAATATGTCAACTAGTGACCTTCTGTCAGTGA
CCCTGGAAGAATTGGTCATATATCTATGACCATTTCAGACCAATTGGTCAAAAGCTGTTCGGGGGGCTCTAAACCCTAAA
CTATAACGACCATTTTGGTCAGAAAGATCGTAATTTCCTTACACGAAATGGTCATAAAGCAGATAGCACTGGTTCGGTGC
CTTATTTCTAGCTGATCATGACCAATATAGATGGTCACAACCTTGTAAATTGTGGTGGGTTGCTATGACTAGGCGCCACC
TCATCAGTTTTGCCTATGTGTCATGTCCATGTGGCAGTTTTTGCCCTAGGTTGTGAAGCAACCTATATTTCTGTCATTCC
CAAAATTCCCAAAAAAATCTCATAAATTCTTTGGGTCATATCTTCGTCAAATATATAAAAAACCTTCCTTGCCTAGTTCA
AAAATAATTCAAAAATATTCATTTTCCTATTATGTTCAGAAAAACACTTTGTGAAGGAAGTACCACTTTGGCATGTCCAA
ATGGTATCCATTTTCTACAGTGCTTTCCTATGCCCAAATAACCATCCTCCACCAA-ATGCCGGCTCAATCCATTCATTAT
TTTGAGCCCAGCTTCAAC
>chr5D_2280
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-------------------------------------TTCACTACAAGAAATATGTCAACTAGTGACCTTCTGTCAGTGA
CCCTGGAAGAATTGGTCATAGATCTATGACCATTTGAGACCAATTGGTCAAAAGCTGTTCGGGGGGCTCCAAACCCTAAA
CTATAACGACCATTTTGGTCAGAAAGGTCCTAATTTCCTTACACGAAATAGTCATAAAGCAGATAGCACTGGTCCGCTGC
CTTATTTCTAGCTGATCATGACCAATATAGATGGTCATAACCTTGTAAATTGTGGTGGGTTGCTATGACTAGGCGCCACC
TCATCAGTTTTGCCTATGTGTCATTTCCATGTGGTAGTTTTTGCCCTAGGTTGTGAAGCAACCTATATTTCTGTCATTCC
CAAAATTCCCAAAAAAATCTCATAAATTCTTTGGGTCATATCTTTGTCAAATATGTAAAAAACCTTCCTTCCCTAGTTCA
AAAATAATTCAAAAATATTCATTTTCCTATTCTGTTCAGAAAAACACTTTGTGAAGGAAGTACCACTTTGGCATGTCCAA
ATGGTATCCATTTTCTACAGTGCTTTCCTATGCCCAAATAACCATTCTCCACCAA-ATGCCAGCTCAATCCATTCATTAT
TTTGAGCCCAGCTTCAAC
>chr1D_2281
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--------------------------------------TCACTACAAGAAATATGTCAACTAGTGACCTTCTGTCAGTGA
CCCTGGAAGAATTGGTCATAGATCTATGACCATTTCAGACCAATTGGTCAAAAGCTGTTCGGGGGGCTCTAAACCCTAAA
CTATAACGACCATTTTGGTTAGAAAGGTCGTAATTTCCTTACACGAAATGGTCATAAAGCAGATAGCACTGGTTCGCTGC
CTTATTTCTAGCTGATCATGACCAATATAGATGGTCATAACCTTGTAAATTGTGGTGGGTTGCTATGACTAGGCGCCACC
TCATCAGTTTTGCCTATGTGTCATGTCCATGTGGCAGTTTTTGCCCTAGGTTGTGAAGCAACCTATATTTCTGTCATTCC
CAAAATTCCCAAAAAAT-CTCATAAATT-TTTGGGTCATATCTTCGTCAAATATATAAAAAACCTTCCTTGCCTAGTTCA
AAAATAATTCAAAAATATTCATTTTCCTATTCTGTTCAGAAAAACACTTTGTGAAGGAAGTACCACTTTGGCATGTCCAA
ATGGTATCCATTTTCTACAGTGCTTTCCTATGCCCAAATAACCATCCTCCACCAA-ATGCCAGCTCAATCCATTCATTAT
TTTGAGCCCAGCTTCAAC
>chr4D_2282
--------------------------------------------------------------------------------
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---------------------------------------CACTACAAGAAATATGTCAACTAGTGACCTTCTGTCAGTGA
CCCTGGAAGAATTGGTCATAGATCTATGACCATTTCAGACCAATTGGTCAAAAGCTGTTTGGGGGGCTCCAAACCCTAAA
CTATAACGACCATTTTGGTCAGAAAGGTCATAATTTCCTTACACGAAATGGTCATAAAGCAGATAGCACTGGTCCGCTGC
CTTATTTCTAGCTGATCATGACCAATATAGATGGTCATAACCTTGTAAATTGTGGTGGGTTGCTATGACTAGGCGCCACC
TCATCAGTTTTGCCTATGTGTCATGTCCATGTGGCAGTTTTTGCCCTAGGTTGTGAAGCAACCTATATTTCTGTCATTCC
CAAAATTCCCAAAAAAAACTCATAAACTCTTTGGGTCATATCTTCGTCAAATATGTAAAAAACCTTCCTTGCCTAGTTCA
AAAATAATTCAAAAATATTCATTTTCCTATTCTGTTCAGAAAAACACTTTGTGAAGGAAGTACCACTTTGGCATGTCCAA
ATAGTATCCATTTTCTACAGTGCTTTCCTATGGCCAAATAACCATCCTCCACCAA-ATGCCAGCTCAATCCATTCATTAT
TTTGAGCCCAGCTTCAAC
>chr4D_2282
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---------------------------------------CACTACAAGAAATATGTCTACTAGTGACCTTCCGTCAGTGA
CCCTAGAAGAATTGGTCATAGATCTATGACCATTTCAGACCAATTGGTCAAAAGCTGTTCGGGGGGCTCTAAACCCTAAA
CTATAACGACCATTTTGGTCAGAAAGGTCGTAATTTCCTTACACGAAATGGTCATAAAGCAGATAGCACTGGTTCGCTGC
CTTATTTCTAGCTGATCATGACCAATATAGATGGTCATAACCTTGTAAATTGTGGTGGGTTGCTATGACTAGGCGCCACC
