>input_sequence_66202
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------ATGAAGCTTGTGGTTGTGCTCTCGGCTCTGCTCCTGCTTTCCCTCGCGGCCGTCTCCTCGGCGGAAGAATTCGA
TTTCTTCTACCTTGTTCAGCAAGTGAGTAGCAATAG-----TACTGATCGATGATC---AATTTCCAATCTGTAGATCAC
ATCTTTGTACAGATGTCAGTATGCA------------TTGCAATGTTAAAC-TTGTCTGATTCCTTCCAATCTAACGAT-
---------GATCGTCGTCTTGTTTTTCTTTTGGACGAACGTATT-----GTGTTCCTAGTGGCCTGGGTCGTTCTGTGA
CACGAAGACAGGGTGCTGCTTCCCGGACACCGGCAAGCCGGCGACGGACTTCAGCATCCACGGGATGTGGCCCAACTACG
CCAAGTGCAAGACCCAAGGCGAGCTCGACGGCGTCATCGAGATGGTGACCAAGGGGAAGAAGAAGTGCTGGCCGGAGTTC
TGCAACAGCGAGCCCCTGCAGCTGTGGGAGATCAAGGACCTGGTGAAGGAGCTGGACGCCAACTGGCCGACGCTGGCGTG
CAAGGGCGGGAAGAGCATCGAGTTCTGGAGCCACGAGTGGGAGAAGCACGGCACCTGCTCCGACCTGGGCCAGCACGGCT
ACTTCGCGGCTGCGCTCGGGCTCAAGGCCCGTCACAACCTCACCGCCGTCCTCGCCGACACCGGGATCGTGCCGTCGGAC
AGCGAGACTTACTCCCTGAGTAGCATCAATGACGCCATCAAGGAAGGCACCGGATTCGCGGCGAAACTGGAGTGCAACCG
GGGCGTCGCCGGCGAGGTGCAGCTGTACCAGGTGTACCAGTGCGTCGACCGCTCAGGGGAGAACCTCATCGACTGCCCGG
TGCCGGTGCAGGGCAACTGCAAAAACAGGGTCCAGCTGCCGGCCTTCTGA------------------------------
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>chr2D_1_TraesCS2D01G163200
AAAAATATTTGGAAATTTGAAAACTTTTGCCTATTCTTTTT--TTCAAAAACTAAGAAATATTCATGAATTTT-------
----------AAAAATGTTTACCAATTTCAAAAAAGTTCGCAGATTTGAAAAATATTTGTGATTGTTCTAAAATTTTGCA
AATTTCAAAAATTGCTCACAGATTTCAAAAAATTTACAATTTTTTTAAATACATAAAACTGGATATTTTTGAAAAATTGT
TTAAGAATTTAAAAATCAATAATA----TTTTTTAATAAAATCCAAA---------AAAAACAGCTGCAAGATAACAAAA
TCAAAATAGGGTAGTGGAGCTAGATGTGCCAGCCCATTAAATCAGTCACTCAGCTGCAGTGGCCGACTTAAGCGTAGCGT
TACAGAGGGGAGTGTATGCTCGTGTATATTAGCGACTTCGATTGTACTGTGTTT-AAAAAAACTTAAGCGTCAAATATCA
TATTCCTAGATTACCTTTTGTTGGAAATATGTTAAAAACCTTTTTGTCCGAACTATAAGTGCATGCCAATAGTTTCTCAA
AAAAAAGTGCATGCCAATAATTGG--TCTTCTCCAACCCACAACATAACAAAGTGCCGCTGCCCCGTTGCAAGTTGCAAC
CTCGTGCTCCTTAGTCACGTCCGTTTTCTT-TCAAACTAGATGTCAGTTGCAGAAAACAACATGTCCCGACGAACATCAC
GTCGATCGCCGCTCCCTCCAATTGTGGGGAAGGAAGCGATCCAATGAACGATCGATTACGATGAAATTTCCTACTTATTT
TTTTTTGCAAAACGAGGCGGGCTCCTAATTAACTGACTACTGGATCAGGATTAGGCACCTACTACTTGCTTGTCCTATTT
GGACTCCGATTGCATCTACGCTAAACATTTTGCCTGTTGCATGAAGTTGTTACATCTCGTGCATATAGTATTAGAAAAGA
AGATATTGTTACATTAC---GTCGTGCTATAAGTAGCTGCGCGCTGGCTGCAACTACACATCAAAGTTGA-------TAG
GCGAAGATGAAGCTTGTGGTTGTGCTCTCGGCTCTGCTCCTGCTTTCCCTCGCGGCCGTCTCCTCGGCGGAAGAATTCGA
TTTCTTCTACCTTGTTCAGCAAGTGAGTAGCAATAG-----TACTGATCGATGATC---AATTTCCAATCTGTAGATCAC
