>input_sequence_66151
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--------ATGTCGACGAGCTCGACCAACTCCGCCGAGTCCCCGGCCGTGTCCGGCCTCGACTACGACGACACCGCCCTC
ACCCTCGCCCTCCCCGGCTCCTCCGCCGACGACCGCAAGCGCGCCCACCACGACGAGCACGACAAGCCTCCCTCCCCAAA
GTACGCAGCCTTCTC----CTACCTTCCCCGTCTCTCGCACGTCGCACGAC---GAGCTGGTCATGTATATACATAGTCT
TGTGTTTTGTGGATGGTTTCTGACCTGGTCCGTGCGATGATCGACTGACAGAGCGCGCGCTGTGGGGTGGCCTCCGGTGC
GGGCTTACCGGCGCAACGCGCTGCGCGAGGAGGGCGCGTGCAAGCTCGTGAAGGTGGCCGTGGATGGCGCCCCCTACCTG
CGCAAGGTGGACCTCGCCGCGCACGACGGATACGAGGCCCTGCTCCGCGCGCTCCACGGCATGTTTGCCCCGTGCCTCGC
CGTCCGTGGCGAAGGCGAGCTCGGGAGCAGGCTCGTGGACGCGGCCACCGGCACCGAGTACGTGCCCACCTACGAGGACA
GGGACGGCGACTGGATGCTCGTTGGAGATGTCCCCTGGAAGTAAGCAAATCAAACTTCTTGCCATAGTTCTTGCAGATTT
AAGGTTTCCCCGACCAAATGTGCTAATCTGATTCAAATCATGTCAATGCAGGATGTTCGTCGAGTCCTGCAAGCGGATCC
GACTCATGAAGAGCTCCGAGGCCGTCAACCTAGGTAAGGAGCCAATAGTCTAAGATCATGTCCTACAGCTACAATCAGCG
TCTGACAAATGAAGATGAACACGCACAAACACATCCTATAAGTACCAAGTTACTAACGTCTCCTCTTAATTTGTT-----
-TGACGCAGCTCCAGGAGCATCTTCCGAATGA------------------------------------------------
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>chr7B_1_TraesCS7B01G256100
ATGATATTGATTTCGTATTGTGAAGGTTTATAGTTTTT-TCTATAAATTCGGTCAAACTTTACGAAGTTTGACTTCAGAC
AAATCTTATATACGAAGTAAAAAGGACCAGAGGGAGTATGAAAGAAATCTTGGATTTAGATATTAGCATGAACTATGCAT
CTGAAAAGTTCCGCAAAAAAAAATCTGCGGATTTGTACTTTGCTCTTCTCTTCTTCTACTATGATCACATGCAGTTCACT
TGCATGGTTTGAAAAAAAAA-TGTGCAAAGAACTAGTAAACGAGAATCCAAAGCTAAAAATGCATGTTCATTGAGTTTGT
TTTCTCTGCATAAGCCACAAGAATACAAAACTTTGTATGGAACTTTAAATCTTACCTGATCAATCATTAACATGTGTGGA
TGATTTGTGAACTTCCCGAAATGATGGCAAATGTTTATCTATGCTAGGAGACGGCGCTCCCGGACTCGTTTGCTAGTTGA
ACAACCGTCTCTTTTATTCACTGGATTCCCTTCATGGTACTACTCGAATGA-GGTATTTTCTTCCTGTGAAAACACAACA
AAAATGTTGCTCAAATTCAA----------GCCAATAAAAGAGAC--GACAACATCAACCACTACAGGTGGAAATGCACC
CTGCTGCAATGCGAGAAACCTGCACCCACCA-GGACATGCATTATAC---TACACAAAGAAAATTATGAGCATCTAGCCG
AATAATAATTGTGTCTAAACATATATGCCAAAAGAAAAAAACTATGGAAAACAAAGAGTGAAGAAACAGGCAAGTCGGCA
GCAGGTGGGCAAGTGGCGTACCTTTATAGGCAGCATCCGCGCGGCCACATCCCACCCATCCTCCTCCTCATAGCCTC---
---CTCTCCCACGGCACACCACACCAGCGACCGACGACGCACCGCACAACC----AGCCGATGACAGCTAGCTAGCGACC
GCGCATCAAC--------------CAACGATCGCCGGAGCCCCGCCGAAGCAGCTTGGGAGCTCA-----AACAACGCGC
ACACGCCGATGTCGACGAGCTCGACCAACTCCGCCGAGTCCCCGGCCGTGTCCGGCCTCGACTACGACGACACCGCCCTC
ACCCTCGCCCTCCCCGGCTCCTCCGCCGACGACCGCAAGCGCGCCCACCACGACGAGCACGACAAGCCTCCCTCCCCAAA
GTACGCAGCCTTCTC----CTACCTTCCCCGTCTCTCGCACGTCGCACGAC---GAGCTGGTCATGTATATACATAGTCT
TGTGTTTTGTGGATGGTTTCTGACCTGGTCCGTGCGATGATCGACTGACAGAGCGCGCGCTGTGGGGTGGCCTCCGGTGC
GGGCTTACCGGCGCAACGCGCTGCGCGAGGAGGGCGCGTGCAAGCTCGTGAAGGTGGCCGTGGATGGCGCCCCCTACCTG