TCATCAGTTTTGCCTATGTGTCATGTCCATGTGGCAGTTTTTGCCCTAGGTTGTGAAGCAACCTATATTTCTGTCATTCC
CAAAATTCCCAAAAAAA-CTCATAAATTCTTTGGGTCATATCTTCGTCAAATATATAAAAAACCTTCCTTGCCTAGTTCA
AAAATAATTCAAAAATATTCATTTTCCTATTCTGTTCAGAAAAACACTTTGTGAAGGAAGTACCACTTTGGCATGTCCAA
ATGGTGTCCATTTTCTACAGTGCTTTCGTATGCCCAAATAACCATCCTCCACCAAAATGCCAGCTCAATCCATTCATTAT
TTTGAGCCCAGCTTCAAC
>chr4A_2282
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---------------------------------------CACTACAAGAAATATGTCAACTAGTGACCTTGTGTCAGTGA
GCCTGGAAGAATTGGTCATAGATCTATGACCATTTCAGACCAATTGGTCAAAAGCTGTTCGGGGGGCTCCAAACCCTAAA
CAATAACGACCATTTTGGTCAGAAAGGTTGCAATTTCCTTACACGAAATGGTCATAAAG-------------TCCGCTGC
CTTATTTCTAGCTGATCATGACCAATATAGATGGTCATAACCTTGTAAATTGTGGTGGCTTGCTATGCCTAGGCGCCACC
TCATCAGTTTTGCCTATGTGTCATGTCCATGTGGCAGTTTTTGCCCTAGGTTGTGAAGCAACCTATATTTCTATCATTCC
CAAAATTCCCAAAAAAATCTCATAAATTCTTTGGGTCATATCTTCGTCAAATATGTAAAAAACCTTCCTTGCGTAGTTCA
AAAATAATTCAAAAATATTCATTTACCTATTCTGTTCAGAAAAACACTTTGTGAAGGAAGTACCACTTTGGCATGTCCAA
ATGGTATCCATTTTCTACAGTGCTTTCCTCTACCCAAATAACCATCCTCCACCAA-ATGCCAGCTCAATCCATTCATTAT
TTTGAGCCCGGCTTCAAC
>chr6D_2282
--------------------------------------------------------------------------------
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---------------------------------------CACTACAAGAAATATGTCAACTAGTGACCTTCTGTCAGTGA
-CCCTGGAGAATTGGTCATAGATCTATGACAATTTCAGACCAATTGGTCAGAAGTTGTTCGGGGGGCTCCAAACCCTAAA
CTATAACGACTATTTTGGTCAGAAAGGTCGTAATTTCCTTACACGAAATGGTCATAAAGCAGATAGCACAGGTCCGCTGC
CTTATTTCTAGCTGATCATGACCAATATAGATGGTCACAACCTTGTAAATTGTGGTGGGTTGCTATGACTAGGCGCCACC
TCATCAGTTTTGCCTATGTGTCATGTCCATGTGGCAGTTTTTGCCCTAGGTTGTGAAGCAACCTATATTTCTGTCATTCC
CAAAATTCCCAAAAAAATCTCATAAATTCTTTGGGTCATATCTTCGTCAAATATGTAAAAAACCTTCCTTGCCTAGTTCA
AAAATAATTCAAAAATATTCATTTTCCTATTCTGTTCAGAAAAACACTTTGTGAAGGAAGTACCACTTTGGCATGTCCAA
ATGGTATCCATTTTCTACAGTGCTTTCCTATGCCCAAATAACCATCCTCCACCAAA-TTCCAGCTCAACCCATTCATTAT
TTTGAGCCCAGCTTCAAC
>chr3D_2282
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---------------------------------------CACTACAAGAAATGTGTCAACTAGTGACCTTCTGTCAGTGA
TGCTGGAAGAATTGGTCATAGATCTATGACCATTTCAGACCAATTGGTCAAAAGCTGTTCCGGGGGCTCCAAACCCTAAA
CTATAACAACCATTTTGGTCAGAAAGGTCGTAATTTCCTTACATGAAATGGTCATAAAGA-------ACTGGTCCGCTGC
CTTATTTCTAGCTGATCACGACCAATATAGATGGTCATAACCTTGTAAATTGTGGTGGGTTGCTATGACTAGGCGCCACC
TCATCAGTTTTGCCTATGTGCCATGTCCATGTGGCATTTTTTGCCCCAGGTTGTGAAGCAACCTATATTTCTGTCATTCC
CAAAATTCCCAAAAAAATCTCATAAATTTTTTGGGTCATATCTTCGTCAAATATGTAAAAAACCTTCCCTGCCTAGTTCA
AAAATAATTCAACAATATTCATTTTCCTATTCTATTCAGAACAACACTTTGTGAAGGAAGTACCACTTTGGCATGTCGAA
ATAGTATCCATTTTCTACAGTGCTTTCCTATGCCCAAATAACCATCCTCCACCAAA-TGCCAGCACAATCCATTCATTAT
TTTGAGCCCAGCTTCAAC
>chr3A_2282
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---------------------------------------CACTACAAGAAATATGTCAACTTATGACCTTCTGCCAGTGA
CCCTCGAAGAATTGGTCATAAATTTATGACCATTTTAGACCAATTGGTCAAAAGCTGTCTGGGGGGCTCTAAACCGTAAA
CCATAACGACCATTTTGGTCAGAAAGGTCATAATTTCATTAGAGGAAATGGTCATAAAGCAAACAGC------CCGCTGC
CTTATTTCTAGTTGTTAACGACCAATATAGATGGTCATAGCCTTGTAAATTGTGGTGGGTTGCTATGTCTAGGCGCCACC
TCATCAGTTTTGCCTATGTGTCATGTCCATGTGGCAGTTTTTGCCCTAGGTTGTGAAGCAACCTATATTTCTGTCATTCC
CCAAATTCCCCAAAAAATCACATAAATTCTTTGGGTCATATCTTTGTCAAATATGTAAAA-ACCTTCCTTGCCTAGTTAA
AAAATAATTCAACAATATTCATTTTCCTATTCTGTTCACAACAACAGTTTGTGAAGGAAGTACCACTTTGACATGTCCAA
