>input_sequence_66204
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------------------------------------------ATGATGGAGAGGAAGGGAGGGTGCTGCTTGGCGCCGAG
GGCC---------GCC---------CAGGCAGGCCAGGGGTGGCACATGGGAAGGGCCATGCTGAAGTTTAGGCCCATCG
CGCCAAAGCCGGCGGCGATGTCGCCTGCGCCGATGCCGGCCGTGCCGGCTGGGAAGGGGAAGGGGAAACGGAAGGCGGTT
GCAGGGCCAGGGGGCACTGGGAGGAGGGGACCGAAGCCCAAGAAGTCGGCCACTGTGGCTGCACCGACGACGCAAAAGTT
GGACTATGTGCAGGACAAGCGTTTGTCCTCGCCGTCGTCCTCCTCGTCGGGGATGACGTCCGTCGACTCGTCGCCTCCTC
CACCCCTGCCTGCAACCCTGCC------------GCTCATGCCTGCGCTGCCGGCAGAGGAGGGGTTCGGTGGGGCGGCG
CCGGTGGCGAATCTGGCGTCTGCCCACGTTGTCAGACA---------GCCGCAGGCCCTGCGGCAAGTGGTGTCCTGGGT
GACGGTTGAGGACGTTACAAGCATCTGGCGCGACGGCGAGGCGCCGTATGCTGCGGCCTGCGGCGGCGACGAGGCCCCAA
CGTTCGTGTCCGACCAGTGCGGCCGCGTCACGTGGACAAACGTGGCTTTCAACCGGGCAGTGTCCGGTAGGGAGGACGCC
GACGCTACCATGGCCCCATCGGCGGCTGCTTCCGAGGTGCGGGTGGTGCTCGCCGCCAAGGATGGCGCCCCCGTGCCGGC
GTGGGGCTCATGTGCCGGTTTCACCTGTCGGGTGCGCGTCCCGTACGCATGCCCTCGCCGAGGTTCCCTCGTGGCCCCGT
GCGACGTGTGGCGGCTAGACGCTGGCGGCTACCTCTGGCGGCTCGACCTTCAGGCCACCCTCAGTCTCTCCCTCGGCGGC
TTCATTTGA-----------------------------------------------------------------------
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>chr3B_1_TraesCS3B01G247700
CTTTCCCTAAGATAAAGCAGCAGCTATGGGGCCACGAGCCATTGATCTTCCAGACGGTCCCTCTGACCGCTCTACGTGTT
CCCTCCCCACCAATAAAGCGCTGCACACTGGACGCACTCCCATTGGTCCAAAATCCTCACCCCCACTCTACCCACCCGAC
CACCGCCACCTTTACCCGCAGCAACAACACACGCAAAACCT-GAACTTCGGCCCACAGACATGTGGACCTCATAGCTCCG
TCAGGCCCACCTCTCAGTGAGGTGCGCGTGCTTGTACTTGTAGCCGAAGCGAATTACGCCTTTTGCGCTCTCTTGTGTTC
TACGGATGGGGCAGCAAGCAAGCGACACGTCGCGCTAGCGCTAGTACAAATCTCTTCTCTTACTGGCCAGTCTGGTACTC
CTAGTACTCCCTCCGTCTAGGTGTGTAAGTCATCTTATGAAAACCAAATAATCCCAAAACACTTAGGCGCGGTGCATTAA
ATTTTATCTCGTTTTTTGTTTCTTGACATATCAACCAATAAGATATGTGGGGTGTACATGTTTTTAATGACTTGAGACTA
CCAAACACGACATGCAGTGGCTAGTTCATTGCATGCAATGCTATTAATTAGCAAATGAACATTAAGTTCTCTTGTTTTTT
CCTCTTCCTTGGTCACGGTGCATAACCTAAGATGACTTACTCACGTAGATGGAGGGAGTAGATATTTAAATCCGCTTGCG
TGCCACGGCAGCCATGGCGAGCGCGCCCAATGGGGTCGCGGCCTTTCACGTGCTGCCGCTGCCCGTCGGGGGCCAGGTGG
TGTCGCGAGACCAATCATAGCCCGCTCCCACTCGCGACACCTGTGCTCCCTGACGCGTGTCCCTTGCGCGTCCTTG-ATA
AAACCAACCTGCTTGCCGCCGTGGTCTACTCGCACCGCGCCGAGAAAGTAGCACTCGGTGTAGCTGAGACTAGTCGCAGG
CTCGCAGACGTTCTGTTCTGCTTCCGCCGAGGTGCGTGGTGTATGATGGAGAGGAAGGGAGGGTGCTGCTTGGCGCCGAG
GGCC---------GCC---------CAGGCAGGCCAGGGGTGGCACATGGGAAGGGCCATGCTGAAGTTTAGGCCCATCG
CGCCAAAGCCGGCGGCGATGTCGCCTGCGCCGATGCCGGCCGTGCCGGCTGGGAAGGGGAAGGGGAAACGGAAGGCGGTT
GCAGGGCCAGGGGGCACTGGGAGGAGGGGACCGAAGCCCAAGAAGTCGGCCACTGTGGCTGCACCGACGACGCAAAAGTT
GGACTATGTGCAGGACAAGCGTTTGTCCTCGCCGTCGTCCTCCTCGTCGGGGATGACGTCCGTCGACTCGTCGCCTCCTC
CACCCCTGCCTGCAACCCTGCC------------GCTCATGCCTGCGCTGCCGGCAGAGGAGGGGTTCGGTGGGGCGGCG
CCGGTGGCGAATCTGGCGTCTGCCCACGTTGTCAGACA---------GCCGCAGGCCCTGCGGCAAGTGGTGTCCTGGGT
