>input_sequence_66188
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------------------------------------------------------------------------------AT
GGCTACTAGCACCAAGCTTGTAGCTCTTGGCTTTGTTGTCCTTGTGAGCATTGGGTTTGCTGATGCTGCAAGGATGCTCG
CTAGCTCCTCCAGTGCTTCAGGTGGTGGA---GGTGGCGGGGGAGGTGGAGGCGGTGGCGGTGGGTCTGGTGGGAGTGGA
TGGGGTGGAGGGTCTGGATCAGGTGGGGGCTCAGGATATAGTGAAAGCGGTGGGGATTGGGGTAACAAGTGGAACTTCGC
CAGGGGAGCTGGTGGAGGAGGAGGAGCTGGGGGTGGCGGAGGATCAAATGGTGGATACGGGTCTGGCTTCGGATCCGGAT
ACGGCACCGGCAGCAGTGCGAGTGGCTCCGCGTCAGCCCCTAGTGGCAATGGATATGCTAATGCTGATGGTAAGGGTGGG
GGTGGAGGTGGAGGTGGAGGTGCAGATGGGTCTACCGGATCCGGAGCTGGCTCTGGCCTTGGCAAGGGATATGGTGAGAG
TGGCATATCAAAGGCGCCTGCTCCTGCTACTGGTGGTGATGGTACCAGCTACTCTAATGCTGGCGGTAGTGGTAACGGTG
GTGGTGGCGGTAACAATGGGAATGGAGGTGGTGCCGGTGCTGGTGCAGGACAGGCCGGCAACAATGACACTTCTGGGGGC
TTTGCGAATGGAGGAGGAAGCGGCAATGGTGGTGGCGCAGCTGGAGGCGGCGCCGAAGGTCCAAGCGTTGGCGTCGGGTC
TGGCGCCGGGTCTGGCGCGGGACAAACCGGTAGTACTGGCTCAAATGGCACAGGTTATGCCACCGGAATGGGTGGCGGCA
TGGGTGGCGGCAATGGTGGTAGCACTAATGGAGGAACCGGTAGCGGTGGAGGCAGTGGATCCGGATCGGGGGGTGGCGGG
TACAACTAA-----------------------------------------------------------------------
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-------------------------------------------------------------------------------
>chr1B_1_TraesCS1B01G161600
TCGTCGATAGGCTACGTGATAATATTTTTCTTTCTTATTTCTTTTTTAGATGAAGGTAAGATATTTTTTGAGATGTTTTT
TAGATAGAGTTGAGGACCATATGGTTTTTTTAAAACGTGCGCACAAATTCCTTTTAAGCGGTGTCACATGGTGGCGCCCC
AACCATTAATTATCTTAACTCGGCGAGCAGACAGTAGATATAGCTGTGAAGGATGAAACGGCGCTAGCAGCTAAGCTGGC
TAGCTCGATCATGCTTCCGAATTGCACCGACGAAGATTCGAAGGGCTAGCATGTACTCGAGTCTTTTTACTCCGTGTATA
GATTTTTGTCAAATTAAATTTATCTTAAAAAATATCAATATCTACAATACCAAATATATATATATACAATGAAGTAAAGA
TACCTTAACTTTGAACAAAATTTATATGCGGACTAAAAGAACCAGAGAAAGTAATAGTACTCCCTCCTTTCGGAATTACT
TGTCTCGGAAATGAATGTATTTAGAACTAAAATACATCTAGATACATCCATTTCTGCGACAACTAATTCCGAACGGAGGG
AGTAGTAGCTAGCGCATTCGCACCGGTGATACACGATCGA----TGTAAGAGTAAGATGATCTCGGGCATTCATTAACCA
AATC-ACTTACGCGTTCTTTCATGT-TAGGGCATCAAAGAGATATAATTAATCTGTCCATGTCAGGCGATGGGAA--TCT
CTTGCTAATCAACTAGGCCTTCGCTTCCATGCCAGTTGATCTGCATCAATAAATTACT-GACTGGTGTACATGCTGTCTG
CGGCTAGCTAG----ATCG--ATATACACAGTCAACAGTA-TACTACCACTCTGGTTATAGAAAACTTCTCATCGAATAA
CCCACTGAA--TACACAACCAGGAGCGCTC-----GATCGCCGTAAGATATCACACCCATGTACCA-----GCCCCAGCA
CTATATATATCT----ACCCACCCA-TCTCTGCTCAGCACCCAACTCT----TCTCACTCGACCGAG-CTCACTCACAAT
GGCTACTAGCACCAAGCTTGTAGCTCTTGGCTTTGTTGTCCTTGTGAGCATTGGGTTTGCTGATGCTGCAAGGATGCTCG
CTAGCTCCTCCAGTGCTTCAGGTGGTGGA---GGTGGCGGGGGAGGTGGAGGCGGTGGCGGTGGGTCTGGTGGGAGTGGA
TGGGGTGGAGGGTCTGGATCAGGTGGGGGCTCAGGATATAGTGAAAGCGGTGGGGATTGGGGTAACAAGTGGAACTTCGC
CAGGGGAGCTGGTGGAGGAGGAGGAGCTGGGGGTGGCGGAGGATCAAATGGTGGATACGGGTCTGGCTTCGGATCCGGAT
ACGGCACCGGCAGCAGTGCGAGTGGCTCCGCGTCAGCCCCTAGTGGCAATGGATATGCTAATGCTGATGGTAAGGGTGGG