CGCAAGGTGGACCTCGCCGCGCACGACGGATACGAGGCCCTGCTCCGCGCGCTCCACGGCATGTTTGCCCCGTGCCTCGC
CGTCCGTGGCGAAGGCGAGCTCGGGAGCAGGCTCGTGGACGCGGCCACCGGCACCGAGTACGTGCCCACCTACGAGGACA
GGGACGGCGACTGGATGCTCGTTGGAGATGTCCCCTGGAAGTAAGCAAATCAAACTTCTTGCCATAGTTCTTGCAGATTT
AAGGTTTCCCCGACCAAATGTGCTAATCTGATTCAAATCATGTCAATGCAGGATGTTCGTCGAGTCCTGCAAGCGGATCC
GACTCATGAAGAGCTCCGAGGCCGTCAACCTAGGTAAGGAGCCAATAGTCTAAGATCATGTCCTACAGCTACAATCAGCG
TCTGACAAATGAAGATGAACACGCACAAACACATCCTATAAGTACCAAGTTACTAACGTCTCCTCTTAATTTGTT-----
-TGACGCAGCTCCAGGAGCATCTTCCGAATGATCACCAGGCACGGTTGATCTGCCTGGACTTGATTTCAGAAGGTGTGCA
ATGGAAGAGGCTTGGCTGATCAGGTCCTCCATGTACCTATACAGTAGGATATAAACATATACCAGTGATGTGCTGTACTT
GTCAAGTAGTTTTGTTCTTAGTTTCTTCCATGTTTCGATCGGCTTCTTCATGTT-CGCCGTTGCGACAGGTCACGTACGG
CCTTGTGGTTGTGGGCAAGGGACATATCACATCTGCACGGTACATGTTGGTGCTGTTGTTGTTAGACTCTTGTGCCTTGC
TGCACTGTAAGGTCACGAGATT-TACGAGTACAATCTCTGTCATTTCTTTCTGTCGCGACTTTAGCTGCCTGCCTGCCTG
CCTCTGTTTGTGCCATCTTTCCATCAA-------TGCTGCAGTACTAGTACGTGCTGTGTCTTGTTCTTTTGGTTGGGAA
CTCTGGTCTTGTTTGGGTCGACAGATGGTGATTGCTGTGGAAACCAGTGGCAGTGGGAATCTATGTG-TTGGACAATTTG
GCACCGAAGGAAACAGCGCAGAAACTCAACTAATAGTGCAACTGAAAGGTCCAGTTGC----TCTGCTTAACTTGCGCCA
GGTGCCTCTGTCGTAAGAGTATTTTCTTTTACCTTGAAGTTCAGCTAGCCCCTCAACCTAAAATCTTGGCAATAGTAACA
TGTTTATTATTGCCTTAATTCATGAAGAAAATTAGATTTGTGCGACTCCGAAGTTCATATTTTGTAGATACGTAACTATA
AAACCATTGCAAAGTGGCATGGTTTGCTGCCAAGAGGACCCAATATGGTCTTCACAAACGCCGCTCACTGAGGATAGTTA
TCATCAGCAAGGTAGTACTCATTGTTGTAGTTGTGTCCGTTGATAGTGTAGGCTTTAGAGCAGTCGTGTGCCAGCGAGTC
TATCTCGGATTAGAACTCCTCCATTAGATCAACCCTTGATGTTCAGAATGTTCTCCACTTCCCTCTCCATTTCCTCCTGG
ATGTTT
>chr7D_1
ATGATATTGATTTCGTATTGTGAAGGTTTATATTTTTTTTCTATAAATTTGGTCAAACTTTACGAAGTTTGACTTCAGAG
AAATCTTATATACGAAATAAAAACGACCAGAGGGAGTACGAAAGAAATCTTGGATTTAGATATTAGCATGAACTATGCAT
TTGAAAAGTTCCGTAAAAAAAA---TGCGGATTTGTACTTTGTTCTTTTCTTC---------GATCACATGCAGTTCACT
TGCATGGTTTGAAAAAAAAAGTGTGCAAAGAACTAGTAAACGAGAATTCAAAGCTAAAAATGCATGTTCATTGAGTTTGT
TCTCTTTGCATAGGCCACAAGAATACAAAACTTTGTATGAAACTTTAAATCTTACCTGATCAATCATTGACATGTGTGGA
TGATTTGTTAACTTTCCGAAATGATGGCAAATGTTTATCTATGCTAGGAGCCGGCGATCCCGGACTCGTTTGCTAGTTGA
ACAACCGTCTCTTTTATTCACTGGATTCCCTTCCTGCTACTACTCGAATGA-GGTATTTTCTTCTTGTGAAAACACAACA
AAAATGTTGCTCAAATTCAA----------GCCAATAAAAGAGAC--GACAACATCAACCACTACAGGTGGAAATGCACC
CTGC-------------------ACCCACCA-AGACATGCATTACACTCATACACAAAGAAAATCATGAGCATCTAGCCG
AATAATAATTGTGTCTAAATATATGTGCAAAATC-------CTATGGAAAACGAAGAGTGAAGAAACATGCAAGTCGGCA
GCAGGTGGGCAAGTGGCGCACCTTTATAGGCAGCATCCGCGCGGCCACATCCCAGCCATCCTCCTCCTCCTCATATCCTC
CTTCTCTCCCACGGCACACCACACCAGCGACCGACGACGCACCGCACAACC----AGCCGACGACAGCTAGCTAGCGACC
GCGCATCAACCGACC----------AACGATCGCCGGAGCCCGGCCGAAGCAGCTTGGGAGCTCA-----AGCGACGCGC
