>input_sequence_66207
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------ATGTATGAACACCAAGAATACGTCTCGGTATTTCTTGAGCTACTGACGTT
GGAGGCCGACGTAAGGGCGGGCTTCGACATGAGTCTGGTCGTCCCGTCGGACCCGGCCACCACCAAGTTGATCCATCGGG
TGGCTCCGATGTTTTTCGGCCACATACAACCCGACTGGGGGCTTCCCAAGTTCATGAAGAGGGCAGTCTTGGAATCATCA
CCGTACCTGGAGGATGACCGCCTCGTGATCAAGTGCGAGGTCACTGTCGTCAGGCAACCACAGGTGGAGGAGACCTCGCC
GGACTTCGAGGTCCAGGTGCCGCCGTCTGATCTGTACGACAATCTTGGGAAACTCTTAGAATCAGGGGAGGAAGCAGATG
TAATTTT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------CAAG
GTTAAAAGGGAGTCTTTT---------------------------------TCTGCCCACAAGATTGTGCTTGCAATGCG
GTCGCCGGTGTTCAAGGTGGAGCTTTATGGGCCGATGAGCGACAAAAG-AACAGGGAGGATAACCGTCAAGGATATGCAG
CCTGCTGTATTCAAGGCGTTGCTTCAGTTTATCTACACTGATTCGTTGCCTTCCATGCTTGACCTCTGCGACAATGACCA
GAAAGAAATGGTCAAGCATTTGCTTGTGGCTGCAGATAAGTATGCCATGGAAAGACTGAAGCTAATCTGCGAAGGCATTC
TTTGCAGGAGTCTCGACGTTGATTCTGTGGCGACGACATTAGCTCTGGCTGACCAGCATCATTGCGGCAATCTCAAAAAT
GCTTGTGTCCAATTTATCCTCACGGCGAATAGAATGGATGCTGTGCTGGCAAGCAAAGGCTACACACACCTTAAACGATC
TTGTCCTTCTGTCATAGTTGATATCTTTGAGAGGGCAACTAAGTCTCGCAAGATTCTGTAA-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>chr3D_1_TraesCS3D01G352200
ATTTAAATATTGTTTGTACCATCGCAAAATGTATGTGACATTTTATGGAAAATATTCCGGCGTTTCAAGAAAAATGTTCA
CGACATTTTATAGAAAATAATCAACTGTTTCCAATAAATATTGTAAAAAATTAATACAATGTAAATTTCTTTGTGTAGTT
TAATTTTA--TTTATTTCCATTAAAAAATTACAACGTGTCTTTGGAACATGTTAACATGTATTCGAAGAAGTATTCAAAA
CATGTATTT-AAAAATGTGCGTCATGCATTGAAAACTATCGAATG-------------TGTTTCACATGTGCTCTAGAAA
TATATTTGTGTACTGAAAAAAAATATGGACATGTGTTAAAAAATGAAAACCGATAAAAAACAACAAAGGAAAGCAAAAAG
AATCAAAGAAAACGAAGAAAACTCCAAAAAGATATCG-AAGTATAAGGAGTAAAGAAAGTAAATCCGAAAAACCAATAAA
GAAAC-----AAACCAGAGCAAAATGAAGA-AAACAAATCCGAGAAAATCGGCGAAAAAAGAAAGA--------------
----------------AAAAAACCCCAAAGAAAACCTGAGTAGAGCAAACCTACAGCGTGTAGCGAGCAACCGTGGTAAT
GGGCCGTCCGTTAGTCATAGCCCGTAGGCGACTAGGAATCAGTACGGGATTCCTTAAACAGAAAGGATCGACGAGCGACA
TATAAGGCCACGGCCCAC-GGGTGAAAAAGGGTGCCGCGTTAGGATTTCAACTTTTGTGAAGATCG----AGCCCTACCT
CGTCTT--CAATCGG-AAATCCCTCTTCGCCGCGCCGCCGC---------CCTAAATTCCACCACGCAAACACCGGCAAT
GGCATCGTCGCAGAGGGCAATTACCACGACTTCATCGAGGTCCAGCCTAGGGACCGCACGGGGAGGGCACGCGTTCGAGA
TATCTGGGTACAGCCAGCACAAGGGCCTTGGCATAGGCGAATCCGTCCGCTCCGCCACCTTCACTGTCGGCAGCTGCGAG
TGGTCCATCGTCTTCTACCCCGACGGAGAAATGTATGAACACCAAGAATACGTCTCGGTATTTCTTGAGCTACTGACGTT
GGAGGCCGACGTAAGGGCGGGCTTCGACATGAGTCTGGTCGTCCCGTCGGACCCGGCCACCACCAAGTTGATCCATCGGG
TGGCTCCGATGTTTTTCGGCCACATACAACCCGACTGGGGGCTTCCCAAGTTCATGAAGAGGGCAGTCTTGGAATCATCA
CCGTACCTGGAGGATGACCGCCTCGTGATCAAGTGCGAGGTCACTGTCGTCAGGCAACCACAGGTGGAGGAGACCTCGCC
GGACTTCGAGGTCCAGGTGCCGCCGTCTGATCTGTACGACAATCTTGGGAAACTCTTAGAATCAGGGGAGGAAGCAGATG