GGTGGAGGTGGAGGTGGAGGTGCAGATGGGTCTACCGGATCCGGAGCTGGCTCTGGCCTTGGCAAGGGATATGGTGAGAG
TGGCATATCAAAGGCGCCTGCTCCTGCTACTGGTGGTGATGGTACCAGCTACTCTAATGCTGGCGGTAGTGGTAACGGTG
GTGGTGGCGGTAACAATGGGAATGGAGGTGGTGCCGGTGCTGGTGCAGGACAGGCCGGCAACAATGACACTTCTGGGGGC
TTTGCGAATGGAGGAGGAAGCGGCAATGGTGGTGGCGCAGCTGGAGGCGGCGCCGAAGGTCCAAGCGTTGGCGTCGGGTC
TGGCGCCGGGTCTGGCGCGGGACAAACCGGTAGTACTGGCTCAAATGGCACAGGTTATGCCACCGGAATGGGTGGCGGCA
TGGGTGGCGGCAATGGTGGTAGCACTAATGGAGGAACCGGTAGCGGTGGAGGCAGTGGATCCGGATCGGGGGGTGGCGGG
TACAACTAAATTACTCTTTG-TTGAGCAAGCTAGAG-CGGGAACTCAACATACATTTAATTTTTCATCATTTTATTAGTA
TTTT-GCGTCGAAGGAGACGTGATATGCACGAAAGGGATGGTCCTGGGCGTCACT--AGAGAAATAAATAGCACTTCTGA
GATTAGCTA--AGCTCATACTGTCGTCGCGACTGGC-TTGTGCCAATGGACATAAT--TAATGTGATGGAGTACCACCTT
TGTAGCA-ATTTCTATCTGA------AAATCACTTCATTCCTTTGTTTTGTTTCCAATGTCTTTTT--------ACACGT
TTTACATGTTCATGTGGGTTTCTTGT---AAAAAAAAGGTATGTATATCTTGTCCATACCCACAAGAGTATGCAACTCTG
CAG-TTTTTAGAGCTATGCAATCTTCGACCTTGCTTTTTATTTAAAATATCCCCTCGGTGTTAAATTGGCAAGATCATTT
CAGAATCCGTATT-AACAAAATATTTCCAATCTTAGCCATCAAGATAGAAGGTCGAGCAAATTGTGTGTAGGCTACTCAT
AGCGGAAGTATCATATACTAGTATCATGTGCATGATACTAGTGTATGATAGTATCATATACTAGTATCATGTGCATGATA
CTAGTGTATGATACTATCTTTATAATGCATAGTAGTATCATTGAATAGTATCATAAATGATCATATTTATTGTCATGCAT
GACACAAAGTAGCATAGCATTTAATATGATATGAAATCTACCTATGTTACTCTAATCCCTCTCTCTTCTTTAATTCTTTG
CCACATCGACGTGTTTGCTATTCCCGAGTGCATGATACCAGTTAAGACACCACCACTACGGTTAGTCATAGGATGCAGTT
GCATATGCGTGTTACATGCAATTTTAAACGGGTCGTGACGCATGCAGTTCCAGGTAAGATGGATGTGCAAGTGATCCATG
TTTTTTAGACGAACTACTACCCACAAAAGACGTGCTATTTTCGAGAAGAAATAATAATAATAATAGAGGGTACTACAAG
>chr1D_561
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AGTAGTAGCTAGCGCATTCGCACTGGTAATACACGATCGATGCATGTAAGAGTAAAATGATCTCAGGCATTCATTAAGCA
AATCAACTTACGCGTTCTTTCATGT-TAGGGCATCGAAGAGATATAATTAATCTGTCTATGTCAGGCGATGGGAA--TCT
CTTGCTAATCAACTAGGCCTTCGCTTCCATGCCAGTTGATCTGCATCAAT-AAATTACCGGCTGGTGTACATGCTGTCTG
CGG----CTAG----ATTGATATATACACAGTCAACGGTAATACTGCCACTCTGATTATAGAAAGCTTCTCATCGAATAA
CCCACTGAA--TTCACAACCAGGAGCGCTC-----GATGGCCGTAGGATATAGCACCCATGCAC-G-----GCCCCAGCA
CTATATATACCT----AACCCATTCCTCTCTGCTCAGCACCCAACTCG----TCTCACTCCACCAAG-CTCACTCACAAT
GGCTACTAGCACCAAGCTTGTAGCTCTTGGCTTTGTTGTCCTTGTGAGCATTGGGTTTGCCGATGCTGCAAGGATGCTCG
CTAGCTCCTCCAGTGCTTCAGGTGGTGGA---GGTGGCGGGGGAGGCGGAGGTGGTGGCGGTGGGTCTGGTGAGAGTGGA
TGGGGTGGAGGGTCTGGATCAGGTGGAGGCTCGGGATATAGTGAAAGCGGTGGGGATTGGGGTAACAAGTGGAACTTCGC
CAGGGGAGCTGGTGGAGGAGGAGGAGCTGGTGGTGGCGGAGGATCAAATGGTGGATACGGGTCTGGCTTTGGATCCGGCT
ATGGCACCGGCAGTGCTGTGAGTGGCTCCGCATCAGCCCCTAGTAGCAATGGATATGCCAATGCTGATGGTAAGGGTGGG
GGTGGGGGCGGAGGTGGCGGTGCAGATGGGTCAACCGGATCCGGAGCTGGCTCTGGCCTTGGCAAGGGATATGGTGAGAG
TGGCATATCAAAGGCACCCGCTCCTGCTGCTGGTGGTGATGGTACCAGCTACTCTGATGCTGGTGGTAGTGGTAACGGTG
GTGGTGGCGGTAACAATGGAAATGGAGGTGGTGCCGGTGCTGGTGCGGGACAGGCCGGCAATGATGACACTTCTGGGGGC