GACGGTTGAGGACGTTACAAGCATCTGGCGCGACGGCGAGGCGCCGTATGCTGCGGCCTGCGGCGGCGACGAGGCCCCAA
CGTTCGTGTCCGACCAGTGCGGCCGCGTCACGTGGACAAACGTGGCTTTCAACCGGGCAGTGTCCGGTAGGGAGGACGCC
GACGCTACCATGGCCCCATCGGCGGCTGCTTCCGAGGTGCGGGTGGTGCTCGCCGCCAAGGATGGCGCCCCCGTGCCGGC
GTGGGGCTCATGTGCCGGTTTCACCTGTCGGGTGCGCGTCCCGTACGCATGCCCTCGCCGAGGTTCCCTCGTGGCCCCGT
GCGACGTGTGGCGGCTAGACGCTGGCGGCTACCTCTGGCGGCTCGACCTTCAGGCCACCCTCAGTCTCTCCCTCGGCGGC
TTCATTTGACTGCGTAACTGCGTACGCATTCCTTGTACGGAGACCGGGAGACGTATGAACCAATCAAAATCATGTGTTAG
TCTGCGCTATGATTATGGTATTAATTTAGCAGTCATGACTCGTTACCAGATTTGGTATACTCTTATTATGAACTGAACT-
-AGGAGTAGAGTAGTTTAAGTAAGAAGAGGGGCAGAGATGCAAGCGCAAAAG-ATTTCTTTCTAACAATGGTAGGGTCCC
CCAGATCGGATTTGGGGAGGGAAGTGCTGGCCAGATCGGATTTCCCTCAGATTCAATCT-GGCCTTGGGGTTGAGTTCGT
TGCACGGCGGTCACCTGGAGCG-GGTGAAGGCCGTCGTGCTGGATTCAGCCCTTGCACGGCATGGTTAGCTGCTGCGGCT
CCTCGTTTGGG-TGGTTTGTGGCTGTT-GGTCGCGTTCTCTCGGCAGTGCGGGTGCGGGAGGACCTCGGTTGCACGGCTT
CGATGGCAAGTTGCTACGGTGACGGCGGTGCGAGACTTCATGGTCGGTTCTGCCTATATCT-GGAGGTGCGGAGATGCGT
GGCATTACGGATGAAAGTCTTGCCCGGTTGTGGCCGGGCCGGCGGCGATGGCACCCGTGGGTGTCGTTTCCCTCCTTGAA
GGCGTCGCCGAGTGTGTCGCCATCTCCCTCG-------------------------------------------------
---------------------------------------------------CTCGCTTGGTGTTGGCAATTGTCTCCGGG
TGAAAGCCTTGATCTGGTGCTGGGTGCTGGATCGGCACGATGGCGGTGTCTTCAACATCGTCCCTCTGTTGGGTGCATCG
TGCCA-GAGACATGGTCTGGTTGTCCCATGTTGCGCTCCTCCGGTGTTCGCCGCTGCACGTAATCGCTC-ACGTCGGTGT
TATGTACGATCTTCGC-GGTGATTTCAAGACGACGTCTTCCTCGG-GTCAGATCGGGTCCTGCCATCCTCTTGCCATCTC
CTTTAGGCATTAAGGGAGGATGGTGCATCGACAAGAGATGCTTGGTGGAAGTTGCTGCTCTTCGGTGGTGATCGTTGTCG
G
>chr3D_1
CTTTCCCTAAGATAAAGCAGCAGCGATGGGGCCACGAGCCATCGATCTTCCAGACGGTCCCTCTGACCGCTCTACGTGTT
CCCTCCCCACCAATAAAGCGCTGCACACTGGACGCACTCCCATTGGTCCAAAATCCTCACCCCCACTCTACCCACCCGAC
CACCGCCACCTTTACCCGCAGCAACATCACACGCAAAACCTCGAACTTCGCCCCACAGACATGTGGACCTCATAGCTCGG
TCAGGCCCACGTCTCAGTGAGGTGCGCGTGCTTGTACTTGTGGCCGAAGCGAATCACGCCTTTTGCGCTCTCTTGCGTTC
TAGGGATGGGGCAGCAAGCAAGGGACACGTCGCGCTAGCGCTAGTACAAATCTCTTCTCTTACTGGCTAGTCTGGTACTC
AT------------------------------------------------------------------------------
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--------------------------------------------------------AGCAGATATTTAA-TCCGCTTGCG
TGCCACGGCAGCCATGGCGAGCGCGCCCAATGGGGTCACGGCCTTTCACGTGCTGCCGCTGCCCGTCGGGGGCCAGGTGG
TGTCGCGAGACCAATCATAGCCCGCGCCCACTCGCGACACCTGTGCTCCCTGACGCGTGTCCCTTGCGCGTCCTTGTATA
AAACCAACCTGATTGCCGCCGTGGTCTACTCGCACCGCGCCGAGAAAGTAGCACTCAGTGTAGCTGAGACTAGTCGCTGC
--------TGTTCTGTTCTGCTTCCACCGAGGCGCGTGGTGTATGATGGAGAGGAAGGGAGGGTGCTGCTTGGCGCCGAG
GTACGCAGCCGGGGCCGCCCAGGCACAGGCAGGCCAGGGGTGGCACATGGGAAGGGCCATGCTGAAGTTTAGGCCCATCG
CGCCAAAGCCGGCGGCGATGGCGCCTGCGCCGATGCCGGCCGTGCCGGCTGGGAAGGGGAAG------CGGAAGGCGGTT
GCAGGG------GGTACTGGGAGGAGGGGACGGAAGCACAAGAAGCCAGCCACTGTGGCTGCACCGACGACGCAAAAGTT