TAATTTT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------CAAG
GTTAAAAGGGAGTCTTTT---------------------------------TCTGCCCACAAGATTGTGCTTGCAATGCG
GTCGCCGGTGTTCAAGGTGGAGCTTTATGGGCCGATGAGCGACAAAAG-AACAGGGAGGATAACCGTCAAGGATATGCAG
CCTGCTGTATTCAAGGCGTTGCTTCAGTTTATCTACACTGATTCGTTGCCTTCCATGCTTGACCTCTGCGACAATGACCA
GAAAGAAATGGTCAAGCATTTGCTTGTGGCTGCAGATAAGTATGCCATGGAAAGACTGAAGCTAATCTGCGAAGGCATTC
TTTGCAGGAGTCTCGACGTTGATTCTGTGGCGACGACATTAGCTCTGGCTGACCAGCATCATTGCGGCAATCTCAAAAAT
GCTTGTGTCCAATTTATCCTCACGGCGAATAGAATGGATGCTGTGCTGGCAAGCAAAGGCTACACACACCTTAAACGATC
TTGTCCTTCTGTCATAGTTGATATCTTTGAGAGGGCAACTAAGTCTCGCAAGATTCTGTAAGCTC---------------
---------------------------------------------ATGTTGGGTTATCTGGATGTAGTTATCTTACATAT
--GACTTGGTAGTACGTAGCCACCTGAAACCAACTCTCCTTATCCTCTG-------------------------------
----------GTTATCGGAGATCTTTTGGA-------------------AACTCG-TGTCTTGGATGTAATGATGAATCA
CCTTATATGTATTCCTGGTTTATAGCTTTTGCGAACTCTATGCTATATGCATAGATCACCTGTTTCTCTAAGATTGATCT
GGGCTAACAATACATTAGGTTTTACAAT----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------TTTG
ATCATAATTGTTCATTCCCTTTCGCAAAGCAGTTAATAATTACTTCTTTTTGTTGTGGAAGCGTGGAGCATTAGGAAATA
GAACATCAATAATGCTTTGATTGCCTAAATTATGTTGGGATTATTAACCATAAAAGT-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---TATGCCATGCACAAGAAGGTTGTTGCTTTATCTATAAAGCGGGGCGAAAGCCTGTCTCGAGAGGTATATATACTTTC
ATATTTTTTGTTCATTACCATCTTTATTTATTTATAAGATCATGAACCGTATATAACTTGCATAAACAAGCAATTTGTCT
TACACCCCAAGTGACGAGGACATCAATACTACAGTTACACTCACGATCCCTGCAGCTACATATATACTGGACTAATTATT
AGAGCTCGCGCACGCCAATTAAATTATCAGGTACTTTCGTTTCTTTATTATGAATCTAATGTTCATGAAAATATGAAAAT
ATGATACTGCCTAAATCTGATACATTTGTTTCGCTTACAAGTGAAGGGCCTAGCTTGAACAGGAAGGATGAACATTGGAG
CAAGATCAAACATGTAGATGATAGCATGCGCCCTTAGGAGA------------ATGGAGTTTCAAGTGATGATTTCAGGG
CTTTGAAGCCACCATAATGAGTGTATGAAGGCTTGGACGAAATAT-CAAGATGCTACTTCATAAATTTTGCCCAGAAGCT
ATTATAGGTGTTGCGTCACCTTATTATTGGGCCAGACCCATGTAATTTAGAAATACTTCAGTATAGGCTGT
>chr3A_13
------------TTTGTACCGTCAAAAAATGTATGTGACATTTTATGGAAAATATTCCCACATTTCAA-AAAAATGTTCG
TGACATTTGATAGAAAATAATCAAGTGTTTCCAATAAATATTGTTAAAAATTAATACAATGTAAATTTCTTTGTGTAGTT
TAAAAGAATGTTTATTTCCATTAAAAAAGTACAACGTGTCTTTGGAAAATGTTAACGTGTATTCGAAGAAGTATTCAAAA
CATCTATTTAAAAAATGTGCACCATGCAATGAAGAATATCCAATGTGTATGAGAAAATTGTTTCACATGTGCTCTAGAAA
TATATTAGTGCACTG-AAAAAAATATAGACATGTGTTAAAAAA-GAAAACCGATAAAAA-CAACAAAGGAAAGCGAAAAT
AATCAAAGAAAACGAAGAAAACCCCCCAAAAAAAATCAAAGTATAACGAGTAAAGAAAGTAAATCCAAAAAACCAATGAG
AAAACAAAGAAAACCAGAGTAAAATGAAGAGAAAAAAACCCAAGAAAATCGGTGAAAACAAATAAAATCCAAGAAAAAAA
TAAAAAAACGAAAAAGAAAAAACCCCAAGGAAAACCTGAGCAGAGCAAACCTACAGCGTGTAGCGAGCAACCGCGTTAAT
TGGCCGTCAGTTAGACATAGCCCGTAGGCGACTTGGAATCGGTATGGGATTCCTTAAGCAGAAAGAATCGACGAGCGACA