TTTGCGAATGGAGGAGGAAGCGGCAATGGTGGTGGCGCAACCGGAGGTGGCGCCGAAGGTCCAAGCGTTGGAGTTGGGTC
TGGCGTTGGGTCTGGCACGGGACAAACCGGTAGTACTGGCTCAAATGGCACAGGCTACGCCACCGGCATGGGTGGCGGCA
TGGGTGGCGGCAATGGTGGTAGCACTAATGGAGGAACCGGTAGCGGTGGAGGAAGTGGATCCGGATCTGGTGGGGGCGGT
TACCATTAAATTACACTTTTCTTGAGCAAGCTAGAA-CCGAATCTCAACATATATTTATATTTTTATCATTTTATTAGTA
TTTTTGCGTGAAAGGAGACATGGCATGCACGAAAGGGATGATCCTTGGTGTCACT--AGAGAAATAAATAGCACTTCTTA
GATTAGCCTTTAGCTCCTACTGCCGTCTAGACTAGC-TTGCGCCAATAGACATAATAGTAATGTGATGGAGTACCTCCTC
TGTAGCA-ATTTCTATCTGAATGGCCAAATCACCTTATCCCTTTATTTTGTTTCCATTGTCTTTTT--------ACACAT
TTTACGTGTTCAGGTGTGTTTCTCGT---AAAAAAAAAGGTATG-TATCTTGTCCATACCCACAAGAGTATGCAACTCTT
CAG-TTTTTAGAGCTATGCAATTTTTGACCTTGCTTTCTATTTAAAATATCCCCTCGGTGTTAAATTGGCAGGATCATTT
CAGAATCCATATTAACAAAAATATTTCCAATCTTAGCAAACAAGATAGAAGGTCGAGCAAATTGTGTGT-----------
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-------------------------------------------------------------------------------
>chr1A_638
ATCAAC--------------------------------------------------------------------------
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-------TTACGCGTTCTTTCATGTCTAGGGCATCGAAGAGATATAATTAATCTGTCTGTGTCAGGCGATGGAAATCTCT
CTTGCTAATCAACTAGGCCCTCTCTTCCATACTACTTCATCTGCATCAACAAAATAACCGACTGGTGTACATGCTGTCTG
CGG----CTAGCTAGATCG--ACATACACAGTCAACGGTA-TACTGACACTCTGGTTATAGAAAACTTCTCATCGAATAA
CCCACTGAA--TACACAACCAGGAGCGCTC-----GATCGCCGTAAGATATCGCACCCATACACGG-----GCCCCAGCA
CTATATATATCT----ACCCACCCA-TCTCTGCTCAGCACCCAACTCG----TCTCACTCCACCGAG-CTCACTCACAAT
GGCTACTAGTACCAA--------------GCTTTGTTGTCGATGTGAGCATTGGGTTTGCCGATGCTGCAAGGATGCTCG
CTAGCACCTCCAGTGCTTCGGGTGGTGGA---GGTGGCGGGGGAGGTGGAGGCGGTGGCGGTGGGTCTGGTGGGAGTGGA
TGGGGTGGAGGGTCTAGATCAGGTGGAGGCTCAGGATATAGTGAAAGCGGAGGGGATTGGGGTAACAAGTGGAACTTCGT
CAGGGGAGCTGGTGGAGGAGGAGGAGCTGGGGGTGGCGGAGGATCAAATGGTGGATACGGGTCTGGCTCTGGATCCGGAT
CCGGCACCGGCAGCGGTGCGAGTGGCTCCGCATCAGCTCCTAGTGGCAATGGATATGCCAATGCTGATGGTAAGGGTGGG
GGTGGGGGTGAAGGTGGCGGTGCAGATGGGTCTACCGGATCCGGAGCTGGCTTTGGCCTTGGCAAGGGATATGGTGAGAG
TGGCATATCAAAGGCACCCGCTCCTGCTGGTGGTGGTGATGGTACCAGCTACTCTGATGTTGGTGGTAGTGGTAACGGTG
GTGGTGGCGGTAACAATGGAAATGGTGGTGGTGCCGGTGCTGGTGCAGGACAGGCTGGCAACGATGATACTTCTGGGGGC
TTTGCGAATGGAGGAGGAAGCGGCAACGGTGGTGGCACAGCTGGAGGCGGCGCCGAAGGTCCAAGCGTTGGAGTCGGGTC
TGGCACTGGGTCTGGCGCGGGACAAACCGGTAGTACTGGCTCAAATGGCACAGGTTATGCCACCGGAATGGGTGGCGGCA
TGGGTGGTGGCAATGGTGGTAGCATTAATGGAGGAAGCGGTAGTGGTGGAGGCAGTGGATCCGGATCTGGAGGTGGCGGG
TACAACTAAATTACTCTTTG-TTGAGCAAGCTATAA-CGGGAACTCAACATATATTTATTTTTTCATCATTTTATTAGTA
TTT-TGCGTCGAAGGAGACGTGGCATGCACGAAAGGGATGATCCTGGGCGTCACT--AGAGAAATAAATAGCACTTCCTA
GATTAGCCTTTAGCTCCTACTGCCGTCGAGACTGGC-T-GTGCCAATAGACATAATAGTAATGTGATGGAGTACCTCCTT
TGTAGCA-ATTTCTATCTGAATGGCCAAATCACCTTATCCCTTTGTTTTGTTTCCAATGTCTTTTTT-------ACACAT