GGACTACGTGCAGGACAAGCCTTTGTCCTCGCCGTCCTCCTCCTCGTCGGGGATGACGTCCGTCGACTCGTCGCCTCCTC
CACCCCT------------GCCTGCAACCCTGCCGCTCATGCCTGTGCTGCCGGCAGAGGAGGGGTTCGGTGGGGCGGCG
CCGGTGGCGAATCTGGCGCCTGCCCACGTTGCCGGACTGGTCCTGCCGCCGCAGGCCTTGAGGCAAGTGGTGTCCTGGGT
GACGGTTGAAGACGTTACAGGCATCTGGCGCGACGGCGAGGAGCCGTACGCTGCGGCCTGCGGCGGCGACGAGGGCCCAA
CGTTCGTGTCCGACCAGTGCGGCCGCGTCACCTGGACAAACGTGGCTTTCAACCGGGCAGTGTCCGGTAGGGAGGGCGCC
GACGCTGCCATGGCCCCGTCGGCGGCTGCTTCCGAGGTGCGGGTGGTGCTCGCCGCCAAGGATGGCGCCCCCGTGCCGGC
GTGGGGCTCCTGTGCCGGTTTCACCTGTCGGGTGCACGTCCCGTACGCATGCCCTCGCCGAGGTTCCCTCGTGGCCCCGT
GCGACGTGTGGCGGCTAGACGCTGGCGGCTACCTCTGGCGGCTCGACCTTCAGGCCACCCTCAGCCTCTCCCTCGGCGGC
TTCATTTGACTGCGTAACTGCGTACGCATTCCTTGTAC--------GGAGACGTATGAACCAATCAAAATCATGTGTTAG
TCTGCGCTATGATTATGATATTAATTTAGCAGTCATGATTCATGACCAGATTTGGTATACTCTTATTATGAACTGAACT-
-AGAGTAATT----------TAAGAAGAGGGGTAGAGATGCAAGTGCAAAAGGATATCTTTCTAACAATGGTAGGGTCCC
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>chr3A_1
CTTTCCCTAAGAAAAAGCAGCATCGATGGGGCCACGAGCCATCGATCTTCCAGACGGTCCCTCTGACCGCTCTACGTGTT
CCCTCCCCACCAATAAAGCGCTGCACACTGGACGCACTCCCATTGGTCCAAAATCCTCACCCCCACTCTACCCACCCGAC
CACCGCCACCTTTACCCGCAGCAACAACACACGCAAAACCTCAAACTTCGTCCTACAGACATGTGGACCTCATAGCTCGG
TCGGGCCCACGTCTCAGTGAGGTGCGCGTGCTTGTACTTGTGGCCGAAGCGAATCACGCCTTTTGCGCTCTCTTGCGTTC
TACGGATGGGGCAGCAAGCAAGGGACACGTCGCGCTAGCGCCAGTACAAATCTCTTCTCTTACTGGCTAGTCTGGTACTC
CT------------------------------------------------------------------------------
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--------------------------------------------------------AGCAGATATTTAA-TCCGTTTGCG
TGCCACGGCAGCCATGGCGAGCGCGCCCAATGGGGTCGCGGCCTTTCACGTGCTGCCGCTGCCCGTCGGGGGCCAGGTGG
TGTCGCGAGACCAATCATATCCCGCTCCCACTCGCGACACCTGTGCTCCCTGACGCGTGTCCCTTGCGCGTCCTTGTATA
AAACCAACCTGCTTGCCGCCGTGGTCTACTCGCACCGCGCCGAGAAAGTAGCACTCAGCGTAACTGAGACTAGTCGCTGC
--------CGTTCTCTTCTGCTTCCGCCGAGGCGTCTGGTGTATGATGGAGAGGAAGGGAGGGTGCTGCTTGGCGCCGAG
GTACGCAGCCGGGGCC---------CAGGCAGGCCAGGGGTGGCACATGGGAAGGGCCATGCTGAAGTTTAGGCCCATCG
CGCCAAAGCCGGCGGTGATGGCGCCTGCGCCGATGCCGGCCGTGCCCGCTGGGAAGGGGAAGGGGAGACGGAAGGCGGTT
GCAGGGCCAGGGGGTACCGGGAGGAGGGGACGGAAGCCCAAGAAGCAGGCCACGGTGGCTGCACCGACGACGCAAAAGTT
GGACTACGTGCAGGACAAGCCTTTGTCCTCGCCGTCCTCCTCCTCGTCGGGGATGACGTCCGTCGACTCGTCGCCTCCTC
CACCCCT------------GCC------------GCTCATGCCTGTGCTGCCGGCAGAGGAGGGGTTCGGTGGGGCGGCG
CCGGTGGCGAATCTGGCGCCTGCCCACGTTGCCGGACTGGTCCTGCCGCCGCAGGCGCTGCGGCAAGCGGTGTCCTGGGT
GACGGTTGAGGACGTCACAGGCATCTGGCGCGACGGCGAGGCGCCGTACGCTGCGGCCTGCGGCGGCGACGAGGCCCCAA
CGTTCGTGTCCGACCAGTGCGGCCGCGTCACGTGGACAAACGTGGCTTTCAACCGGGCAGTGTCCGGTAGGGAGGACGTA
GACGCAGCCATGGCCCCGTCGGCGGCCGCTTCCGAGGTGCGGGTGGTGCTCGCCGCCAAGGATGGCGCCCCCGTGCCGGC
GTGGGGCTCCTGTGCCGGTTTCACCTGTCGGGTGCGCGTCCCGTACGCATGCCCTCGCCGAGGTTCCCTCGTGGCCCCGT
GCGACGTGTGGCGGCTAGACGCTGGTGGCTACCTCTGGCGGCTCGACCTTCAGGCCACCCTCAGCCTCTCCCTCGGCGGC