TATAACCCTGCGTGGCCATGGGTGAAAAAGGGTGCCGCGTTAGGATTTCAACTTTTGTCAAGGTCGAGCTAGCCCTACCT
CATCTT--CAATCGGAAAATCCCTCTTCGCCGCGCCGCCGC------TGCCCTAAATTCCACCACGCAAATACCGGCAAT
GGCATCGTCGCAGAGGGCAATCACCACGACTTCATCGAGGTCCAGCCTAGGGTCCGCGCGGGGAGGGCACGCGTTCGAGA
TATCTGGGTACAGCCAGCACAAGGGCCTTGGCA-AGGGGAATCCGTCCGCTCCGCCACCTTCACTGTCGACGGCTGCGAG
TGGTCCATCGTCTTCTACCCCGACGGAGAAATGCATGAATACCAAGAATACGTCTCGGTGTTTCTTGAGCTACTGACGTT
GGAGGCCGACGTAAGAGCCGACTTCGACATGATTCTGGTCGTCCCGTCGGACCGGGCCACCACCAAGTTGATCCATCGGG
TGGCTCCCATGGTTTTCGGCCACATACAACCCGACTGGGGGCTTCCCCAGTTCATGAAGAGGGCAGTCTTGGAATCATCA
CCGTACCTGGAGGACGACCGCCTCGTGATCAAGTGCGAGGTCACTGTCGTCAGGCAACCACAGGTGGAGGAGACCGCGCC
GGACTTCGAGGTCCAGGTGCCGCCCTCTGATCTGTACGACAATCTTGGGAAACTGTTACAATCAGGGGAGGAAGCCGTGT
GGTTTTGTGTAGCTTGAGCTACGTGGTACCCCTTATCTTAGCCATCCATTTTTGCATCATGATCCGTGCAGGCACATTTG
TCATTTTTGTTTCTCTCAAACGAAACAACGTATAAACTTCAGACTTTGCAAGACAACAAAACATTCTAATTACTATGTGC
GAAAAAACTTTCAGATTTTTTCATGCATTTAAGTGCAAAAATTATTATTTTTAATCAAAAAATCCTCGTTTTGTATATTT
ATGTCGGTCCAAAAAATCTGAAAGTTTTTTCACACATTGAAGTTCTAAATTTGGTTTGATCTGCAAAGTTTGAAGCCCAT
ATGTTCTTTCATTTGAGAGAAACAAAAAAGAGAAATCTTCTTGCTGTAAGTTAGTTGACGAGTACGGATCTCAAAGCAAT
GTTGGAGGGCTGGAGATAAGAGGTTCCGTGTAGCTTGACCTACAGAGAAACTTTACCCACAAGATTGTGCTTGCAATGCG
GTCGCCGGTGTTCAAGGCGGAGCTTTATGGGCCGATGAGCGACAAAAG-AACACGGAGGATAACCGTCAAGGATATGCAG
CCTGCTGTATTCAAGGCGTTGCTTCAGTTTATCTACACTTATTCCTTGCCTTCCATGCTTGACCTCTGCGACAATGACCA
GAAAGAAATGGTCAAGCATTTGCTTGTGGCTGCAGATAAGTATGCCATGGAAAGACTGAAGCTAATCTGCGAAGGCATTC
TTTGTAGGAATCTCGACGTTGATTCTATGGCGACGACATTAGCTCTGGCTGACCAGCATCATTGCGGCAACCTCAAAGAA
GCTTGTGTCCAATTTCTCCTCACGGGGAGTAGAATGGATGCTGTGCTGGCAAGCAAAGGCTACACACACCTTAAAAGATC
TTGTCCTTCTGTCATAGTTGATATCTTTGAGAGGGCAACTAAGTCTCGCAAGATTTTGTAAGTTC---------------
---------------------------------------------ATGTTGGGTTATCTGGATGTAGTTATCTTACATAT
ATGACTTGGTAGTATGTAGCCACCTGAAACCAACTCTCCTTATCCTCT--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>chr3B_719
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------TTTTCTGAACGTCG----AGCCCTGCCT
CGTCTTTTCAATCGG-AAATTCCTCTTCGCCGCGCCGCCGCCGCCGCTGCCCTAAATTCCACCACGCAAACACCGGCAAT
GGCATCGTCGCAGAGGACAATCACCATGACTTCATCGAGGTCCAGCCTAGGGACCGCACGAGGAGGGCACGCGTTCGAGA
TATCTTGGTACAGCTAGCACAAGGGCCTTGGCATAGGCGAATCTGTCCGCTCCGCCACCTTCACTGTCGGTGGCTGCGAG
TGGTCCATCGTCTTCTACCCCGACGGAGAACTGTATGAACACCAAGAATACGTCTCGGTCTTTCTTGAGCTACTGACGTT
GGAGACCGACGTAAGGGCGGGCTTCGACATGAGTCTGGTCGTCCCGTCGGACCCGGCCACCACCAGGTTGATCCATCGGG
TGGCTCCCATGCTTTTCGGCCACATACAACCCGACTGGGGGCTTCCCAAGTTCATGAAGAGGGCAGTCTTGGAATCATCA
CCGTACCTGGAGGATGACCGCCTCGTGATCAAGTGCGAGGTCACCATCGTCAGGCAACCGCAGGTGGAGGAGACCGCGCC