ATCTTTGTACAGATGTCAGTATGCA------------TTGCAATGTTAAAC-TTGTCTGATTCCTTCCAATCTAACGAT-
---------GATCGTCGTCTTGTTTTTCTTTTGGACGAACGTATT-----GTGTTCCTAGTGGCCTGGGTCGTTCTGTGA
CACGAAGACAGGGTGCTGCTTCCCGGACACCGGCAAGCCGGCGACGGACTTCAGCATCCACGGGATGTGGCCCAACTACG
CCAAGTGCAAGACCCAAGGCGAGCTCGACGGCGTCATCGAGATGGTGACCAAGGGGAAGAAGAAGTGCTGGCCGGAGTTC
TGCAACAGCGAGCCCCTGCAGCTGTGGGAGATCAAGGACCTGGTGAAGGAGCTGGACGCCAACTGGCCGACGCTGGCGTG
CAAGGGCGGGAAGAGCATCGAGTTCTGGAGCCACGAGTGGGAGAAGCACGGCACCTGCTCCGACCTGGGCCAGCACGGCT
ACTTCGCGGCTGCGCTCGGGCTCAAGGCCCGTCACAACCTCACCGCCGTCCTCGCCGACACCGGGATCGTGCCGTCGGAC
AGCGAGACTTACTCCCTGAGTAGCATCAATGACGCCATCAAGGAAGGCACCGGATTCGCGGCGAAACTGGAGTGCAACCG
GGGCGTCGCCGGCGAGGTGCAGCTGTACCAGGTGTACCAGTGCGTCGACCGCTCAGGGGAGAACCTCATCGACTGCCCGG
TGCCGGTGCAGGGCAACTGCAAAAACAGGGTCCAGCTGCCGGCCTTCTGATTAAG--TTGAATTCTAGTTCAGAGTTTTA
TCCATTTACCTTACCACCCTCTTATTCGCAAAAAAAAAATTTACCTTACCACCCTCTAATCCAAACACCTCTTTTGTGTT
TGTTATTGGTTCAGTTTTTCTTTTTCTTTTGGGGAGTGTTATTGGTTCAGTTTAATCGCATCCAATCCTGAGTTCTGGAC
ATCGATGAAAGAAAAAATAAAACAGCCGCACAAATCTTCGTGTAAATCAATGTCATATAATTTTCATGTGCATAATTAAG
GTATATCCAGATGTGCTTTAAGACTGCTCACAATGGGGAGTAACATAGAGTAGTAACTTGCCGATGTTACTAGTCTATGT
TAGAGCAACTCTAGCAGACCCCGCATCCGCCTCCGACCCGCAAAATAACCGCCAAAATGCGGGTGCGGGCTGGAAAGCCT
GCCCGACCAGACCACGCATCCCGCCCCGGCCCGCAAAAAATTTTAGGGGGCGCGGCAAATTTCCGGCCTCAACCCGGGAA
AACGCGGGTTTCCCCCTCGCGGCTGCGGTGCCCTGCATCACAGAGAAGCAGTTGGCGGGAGGGACATTTCAGCCCGCGCT
CTTTTCCCCTTTCCTTCCGCCG----------------CCGCCCGCCCGCCGCCGGCGATTCCGGCCATATCTGCGGGCG
GAATCGCTCCGCGGGGCCGCCCCACACCCTCCCGCGCCGAGCCGCTGCACCGCCCCTCCGGATCCGGCGAGAAGAGCCG-
CCCCCCAGTCGCCGCCGCCGCTGGGATCGACCACCGCCGAGCGCACCGCCAGTTAGTCCC-CTTTTTATGATTTTCGCGA
GCTGTGTAGTAGATTGACGCGCCGGCGTGCGTGTAGATGGAGTTGACCCCGTGCGAGAAGTTCTTGCTATCCGATTCGTC
CGATTCGGACGACTCGGATGTGGAGACCATGCTTGCGAACTTTCGGCAGCAAACATTGGTCATGGCGCTTGACGTGAAGG
AGCATGAAGACGAGTACCGAAAGAGGAGGC
>chr2A_1
AAAAATATTCAGAAATTTG-AAACTTTTGCCTATTCTTTTTATTTCAAAAACTGAGAAATATTCATGAATTTGAAAATTC
TCATAATTAAAAAAATGTTTACCAATTTCTGAAAAGTTCACAGATTTGAAAAATATTTGTGATCCTTCTAAAAAG-TGCA
AATTTCAAAAATTGCTCACAGATTTCAAAATTTTTTAAAAAATTGTAAATACATAAAACTGGATATTTTTGAAATTTTGT
TTAAGAATTTAAAAATCAACAGTATCACTTTTTTAATAAAATTTAGAAAAATAAATAAAAACAGCTGCAAGATCACAAAA
TCAGAATAGAGTGGTGGAGCTAGATGGGCCAGCCCATTAAATCAGTCACTCAGCTGGAGTGGCCGACTTATGCGTAGTGT
TACAGAGGTGTGTGTATGCTTGTGTATGTGAGCGACTTTGATTATACCGTGTTTAAAAAAAACTTAAACGTCAAATAGCA