TTCATTTGACTGCGTA--------CGCATTCCATGTAC--------GGAGACGTATGAACCAATCAAAATCATGTGTTAG
TCTGCGCTATGATTATGGTATTGATTTAGCGGTCATGACTCATTACCGGATTTGGTATACTCTTATTATGAACTGAACTG
TAGAGTAGTT----------TAAGAAGAGGGGTAGAGATGCAAGTGCAAAA-GATTTCTTTCTAACAATGGTAGGGTCC-
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>chr3B_2123
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------CGGATTGGTGGAGGGACGTGCTGGCCAGATCGGATTCCCTCCAGATTCAATCT-GGCCTTGGGGCTAAGTTCGT
TGTGCGGTAGTCCCCTGGTGCGAGGTGAAGGCCGTCGTGCTGGATTCAGCTCTTGCACGGCATGGTTAGCTCCTGCGGCT
CCTCGTCTGGGGTGGTTTGTGGCTACT-AGTCGCGTTCTCTCGGCAGTGCAGGTGTGGGAGGACCTCGGCTGCACGGCTT
CGATGGCAAGTTGCTGCGGTGATGGCGGTGCGAGACTTCATGGTCGGTACTGCCTACACTT-GGAGGTGCGGAGATGCGT
GGCATTACGGATGAAAATCCTGTCCGGTGGTGATCGGGCCGACGGCGATGGCACCCGTGGGTGTCGTTTCCCTCCTTGGA
GGCGTCGCCGAGTGTGTCACCATCT-CCTCG-------------------------------------------------
---------------------------------------------------CTCGCTTGGTGTTGGCAATTGTCTTCGGG
CGAAAGCCTTGATCC-------GGTGCTGGATCGGCACGATGGCGGCGTCTTCAACGTCGTCCCTC--------------
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>chr1B_2123
CGGAGTTGGGG---------------------------------------------------------------------
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-----------------AGGGAGGTGCTGGCCAGATCGGATTTCCCCCAGATTCAATCT-GGCCTTGGGGTTGAGTTCGT
TGCGCGGCAGTCACCTGGAGCG-GGTGAAGGCCGTCGTGCTGGATTCAGCCCTTGCACGGCATGGTTAGCTGCTGCGGCT
CCTCGTCTGGG-TGGTTTGTGGCTGTT-GGTCGCGTTCTCTCGGCAGTGCGGGTGTGGGAGGACCTTGGCTGCACGGCTT
CGATGGCAAGTTGCTGCGGTGACGGCGGTGCGAGACTTCTTGGTCGGCTCTGCCTATACCT-GGAGGTGCGGAGATGCGT
GGCATTACGGATGAAAGTCTTGTCCGGTTGTGGCCGGGCCGGCGGCGATGGCACCCGTGGGTGTCGTTTCCCTCCTTGGA
GGCGTCTCCGAGTGTGTCGCCATCTCCCTTG-------------------------------------------------
---------------------------------------------------CTCGCTTGGTGTTGGCAATTGTCTCCGGG
CGAAAGCCTTGATCC-------GGTGCTGGGTCGGCACGATGGCGGCGTCTTCAACGTCGTCCCTCTGTTGGGTGCATCG
TGCTAGGAGACATGGTCTGGTTGTCCCTTGTTGCGCTCCCCCGGTGTTCGCCGCTGCCCATAATCGCTC-ACTTCGGTGC
TATGCACGATCCTCAC-GGTGATTTCAAGACGGCGTCTTCCTTGG-GTCAGATCGGGTCCTGCCATCCTCTTGCCATCTC
CT--AGGCATCAAGGGAGGATGGTGCGTCGACAAGAGATGCTTGGTGGAAGTTGCTGCTCTTCGGTGGTGACCGTTGTCG
G
>chr1B_2123
CGGAGTTGGGG---------------------------------------------------------------------
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-----------------AGGGAGGTGCTGGCCAGATCGGATTTCCCCCAGATTCAATCT-GGCCTTGGGGTTGAGTTCGT
TGCGCGGCGGTCACCTGAAGCG-GGTGAAGGCCGTCGTGCTGGATTCAGCCCTTGCACGGCATGGTTAGCTGCTGCGGCT
CCTCGTCTGGG-TGGTTTGTGGCTGTT-GGTCGCGTTCTCTCGGCAGTGCGGGTGTGGGAGGACCTTGGCTGCACGGCTT
CGATGGCAAGTTGCTGCGGTGACGGCGGTGCGAGACTTCTTGGTCGGCTCTGCCTATACCT-GGAGGTGCGGAGATGCGT
GGCATTACGGATGAAAGTCATGTCCGGTTATGGCCGGGCCGGCGGCGATGGCACCCGTGGGTGTCGTTTCCCTCTTTGAA
GGCGTAGCCGAGTGTGTCGCCATCTCCCTCG-------------------------------------------------