GGACTTCCAGGTCCAGGTGCCGCCCTCTGATCTGTACGACAA-CTTGGGAAACTCTTAGAATCAGGGGAGGAAGCAGATG
TAATTTT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------CAAG
GTTAAAAGGGAGTCTTTT---------------------------------TTTGCCCACAAGATTGTGCTTGCAATGCG
GTCACCGGTATTCAAGGCGGAGCTTTATGGGCCGATGAGCGACAAAAG-AACAGGGAGGATAACCGTCAAGGATATGCAG
CCTGGTGTCTTCAAGGCGTTGCTTAAGTTTATCTACACTGATTCATTGCCTTCCATGCTTGACCTCTGCGACAGTGACCA
GAAAGAAATGGTCAAGCATTTGCTTGTGGCTGCAGATAAGTATGCCATGGAAAGACTGAAGCTAATCTGCGAAGGCATTC
TTTGCAGGAGTCCCGACGTTGATTCTGTGGCGATGACATTAGTTCTGGCTGACCAGCATCATTGCAGCAACCTTAAAGAT
GCTTGCGTTCAATTTATGCTCACGGCTAATAGAATGGATGTTGTGCTGGCAAGCAAAGGCTACACACACCTTAAAAGGTC
TTGTCCTCCTGTCATAGTTGATATCTTTGAGAGGGCAACTAAGTCTCGCAAGATTTTGTAAGCTC---------------
---------------------------------------------ATGTTGGGTTATCAGGATGTAGTTATCTTACATAT
--GACTTGGTAGTATGTAGCCACCTGAAACCAACTCTCCTTATCCTCTG-------------------------------
----------GTTATCGGAGATCTTTTGGA-------------------AACTCTATGTCTTGGATGTAATGATGAATCA
CCTTATATGTATTCCTGTTTTATAGCTTTTGCAAACTGTATGCTATATGCATAGATCACCTGTTTCTCTAAGATTGATCT
GGGCTAACAATACATTAGGTTCTACAAT----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------TTTG
ATCATAGTTGTTCATTCCCTTTCGCAAAGAAGTTAATAATTACTTCTTTTTGTTGTGGAAGCATGGAGCATTAGGAAATA
GAACATCAATAATGCTTTGATTGCCTAAATGATGTTGGGATTATTAACCATAAAAGT-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---TATGCCATGCACAAGAAGGTTGTTGCTTTATCTGTAAAGCGGGGCGAAAGCCTGTCTCGAGAGGTTTATATACTTTC
GTCTTTTTTGTTCATTATCATCTA-ATTTATTTATAAGATCATGAACAGTATATAACTTGAGTATACAAGCAATTTGTCT
TACACCCCAAGTGATGAGGATATCAGTACTACAGTTACACCCACAATCCCTGCAGCTACATATATACTGGACTAATTACT
AGAGCTCGCGCACGCCAATTAAATTATCAGGTACTTTCGTTTCTTGGTAATGATTCTAGTGTTCATAAG--------AAT
ATGATGCTGCCTAAATCGGATACATTTATTTTGCTTACAAATGAAGGGCCTAGCTTGGACAAGAAGGATGAACATTGGAG
CAAGATCAAACATGATGATGATAGCATGCGC---------AAAGGGAAGAAGGATGGAGTTTCAAGTGATGATTTCAGGG
ATTTGAAGCCACCATAATGGC---ATGAAGGCTTAAACGAAATATACAAGATGCTACTTCATAAATCTTGTCCAGAGGCT
ATTATAGGTGCTGCGTCACTTTATTATTGGGCCAGGCCCATGTAATTTTGAAATACTTCAGTATAGGCTGT
>chr5B_1296
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----TCGAGGTCCACGTCCCGCCGTCCCGCCTTTTGGATAATCTTGCAAAATTACTAGAGGGCAAGAAAGGAGCAGACG
CGACTTT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------CAAG
GTGCAAGGGGAGGTTTTT---------------------------------TCTGCTCATAAGGTTTTGCTTGCGACGCA
ATCAGCAGTCTTCGACGCGGAGTTCTACGGGCCGATGGGGGACAAAAGGGGCGCAAGACATAACTATTGATGACATGCAG
CCTGCTGTTTTCAAGTCATTTCTTCACTTCATCTACACGGATTCAATGCCTTCCATGGACGAGCTCGAGGATGATGACAA
AAGAGAAATGGTTAAGCACTTACTTGTGGCTGCAGATAAGTATGCCATGGAAAGGATGAAGATGATATGTGAAGGCATGC
TATGCAAGAGTCTTGATGTTGAGAATGTGGCGACCATATTAGCTCTAGCTGACCAGCACAATTGCAGCAATCTCAAAGAT
GCTTGCATTGAATTTATGCTCTCTTCGAATAGAATGAATGATGTGATCGCAAGCCAAGGGTATGTACAACTCAAGAGATC