TATTCCAAGATTACCTTTTGTCGGAAATATGTTTAAAACCTTTTTGTCCGAAC--TAAGTGCATGCCAATAGTTTCT-AA
AAAAAAGTGCATGCCAATAATTGGGGTCTTCTCCAACCCACAACATAACAAAGTGCCACTGCTCCGTTGCAAGTTGCAAC
CTCGTGCTCCTTACTCACGTCCATTTTCTTCTCAAACTAGATGTCAGTTACA----------------------------
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>chr2D_930
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-----TTGTTACATTAC---GTCGTCCTATAAGTAGCTGCGCGATAGCTGCGGCTACACATCTC-----A-------TAG
TTGAAGATGAAGCTTGTCGTTGTGCTCTCGGCCCTGCTCCTGCTTTCTCTCGTCGCCGTCTCATCCGCCGAGGAATTCGA
TTTCTTCTACCTTGTTCAGCAAGTGAGTAATACCACTACCA----AATCGATGATG---GTTTTACGATCTGTAGATCTA
TTCTT-------------GTACAGA------------TTGCAAAGTTAGGG-TTACCTGATTCCTCCCAG-AAAAGCGGT
GAGTCTAACGATCGGCATCTTGTTTTTTGG--------GCGTACT-----TACTTTCTAGTGGCCAGGGTCCTTCTGTGA
CACGAAGAAGGGGTGCTGCTTCCCGGACACCGGCAAGCCGGCGACGGACTTCGGCATCCACGGGCTATGGCCCAACTACG
CCAAGTGCAAGACCCGCGGCGAGCTCGACGGCGCCCTGGAGATGGTGACCAAGCGCAAGAAGAAGTGCTGGCCGGAGAAC
TGCAACAGCGAGCGCCTCAAGCTCTGGGAGATCAAGGACCTGGTGACGGAGCTGGACGCCAACTGGCCGACGCTAGCGTG
CAAGGGCGGCAAGAGCATCGAGTTCTGGACCCACGAGTGGGAGAAGCACGGCACCTGCTCCAACCTGGACCAGCACGGCT
ACTTCGCGACGGCGCTCGGCTTCAAGGCCCGCCACAACCTCACCGGCATCCTCGCCGACGCCGGGATCGTGCCGTCGGAC
AGTGAGACCTACTTCCTCAGCAGCATCAGGGACGCCATCAAGCAGGGGACCGGGTTCACGGCGAACCTGGAGTGCAACCG
CGGCGTCGCCGGCGAGACGCAGCTGTTCCAGGTGTACCAGTGCATCGACCGCGCCGGGGAGAACCTCATCGACTGCCCGC
TGCCGATGCAGGGCAACTGCAAAGACAGGGTCCAGCTGCCGGCCTTCTGATTAA--------------------------
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>chr2A_930
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-----TTGTTACCTTAC---GTCGTCCTATAAGTAGCTGCGCGATAGCTGCGGCTACACATCTC-----A-------TAG
TTGAAGATGAAGCTTGTCGTTGTGCTCTCGGCCCTGCTACTGCTTTCTCTCCTCGCCGTCTCCTCCGCCGAGGAATTCGA
TTTCTTCTACCTTGTTCAGCAAGTGAGTAATACCACTACTA----AATCGATGATGATGATTTTACGATCTGTAGATCCA
TTCTT-------------GTACAGA------------TTTCAAAGTTAGGG-TTACCTGATTCCTCCCAG-AAAAGCGGC
GAGTCTAACGACCGGCATCTTGTTTTTTGG--------ACGTACGTACTGTACTTTCTAGTGGCCTGGGTCCTTCTGTGA
CACGAAGAAGGGGTGCTGCTTCCCGGACACCGGCAAGCCGGCGACGGACTTCGGCATCCACGGGCTGTGGCCCAACTACG
CCAAGTGCAAGACCCGCGGCGAGCTCGACGGCGCCCTGGAGATGGTGACCAAGCGCAAGAAGAAGTGCTGGCCGGAGAAC
TGCAACAGCGAGCGCCTCAAGCTCTGGGAGATCAAGGACCTGGTGACGGAGCTGGACGCCAACTGGCCGACGCTGGCGTG
CAAGGGCGGCAAGAGCATCGAGTTCTGGACCCACGAGTGGGAGAAGCACGGCACCTGCTCCAACCTGGACCAGCACGGCT
ACTTCGCGACGGCGCTCGGCTTCAAGGCCCGCCACAACCTCACCGGCATCCTCGCCGACGCCGGGATCGTGCCGTCGGAC