TTTACATGTTCAGGTGTGTTTCTTGGTAAAAAAAAAAGGTATGTATATCTTGTCCATACC-ACAAGAGTATGCAAC--TG
CAG-TTTTTAGAGCTATGCAATCTTCGACCTTGCTTTTTATTTAAAATATCCCCTCAGCGTTAAATTGGCAGGATTATTT
CAAAATCCATATTAAAAAAAATATTTCCAATCTTAGCCATCAAGATATAAGGTCGAGCAAATTGTGTGTAGG--------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>chr4A_799
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------CTAG----ATCGACATATACACAGTCAACAGTACTACCGTCACTCTGATCATAGGAAACTTCTCATCGAATAA
CCCATTCAA--TGCACAACCAAAATCACTCGATCGGTTCACCGTAAGATCTCGCACCCATGCACGG-----CCCCCAGCA
CTATATATACTGACCCAACCTTCTCTGCACT---CAGCACCCAACTCGACCATCTCACTCCACACAG-CTCACTCACAAT
GGCTACTAGCACCAGGCTTGCAGCTCTTGGCTTTGTTGTCCTTGTGAGCATTGGGTTCGCCGATGCAGCAAGGATGCTAG
CTAGCTCCTCCAGTGCTTCAGGTGGTGGT---GGAGGAGG---TGGTG---GGGGAGGTGGTGCGAATGGTGGGAGTGGA
TGGGGTGGAGGGTCTGGATCGGGTGGAGGCTTAGGATATAGTGAAAGCGGTGGAGATTGGGGTAACAAGTGGAATTTCGC
CAAGGGGTCTGGAGGAGGAGGAGGAGCAGGCGGTGGGGGAGGATCAAAGGGTGGATCCGGGTCTGGTTTCGGATCTGGTT
CTGGTAGAGGGAGTGGTGTGAGTGGCTCTGCATCAGCCCCTAGCGGCAATGGATACGCCAATGCTGATGGTAATGGCGGG
GGCGGGGGTAGTGGTGGGGGTGCAAATGGGTCTAGCGGAACTGGGGTTGGGTCTGGCCTTGGCAAGGGATATGGTGAGAG
TGGTGTGACAAAGGCACCGACTCCTGTTGCCGGTGGTGATGGTACCAGCTACTCAGATGCTGGTGGTAGTGGTAACGGGG
GTGGCGGCGGTAACAACGGAAATGGAGGTGGTGCCGGAGCTGGCGCTGGACAGGCCGGTAGCGACGCCACTTCTGGAGGC
TTTGCAAATGCAGGAGGAAGCGGCAATGGTGGTGGCGCAACCGGAAGTGTCGCTGAAGGTCCAAGCGTTGGAGTTGGATC
GGGTGCTGGGTCTGGCGCCGCTCAGACCGGTAGCACTGGCTCTTATGGCGAAGGCTATGCCACGGGAATGGGTGGTGGCA
TGGGTGGCGGCACCGGTGAGAGCCAGAATGGCGGAACTGGCAATGGTGGAGGCAATGGATCAGGATCTGGTGGTGGCGGA
TACCACTAAATTATCCTTTC-TCAATCAAGATAGAACTTGGACCTCGACATGTATTTTAATTTCCATCATTTTACTAGCA
TTAC-GAATTGAAGGACATGGGGCGTGCACTAAAGGGACGATCCTAAGCATAGGTGGAGGGAACTAAATAGCATTTCTTG
GATTAGCATTTAGCTCCTACAGCTGTTCAGGCCGGTTT-GTGCCAACAGACATAATAATAATGTGAAGGAGTACCTCCTT
TGTAGTTTTTTTCTATCTCAATAGTCAAATCACTTGATTTCGCCGTTTTGTTTCCAATGCCTTTTTGAGTTTTGACCCAA
TTTACATGTTCAAGTATGTTTCTTG-------------------------TGTGCATACCCACGAGAGTATGCAAGTCTG
TGGTTTTCTAGAGCTATGCAAACTCCGACTTTGCTTTCTATTTAAAATAACCCCTCG-TGTAAG-TTGG---GTTCGTTT
TTGAATCGGTATT-AACAAAATAGTTCCGATCTTAACCATCAACATAGAA------------------------------
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-------------------------------------------------------------------------------
>chr4A_799
--------------------------------------------------------------------------------
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-------CTAG----ATCGACATATACACAGTCAACAGTACTACCGTCACTCTGATCATAGGAAACTTCTCATCGAATAA
CCCATTCAA--TGCACAACCAAAATCACTCGATCGGTTCACCGTAAGATCTCGCACCCATGCACGG-----CCCCCAGCA
CTATATATACTGACCCAACCTTCTCTGCACT---CAGCACCCAACTCGACCATCTCACTCCACACAG-CTCACTCACAAT
GGCTACTAGCACCAGGCTTGCAGCTCTTGGCTTTGTTGTCCTTGTGAGCATTGGGTTCGCCGATGCAGCAAGGATGCTAG
CTAGCTCCTCCAGTGCTTCAGGTGGTGGT---GGAGGAGG---TGGTG---GGGGAGGTGGTGCGAATGGTGGGAGTGGA