---------------------------------------------------CTCGCTTGGTGTTGGCAATTGTCTCCTGG
CGAAAGCCTTGATCC-------GGTGCTGGGTCGGCACGATGGCGGCGTCTTCAACGGCGTCCCTCTGTTGGGTGCATCG
TGCTAGGAGACATGGTCTGGTTGTCCCTTGTTGCGCTCCCCCGGTGTTCGCAGCTGCCCATAATCGTTC-ACTTCGGCGC
TATGCACGATCCTCGC-GGTGATTTCAAGACGGCGTCTTCCTCGG-GTCAGATCGGATCCTGCCGTCCTCTTGCTATCTC
CT--AGGCATCAAGGGAGGATGGTGCGTCGACAAGAGATGCTTGGTGGAAGTTGCTGCTCTTCGGTGGTGACCGTTGTCG
G
>chr6B_2123
CGGAGCTGGGG---------------------------------------------------------------------
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-----------------AGGGAGGTGCTGGCCAGATCGGATTTCCCCCAGATTCAATCT-GGCCTTGGGGTTGAGTTCGT
TGCGCGGCAGTCATCTGGAGCG-GGTGAAGGCCGTCGTGCTGGATTCAGCCCTTGCACGACATGGTTAGCTGCTGCGGCT
CCTCGTCTGGG-TGGTTTGTGGCTGTT-GGTCGCGTTCTCTCAGCAGTGCGGATGTGGGAGGACCTTGGCTGCACGGCTT
CGATGGCAAGTTGCTGCGGTGACGGCGGTGCGAGACTTCTTGGTCGGCTCTGCCTATACCT-GGAGGTGCGGAGATGCAT
GGCATTACGGATGAAAGTCCTGTCCGGTTGTGGCCGGGCTGGCGGCGATGGCACCCGTGGGTGTCGTTTCCCTCCTTGGA
GGCGTCGCCGAGTGTGTCGCCATCTCCCTCG-------------------------------------------------
---------------------------------------------------CTCGCTTGGTGTTGGCAATTGTCTCCGAG
CGAAAGCCTTGATCC-------GGTGCTGGGTCGGCACGATGGCGGCGTCTTCAACGTCGTCCCTCTATTGGGTGCATCG
TGCTAGGAGACATGGTCTGGTTGTCCCTTGTTGCGCTCCCCCGTTGTTCGCCGCTCCCCATAATCGCTC-ACTTCGGCGC
TATGCACGATCCTCAC-GGTGATTTCAAGACGGCGTCTTCCTCGG-GTCAGATCGGGTCCTGCCATCCTCTTGCCATCTC
CT--AGGCATCAAGGGAGGATGGTGCGTCGACAGGAGATGCTTGGTGGAAGTTGCTGCTCTTCGGTGGTGACCGTTGTCG
G
>chr5B_2123
CGGAGTTGGGG---------------------------------------------------------------------
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-----------------AGGGAGGTGCTGGCCAGATCGAATTT-CCCCAGATTCAATCT-GTCCTTGGGGTTGAGTTCGT
TGCGCGGCAGTCACCTGGAGCG-GGTGAAGGCCGTCGTGCTGGATTCAGCCCTTGCACGGCATGGTTAGCTGCTGCGGCT
CCTCGTTTGGG-TGGTTCGTGGCTGTT-GGTCGCTTTCTCTCGGCAGTGCGGGTGTGGGAGGACCTTGGCTGCACGGCTT
CGATGGCAAGCTGCTGCGGTGACGGCGGTGCGAGACTTCTTGGTCGGCTTTGCCTATACCT-GGAGGTGCGGAGATGCGT
GGCATTACGGATGAAAGTCCTGTCCGGTTGTGGCCGGGCCGGCGGCGATGGCACCCGTGGGTGTCGTTTCCCTCCTTGGA
GGCGTCGCCGAGTGTGTCGCCATCTCCCTCGCTCGCTTGGTGTTGGCAATTGTCTCCGGGCGCGGCGATGGCACCCGTGG
GTGTCGTTTCCCTCCTTGGAGGCGTCGCCGAGTGTGTCGCCATCTCCCTCGCTCGCTTGGTGTTGGCAATTGTCTCCGGG
CGAAAGCCTTGATCC-------GGTGCTGGGTCGGCACGATGGCGGCGTCTTCAACGTCGTCCCTCTGTTGGGTGCATCG
TGCTAGGAGACATGGTCTGGTTGTCCCTTGTTGCGCTCCCTCGGTGTTCTCCGCTGTCCATAATCGCTC-ACTTCGGCGC
TATGCACGATCCTCGC-GGTGATTTCAAGGCGGCGCCTTCCTCGGTGTCAGATCGGGTCCTGCCATCCTCTTGCCATCTC
CT--AGGCATCAAGGGAGGATGGTGCGTCGACAAGAGATGCTTGGTTGAAGTTGCTGCTCTTCGGTGGTGACCGTTGTCG
G
>chr3D_2129
TGGT-----GG---------------------------------------------------------------------
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-----------------AGGGAGGTGCTGGCCAGGTCGGATTCCCCCCAGATTCAATCT-GGCCTTGGGGCTGAGTTTGT