AGCGAGACCTACTTCCTCAGCAGCATCAGGGACGCCATCAAGGAGGGGACCGGGTTCACGGCGAACCTCGAGTGCAACCG
CGGCGTCGCCGGCGAGACGCAGCTGTTCCAGGTGTACCAGTGCATCGACAGCGCCGGGGAGAACCTCATCGACTGCCCGC
TGCCGATGCAGGGCAACTGCAAAGACAGGGTCCAGCTGCCGGCCTTCTGATTAAATTTTGAATTCT--------------
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>chr2B_930
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-----TTGTTACATAACGTCGTCGTGCTATAAGTAGCTGCGCGATAGCTGCGGCTACACATCTC-----AAAGTTAATAT
GCGAAGATGAAGC---TCGTTGTGCTGTCAGCCCTGCTCCTGCTTTCTCTCGTCGCCGTCTCCTCCGCCGAGGAATTCGA
TTTCTTCTACCTTGTTCAGCAAGTGAGTAACACTACTACCA----AATCGA---TGATGATTTTACGATCTGTAGATCTA
TTCTT-------------GTACAGA------------TTGCAAAGTTAGGG-TTACCTGATTCCTCCCAG-AAAAGCGGC
GAGTCTAACGATCGGCATCTTGTTTTTCGG--------ACGTACGTAC-----TTTCTAGTGGCCAGGGTCCTTCTGTGA
CACGAAGAAGGGGTGCTGCTTCCCGGACACCGGCAAGCCGGCGACGGACTTCGGCATCCACGGGCTGTGGCCCAACTACG
CCAAGTGCAAGACCCGCGGCGAGCTCGACGGCGCCCTGGAGATGGTGACCAAGCGCAAGAAGAAGTGCTGGCCGGAGAAC
TGCAACAGCGAGCCCCTCAAGCTCTGGGAGATCAAGGACCTGGTGACGGAGCTGGACGCCAACTGGCCGACGCTGGCGTG
CAAGAGCGGGAAGAGCATCGAGTTCTGGACCCACGAGTGGGAGAAGCACGGCACCTGCTCCAACCTGGACCAGCACGGCT
ACTTCAAGACGGCGCTCGGCTTCAAGGCCCACCACAACCTCACCGGCATCCTCGCCGACGCCGGGATCGTGCCGTCGGAC
AGCGAGACCTACTTCCTCAGCAGCATCAGGGACGCCATCAAGGAGGGGACCGGGTTCACGGCGAACCTGGAGTGCAACCG
GGGCGTCGCCGGCGAGACGCAGCTGTTCCAGGTGTACCAGTGCATCGACCGCGCCGGGAAGAACCTCATCGACTGTCCGC
TGCCGATGCAGGGCAACTGCAAAGACAGGGTCCAGCTGCCGGCCTTCTGATTAAATTTGAGTTCTAATT-----------
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>chr2A_1013
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------------------GTTGCGCTCTCGGCTCTGCTCCTGCTTTCTCTCGCGGCTGTCTCCTCGGCGGAATAATTCGA
TTTCTTCTACCTTGTTCAGCAAGTGAGTATCAATAATGCTATACTAATCGA---TGAGCAATTTCCAATCTGTAGATTGC
ATCTT-------------GTTCAGATGTTGGTATGCGTTGCAATGTTAAAATTTGTGCGATTCCTTCCAAAAAAAGCGAT
GAATCTAACGATGGTCATCTTGTTTTT-----GGACGTGCGAAAT-----TTGTTTCAAGTGGCCGGGGTCGTTCTGTGA
CACGAAGAAGGGGTGCTGCTTCCCGGATGCTGGCAAGCCGGCGACGGACTTCAGCATCCACGGGCTCTGGCCCAACTACG
CCAAGTGCAAGACCCAAGGCGAGCTCAACGGCGTCATCGAGATGGTGACCAAGGGGAAGAAGAAGTGCTGGCCGGAGTTC
TGCAACAGCGAGCCCCTGCAGCTGTGGGAGATCAAGGACCTGGTGAAGGAGCTGGACGCCAACTGGCCGACGTTGGCGTG
CAAGGGCGGGAAGAGCATCGAGTTCTGGACCCACGAGTGGGAGAAGCACGGCACCTGCTCCGGCCTGGGCCAGCACGGCT
ACTTCACGGCGGCGCTCGGGCTCAAGGCCCGTCACAACCTCACCACCATCCTCGCCGAAGCTGGGATCGTGCCGTCGGAC
GACAAGACTTACTTCCTGAGTAGCATCAGTGACACCATCAAGGAAGGCAC------------------------------