TGGGGTGGAGGGTCTGGATCGGGTGGAGGCTTAGGATATAGTGAAAGCGGTGGAGATTGGGGTAACAAGTGGAATTTCGC
CAAGGGGTCTGGAGGAGGAGGAGGAGCAGGCGGTGGGGGAGGATCAAAGGGTGGATCCGGGTCTGGTTTCGGATCTGGTT
CTGGTAGAGGGAGTGGTGTGAGTGGCTCTGCATCAGCCCCTAGCGGCAATGGATACGCCAATGCTGATGGTAATGGCGGG
GGCGGGGGTAGTGGTGGGGGTGCAAATGGGTCTAGCGGAACTGGGGTTGGGTCTGGCCTTGGCAAGGGATATGGTGAGAG
TGGTGTGACAAAGGCACCGACTCCTGTTGCCGGTGGTGATGGTACCAGCTACTCAGATGCTGGTGGTAGTGGTAACGGGG
GTGGCGGCGGTAACAACGGAAATGGAGGTGGTGCCGGAGCTGGCGCTGGACAGGCCGGTAGCGACGCCACTTCTGGAGGC
TTTGCAAATGCAGGAGGAAGCGGCAATGGTGGTGGCGCAACCGGAAGTGTCGCTGAAGGTCCAAGCGTTGGAGTTGGATC
GGGTGCTGGGTCTGGCGCCGCTCAGACCGGTAGCACTGGCTCTTATGGCGAAGGCTATGCCACGGGAATGGGTGGTGGCA
TGGGTGGCGGCACCGGTGAGAGCCAGAATGGCGGAACTGGCAATGGTGGAGGCAGTGGATCGGGATCTGGTGGTGGCGGA
TACCACTAAATTATCCTTTC-TCAATCAAGATAGAACTTGGACCTCGACATGTATTTTAATTTCCATCATTTTACTAGCG
TTAC-ACATTGAAGGACATGGGGTGTGCACTAAAGGGACGATCCTGAGCATAGGTGGAGGGAACTAAATAGCATATTTTG
GATTTGCATTTAGCTCCTACAGCTGTTCAGGCGGGTTT-GTGCCAACAGACATAATAATAATGTGAAGGAGTACCTCCTT
TGCAGTTTTTTTCTATCTCGATAGTCAAATCACTTGATTCCGCCATTTTGTTTCCAATGCCTTTTTGAGTTTTGACCCAA
TTTACATGTTCAAGTATGTTTCTTG-------------------------TTTGCATACCCACGAGAGTATGCAAGTCTG
TGGTTTTTTAGAGCAATGCAAACCTCGACTTTGCTTTCTATTTAAAATAATCCCTTG-TGTTAAATTGG---GTTCGTTT
TTGAATCGGTATT-AACAAAATAGTTCCAATCTTAACCATCAACATAGAA------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>chr4A_799
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------CTAG----ATCGATATAGACAAAGTCAAAGGTACTACTGCCACTCTGATCATAGGAAACTTCTCATCGAATAA
CCCACTCAA--TACATAACTAAAAACGCTTGATCGGATCGCCTTAAGGTATCGCACCCATGCACGG-----CCTCCACCA
CTATATATAATCACCCAACCCTCTCTGCTCTCATCAGCACCCAACTCG----CCTCACTCAGCCGAGTCTCACTCACAAT
GGCTACTAGCACCAAGCTTGCAGCTCTCGGTTTTGTTGTCCTTGTGAGCATTGGGTTCACCGATGCCGCAAGGATGCTCG
GTAGCTCCTCCAGTGCTTCAGGTGGAGGGGGAGGTGGAGG---TGGCG---GGGGAGGCGGTGGGTCTGGTGGGAGTGGA
TATGGTGGAGGTTCTGGGTCAGGTGGAGGCTTAGGATATAGTGAGAGCGGTGGAGATTGGGGTAACAAGTGGAACTTCGC
CAAGGGATTTGGTGGAGGAGGAGGAGCTGGTGGTGGTGGAGGATCAAAGGGTGGATCCGGGTCTGGCTCCGGATTTGGCT
TCGGCACTGGCAGCGGTGCAAGTGGCTCCGCATTGGCCCCTAGCGGCAATGGTTATGCCAGTGCTGACGGTAAGGGCGGG
GGTGGTGGCGGAGGTGGTGGTGCAGATGGGTCTAGCGGAACCGGGACTGGATCTGGCCTTGGCAAGGGGTATGGTGAGAG
TGGTGTGTCAAAGGCACCGGCTCCTGTTGCTGGTGGTGATGGTACCAGCTACTCTGATGCTGGCGGTAGTGGTAACGGTG
GTGGTGGTGGTAACAACGGAAATGGAGGTGGTGCCGGCGCTGGCGCTGGACAGGCTGGTAGCGACGACACTTCTGGAGGC
TTTGCAAATGGGGGAGGAAGCGGCAATGGTGGCGGCGCAACTGGAGATGTCGCTGACGGTCCAAGTGTTGGAGTTGGATC
TGGTGCTGGGTCTGGCGCTGCTCAGACCGGTAGCACTGGCTCTTATGGCGAAGGCTATGCCACGGGAATGGGCGGTGGCA
TGGGTGGTGGCAGTGGTGAAAGCCAAAATGGCGGAACTGGAAGTGGCGGAGGCAGTGGATCCGGATCTGGTGGTGGCGGA
TACCACTAAATTACCCTTTA-TTGAAAAAGCTAGAA-TGGGAACTCGACATGTATTTTAATCTCCGTCATTTTACTAGCA
CTTC-GCATCAGAGGGCATGTGGCATGCAAGGAAGGGATGATCCTGAATGCCGGTGGAAGGAGCTAAATAGCATTTCTGG