TTCGCCTGATATCATTGTAGATGTGTTGGAGAGAGCAGCTAAGTCCCGCAAAATT-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>chr5A_1296
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----TCGAGATCCATGTGCCACCCTCTGACCTTTCGGATAATCTTGCAAAATTGCTAGAGCG---GAAAGGAGCAGACG
TGACTTT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------CAAC
GTTCAAGGGGA-GTTTTT---------------------------------TCTGCTCATAAGATTTTGCTTGCGACACG
GTCGGCGGTCTTCGACGCGGAGTACTACGGGCCGATGGGGGGCAAAGG-GGCACAGGACATAACTATTGACGACATGCAG
CCTGCTGTTTTCAAGTCATTTCTTCACTTCATTTACACGGATTCAATGCCTTCCATGGACGATCTTGAGGATGATGACAA
AAGAGAAATGGTTAAGCACTTACTTGTGGCTGCAGATAAGTATGCCATGGAAAGGATGAAGATGGTATGTGAACGCATGC
TATGCAAGAGTCTTGATGTTGAGAATGTGGCGACCATATTAGCTCTGGCTGACTAGCATAATTGCAGAAATCTCAAAGAT
GCTTGCATTGAATTTATGCTCTCTTCGAATAGAATGAATGATGTGATCGCAAGTCAAGGGTATGTACAGCTCAAAAGATC
TTCGCCTGATATCATTGTAGATGTGTTGGAGAGGGCAGCCAAGTCCCGCAAAATT-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>chr5A_1296
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----TCGAGGCCCATGTTCCGCCGTCCCATCTTTTGGATAATCTTGCAAAATTACTAGATGGGAAGAAAGGAGCAGACG
TGACTTT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------CAAG
GTGCAGGGGGAGGTTTTT---------------------------------TCTGCTCATAAGGTTTTGCTTGCGACGCA
ATCAGCGGTCTTCGACGCCGAGTTCTACGGGCCGATGGGGGACAAAGG-GGCGCAGGACATAACTATTGATGACATGCAG
CCTGCTGTTTTCAAGTCATTTCTTCACTTCATCTACACGGATTCAATGCCTTCCATGGACGATCTCGAGGATGATGACAA
AAGAGAAATGGTTAAGCACTTACTTGTGGCTGCAGATAAGTATGCCATGGAAAGGATGAAGCTGATATGTGAAGGCATGC
TATGCAAGAGTCTTGATGTTGAGAATGTGGCAACCATCTTAGCTCTAGCTGACCAGCACAATTGCAGCAATCTCAAAGAT
GCTTGCATCGAATTTATGTTCTCTTTGAATAGAATGAATGATGTGATTGCAAGCCAAGGGTATGTACAACTCAAAAGATC
TTCGCCTGATATCATTGTGGATGTGTTGGAGAGAGCAGCCATGTCCCGCAAAATT-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>chr5B_1302
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------TCCATGTGCCGCCCTCTGATCTTTCAGGTAATCTTGCAACCTTGCTAGAGGCGAAGATAGGAGCAGACG
TGACTTT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------CAAG
GTGCAGGGGGAGGTTTTT---------------------------------TCTGCTCACAAGGTTTTGCTTGCGGTGCG
ATCGGCGGTCTTCAATGCAGAGTTCTACGGGCCGATGGGTGACAAAGG-GGCGCATGACATAACTATTGACGACATGCAG
CCTGGTGTTTTCAAGGCATTTCTTCACTTCATGTACACGGATTCAATGCCTCCCATGGACAATCTTGAGGATGATGACAA
AAGAGAAATGGTTAAACACTTACTCGTGCCTGCCGACAGGTATGCCATGGAAAGGATGAAAATGATATGTGAAGGCATGC
TATGCAAGAGTCTTGATGTTGAGACTGTAGCGACCATATTAGCTCTGGCTGACCAGCATCATTGCAGTAAGCTCAAAGAT
GCTTGCATTGAATTTATGCTCTCTTCAAATAGAATGAATGATGTGATCGCAAGCCAAGGTTATCTACACCTCAAAATATC
TTCTCCTGATGTCATCATGGATGTGTTGGAGAGAGCAGCTAAGGCCCGCAAGATT-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>chr5B_1354