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>chr5D_2235
GTA-----------------------------------------------------------------------------
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-AGAGCAACTCTAGCAGACCCCGCATCCGCCCC-GACCCGCAAAATAACCATCAAAATGCGGGTGCGGGCCGGAAAGCCT
GCCCGACCAGACCCCGCATCCCGCCCCGGCCCGCAAAAAAATTTAGGGGGCGCGGCAAATTTCCAGCCTCAACCTGGGAA
AACGCGGGTTTCCCCCTCGCGGCTGCGGTGCCCTGCATCACAGAGAAGCAGTTGGCGGGAGGGACATTTCAGCCCGCGCT
CTTTTTCCCTT-CCTTCCGCCG----------------CCGCCCGCCCGCCGCCGGCGATTCCGGCCATATCTGCGGACG
GAATCGCTCCGCGGGGCCGCCCCACACCCTCCCGCGCCGAGCCGCTGCACCGCCCCTCCGGATCCGGCGAGAAGAGCCG-
CCCC-CAGTCGCCGCCGCCGCTGGGATCGACCACCGCCGAGCGCACCACCGGTTAGTCCC-CTTTTTATGATTTTCGCGA
GCTGTGTAGTAGATTGATGCGCCGGCGTGCGTGTAGATGGAGTTGACCCCGTGCGAGAAGTTCTTACTATCCGATTCGTC
CGATTCGGACGACTCGGATGTGGAGACCATGCTTGCGAACTTTCGGCAGCAAACATTGGTCATGGCGCTTGCCGTGAAGG
AGCATGAAGATGAGTACCGAAAGAGGAGGC
>chr1D_2235
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------------------------------------------------------------------------------GT
TAGAGCAACTCTAGCAGACCCCGCATCCGCCCCCGACCTGCAAAATAACCGCCAAAATGCGGGTGCGGGCCGGAAAGCCT
GCCCGACCAGACCCCGCATCCCGCCCCGGCCCGCAAAAAATTTTAGGGGGCGCGGCAAATTTCCGGCCTCAACCCGGGAA
AACGCGGGTTTCCCCCTCGCGGCTGCGGTGCCCTGCATCACAGAGAAGCAGTTGGCGGGAGGGACATTTCAGCCCGCGCT
CTTTTCCCCCTTCCTTCCGCCGCCGCCCGCCCTTGCTTCCGCCCGCCCGCCGCCGGCGATTCCGGCCATATCTGCGGGCG
GAATCGCTCCGCGGGGCTGCCCCACACCCTCCCGCGCCGAGCCGCTGCACCGCCCCTCCGGATCCGGCGAGAAGAGCCG-
CCCCTCAGTCGCCGCCGCCGCTGGGATCGACCACCGCCGAGCGCACCACCGGTTAGTCCC-CTTTTTATGATTTTCGCGA
GCTGTGTAGTAGATTGACGCGCCGGCGTGTGTGTAGATGGAGTTGACCCCGTGCGAGAAGTTCTTGCTATCCGATTCGTC
CGATTCGGACGACTCGGATGTGGAGACCATGCTTGCGAACTTTCGGCAGCAAACATTGGTCATGGCGCTTGCCGTGAAGG
AGCATGAAGACGAGTACCGAAAGAGGGGGC
>chr6D_2235
GTTAAG--------------------------------------------------------------------------
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---AGCAATTCTAGCAGAGCCCGCATCCGTCCCGGACCCGCAAAATAACCGCCAAAATGCGGGTGCGGGCCAGAAAGCCT
GCCGGACCAGACCCCGCATCCCACCCCGGCCCGCAAAAAATTTTAGGGGGCGCGGCAAATTTCCGGCCCCAACCCGGGAA
AATGCGGGTTTTCCCCTCGCGGCTGCGGTGCCCTGCATCACAGAGAAGCAGTTGGCGGGAGGGATATTTCAGCCCGCGCT
CTTTTCCCCCTTCCTTCCGCCGCCGCCCGCCCTTGCTTCCGCCCGCCCGCCGCCGGCGATTCCGGCCATATCTGCGGGCG
GAATCGCTCCGCGGGGCCGCCCCACACCCTCCCGCGCCGAGCCGCTGCACCGCCCCTCCGGATCCGGCGAGAAGAGCCG-
CCCC-CAGTCGCCGCCGCTGCTAGTATCGACCACCGCCGAGCGCACCACCGGTTAGTCCC-CTTTTTGTGATTTTCGCGA