TGCACGGCAGACCCCTGTTGCG-GGTGAAGGCCGTCGTGCTGGATTCAGCTCTTGCACGGCATGGTTAGCTGCTGCGGCT
CCTCGTCTGGG-TGGTTTCTGGCTGTTGGGTCGCGTTCTCTCGGCAGTGCGGGTGTGGGAGGACCTCGGCTGCACGGCTT
CGATGGCAAGTTGCTGCAGTGACGGCGGTGCGAGACTTCATGGTCGGTACTGCCTATACCT-GGAGGTGCGGAGATGTGT
GGCATTACGGATGAAAATCCTGTCCAGTTGTGGCCGGGCCGGCGGCGATTGCACCCGTGGGTGTCGTTTCCCTCCTTGGA
GGCGTCGCCGAGTGTGTCGTCATCTTCCACC-------------------------------------------------
---------------------------------------------------CTCGTTTGGTGTTGGCAATTGTCTCCGGG
CGAAAGACCTGATCT-------GGTGCTGGATCGGCACGATGGCGCCCTCTTCAACGTCGTCCCTCTATTGGGTGCATCG
TGCCAGGAGACATGGTCTGGATGTCCCATGTTGCGCTCCTCCGGTGTTTGCCGCTGCCCATAATCATTC-ACTACGGCGC
TATGTACGGTCTTCGC-GGTGATTTCAAGACGGCGCCTTCCTCGG-GTCAGATCGGGTCCTGCCATTCCCTTGCCATATC
CTTTAGGCATCAAGGGGGGATGGTGCGTCGACAAGAGATGGTTGGCGGGAGCTGCTGCTCTTCGGTGGTGACCGATGTCG
G
>chr6A_2129
TGGT-----GG---------------------------------------------------------------------
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-----------------AGGGAGGTGTTGGCCAGATCGCATT-CCACCAGATTCAATCC-GGCCTTGGGGCTGAGTTCGT
TGCACGGCAGTCCCCTGGTGCG-GGTGAAGGCCGTCGTGCTGGATGCAGCTCTTGCACGACATGGTTAGCTGCTACGGCT
CCTCATCTGGG-TGGTTTGTGGTTGTTGGGTCGTGTTCTCTTGGCAGTGCGGGTGTGGGTGGACCTCGGTTGCACGGCTT
CGATGGCAAGTTGCTACGACGACGGCTGTGCGAGACTTCATGGTCGGTACTACCTATGCCT-GGAGGTGTGGAGATGCGT
GGCATTACGGATGAAAATCATGTCCGATTGTGGCCGGGCCGGCGGCGATGGCACCCGTGCCTGTCATTTCCCTCCTTGGA
GGCGTCGCCGAGTGTGTCGCCATCTCCCTCG-------------------------------------------------
---------------------------------------------------CTCGCTTGGTGTTGGCAATTGTCTCCGGG
CGAAAGCCTTGATCC-------GGTGCTGGATCGGCACGATGGCGGCGTCATCAATGTCGTTCTGCTATTGGGTGCATCG
TGCCAGGAGACATGGTTTGGTTGTCCCATGTTGCACTCCTCCCGTGTTCGCCGCTGCCCATCATCATTC-ACTAAGGCGC
TATGTACGGTCTTCGC-GGTGATTTCAAGACGGCGCCTTCCTCAG-GTCAGATCGAGTCCTGCCATCCTCTTGCCATCTC
CTTTAGGCATCAAGGGAGGATGGTGCGTCGACAAGAGATGCTTGGCGGAAGCTGCTGCTCTTCGGTGGTGATCGATGTCG
G
>chr1B_2136
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-------------------GGAGGTGCGGGTCAGATCTGAATCCCCTCATATTCGATTTGGGCCTTGGGGTTGATTTCAT
TGCGCGGCAGTCCCCTGGTGCG-GGTGAAGGCCGTCGTGGTGGATTTGGCTCTTGCACGGTGTGTTTGGATGCTGCGGAT
CCTCGTCTGGG-TGGATGGTGGCTGTTGGGTCGCGTTCTCTCGGCAGTGCGGGTGTGGGAGGACCTTGGCTGCGTGGCTT
CAACGGCAAGTTGCTGCAGTGACGGCGGTGCGAGGCTTCATGGACGGTTCTGCCTAAACCTTGGAGGTGTGGAGATG-GT
GGCATTACGGATGAAAATCCTGCCAGGTTGTCACCAGGCCGGCGGCGATGGCACCCGTGGGTGTCGTTACCCTCCTTGGA
GGCGTCGCCGAGTGTGTCGCCATCTCCCTCT-------------------------------------------------
---------------------------------------------------CTTGCTTGGTGTTGGCTATTATCTCCGGG
CGAAAGCCTTGATTAA-------GTGCTGGATCGGCACGATGGCGGCGTCCTCAACGCCGTTCCTCTGTTGAGAGCATCG
TGCCAGGGGACCTGGTCTTGATGTCCTATGTTGCGCTCCTCCGGTGTTTGCCGCTGCCCATGATCGTTCTTCTCCGGCGC
AATGAACGGTCGTTGCTGGTGATTCCAAGATGGCGCCTTTCTCAA-GTCAGATCAAGTCCTGCCATCCTCTTGCCACCTC