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------AGGG---GAAAGGAGCAGACG
TGACATT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------CAAG
GTTCAAGGGGAGTTTTTT---------------------------------TCTGCTCACAAGATTTTGCTTGCGACACG
GTCGGCGGTCTTCGACGCGGAGTACTACGGGCCGATGGGGGGCAAAGG-GGCACAGGACATAACTATTGACGACATGCAG
CCTGCTGTTTTCAAGTCATTTCTTCACTTCATCTACACGGATTCAATGCCTTCCATGGACGATCTCGAGGACGATGACAA
AAGAGAAATGGTTAAGCACTTACTTGTGGCTGCAGATAAGTATGCCATGGAAAGGATGAAGATGGTATGTGAACGCATGC
TATGCAAGAGTCTTGATGTTGAGAATGTGGCGACCATATTAGCTCTAGCTGACCAGCATAACTGCAGAAATCTCAAAGAT
GCTTGCATTGAATTTATGCTCTCTTCGAATAGAATGAATGATGCGGTCGCAAGCCAAGGGTATGTACAACTCAAAAGATC
TTCGCCTGATATCATTGTAGATGTGTTGGAGAGGGCAGCCAAGTCCCGCAAAATTTAGTACGCCAACCTGGTATGAGCTA
CTGCTTATCCTTCCGTTCCAATTGATCTTTCGAGGCAAATGCCTTATGTTGGGTTGAAGAAGGCAACTAAGTCATGCTAA
ATTTATAGTATAGTGCCCATCCTGGGTTAGCTTCTCTCTAGTTAATTACTTTTGCTAAATAGTGACCTTAGATGAGATTG
TCATGTCCAAGTTTCCAGAGATCTTTTGGAGTAAGCAGTTGGTTCAATAAAATGTATGTCTACAGTGTATTGGTTGCCCC
A-------------------------------------TATGATATAAGTATATATGAATCTACGGTAGCTCACTAGTTG
CCTTTGTTATCTGCTCGCTTTAATATCTGGCTTATGTGAGGAATGATAAAACTTTGAGTTCGTTGCTATCACATTTCAAA
TACTCTCGTTTTACCTATATGAAAAACTTACATTTTGAATGCCAGCTGTTAGATTTTAGTTAGAGACATTTACAAATGGT
TTCTTGACATGAAACTTGGTTGCACACAGTTTGTCTTTGATTTAGAAAATTTCAGTTAGCAAATGAAGTTGAAGTCTTGA
ACCAGACTACTTTGAGATCAGGAGCAGGCAATTGTAGATTTAATTTTCAGTTCGTACTACTTCTATTAGCATACGTTCAG
TGAAGCCTCTGTGTATGTTCGCTACACAGCACAATCCTGTAAGAAATAGGCAACTACTTATGCCTCTGTACTTGTATTTG
TACATAATTGAGGGAGGGG-------------------------------------------------------------
-------------------------------------------TTAACCATAAAAAAACTGAGAGAGGGATTGAGAGGAA
TCTGGAGGTTTAATCCCTACAGGGAATGGGTGATGGAGTGGGGATCGCCCTAGTGCTGGGTGGATTGAAATCTCCGAGGG
TATCAGATCCCCACCAACTGAACAAAGCCTATTGTGATTCGTGTACAATGCACCCCTCTGTTTAACTCTGCTCCTGCGCC
GCCTGAAGCTGCAAGGTGACAATGGCACCGGCTCGTGGATCTCACTCTGAAATGGTTAAGCACTTACTCGTGGCTGTGGC
AAGTATGCCATGGAAAGGGTGAAGATGATATGTGAAGGCATGCTATGCAAGAGTCATGATGTTGAGACTCTGGCGACCAA
ATTAGCTCTGGCTGACCAGC------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------ATCATTGCAG
TAACCTCAAAGATGCTTGCATTGAATTTATGCTCTCTTCAAATAGAATGAATGATGTGATCGCAAGCCAAGATTATCAAT
AC------------------------------------------------------CTCAAAAGATCTTCTCCTGATGTC
ATCATGGATGTGTTGGAGAGAGCAGCCAAGTCCCACAAGGTT-----------------------------
>chr5D_1354
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------AGGG---GAAAGGAGCAGACC
TGACTTT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------CAAG
GTTCGAGGGGAGGTTTTT---------------------------------TCTGCTCATAAGATTTTGCTTGCGACGCG
GTCGGCGGTCTTCGATGCGGAGTACTACGGGCCGATGGGGGACAAAGG-GACACATGAAATAACTATTGATGACATGCAG
CCTGCTGTTTTCAAGGCATTTCTTCACTTCATCTACACGGATTCAATGCCTTCCATGGACGATCTCGAGGCTGATGACAA