GCTGTGTAGTAGATTGACGCGCCGGCGTGCGTGTAGATGGAGTTGACCCCGTGCGAGAAGTTCTTGCTATCCGATTCGTC
CGATTCAGACGACTCGGGTGTGGAGACCATGCTTGCGAACTTTCGGCAGCAAACATTGGTCATGGCGCTTGCCGTGAAGG
AGCATGAAGACGAGTACCGAAAGAGGAGGC
>chr1D_2236
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-------------------------------------------------------------------------------T
TAGAGCAACTCTAGCAGACTCCGCATCCGCTCCCTACCCGCAAAATAACTGCCAAAATGCGGGTGCGGACCGGAAAGCTT
GCCCGACCAGACCCCGCATCCCGCCCCGGCCCGCAAAAAATTTTAGGGGGCGCGGCAAATTTCCGGCCTCACCCCGGGAA
AACGCGGGTTTCCCCTTTGCGGCTGCGGTGCCCTGCATCACAGAGAAGCAGTTGGCGGGAGGGACATTTCAGCCCGCGTT
CTTTTCTCCCTTCCTTCCGCCGCCGCCCGCCCTTGCTTCCGCCCGCCCGCCGCCGGCGATTCCGGCCATATCCGCGGGCG
GAATCGCTCCGCGGGGTCGCCCCACACCCTCCCGCACCGAGCCGCTGCACCGCCCCTCCGGATCCGGCGAGAAGAGCCGC
CCCC-CAGTCGCCGCCGCCGCCGGGAGCGACCACCGCCGAGCGCACCACCGGTTAGTCCC-CTTTTTATGATTTTCGCGA
GCTGTGTAGTAGATTGACGCGCCGGCGTGCGTGTAGATGGAGTTGACCCCGTGCGAGAAGTTCTTGCTATCCGATTCATC
CGATTCGGACGACTCGGATGTGGAGACCATGCTTGCGAACTTTCGGCAGCAAACATTGGTCATGGCGCTTGCCGTGAAGG
AGCATGAAGACGAGTACCGAAAGAGGAGGC
>chr7D_2238
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-AGAGCAACTCTAGCAGACCCCACATCCGCCCCCGGCCCGCAAAATAACCGCCAAAATGCGGGTGCGGGCCGGAAAGCCT
GCCCGACCAGACCCCGCATCCCGCCCCGGCCCGCAAAAAAATTTAGGGGGCGCGGCAAATTTCCGGCCCCAACACGGGAA
AACGCGGGTTTCCCCCTCGCGGCTGCGGTGCCCTGCATCACAGAGAAGCAGTTGGCGGGAGGGACATTTCAGCCCGCGCT
CTTTTCCCCCTTCCTTCCGCCGCCGCCCGCCCTTGCTTCCGCCCGCCCGCCGCCGGCGATTCCGGCCATATCTGCGGGCG
GAATCGCTCCGCGGGGCCGCCCCACACCCTCCCGCGCCGAGCCACTGCACCGCCCCTCCGGATCCGGCGAGAAGAGCCG-
GCCC-CAGTCACCGCCGCCGCTGGGATCGACCATCGCCGAGCGCACCACCGGTTAGTCCCCCTTTTTATGATTTTCGCGA
GCTGTGTAGTAGATTGACGCGCCGGCGTGCGTGTAGATGGAGTTGACCCCGTGCGAGAAGTTCTTGCTATCCGATTTGTC
CGATTCGGACGACTCGGATGTGGAGACCATGCTTGCGAACTTTCGGCAGCAAACATTGGTCATGGCGCTTGCCGTGAAGG
AGCATGAAGACGAGTACCGAAAGAGGAGGC
>chr3A_2238
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-AGAGCAACTCTAGCAAACATCGCATCCGTCCCTGACCCGCAAAATAATCGCCAAAATGCAGGTGTGAGCCGGAAAGTCT
GCCCGACCAGACCCCGCATCCCGTCCCAGCCCGCAAAAAATTTTAGGGGGCGCGGCAAATTTCCGGCCTCAACCCGGGAA
AACGCGGATTTCCCCCTCGCGGCTACGGTGCCCTGCATCACAGAGAAGCAGTTGGCGGGAGGGACATTTCAACCCGCTCT
CTTTTCCCCCTTCCTTCCGCCGCCGCCCGCCCA----------------CCGCCGGTGATTCCGGCCATATCTGCGGGCG
GAATCGCTCCGCGGGGTCGCCACACACCCTCCCGCGCCGAGCCGCTGCATCACCCCTCCGGATCCGGCGAGAAGAGCCGC
CCCC-CAGTCGCCGCCGCCGCTGGGATCGACCACCGCTGAGCGCACCACCGGTTAGTCCC-CTTTTTATGATTTTCGCGA
GCTGTGTAGTAGATTGACGCGCCAGCGTGCGTGTAGATGGAGTTGACCCCGTGCGAGAAGTTCTTGCTATCTGATTCGTC