GATTAACATTTAATTCC-AC--CTATTCAGGCAGGTTT-GTGCCAATAGGCATAATAATGATGTGAAGGAGTAGCTCCTT
TGTAGCC-TTTTCTATCTCAATAGTCAAATTGCTTGATTCCATCGTTTTGTTTGCAATGTCTTT----------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>chr5B_799
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------CTAG----ATCG--ATATATACAGTCAACGGTACTGTTGGCATTATGATCATAGGAAACTTCTCATCGAATAA
CCCACTCATACTCCACAACCAACAGAGCTCGATCGGATCACCGTAAGATATATCACCCATGCACTGCATCCCCTCCAGCA
CTATATATACCTAGCCAACCCTCTCTGCTCT---CAGCACCTAACTCG----TCTCACTCCACCCAG-CTCACTCACAAT
GGCTACCCCCACCAAGCTTGCAGCTCTTGGCTTTGTTGTCCTTGTGAGCATTGGGTTTGCCGATGCTGCAAGGATGCTCG
CTAGCTCCTCCAGTGCCTCAGGTGGTGGT---GGTGGCGGGGGAGGCGGC------GGCGGTGCGTCTGGTGGGAGTGGG
TTTGGTAGAGGGTCTGGGTCAGGTGGCGGCTTAGGATATGGTGAGAGTGGTGGAGATTGGGGTAACAAGTGGAACTTTGC
CAAGGGATCTGGTGGAGGGGGAGGAGCTGGTGGCGGAGGAGGATCAAAGGGTGGATTTGGGTCTGGTTCCGGATCTGGCT
ATGGCTCTGGTAGCGGTGTGAGTGGCTCTGCGTCAGCCCCTAGTGGCAATGGTTATGCCAATGCTGATGGTATGGGTGGG
GGCGGGGGCGAAGGTGGTGGTGCAAATGGGTCTAGTGGAACTGGAGTTGGATCTGGCCTTGGCAAGGGATATGGTGAGAG
TGGTGTGTCAAACGCACCAGCTCCTGTTGCCGGTGGTGATGGTACCAGCTACTCTGATGCTGGCGGCAGTGGTAACGGTG
GTGGTGGCGGTAACAACGGAAATGGAGGTGGTGTGGGCACTGGCGCTGGACAGGCCGGCAGCGATGACACTTCTGGAGGC
TTTGCGAATGGAGGAGGAAGTGGCAATGGTGGTGGCGCAACTGGAGGTGCCGCTGAAGGCCCAAGCGTTGGAGTTGGATC
TGGTGCTGGGTCTGGCGCCGGTCAGACCGGTAGCACTGGCTCTTATGGCGAAGGCTATGCTACAGGAATTGGTGGTGGCA
TGGGTGGCGGCAATGGTGAGACCCAGAATGGGGGAACTGGCAGTGGTGGAGGCAGTGGATCCGGATCTGGTGGTGGCGGA
TACCACTAAATTGCCTTTTG-TTGAGCAAGCTAGAA-TTGGACCTGGATATGTATTTTAATTTCCATCATTTTGCTAGCA
TTTC-ACATCAAAGGACACATTGCATGCATGGAAGGGATGATCTTGAGCGTCAGTGGAAGGAACTAAATATCATTTCTTG
GATTA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>chr5D_799
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------CTAG----ATCG--ATATATAGAGTCAACTGTACTACTGCCACACTGATCATAGGAAACTTCTCATCGAATAA
CCCACTCAA--TGCACAACCAAAAGCGCTAGATCGGATC--CGTAAGATACCGC-CCCACGCACGG-----TCTCCACCA
CTATATATAATCACCCAACCCTCCCTACTCT---CAGCACCCAACTAG----TCTCACTCAGCCGAGCCTCACTCACAAT
GGCCACTAGCACTAAGCTTGCAGCTCTTGGCTTTGTTGTCCTTGTGAGCATTGGGTTCGCCGATGCAGCAAGGATGCTAG
CTAGCTCCTCCAGTGCTTCGGGTGGTGGT---GGAGGAGG---TGGAG---GGGGAGGCGGTGCGAATGGTGGGAGTGGA
TATGGTGCAGGTTCTGGGTCAGGTGGAGGCTTAGGATATAGTGAGAGCGGCGGAGATTGGGGTAAGAAGTGGAACTTCGC
CAAGGGATTTGGTGGAGGAGGAGGAGCTGGTGGTGGCGGAGGATCAAAGGGTGGATCCGGGTCTGGTTCCGGATCCGGCT
TCGGCACTGGCAGCGGCGCGACTGGCTCCGCATCGGCCCCTAGCGGTGATGGTTATGCTAGTGCTGATGGTAAGGGTGGA
GGCGGCGGCGGAGGTGGCGGTGCAAACGGATCTAGCGGAACCGGAGCCGGAGATGGCCTTGGCAAGGGATATGGTGAGAG
TGGCGTGTCAAAGGCACCGGCTCCTGCTGCCGGTGGCGATGGTACTAGCTACTCTGATGCTGGCGGTAGTGGTAACGGTG
GTGGAGGCGGTAACAACGGAAATGGAGGTGGTGCCGGCGCTGGCGCTGGACAGGCCGGCAGCGACGACACTTCTGGAGGC
TTTGCAAATGGAGGAGGAAGCGGCAACGGTGGTGGCGCAATTGGAGGTGGCGCTGAAGGTCCTAGCGTTGGGGTTGGATC
TGGTGCTGGGTCTGGCGCCGGTCAGACCGGTAGCACTGGCTCTTATGGCGATGGATATGCCACGGGAATGGGCGGTGGCA