ACACGCCGATGTCGACGAGCTCGACCAACTCCGCCGAGTCCCCGGCCGTGTCCGGCCTCGACTACGACGACACCGCCCTC
ACCCTCGCCCTCCCCGGCTCCTCCGCCGACGACCGCAAGCGCGCCCACCACGACGAGCACGACAAGCCTCCCTCCCCAAA
GTACGCGGCCTTCTC----CTACCTTCCCCGTCTCTCGCACGTCGCACGACGAGGAGCTGGTCATGTATATACATAGTCT
TGTGTTTTGTGGATGGTTTCTGACCTGGTACGTTCGATGATTGACTGACAGAGCGCGCGCTGTGGGGTGGCCTCCGGTGC
GGGCTTACCGGCGCAACGCGCTGCGCGAGGAGGGCGCGTGCAAGCTCGTGAAGGTGGCCGTGGATGGCGCCCCCTACCTG
CGCAAGGTGGACCTCGCCGCGCACGGCGGGTACGAGGCCCTGCTCCGCGCGCTCCACGGCATGTTCGCGCCGTGCCTCGC
CGTCCGTGGCGAAGGCGAGCTCGGGAGCAGGCTCGTGGACGCGGCCACCGGCGCCGAGTACGTGCCCACCTACGAGGACA
GGGACGGCGACTGGATGCTCGTTGGAGACGTCCCCTGGAAGTAAGCAAATCAAACTCCTTGCCATAGTTCTTGCAGATTT
AAGGTTTCCCCGACCAAATGTGCTAATCTGATTCAAATCATGTCAATGCAGGATGTTCGTCGAGTCCTGCAAGCGGATCC
GACTCATGAAGAGCTCCGAGGCCGTCAACCTAGGTAAGGAACCGATAATCTAAGATCATGTCCTACAACTACAATCAGCA
TCTGACAAATGAAGATGAACACGCACAAACACATCGTACAAGTACCAAGTTACTAACGT---CTCTTAATTTGTT-----
-TGACGCAGCTCCAAGACCATCTTCCTAATGATCACCAGGCACGGTTGATCTGCCTGGACTTGATT-CAGAAGGTGTGCA
ATGGAAGAGGCTTGGCTGATCAGGTCCTCCATGTACCTATACAGTAGGATATAAACATATACCAGTGATGTGCTGTACTT
GTCAAGTAGATTTGTTCTTAGTTTCTTCCATGTTTCGATCGGCTTCTTCATGTT-CGCCGTTGCCACAGGTCACGTACAG
TCTTGTGGTTGTGGGCAAGGGACATATCACATCTGCACGGTACATGTTGGTGCTGTTGTTGTTAGACTCTTGTGCCTTGC
TGCACTGTAAGGTCACGAGATT-TACAAGTACAATCTCTGTCATTTCTTTCTGTCGCGACTTTAGCTGCCTGCCTGCCTG
CCTCTGTTTGTGCCATCTTTCCATCAA-------TGCTGCAGTAGTAGTACGTGCTGTGTCTTGTTCTTTTGGTTGGGAA
CTCCGGTCTTGTTTGGGTCAACAGATGGTGATTGCTGTGGATACCAGTGGCAGTGGGAATCTATGTG-TTGGACAATTTG
GCACCGAAGGAAACAGCGCAGAAACTCAACTAATAGTGCAACTGAAAGGTCCAGTTGC----TCTGCTAAACTTGCGCCA
GGTGCCTCTGTCGTAAGAGTATTTTCTTTTACCTTGAAGTTCAGCTAGCCCCTCAACCTAAAATCTTGGCAACAGTAACA
TGTTTATTATTGCCTTAATTCATGAAGAAAATTAGATTTATGCAACTCCCAAGTTCATATTTTGTAGATACGTAACTATA
AAACCATTGCAAAGTGGCATTGGTTGCTGCCAAGAGGATCGAATATGGTCTTCACAAACGCCGCTCACTGAGGATAGTTA
TCATCAGCAAGGTAGTACTCACTGTTGTAGTTGTGTCCGTTGACAGTGTAGGCTTTAGAGCAGTCGTGTGTCAGCGAGTC
TATCACGGTTTAGAACTCCTCCCTTAGATCAGCCCTTGATGTTCAGAATGTGCTCCACTTCCCTCTCCATTTCTTCCTGG
ATGTTT
>chr7A_484
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-----CGTCTCTTACATTAACTGGATTCCCTTCATGCTACTACTCAAATAAGGGTTTTTTCTTCTTAAAACTGAG----A
AAAATGTTAGTCAAATTTATAAGCCTTGTTGCCAATAAAAGAGACTCGACAACATCAACCACTACAGGTGGAAATGCACC
CTGCTGCAATGCAAGAAATCTGCACCCACGGGAGACATGCAC---AC---TACACAAATAAAATTATGAGCATCTAGCCG
ACTAATAATTGTGTCTAAATATATATGCAAAAAGAAT-----TATGGAAGCCGAAGAGTGAAGAAACGGGCAAGTCAGCA
GCAGGTGGGCAAGTGGCGCACCTTTATAGGCAGCATCCGCGCGGCCACATCCCACCCATCCTCCTCCTCCTCATATCCTC
CTTCTCTCCCACGGCACACCACGCCAGTGACCGACGACGCACCGCACAACCAACCAGCCGACGAGAGCCAGCTAGCGACC
GCGCATCAACCGACCGACTCGCGCCAGCGATCGCCGGAGTCCGGCCGAAGCAGCCTGGGAGCTCAGCTCAAGCAGCGCGC
GCAAGCAGATGTCGACGAGCTCGACCAACTCCGCCGAGTCCCCGGCCGTGTCCGGCCTCGACTACGAAGACACCGCCCTC