CGATTCGGACGACTCGGATGTGGAGACCATGCTTGCGAACTTTCGGCAGCAAACATTGGTCATGGCGCTTGCCGTGAAGG
AGCATGAAGACGAGTACTGAAAGAGGAGGC
>chrUn_2238
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-AGAGCAACTCTAGCAGACCCCGCATCCGCCCCCGACCCGCAAAATAACCGCCAAAATGCGGGTGCGGGCCGGAAAGCCT
GCCCGACCAGACCGCGCATCCCGCCCCGGCCCGCAAAAAATTTTAGGGGGCGCGGCAAATTTTCGGCCCCAACCCGGGAA
AACGCGGGTTTCCCCGTCGCGACTGCGGTGCCCTGCATCACAGAGAAGCAGTTGGCGGGAGGGACATTTCAGCCCGCGCT
CTTTTCCCCCTTCCTTCCGCCGCCGCCCGCCCTTGCTTCCGCCCGCCCGCCGCCGGCGATTCCGGCCATATCTGCGGGAG
GAATCGCTCCGCGGGGTCGCCCCACACCCTCCCGCTCCGAGCCGCTACACCGCCCCTCCGGATCCGGCGAGAAGAGCCGC
CCCT--AGTCGCCGCCGCCACTGGGATCGACCATCGCCGAGCGCACCACCGGTTAGTCCC-CTTTTTATGATTTTTGCGA
GCTGTGTAGTAGATTGACGCGCCGGCGTGCGTGTAGATGGAGTTGACCCCGTGCGAGAAGTTCTTGCTATCCGATTCGTC
CGATTCGGACGACTCGGATGTGGAGACCATGCTTGCGAACTTTCGGCAACAAACATTGGTCATGGCGCTTGCCGTGAAGG
AGCATGAAGACGAGTACCGAAACAGGAGGC
>chr7A_2238
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-AGAGCAACTCTAGCAGACCCCGCATCCGCCCCCGACCCGTAAAATAACCGCCAAAATGCGGGTGCGGGCCGGAAATCCC
GCCCGACCAGACCCGGCATCCCGCCCCGGCCCGCAAAAAAATTTAGGGGGCGCGGCAAATTTCCGGCCCCAACCCGGGAA
AACGCGGGTTTCCCCCTCGCGGTTGCGGTGCCCTACATCATAGAGAAGCAGTTGGCGGGAGGGACATTTCAGCCCACGCT
CTTTTTTCCCTTCCTTCCGCCGCCGCCCGCCCTTGCTTCCGCCCGCCCGCCGCCGGCGATTCCGGCCATATCCGCGGGCG
GAATCGCTCTGCGGGGCCGCCCCACACCCTCCCGTGCCGAGCCGCTGCACCACCCCTCCGGATCCGGCGAGAAGAGCCGC
CCCC--AGTCGCTGCCGCCGCTGGGATCGACCACCGCCGAGCGCACCACCGGTTAGTCCC-CTTTTTATGATTTTCGCGA
GCTGTGTAGTAGATTGACGCGC-----TGCGTTTAGATGGAGTTGACCCCGTGCAAGAAGTTCTTGCTATCCGATTCGTC
CGATTCGGACGACTCGGATGTGGAGACCATGCTTGCGAACTTTCGGCAGCAAACATTAGTCATGGCGCTTGCCGTGAAGG
AGCATGAAGACGAGTACCGAAAGAGGAGG-
>chr5D_2240
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---AGCAACTCTAGCAGACCCCGCATCTGCCCCCGACCCGCAAAATAACCGCCAAAATGCGGGTGCGGGCCGAAAAGCCT
GCCGGACCAGACCCCGCATCCCGCCCCGGCCCGCAAAAAATTTTAGGGGGCGCGGCAAATTTCCGGCCCCAACCCGGGAA
AACGCGGGTTTCCCCCTCGCGGCTGCGGTGCCCTGCATCACAGAGAAGCAGTTGGCGGGAGGGACATTTCAGCCCGCACT
CTTTTCCCCCTTCCTTCCGCCGCCGCCCGCCTTTGCTTCCGCCCGCCTGCCGCCGGCGATTCCGGCCATATCTGCGGGTG
GAATCGCTCCGCGGGGCCGCCCCACACCCTCCCGCGCCGAGCCGCTGCGCCGCCCCTCCGGATCCGGCGAGAAGAGCCGC
CCCC--AGTCGCCGCCGCCGCTGGGATCAACCATCGCCGAGCGCACCACCGGTTAGTCCC-CTTTTTATGATTTTCGCGA
ACTGTGTAGTAGATTGACGCGCCGGCGTGCGTGTAGATGGAGTTGACCCCGTGCGAGAAGTTCTTGCTATCCGATTCGTC
CGATTCGGACGACTCGGATGTGGAGACCATGCTTGCGAATTTTCAGCAGCAAACATTGATCATGGCGCTTGCCGTGAAGG