TGGGTGGCGGCACCGGTGAGAGCCAGAATGGCGGAACTGGCAGCGGTGGAGGTAGTGGATCCGGATCAGGTAGTGGAGGA
TACAACTAAACTACCCTTTA-TTGAACAAGCAAGAA-CGGGACCTTCACATGTATTTTAATTTCCATCATTTTACTAGTA
TTTC-A-ATCAAAGGACATGTGGCATGCACTAAGGGGA------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>chr5B_801
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------AG----ATCAATATAGACAAAGTCAAAGGTACTACTGCCACTCTGATCATAGGAAACTTCTCATCGAATAA
CCCACTCAA--AGCATAACCAAAAACGCTCGATCGGATCGCCTTAAGGTGTCGCACCCATGCACGG-----CCTCCACCA
CTAC--ATAATCACCTAACCCTCCCTGCTCT---CAGCACCCAACTCG----CCTCACTCAGCCCAGTCTCACTCACAAT
GGCTACTAGCACCAAGCTTGCAGCTCTTGGCTTTGTTGTCCTTGTGAGCATTGGGTTCGCCGATGCCGCAAGGATGCTCG
CTAGTTCCTCCAGTGCTTCAGGTGGAGGG---GGAGGCGGAGGTGGCG---GGGGAGGCGGTGCATCTGGTGGGAGTGGA
TATGGTTCAGGTTCTGGGTCAGGTGGAGGCTTAGGATATAGTGAGAGCGGCGGAGATTGGGGTAAGAAGTGGAACTTTGC
CAAAGGATTTGGTGGAGGAGGAGGAGCTGGTGGTGGCGGAGGATCAAAGGGCGGATCCGGGTCTGGTTCCGGATCCGGCT
TTGGCACTGGCAGCGGTGCGACTGGCTCCGCGGCGGCCCCTAGCGGCAATGGTTATGCTAGTGCCGATGGTAAGGGCGGA
GGTGGCGGCGGAGGTGGCGGTGCAAACGGATCTAGCGGAACCGGATCAGGAGATGGCCTTGGCAAGGGATATGGTGAGAG
TGGCGTATCAAAGGCACCGGCTCCTGATGCCGGTGGCGATGGTACCAGCTACTCTGATGCCGGCGGTAGTGGCAACGGTG
GTGGCGGCGGTAACAACGGAAATGGAGGTGGTGCCGGCGCTGGCGCTGGACAGGCCGGTAGCGACGACACTTCTGGAGGC
TTTGCAAATGGAGGAGGAAGCGGCAATGGTGGTGGCGCAACTGGAGGTGTCGCTGAAGGTCCAAGTGTTGGAGTTGGATC
TGGTGCTGGGTCTGGCGCCGGTCAGACCGGTAGCACTGGCTCTTATGGCGAAGGATATGCCACTGGAATGGGCGGTGGCA
TGGGTGGCGGCACTGGTGAGAGCCAGAATGGCGGAACTGGCAGCGGTGGAGGTAGTGGATCCGGATCAGGTAGTGGAGG-
--CCACTAAACTACTCTTTA-TTGAGCAAGCAAGAG-CCGGACCTTCGCATGTATTTTAATTTCCATCATTTTACTAGTA
TTT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>chr5D_808
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------TATATATAGTCAACGGTACTGCTGGCATTATGATCATAGGAAACTTCTCATCGAATAA
CCCACTCATACTGCACAACCAACAGAGCTCGATCGGATCACCGTAAGATATGTCACCAATGCACTGCATCCCCTCCAGCA
CTATATATACCTAGCCAACCCTCTCTGCTCT---CAGCACCCAACTCG----TCTCACTCCACCCAG-CTCACTCACAAT
GGCTACCCCCACCAAGCTTGCAGCTCTTGGCTTTGTTGTCCTTGTGAGCATTGGGCTTGCCGATGCTGCAAGGATGCTCG
CTAGCTCCTCCAGTGCCTCAGGTGGTGGT---GGTGGCGGGGGAGGCGGC------GGCGGTGCGTCTGGTGGGAGTGGA
TTTGGTAGAGGGTCTGGGTCAGGTGGCGGCTTAGGATATGGTGAGAGTGGTGGAGATTGGGGTAACAAGTGGAACTTTGC
CAAGGGATCTGGTGGAGGGGGAGGAGCTGGTGGCGGAGGAGGATCAAAGGGTGGATCTGGGTCTGGTTCCGGATCCGGCT
ATGGCTCTGGTAGCGGTGTGAGTGGCTCTGCGTCAGCCCCTAGTGGCAATGGTTATGCCAATGCTGATGGTATGGGCGGG
GGCGGGGGCGAAGGTGGTGGTGCAAATGGGTCTAGTGGAACCGGAGTTGGATCTGGCCTTGGCAAGGGATATGGTGAGAG
TGGTGTGTCAAACGCACCGGCTCCTATTGCCGGTGGTGATGGTACTAGCTACTCTGATGCTGGCGGTAGTGGTAACGGTG
GTGGTGGCGGTAACAACGGAAATGGAGGTGGTGTGGGCGCTGGTGCTGGACAGGCCGGCAGCGACGACACTTCTGGAGGC
TTTGCAAATGGAGGAGGAAGTGGCAATGGTGGTGGTGCAACTGGAGGTGCCGCTGAAGGCCCAAGCGTTGGAGTTGGATC
TGGTGCTGGGTCTGGCGCCGGTCAGACCGGTAGCACTGGCTCGTATGGCGAAGGCTATGCTACAGGAATTGGTGGTGGCA