ACCCTCGCCCTCCCCGGCTCCTCCTCCGACGACCGCAAGCGCGCCCACCACGACGAGCACGACAAGCCGCCCTCCCCAAA
GTACGCGGCCTTCTCTCTCCTGCCCTCCCCGCCTCTCGGACGTCGCACGGC---GAGCTGGTCATGTG--TACGTAGTCT
TGTGTCTTGTGGATGGTTTCTGACCTGGTGCGTGCGATGATTGACTGACAGAGCGCGCGCTGTGGGGTGGCCTCCGGTGC
GGGCTTACCGGCGCAACGCGCTGCGGGAGGAGGGCGCGTGCAAGCTCGTGAAGGTGGCCGTGGACGGCGCCCCCTACCTG
CGCAAGGTGGACCTCGCCGCGCACGGCGGGTACGAGGTGCTGCTCCGCGCGCTCCACGGCATGTTCGCCCCGTGCCTCGC
CGTCCGCGGCGAGGGCGAGCTCGGGAGCAGGCTCGTGGACGCGGCCACCGGCGCCGAGTACGTGCCCACCTACGAGGACA
GGGACGGCGACTGGATGCTCGTTGGAGACGTCCCCTGGAAGTAAGCAAATCAATCCCCTAGCCATAGTTCTTGCAGATTT
GAGGTTTCCGCGAACATATGTGCTAATCTGATTCAAATCTTGTCAATGCAGGATGTTCGTCGAGTCCTGCAAGCGGATCC
GCCTCATGAAGAGCTCCGAGGCCGTCAACCTAGGTAAGGAACCAACAATCTAAGATCATGTCCTACAACTACCATCAGCA
TCTGA---------------------------------TAAGTACCAAGTTACTAACGT---CTCCTCTTAATTTATCTG
ATGATGCAGCTCCAAGACCATCTTCCCAATGATCACCAGGCACGGTTGAACTGCCTGGATTTGATTTCAGAAGGTGTGCA
ATGGAAGAGGCTTGGCTGATCAGGTCCTCCATGTACCTATACAGTAGGATATAAACATATACCAGTGATGTACTGTACCT
GTCAAGTAGATTTGTTCTTAGTTTCTTCCATGTTTCGATCGGCTTCTTCATGTTTCGCCATTGCCATAGGGAGGCCACGG
CCTTGTGGTTGTCGGCAAGGGACATATCGCATCTGCACGGTACATGTTGGTGCTGTTGTTGTTAGACTCTTGTGCCTTGC
TGCACTGTAAGGTCACGAGACAATACGAGTACAATCTCTGTCATTTCTTTCTGTCTCAACTTTAG--------CTGCCTG
CCTCTGTTTGTGCCATCTTTCCCATCAATGCTGCTGCAGTAGTAGTAGTACGTGCTGTGTCTTGTTCTTTTGGTTGGGAA
CTCTGGTCTTGTTTTGGTCGACAGATGGTGATTGCTGTGGAAACCAGTGGCAGTGGGAATCTATGTGCTTGGACAATTTG
GCACTCAAGTAAACAGCGCAGAAACTCAACTAACAGTGCAACTGAAAGGTCCAGTTGCTCGATCTGCTTAACTTGCGCCA
GGTGCCCCTGTCGTAAGATTTTCTCCTTTTA-------------------------------------------------
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>SNPs
--------------------------------S----------------S-----------------------------S
----------------S------S--------------S-----------------------------------------
S------------S--------SSS-----------------S----S-----SSSSSSSSS------------------
-----------------------------------------------S--------------------------------
-S---S------S--------------------------S----------------------------S-----------
--------S-----S-----------------------------------S-----S-----------------------
------------------------------------S---------------------------S---------------
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------------S-----S-------------S-----------S-----------------------------------
-------------------S--------S-------SSSSS-----------S---------------------------
------------------S--------------------------------------------------S-SSSS-----
-------------------------------------------------------------S------------------
------------------------------------------S----------------------------S--------
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------S-------------------------------------------------------------------------
-----------------------------S-----------S--------------------------------------
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-------------------------S---S-----------------------------------S--------------
----------------------------------------------------S---------------------------
----------------------------S---------------------------S-----------------------
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----------------------------------------S------S-------------------S-----------S
-----------------------------------S-----------------------SSS------------------
--------------S--S--------S-----------------------------------------------------
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---------S------------------------------------------------------S---------------
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--------------------------------------------S-----------------------------------
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------------------------------------------------------------------------S-------
---------------------------------------S---S-----S------------------------------
--------------------S-S---------------S-S---------------------------------------
---------------------S---------------------S--------------------------S---------
----S---S-------------S--------S-------------------S---------------------S------
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>forward_659
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-------------------------------------------------------------------------------C
CTGCTGCAATGCGAGAAAC-------------------------------------------------------------
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>reverse_1947
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--------------------------GAATGATCACCAGGCACGGT----------------------------------
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>forward_1935
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---------------------------------------------------------------------------TTTGT
TTGACGCAGCTCCAG-----------------------------------------------------------------
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>reverse_2932
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---------------------------------------------------TCTCCACTTCCCTCTCCATT---------
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