AAGAGAAATGGTTAAGCACGTACTTGTGGCTGCAGATAAGTATGCCATGGAAAGGATGAAGATGGTATGTGAACACATGT
TATGCAAGAGTCTTGATGTTGAGAATGTGGCGACCATATTAGCTCTAGCTGACCAGCATAATTGCAGAAATCTCAAAGAT
GCTTGCATTGAATTTATGCTCTCTTCGAATAGAATGAATGATGTGATCGCAAGTCAAGGGTATGTACAACTCAAAAGATC
TTCGCCTGATATCATTGTAGATGTGTTGGAGAGGGCAGCCAAGTCCCGCAAAATT-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>chr5B_1359
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------AGGAGGAGACG
TGACTTT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------CAAG
GTTCAAGGGGAGGTCTTT---------------------------------TCCGCGCATAAGATTTTGCTTGCGATGCG
ATCGGCGGTCTTCAACGCGGAGTTCTATGGTCCGTTGGGGGACAAAGG-TGTACAGGACATAATTATTAACGACATGCAG
CCTGCTGTTTTCAAGGCATTTCTTCACTTCATCTACACCGATTCATTGCCTTCCATGGATGATCTTGATGATGATGACAA
AAGAGAAATGGTTAAGCACTTACTTGTGGCTGCAGATAAGTATGCGATGGAAAGGATGAAGAGGGTATGTGAAGGGATGC
TATGCAAGTGTCTTGATGTTGAGACCGTGGCGACCATATTAGCTCTGGCTGACCAGCATCATTGCAGCAACCTCAAAGAT
GCTTGCACTGAATTTATGTTCTCTTCAAATAGATTGAATGATGTGATCGCAAGCCAAGGGTATGTTCAACTCAAAAGATC
TTCTCCTGATATCATTGTAGATGTGTTGGAGAGAGCAGCCAAGTCCCGCAAAATT-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>chr5B_1359
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------AGGAGCGGACG
TGACTTT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------CAAG
GTCCAAGGGGAGGTTTTT---------------------------------TCTGCTCATAAGGTTTTGCTTGCGACGCA
ATCAGCGGTCTTCGACGCGGAGTTCTACGGGCCGATGGGGGGCAAAGG-GGCGCAGGACATAACTATAGATGGCATGCAG
CCTGCTGTTTTCAAGTCATTTCTTCACTTCATCTACACGGATTCAATGCCTTCCATGGACGATCTCGAGGATGATGACAA
AAGAGAAATGGTTAAGCACTTACTTGTGGCTGCAGATAAGTATGCCATGGAAAGGATGAAGCTGATATGTGAAGGCATGC
TATGCAAGAGTCTTGATGTTGAGAATGTGGCGACCATATTAGCTCTAGCTGACCAGCACAATTGCAGCAATCTCAAAGAT
GCTTGCATGGAATTTATGCTCTCTTCGAATAGAATGAATGATGTGATCGCAAGCCAAGGCTATGTACAACTCAAGAGATC
TTCGCCTGATATCATTGTGGATGTATTGGAGAGAGCAGCTAAGTCCCGCAAAATT-------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------
>SNPs
SSSSSSSSSSSS--------S--SS---------------------------------SS-S------S----------S
S-------S---------------S-------------------S-----------------------------------
---SSSS---------------------S------------------S--------S-----------------------
---S----------------SS------S----S-S----S---------------------------------------
------S---S----S----------S----------------S---------------S--------------S----S
----------------------S--SS---S-S-SSS---------S-------------------S----------S-S
S------------------S--------------S---S--S----------S-----S-S-S-S---------------
----------------------------S-----------S--------------------------------S-S----
S-------S-----S------------------S------S---S------------S-------S--------------