ATAGTATCCATTTTCTACAGTGCTTTCCTATGCCCAAATAACCATCCTCCACCAAAG-GCCAGCTCAATCCATTCATAAT
TTTGAGCCGAGCTTCAAC
>SNPs
-----------S--S-------------------S--------------SS----------------S------------
----------SS----------------------S--------------S-S--S-----------S-------------
--------S--S--------------------S-----------S----------------S------------------
----S------------------SSS--S-----S------------S---S---S-------S--------S-------
-SSS------------------------------S--------------S------S-------S---------------
------S------S--------S--------------SS---S----------S------------------S-------
--------S----S-----S----S------S----------------S-----------------S------S------
-----------SS-----------S-S---S--S-S-------------------------------------S------
---S------------S------SS--SS-----------------------------------------S---------
-------------S------------------------------------------------------------S-----
---------------------------S--------------------------------------------S-------
---S----S---SSS-----------------------------------------------------------------
--------------S---------------S-------------------------------S---SS------------
------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSS-----S-----------------------
----------------------S---------------------------------------------------------
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-----------------------------------------------------------S--------S-----------
S--------------------------------------------------------SS---------------------
--------------------------------------------------------------------------------
----------------------------------SS------S----S--------------------------------
---------S------------------------------------------------------------------S---
----------------------S--S------------------------------------------------------
--------------------------------------------------------------------------------
-------S--------------------S---------S-----------------------------------------
--------------------------S-----------------------------------------------------
S---------------------------------S---------------------------------------------
-------S------------------S-----------------------------------------------------
----------------------------------------------SSS--S---------------S------------
-----SSSS---S-------------------------------------------S-----------------S-----
------------S------------------------S--S---------------------------------------
-------------------------S--------------------------------------SS--------------
--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
----------------------------S---------------------------------------------------
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------------------S-------------S-----------------------------------------------
------------------
>forward_1023
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-------------------------------------------GTGATCCGACACCCGATACG-----------------
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>reverse_2413
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------------TGGTTAAGGCGGCCATTGAT------------------------------------------------
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------------------