CTTTAGGCATTAAGGGGGGATGGTGCGTCGACAAGGGATGATTGGCGGAAGATGCTGCTCTTCGGTG-TGACCGACGTCG
G
>chr1B_2136
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-------------------GGAGGTGCGGGTCAGATCTAAATCCCCTTAGATTCGATTTGGGCCTTAGGGCTGATTTCAT
TGCGCGGCAGTCCCCTGGTGCG-GGTGAAGGCCGTCGTGGTGGATTTGGCTCTTGCACGGTGTGGTTGGCTGCTGCGGAT
CCTCATCTGGG-TGGATGGTGGCTGTTGGGTCGCGTTCTCTCGGCAGTGCGGGTGTGGGAGGACCTCGGCTGCGCGGCTT
CAACGGCAAGTTGCTGCGGTGACAGCGGTGCGAGGCTTCATGGACGGTACTGCCTAAACCTTGGAGGTGTGGAGATG-GT
GGCATTACGAATGAAAATCCTGCCAGGTTGTCACCAGGCCGGCGGCGATGGCACCCGTTGGTGTCGTTACCCTCCTTGGA
GGCGTCGCCGAGTGTGTCGCCATCTCCCTCT-------------------------------------------------
---------------------------------------------------CTTGCTTGGTGTTGACTATTATCTCCGGG
CGAAAGCCTTGATTCA-------GTGCTGGATCGGCACGATGGCGGCGTCCTCAACGCCGTTCCTCTGTTGAGAGCATCG
TGCTAGGGGACCTGGTCTTGATGTCCTATGTAGCGCTCCTCCGGTGTTTGCCGCTGCCCATGATCGTTCTTCTCCGGTGC
AATGAACGGTCGTTGCTGGTGATTCCAAGATGGCGCCTGTCTCAA-GTCAGATCGAGTCCTGCTATCCTCTTGCCACCTC
CTTTAGGCATTAAGGGGGGATGGTGCGTCAACAAGGGATGATTGGCAGAAGATGCTGCTCTTCGGTG-TGACCGACGTCG
G
>chr1B_2331
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----------------------------------------------------------GAGGACCTTGGCTGCACGGCTT
CGATGGCAAGTTGCTGCGGTGACAGCGGTGCGAGACTTCATGGTCGGTACTGCCTACACCT-GGAGGTGCGGAGATGCGT
GACATTACGGATGAAAATCCTGTCCGGTGGTGACCGAGCC-ACGGCGATGGCACGCGTGGGTGTCGCTTCCCTCCTTGGA
GGCATCACCGAGTGTGTCGCCATCTTCCTCA-------------------------------------------------
---------------------------------------------------CTCACTTGGTGTTGGCAATTGTCTTCGGG
CGAAAGCCTTGATCC-------GGTGCTGGATCGGCATGATGGCGGCGTCTTCAACGTCGTCCCTCTGTTGGGTGCATCG
TGCCAGGAGACATGCTTGTT------CATGTTGCGCTCCTTCGGTGTTTGCCGCTGCCCATAATCGCTC-TCTACGGCGC
TATGTACTGTCTTCAC-GGTGACTTCAAGATGGCGCCTCCCTCGG-GTCAGATCGAGTCCTGCCATCCTCTTGCCATCTC
CTTTAGGCATCAAGGAAGGATGGTGCGTCGACAAGAGATGCTTCACGGAAGTTGCTGCTCTTCGGTGGTGACCGATGTCG
G
>chr4A_2346
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-------------------------------------------------------------------------ACGGCTT
CGATGGCAAGTTGCTGCGGTGACGACGGTGCGAGTCATCTTGGTCGGCTCTGCCTATACCT-GGAGGTGCGGAGATGCGT
GGCATTACGGATGAAAGTCCTGTCCAGTTGTGGCCGGGCCGGCGGCGATGGCACCCGTGGGTGTCGTTTCCCTCCTTGGA
GGCGTCGCCGAGTGTGTCGCCATCTCCCTCG-------------------------------------------------
---------------------------------------------------CTCGCTTGGTGTTGGTAATTGTCTTCGGG
CGAAAGCCTTGATCT-------GGTGCTGGGTCGGCACGATGGCGGCGTCTTCAATGTCGTCCCTCTGTTGGGTGCATCG
TGCTAGGAGACATGGTCTGGTTGTCCCTTGTGGCGCTCCCCCGGTGTTCGCCGCTGCCCATAATCGCTC-ACTTCGGCGC
TATGCACAATCCTCAC-GGTGATTTCAAGACGGCGTCTTCCTCGG-GTCAGATCGGGTCCTGCCATCCTCTTGCCATCTC
C--TAGGCATCAAGAGAGGATGGTGCGTCGATAAGAGATGCTTGGTGGAAGTTGCTGCTCTTCGGTGGTGACCGTTGTCG
G
>SNPs
------------------------S-----------------S-------------------------------------