TGGGTGGCGGCAATGGTGAGACCCAGAATGGTGGAACTGGCAGTGGTGGAGGCAGTGGATCCGGATCTGGTGGTGGCGGA
TACCACTAAATTGCCCTTTG-TTGAGCAAGCTAGAA-TTGGACCTGGATATGTATTTTAATTTCCATCATTTTGCTAGTA
TTTC-ACATCAAAGGACACATGGCATGCATGGAAGGGATGATCTTGAGCATCGGTGGAAGGAACTAAATATCATTTCTTG
GATTAACATTTAACTCCTAC--CTGTTCAGGCAGGTTT-GTGCCAATAGACATA-------TGTGAAAGAGTACCTCATT
TGTAGCC-TTTTTTACCTCAAATAGTCAATTGCTTGATTCTGTCGTTTTGTTTGCAATGTCTTT----------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
-----------------------S---S---------------------------S--------S------------S--
-----------------------------------S---------------------S----------------------
-----------------------------------------------------S--SS----------------------
---SSSS--------------------------------------S----------------------------------
----------------------------------------------------S--------S--SS--------------
-----------------------------------------------S------------S-------------------
------------------------------------------------------------S-------------------
--------------------------------------------------------------------------------
--------------------------S-----------------------------------------------------
--------------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
-----S-----------S--------------------------------------------------------------
---------------S--S---------S--------------------------S------------------------
-------------------S------------------------------------------S-----------------
-----------------------------------------------------------------------S--------
------S-------------------------------------------------------------------------
-------------------------------------------------------------------S--S---------
----------------------------------------------------S---------------------------
----------------------S-----------------S---------------------------------------
-------SS-------S-----S-----S------------------S---------------------------S----
-----------------------------------S------------------------------------------S-
------------S---S---------------------------------------------------------------
-----------------------------------------------------------------------S--------
------------------------------------------------------------------------SSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_807
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-------------------------------------------------------------------TACATGCTGTCTG
CGGCTAG-------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>reverse_2838
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------ACGCATGCAGTTCCAGGTAA-----------------------
-------------------------------------------------------------------------------