-----SS-SS--SSS-SS--------------------------------------------S-----------------
--------------------------------------------------------------------------------
---------------------S----------------------------------------------------------
-----------------------------------------------------------------------S--------
-----------------------------------------------------------S--------------------
--------------------------------------------------------------------------------
-------S---S--------------------------------------------------------------------
---------------------------------------------------------------------------S----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S--------------------------------------------------------------
--------------------------------------------S-----------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
---------------------------------------------------------------------------S----
-------------------------------------------------------S------------------------
--------------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
------------------------------------------------------S-------------------------
-----------------S--------------S----S------------------------------------------
---------------------S----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------S--------------------------------S-----------------
------------------------------S-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------S-------------------------------S-----------
--S--------------S-----SS----------------------S------------SS--S---------------
--------------S-----S----S--------------S---S---------------------------------S-
---------------------------------------------SS-S----S----S-------S-SSSSSSSSS---
-----S-----------S---------S---S--------S----------------S---S------------------
--------------SS----------------SS-SSSSS----------------------------------------
S------------------SSSSS----------SS------------------------------S---S-----S---
-------------------S---------------S------------S----------------------
>forward_733
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------AGCGACA
TATAAGGCCACGG-------------------------------------------------------------------
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>reverse_3872
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-------------------------------CGCTTACAAGTGAAGGGCCT-----------------------------
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-----------------------------------------------------------------------