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--------------------------------------------------S---------------------------S-
----------S------------------------------S------------S--------------------S----
----------------------S--------------------------------------------S------------
--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S----------S----------
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--------------------------------------------------------S--------------------S-S
SSSSSSSS------------------------S-----------------------------------------------
-SS-----------------------------------------------------------------------------
--------------------S---------------------------------------------S-------------
--------------S----------------S-------------S----------------------------------
------S-------------S---------------S-------------------------------------------
-------SSSSSSSSSSSS--------------------------S----------------------------------
------------------S------------S-S---S------------------------------------------
-------------------S----------------------------S-------------------------------
--------------------------------------------------------------------------------
------S----------S--------------------------------------------------------------
---------S----------------------------------------------------------------------
----------------------------------------------------------------S---------------
--------------------------------------SSSSSSSS----------------------------------
-----------------------------------------S--------------------------------------
---SSSS-SSSSSSSSSSSS------------S-----------S-----------------------------------
SSSSSS------S-S-------S---------------------------------------------------------
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-------------------------------------------------------S------------------------
----------------------------------------------------------S---------------------
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S--------------SSSSSSS------------------------S---------S-----------------------
---------------------------------------------------------S-S------------S------S
--------------------------------S-----------------------------------------------
--------------------------S-----------------------------------------------------
-
>forward_583
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---AACACGACATGCAGTGGCTA---------------------------------------------------------
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-
>reverse_2163
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--AGATCGGATTTGGGGAGGGA----------------------------------------------------------
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-