AGCATGAAGACGAGTACCGAAAGAGGAGG-
>SNPs
---------SS--------S---------------------------------S------------------S-------
-----------------------------SS--------S-----------------------SS--------SSS----
------------------------------SS---SS--SSS--S-----------------------------SS----
-------------------S-S--------------------SS-S---------------------------S------
---S-----S--S-------------S-----------------------------S-------------S------S--
--------S-S---------S------S-S--------S----S---S-------------------S---------S--
------S--------------S-----------S-------------------SS----------------------S--
---------------------------------------------------------S----S-----------------
-------------S--------S--------------------------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSS--------------------------------------S-S-----SS---------SSSSSSS-----------
-----------------S-----------------------------S--------------------------------
-----------------------------S-----S---------S---------S----------------------S-
-----SSSSSSSSSSSSS---SSS--------------------------S-------------------SSS--SSSS-
----------------S-----------SSSS-----S-----S------S----S------------------------
--------SS------------------------------------------------------S---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------S--------------------------------------------------
----------S------------------------------------S-----------S--------------------
-------------S--------------S------------------------S---S-------S--------------
----------------SS--------S----------------S--------S-S------------------------S
-----S-----------------S------------------------------S------------S-SSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--
-------------------------------S--------------------------------------S---------
-------------S------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S------------------------------------------S--S-----------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S--------
------------------------------
>forward_761
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------TTGTGGGGAAGGAAGCGATC---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
>reverse_2181
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------AACAGCCGCACAAATCTTCG----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
